AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038336

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038336.t1 MTR_5g091450 78.298 811 73 8 1 727 1 792 0.0 1225
MS.gene038336.t1 MTR_5g091180 50.830 783 209 11 7 700 7 702 0.0 655
MS.gene038336.t1 MTR_5g091430 51.252 599 174 10 189 727 10 550 2.62e-175 513
MS.gene038336.t1 MTR_5g091530 60.313 383 114 4 93 437 2 384 3.82e-144 427
MS.gene038336.t1 MTR_5g091550 52.778 468 141 6 53 449 20 478 1.35e-142 427
MS.gene038336.t1 MTR_5g091550 52.220 473 141 6 53 449 20 483 6.97e-142 425
MS.gene038336.t1 MTR_5g091410 59.206 277 79 4 177 421 27 301 1.35e-93 302
MS.gene038336.t1 MTR_5g091410 51.852 270 92 5 495 727 281 549 1.40e-61 216
MS.gene038336.t1 MTR_5g086700 51.130 354 104 8 175 463 533 882 1.43e-89 304
MS.gene038336.t1 MTR_5g086700 68.027 147 44 2 30 176 41 184 1.02e-57 213
MS.gene038336.t1 MTR_5g086700 51.130 354 104 8 175 463 533 882 1.49e-89 304
MS.gene038336.t1 MTR_5g086700 68.027 147 44 2 30 176 41 184 1.05e-57 213
MS.gene038336.t1 MTR_3g079840 53.145 318 87 6 175 433 528 842 2.68e-85 292
MS.gene038336.t1 MTR_3g079840 65.986 147 49 1 30 176 34 179 2.63e-57 211
MS.gene038336.t1 MTR_3g079840 53.145 318 87 6 175 433 529 843 3.02e-85 292
MS.gene038336.t1 MTR_3g079840 65.986 147 49 1 30 176 35 180 2.74e-57 211
MS.gene038336.t1 MTR_1g041240 45.763 295 100 6 175 409 528 822 5.59e-66 237
MS.gene038336.t1 MTR_1g041240 52.318 151 70 2 31 181 36 184 1.54e-43 170
MS.gene038336.t1 MTR_1g041240 45.763 295 100 6 175 409 530 824 5.86e-66 237
MS.gene038336.t1 MTR_1g041240 52.318 151 70 2 31 181 38 186 1.61e-43 170
MS.gene038336.t1 MTR_1g041240 45.763 295 100 6 175 409 529 823 6.12e-66 237
MS.gene038336.t1 MTR_1g041240 51.974 152 71 2 30 181 36 185 1.64e-43 170
MS.gene038336.t1 MTR_7g107200 40.945 127 73 2 52 176 13 139 2.40e-26 112
MS.gene038336.t1 MTR_1g042160 34.921 126 81 1 52 176 13 138 1.33e-25 108
MS.gene038336.t1 MTR_4g123750 32.796 186 110 6 42 217 9 189 4.50e-22 98.2
MS.gene038336.t1 MTR_4g123750 29.630 135 92 2 45 177 169 302 1.10e-12 70.1
MS.gene038336.t1 MTR_1g073790 38.095 126 73 3 52 176 62 183 4.16e-21 99.4
MS.gene038336.t1 MTR_1g073800 34.756 164 89 5 27 176 13 172 5.71e-21 97.1
MS.gene038336.t1 MTR_1g044450 38.095 126 73 3 52 176 65 186 7.75e-21 98.6
MS.gene038336.t1 MTR_7g107160 33.824 136 77 4 53 177 131 264 6.28e-16 81.3
MS.gene038336.t1 MTR_8g011730 28.378 148 92 4 32 176 4 140 8.75e-16 80.1
MS.gene038336.t1 MTR_3g106700 30.370 135 84 2 52 176 406 540 1.56e-15 81.6
MS.gene038336.t1 MTR_3g106700 29.365 126 85 3 55 176 71 196 9.44e-15 79.0
MS.gene038336.t1 MTR_8g006190 35.398 113 67 2 70 176 10 122 2.24e-15 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038336.t1 AT3G11910 41.243 354 138 8 175 463 526 874 2.15e-65 235
MS.gene038336.t1 AT3G11910 53.374 163 75 1 16 178 18 179 4.51e-50 190
MS.gene038336.t1 AT3G11910 41.243 354 138 8 175 463 526 874 2.15e-65 235
MS.gene038336.t1 AT3G11910 53.374 163 75 1 16 178 18 179 4.51e-50 190
MS.gene038336.t1 AT3G11910 41.243 354 138 8 175 463 527 875 2.26e-65 235
MS.gene038336.t1 AT3G11910 53.374 163 75 1 16 178 19 180 4.78e-50 190
MS.gene038336.t1 AT3G11910 41.243 354 138 8 175 463 527 875 2.26e-65 235
MS.gene038336.t1 AT3G11910 53.374 163 75 1 16 178 19 180 4.78e-50 190
MS.gene038336.t1 AT5G06600 42.210 353 135 8 175 463 529 876 2.64e-64 231
MS.gene038336.t1 AT5G06600 54.237 177 69 3 12 177 5 180 5.30e-52 195
MS.gene038336.t1 AT5G06600 42.210 353 135 8 175 463 529 876 5.52e-64 231
MS.gene038336.t1 AT5G06600 53.933 178 70 3 12 178 5 181 6.61e-52 195
MS.gene038336.t1 AT5G06600 42.210 353 135 8 175 463 528 875 6.39e-64 231
MS.gene038336.t1 AT5G06600 61.074 149 56 2 31 178 33 180 9.69e-52 195
MS.gene038336.t1 AT3G58250 46.094 128 66 2 52 176 10 137 7.07e-29 118
MS.gene038336.t1 AT3G58370 44.882 127 68 1 52 176 9 135 1.43e-27 114
MS.gene038336.t1 AT3G58270 45.238 126 68 1 52 177 8 132 3.50e-27 114
MS.gene038336.t1 AT3G58270 45.238 126 68 1 52 177 8 132 3.50e-27 114
MS.gene038336.t1 AT3G58270 45.238 126 68 1 52 177 8 132 3.50e-27 114
MS.gene038336.t1 AT3G58410 40.000 125 71 2 52 176 8 128 1.11e-25 108
MS.gene038336.t1 AT3G58210 31.818 220 130 4 52 262 8 216 1.39e-25 108
MS.gene038336.t1 AT3G27040 36.957 138 85 1 52 187 9 146 1.16e-23 101
MS.gene038336.t1 AT2G01790 37.500 168 91 4 54 207 10 177 2.60e-23 100
MS.gene038336.t1 AT3G58340 28.899 218 139 5 52 261 8 217 7.93e-22 97.8
MS.gene038336.t1 AT3G58340 33.333 156 96 3 52 205 8 157 1.87e-21 96.3
MS.gene038336.t1 AT2G05410 37.500 136 81 3 55 187 11 145 1.90e-21 96.3
MS.gene038336.t1 AT3G58260 33.758 157 96 3 53 201 9 165 3.68e-21 95.5
MS.gene038336.t1 AT3G58350 35.433 127 80 1 52 176 8 134 3.86e-21 95.1
MS.gene038336.t1 AT3G58350 35.433 127 80 1 52 176 8 134 3.86e-21 95.1
MS.gene038336.t1 AT3G58410 38.400 125 59 3 52 176 29 135 8.25e-21 94.7
MS.gene038336.t1 AT3G17380 33.333 168 105 4 43 203 12 179 1.22e-20 94.0
MS.gene038336.t1 AT3G58360 35.862 145 90 2 52 194 8 151 1.40e-20 93.6
MS.gene038336.t1 AT5G43560 40.476 126 70 3 55 180 73 193 2.30e-20 97.1
MS.gene038336.t1 AT5G43560 40.476 126 70 3 55 180 73 193 2.30e-20 97.1
MS.gene038336.t1 AT3G58290 32.432 185 103 6 52 220 11 189 2.36e-20 92.4
MS.gene038336.t1 AT1G04300 38.889 126 72 3 52 176 69 190 1.42e-19 94.7
MS.gene038336.t1 AT5G52330 36.508 126 75 3 55 180 23 143 1.44e-19 92.0
MS.gene038336.t1 AT5G52330 36.508 126 75 3 55 180 23 143 1.44e-19 92.0
MS.gene038336.t1 AT5G52330 36.508 126 75 3 55 180 23 143 1.44e-19 92.0
MS.gene038336.t1 AT3G58220 34.109 129 77 4 53 176 13 138 7.03e-19 90.5
MS.gene038336.t1 AT2G05420 36.620 142 80 3 55 187 12 152 7.77e-19 88.2
MS.gene038336.t1 AT3G58220 34.109 129 77 4 53 176 13 138 9.83e-19 89.0
MS.gene038336.t1 AT3G58220 34.109 129 77 4 53 176 13 138 1.21e-18 89.0
MS.gene038336.t1 AT3G58220 34.109 129 77 4 53 176 13 138 2.15e-18 87.4
MS.gene038336.t1 AT3G58220 34.109 129 77 4 53 176 13 138 2.23e-18 86.3
MS.gene038336.t1 AT1G04300 37.313 134 71 4 52 176 69 198 6.27e-18 89.4
MS.gene038336.t1 AT1G31390 36.441 118 73 1 52 167 8 125 1.23e-17 84.0
MS.gene038336.t1 AT1G04300 40.741 108 59 3 70 176 68 171 4.50e-17 86.7
MS.gene038336.t1 AT3G58400 34.677 124 78 2 73 194 24 146 6.59e-17 82.4
MS.gene038336.t1 AT3G44790 35.507 138 83 2 52 187 5 138 7.09e-17 82.8
MS.gene038336.t1 AT4G09780 39.259 135 77 3 52 183 214 346 3.70e-16 82.0
MS.gene038336.t1 AT3G58200 31.579 114 78 0 52 165 8 121 4.54e-16 80.5
MS.gene038336.t1 AT3G44800 33.077 130 83 1 52 181 5 130 2.32e-15 78.6
MS.gene038336.t1 AT4G09770 38.519 135 78 3 52 183 160 292 2.46e-15 77.8
MS.gene038336.t1 AT4G09770 38.519 135 78 3 52 183 160 292 2.46e-15 77.8
MS.gene038336.t1 AT4G09770 38.519 135 78 3 52 183 186 318 3.15e-15 77.8
MS.gene038336.t1 AT5G26260 29.457 129 86 3 70 194 82 209 1.07e-14 76.6
MS.gene038336.t1 AT2G25320 29.054 148 94 3 52 189 404 550 2.36e-14 77.8
MS.gene038336.t1 AT2G25320 26.190 126 89 3 55 176 75 200 3.41e-14 77.4
MS.gene038336.t1 AT2G25320 29.054 148 94 3 52 189 405 551 2.40e-14 77.8
MS.gene038336.t1 AT2G25320 26.190 126 89 3 55 176 76 201 3.62e-14 77.4
MS.gene038336.t1 AT2G25320 26.190 126 89 3 55 176 76 201 4.53e-14 77.0
MS.gene038336.t1 AT2G25320 29.054 148 94 3 52 189 405 551 4.94e-14 76.6
MS.gene038336.t1 AT3G58240 29.333 150 101 2 52 201 8 152 6.16e-14 73.9
MS.gene038336.t1 AT4G09780 36.986 146 76 5 52 183 214 357 8.83e-14 74.7
MS.gene038336.t1 AT1G31400 31.724 145 92 3 52 192 8 149 1.63e-13 72.0
MS.gene038336.t1 AT2G25330 26.923 130 83 4 55 176 50 175 5.30e-13 73.2
MS.gene038336.t1 AT2G25330 31.852 135 82 2 52 176 359 493 1.66e-11 68.2
MS.gene038336.t1 AT2G42460 35.075 134 82 3 53 184 10 140 6.25e-13 70.9
MS.gene038336.t1 AT3G29580 32.540 126 81 3 52 175 8 131 1.21e-12 70.1
MS.gene038336.t1 AT2G04170 29.032 124 80 3 70 185 29 152 3.97e-11 65.1
MS.gene038336.t1 AT2G04170 29.032 124 80 3 70 185 29 152 3.97e-11 65.1
MS.gene038336.t1 AT3G58280 31.731 104 65 3 75 176 31 130 4.47e-11 65.1
MS.gene038336.t1 AT5G26280 29.730 111 74 2 70 176 100 210 4.86e-11 65.5
MS.gene038336.t1 AT5G26280 29.730 111 74 2 70 176 81 191 4.95e-11 65.5
MS.gene038336.t1 AT3G20370 33.846 130 80 3 52 176 218 346 6.30e-11 65.1
MS.gene038336.t1 AT3G20370 33.846 130 80 3 52 176 240 368 6.47e-11 65.5
MS.gene038336.t1 AT2G04170 29.032 124 80 3 70 185 111 234 9.62e-11 64.7

Find 129 sgRNAs with CRISPR-Local

Find 387 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTTAATCTCATCAATTT+TGG 0.133844 5.4:+72318322 None:intergenic
CTTAACAAGCTTAAATAAAT+TGG 0.174133 5.4:-72319749 MS.gene038336:CDS
CAGCTCAATTCCAGCGCTTT+TGG 0.197378 5.4:-72320681 MS.gene038336:CDS
TCCACGGTGTTGGGAGTTTC+AGG 0.198166 5.4:+72324009 None:intergenic
GGACCATTTGTCCATGTATT+TGG 0.218747 5.4:-72323625 MS.gene038336:CDS
CCCTTTCTTGTTCATTGAAT+TGG 0.231596 5.4:+72322756 None:intergenic
TCTTCATCCGATGGAGAAAA+AGG 0.245749 5.4:+72319210 None:intergenic
CCATGAGTGCAGTTAGAAAA+TGG 0.257433 5.4:-72319466 MS.gene038336:intron
ATCTTGGTCAGTGCTCTTCT+TGG 0.258512 5.4:+72318484 None:intergenic
TTGTGAAGAGCTGGCTTTGC+TGG 0.266249 5.4:+72318900 None:intergenic
TCCGTCACATTGTTCCCTTT+TGG 0.282535 5.4:+72323645 None:intergenic
TCCAATTCAGTTTGCGCCTC+CGG 0.296644 5.4:+72318197 None:intergenic
CCTTCAATGCTTCATTATCT+TGG 0.301042 5.4:+72318468 None:intergenic
TTTCGATTCATATGGAGAAT+TGG 0.310405 5.4:-72323958 MS.gene038336:CDS
AGCAAATACACAAATCAAAA+TGG 0.312364 5.4:+72318134 None:intergenic
CCTCCCTACGCAACTGCTTC+AGG 0.312763 5.4:-72318726 MS.gene038336:CDS
TTCGATTCATATGGAGAATT+GGG 0.320118 5.4:-72323957 MS.gene038336:CDS
GCTGGTACCTTCATCATTAG+TGG 0.337647 5.4:+72319083 None:intergenic
ATTCAGATGTATTTGAAGTT+GGG 0.347725 5.4:-72323903 MS.gene038336:CDS
TCCTGATGTGCGTTCATACT+TGG 0.356835 5.4:-72319386 MS.gene038336:CDS
CCCTTCTATGGCAGTTATGC+TGG 0.357484 5.4:-72319810 MS.gene038336:intron
AGAAGGTCTACAGAATCTTC+AGG 0.363813 5.4:-72318166 MS.gene038336:CDS
GACCTCTTCTTGTCCTTTGA+CGG 0.368043 5.4:+72318766 None:intergenic
AATGTTAATTTCTTGTCAAC+AGG 0.368724 5.4:+72319569 None:intergenic
AAGCAGTTGCGTAGGGAGGC+TGG 0.371713 5.4:+72318730 None:intergenic
CCCGGAGGCGCAAACTGAAT+TGG 0.373000 5.4:-72318198 MS.gene038336:CDS
ACAAGAAGAGGTCTCAAAAC+TGG 0.378335 5.4:-72318756 MS.gene038336:CDS
CTTCACCGTTTCGATTCATA+TGG 0.380481 5.4:-72323966 MS.gene038336:CDS
CCAAGATAATGAAGCATTGA+AGG 0.382695 5.4:-72318468 MS.gene038336:CDS
CAAGAGAGTTGCGTTGTGTT+TGG 0.385406 5.4:+72318399 None:intergenic
CAATGAACAAGAAAGGGATT+GGG 0.391490 5.4:-72322750 MS.gene038336:CDS
ATGCGTGTCAGCGGCCGAAA+TGG 0.391617 5.4:+72320625 None:intergenic
TATTCAGATGTATTTGAAGT+TGG 0.397400 5.4:-72323904 MS.gene038336:CDS
AGATGAAGACCTTGCAAAAC+AGG 0.401155 5.4:-72322161 MS.gene038336:CDS
CCAATTCAGTTTGCGCCTCC+GGG 0.402649 5.4:+72318198 None:intergenic
AATCAAAGATGAAGAATCAT+TGG 0.415099 5.4:-72319187 MS.gene038336:CDS
GGCTGACTATCCACGGTGTT+GGG 0.419784 5.4:+72324000 None:intergenic
TCAATGAACAAGAAAGGGAT+TGG 0.426035 5.4:-72322751 MS.gene038336:CDS
ACGATACATATCGTCCATTT+CGG 0.428342 5.4:-72320639 MS.gene038336:CDS
CATCCAAATACATGGACAAA+TGG 0.437660 5.4:+72323622 None:intergenic
CATCAATATCTTTCAAGTCT+AGG 0.439397 5.4:+72318869 None:intergenic
ACCAATTCAATGAACAAGAA+AGG 0.439765 5.4:-72322757 MS.gene038336:CDS
TAAAGTTCAATCTCTTCATC+AGG 0.447128 5.4:+72319715 None:intergenic
TCCAAGTATGAACGCACATC+AGG 0.466295 5.4:+72319385 None:intergenic
GTCAGTGCTCTTCTTGGCCG+AGG 0.467488 5.4:+72318490 None:intergenic
TGAAGAGATTGAACTTTATG+AGG 0.473021 5.4:-72319710 MS.gene038336:intron
TCTCCTTTCATCTTTGCTAC+CGG 0.477039 5.4:+72324237 None:intergenic
CTGACACGCATTGAGGAAGC+AGG 0.478145 5.4:-72320613 MS.gene038336:CDS
TTCACTTCCTTCATACGTCT+CGG 0.481263 5.4:-72322725 MS.gene038336:CDS
CAGCTAATTTGCCCAATGGT+TGG 0.482354 5.4:-72323590 MS.gene038336:CDS
AATTGCATGATCTTCGTAAA+GGG 0.483893 5.4:-72322700 MS.gene038336:CDS
ACAAGCTTAAATAAATTGGC+TGG 0.484761 5.4:-72319745 MS.gene038336:CDS
CCAATTCAATGAACAAGAAA+GGG 0.492931 5.4:-72322756 MS.gene038336:CDS
TTCAGATGTATTTGAAGTTG+GGG 0.498270 5.4:-72323902 MS.gene038336:CDS
TGCATAACTACTCCAACCAT+TGG 0.500693 5.4:+72323578 None:intergenic
GAGAGTTGCGTTGTGTTTGG+TGG 0.502859 5.4:+72318402 None:intergenic
TCTTTGATTTCTTCATCCGA+TGG 0.512081 5.4:+72319201 None:intergenic
TGTAGCTCAACAGTTAAAAG+TGG 0.515848 5.4:-72319115 MS.gene038336:CDS
AGGCTGACTATCCACGGTGT+TGG 0.518166 5.4:+72323999 None:intergenic
GGAATATGTGCACAATCTCC+AGG 0.518923 5.4:-72319365 MS.gene038336:intron
AAATTGCATGATCTTCGTAA+AGG 0.521351 5.4:-72322701 MS.gene038336:CDS
GCATAACTACTCCAACCATT+GGG 0.523533 5.4:+72323579 None:intergenic
AATGAACAAGAAAGGGATTG+GGG 0.524524 5.4:-72322749 MS.gene038336:CDS
CAATCTCAGCATTCCGTCAA+AGG 0.525036 5.4:-72318779 MS.gene038336:CDS
TTTGGAAGTGGAGCATGGAC+CGG 0.526588 5.4:-72320094 MS.gene038336:intron
TTGTGTTTGGTGGTTTGTGA+GGG 0.534784 5.4:+72318412 None:intergenic
CTTAATTTCAGGAGAAGCAA+TGG 0.535426 5.4:+72324201 None:intergenic
AGCAGTTGCGTAGGGAGGCT+GGG 0.540158 5.4:+72318731 None:intergenic
AAGCTTGTTAAGATTTCTGA+TGG 0.540451 5.4:+72319760 None:intergenic
AACGGTGAAGAATCTTTGAC+AGG 0.545138 5.4:+72323979 None:intergenic
CAATTTACCGAGACGTATGA+AGG 0.547085 5.4:+72322718 None:intergenic
GTTGGGAGTTTCAGGTTGAA+CGG 0.548965 5.4:+72324017 None:intergenic
GAAGGTCTACAGAATCTTCA+GGG 0.550028 5.4:-72318165 MS.gene038336:CDS
CAGGATTGATTGATGGAAGC+CGG 0.553225 5.4:-72324256 None:intergenic
TTGCCAATACCCAAAAGCGC+TGG 0.557699 5.4:+72320671 None:intergenic
CAAAGATGAAGAATCATTGG+AGG 0.557950 5.4:-72319184 MS.gene038336:CDS
CAAAAGCGCTGGAATTGAGC+TGG 0.558135 5.4:+72320682 None:intergenic
GTCTTGAACATCCAAATACA+TGG 0.558257 5.4:+72323614 None:intergenic
TGATATTATATGCTTTCAGA+AGG 0.562815 5.4:-72319443 MS.gene038336:CDS
GACTCAGCTAATTTGCCCAA+TGG 0.564019 5.4:-72323594 MS.gene038336:CDS
ATAGAGACCGCTCACAATGA+AGG 0.568030 5.4:-72318925 MS.gene038336:CDS
GCTGGAACCTTCATTGTGAG+CGG 0.569556 5.4:+72318918 None:intergenic
ATGAACGCACATCAGGATAA+CGG 0.571343 5.4:+72319392 None:intergenic
ACTCCTGAAGCAGTTGCGTA+GGG 0.572958 5.4:+72318723 None:intergenic
AAAAGAAAGATAACACATAG+AGG 0.574625 5.4:-72324178 MS.gene038336:intron
TCGATTCATATGGAGAATTG+GGG 0.576395 5.4:-72323956 MS.gene038336:CDS
AACATGTACTCTGTGAGAAG+AGG 0.577282 5.4:-72323522 MS.gene038336:intron
GAAGACCTTGCAAAACAGGT+TGG 0.580445 5.4:-72322157 MS.gene038336:CDS
TCGGCCGCTGACACGCATTG+AGG 0.585685 5.4:-72320620 MS.gene038336:CDS
ATTCTCCATATGAATCGAAA+CGG 0.586743 5.4:+72323961 None:intergenic
TCAGGAGAAGCAATGGTAGG+AGG 0.587719 5.4:+72324208 None:intergenic
TTCTATGGCAGTTATGCTGG+AGG 0.588738 5.4:-72319807 MS.gene038336:intron
TTTGATCATTAGCGAGACGA+TGG 0.588794 5.4:+72318249 None:intergenic
ATTAACATTTCAAGAAAGTG+AGG 0.589285 5.4:-72319555 MS.gene038336:intron
TGAATTGGAAAGTCATGAGA+AGG 0.590278 5.4:-72318183 MS.gene038336:CDS
AACTCCTGAAGCAGTTGCGT+AGG 0.591168 5.4:+72318722 None:intergenic
ATTTCAGGAGAAGCAATGGT+AGG 0.596105 5.4:+72324205 None:intergenic
GCCAACAATTCAAAATTCGT+CGG 0.598812 5.4:-72319057 MS.gene038336:CDS
ACAGTTAAAAGTGGACATAG+AGG 0.599638 5.4:-72319106 MS.gene038336:CDS
ATAGAGGCCACTAATGATGA+AGG 0.600160 5.4:-72319090 MS.gene038336:CDS
AAATACACAAATCAAAATGG+AGG 0.601137 5.4:+72318137 None:intergenic
GCAGGTTGGAGAACTGAAAG+TGG 0.602124 5.4:-72320151 MS.gene038336:intron
AATTAATGATATGATACTTG+AGG 0.602906 5.4:-72319019 MS.gene038336:CDS
TTCCGTCAAAGGACAAGAAG+AGG 0.603943 5.4:-72318768 MS.gene038336:CDS
GTTGTGTTTGGTGGTTTGTG+AGG 0.604368 5.4:+72318411 None:intergenic
AATACACAAATCAAAATGGA+GGG 0.608058 5.4:+72318138 None:intergenic
CCCAAAAGGGAACAATGTGA+CGG 0.610722 5.4:-72323646 MS.gene038336:CDS
AAGTGTTGAAGAGAAAATCC+CGG 0.614365 5.4:-72318216 MS.gene038336:CDS
CCTTCACAATAGTGTTGAGA+AGG 0.614803 5.4:+72318549 None:intergenic
TGACACGCATTGAGGAAGCA+GGG 0.624439 5.4:-72320612 MS.gene038336:CDS
ACAGGCTCACACAAGACAGT+TGG 0.628095 5.4:+72319587 None:intergenic
TCGTAGACTATGACAAAGTG+AGG 0.630356 5.4:-72322114 MS.gene038336:CDS
CCTTCTCAACACTATTGTGA+AGG 0.632483 5.4:-72318549 MS.gene038336:CDS
CGATTCATATGGAGAATTGG+GGG 0.632598 5.4:-72323955 MS.gene038336:CDS
TCTCGTCAATTAGAACAAGT+TGG 0.633272 5.4:-72318584 MS.gene038336:CDS
AGAACTGAAAGTGGTAAACA+AGG 0.635246 5.4:-72320142 MS.gene038336:CDS
AGACACGGCTGAGCATATAA+CGG 0.637553 5.4:-72322618 MS.gene038336:intron
TCAGATGTATTTGAAGTTGG+GGG 0.638171 5.4:-72323901 MS.gene038336:CDS
AACTTGTTCTAATTGACGAG+AGG 0.641144 5.4:+72318586 None:intergenic
TTTGACAGGCTGACTATCCA+CGG 0.642858 5.4:+72323993 None:intergenic
CCTGAAGCAGTTGCGTAGGG+AGG 0.643484 5.4:+72318726 None:intergenic
GCTTCCTCAATGCGTGTCAG+CGG 0.654810 5.4:+72320616 None:intergenic
TTGACGAGAGGTGAACGCGT+CGG 0.655338 5.4:+72318598 None:intergenic
AAGCCGGTAGCAAAGATGAA+AGG 0.663136 5.4:-72324240 MS.gene038336:CDS
TATTGATGCTATGATAGATG+AGG 0.684819 5.4:-72318854 MS.gene038336:CDS
CAATGTGGATGAGAAAGACA+CGG 0.694173 5.4:-72322633 MS.gene038336:CDS
ACCTGAAACTCCCAACACCG+TGG 0.703492 5.4:-72324010 MS.gene038336:CDS
AGTTGAAGTAACATGCAATG+TGG 0.732861 5.4:-72322648 MS.gene038336:CDS
TGTTGAAGAGAAAATCCCGG+AGG 0.793807 5.4:-72318213 MS.gene038336:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATAAAGATATAAAAGA+AGG + chr5.4:72322092-72322111 None:intergenic 10.0%
!!! CTTTATTAAGATTTTTTTTA+GGG + chr5.4:72320472-72320491 None:intergenic 10.0%
!!! TAAAATAATTGTTTTCTATA+AGG + chr5.4:72321466-72321485 None:intergenic 10.0%
!!! TCTTTATTAAGATTTTTTTT+AGG + chr5.4:72320473-72320492 None:intergenic 10.0%
!!! TTTATTAAGATTTTTTTTAG+GGG + chr5.4:72320471-72320490 None:intergenic 10.0%
!! AAATCTTAATAAAGAAAAAC+CGG - chr5.4:72320478-72320497 MS.gene038336:intron 15.0%
!! AACATTATGAATATTATTTC+AGG + chr5.4:72318553-72318572 None:intergenic 15.0%
!! ACATTATGAATATTATTTCA+GGG + chr5.4:72318552-72318571 None:intergenic 15.0%
!! TAAATCAATAAGAAAACAAA+TGG + chr5.4:72322902-72322921 None:intergenic 15.0%
!! TATATATATATTCAAACTGT+AGG + chr5.4:72319332-72319351 None:intergenic 15.0%
!! TGATAATAAAAAATATTCTC+AGG - chr5.4:72320201-72320220 MS.gene038336:intron 15.0%
!!! GATTTGTTATATAATTTATG+AGG - chr5.4:72321580-72321599 MS.gene038336:intron 15.0%
!!! GTACTTTATTAAGTTTTATT+AGG + chr5.4:72320449-72320468 None:intergenic 15.0%
!! AAAGCACAAAAATAAAGAAA+AGG - chr5.4:72320056-72320075 MS.gene038336:intron 20.0%
!! AATACATTTAGTATCAACTA+AGG + chr5.4:72322561-72322580 None:intergenic 20.0%
!! AATCTTAATAAAGAAAAACC+GGG - chr5.4:72320479-72320498 MS.gene038336:intron 20.0%
!! AATTAATGATATGATACTTG+AGG - chr5.4:72323373-72323392 MS.gene038336:intron 20.0%
!! ACAAACAAAACAAATATCTA+GGG + chr5.4:72320128-72320147 None:intergenic 20.0%
!! ACAATAGAGATTAAATGTTA+CGG + chr5.4:72319943-72319962 None:intergenic 20.0%
!! ACTTCAAATCATAGATAAAT+TGG + chr5.4:72322190-72322209 None:intergenic 20.0%
!! ATTTAATGCACTTATTCAAA+AGG + chr5.4:72321340-72321359 None:intergenic 20.0%
!! CATTATGAATATTATTTCAG+GGG + chr5.4:72318551-72318570 None:intergenic 20.0%
!! CCTTTAATTAAACATCAAAA+AGG + chr5.4:72323058-72323077 None:intergenic 20.0%
!! CTTAACAAGCTTAAATAAAT+TGG - chr5.4:72322643-72322662 MS.gene038336:CDS 20.0%
!! CTTCATAATATAAATGTTAC+CGG + chr5.4:72322320-72322339 None:intergenic 20.0%
!! GGAAGAAAAAAAAATTAGAA+GGG + chr5.4:72318700-72318719 None:intergenic 20.0%
!! TAAAGTACAAATATCATATG+AGG + chr5.4:72320835-72320854 None:intergenic 20.0%
!! TACAAACAAAACAAATATCT+AGG + chr5.4:72320129-72320148 None:intergenic 20.0%
!! TATAAAAAATGACACTGTTT+CGG + chr5.4:72319858-72319877 None:intergenic 20.0%
!! TATAAAAATTCGAGATAGTA+CGG + chr5.4:72321365-72321384 None:intergenic 20.0%
!! TATGATAGGTAAATTATGAT+AGG - chr5.4:72321165-72321184 MS.gene038336:intron 20.0%
!! TGGAAGAAAAAAAAATTAGA+AGG + chr5.4:72318701-72318720 None:intergenic 20.0%
!! TTGGTTGAAAAATTTAAAGA+AGG - chr5.4:72323718-72323737 MS.gene038336:intron 20.0%
!!! AATCTACTATTTCATGTTTT+GGG - chr5.4:72321995-72322014 MS.gene038336:intron 20.0%
!!! AATTTAGGATAGAATATTCT+CGG + chr5.4:72320546-72320565 None:intergenic 20.0%
!!! AGCAGAATTAAAATTGTTTT+TGG - chr5.4:72322280-72322299 MS.gene038336:intron 20.0%
!!! ATCTTTAATCTCATCAATTT+TGG + chr5.4:72324073-72324092 None:intergenic 20.0%
!!! ATCTTTCTTTTCTTAATTTC+AGG + chr5.4:72318205-72318224 None:intergenic 20.0%
!!! ATTAAAATTGTTTTTGGAAG+TGG - chr5.4:72322286-72322305 MS.gene038336:intron 20.0%
!!! CCTTTTTGATGTTTAATTAA+AGG - chr5.4:72323055-72323074 MS.gene038336:intron 20.0%
!!! TGAAAATGCACATAATTTTT+GGG - chr5.4:72319564-72319583 MS.gene038336:CDS 20.0%
! AAAAGAAAGATAACACATAG+AGG - chr5.4:72318214-72318233 MS.gene038336:CDS 25.0%
! AAACACCACAAATATTCATA+TGG + chr5.4:72321544-72321563 None:intergenic 25.0%
! AAGAGATCTTATGAATTTAC+AGG + chr5.4:72321806-72321825 None:intergenic 25.0%
! AATCAAAGATGAAGAATCAT+TGG - chr5.4:72323205-72323224 MS.gene038336:intron 25.0%
! AATGTTAATTTCTTGTCAAC+AGG + chr5.4:72322826-72322845 None:intergenic 25.0%
! AATTGCCATATGAATATTTG+TGG - chr5.4:72321536-72321555 MS.gene038336:intron 25.0%
! AGAAAAAGGACAAGAATAAA+TGG + chr5.4:72323121-72323140 None:intergenic 25.0%
! AGTTCAGTAGAAAAGTTTAA+TGG + chr5.4:72319216-72319235 None:intergenic 25.0%
! ATTAACATTTCAAGAAAGTG+AGG - chr5.4:72322837-72322856 MS.gene038336:intron 25.0%
! ATTAACTGAAAAACTTGGAA+AGG + chr5.4:72318302-72318321 None:intergenic 25.0%
! ATTATATGAGAAGTTTGAAG+GGG + chr5.4:72321859-72321878 None:intergenic 25.0%
! CAATAGAGATTAAATGTTAC+GGG + chr5.4:72319942-72319961 None:intergenic 25.0%
! CATTATATGAGAAGTTTGAA+GGG + chr5.4:72321860-72321879 None:intergenic 25.0%
! CGTTACAAAGAAAAAACTAT+AGG + chr5.4:72322160-72322179 None:intergenic 25.0%
! CTTGAATTAACTGAAAAACT+TGG + chr5.4:72318307-72318326 None:intergenic 25.0%
! GAAAAAGGACAAGAATAAAT+GGG + chr5.4:72323120-72323139 None:intergenic 25.0%
! GACAAACTGCATTATTATAT+AGG - chr5.4:72322398-72322417 MS.gene038336:intron 25.0%
! GAGAATATTCTATCCTAAAT+TGG - chr5.4:72320545-72320564 MS.gene038336:intron 25.0%
! TAAAATCATGATGCTTTAGT+TGG - chr5.4:72321503-72321522 MS.gene038336:intron 25.0%
! TAACTTAGTGTACATTAACT+GGG + chr5.4:72322874-72322893 None:intergenic 25.0%
! TATCTCCTCTACTATTAAAA+GGG + chr5.4:72319268-72319287 None:intergenic 25.0%
! TATGGCTAGTAAATTATGAT+AGG - chr5.4:72321151-72321170 MS.gene038336:intron 25.0%
! TCAATCTATCTATATGTGTT+TGG - chr5.4:72320747-72320766 MS.gene038336:intron 25.0%
! TCATTATATGAGAAGTTTGA+AGG + chr5.4:72321861-72321880 None:intergenic 25.0%
! TGATATTATATGCTTTCAGA+AGG - chr5.4:72322949-72322968 MS.gene038336:intron 25.0%
! TGCTAATATATGTGATATGT+AGG - chr5.4:72321661-72321680 MS.gene038336:intron 25.0%
! TGTAATGAACAGACTAAATA+GGG + chr5.4:72318898-72318917 None:intergenic 25.0%
! TGTAGGCAACATAATTTATT+GGG + chr5.4:72321275-72321294 None:intergenic 25.0%
! TTAACATATGTTCTGGTAAA+CGG - chr5.4:72322531-72322550 MS.gene038336:intron 25.0%
! TTGTAATGAACAGACTAAAT+AGG + chr5.4:72318899-72318918 None:intergenic 25.0%
! TTGTAGGCAACATAATTTAT+TGG + chr5.4:72321276-72321295 None:intergenic 25.0%
! TTGTGATTTAACATATGTTC+TGG - chr5.4:72322524-72322543 MS.gene038336:intron 25.0%
!! ATCGAGCAAATCATTATTTT+AGG - chr5.4:72321435-72321454 MS.gene038336:intron 25.0%
!! ATTCAGATGTATTTGAAGTT+GGG - chr5.4:72318489-72318508 MS.gene038336:CDS 25.0%
!! CAATCTACTATTTCATGTTT+TGG - chr5.4:72321994-72322013 MS.gene038336:intron 25.0%
!! CTGAAAATGCACATAATTTT+TGG - chr5.4:72319563-72319582 MS.gene038336:CDS 25.0%
!! CTTTAGAAACATTCTGTTAA+CGG - chr5.4:72320150-72320169 MS.gene038336:CDS 25.0%
!! GAGCAAAACAAAAACATTTT+AGG - chr5.4:72323230-72323249 MS.gene038336:intron 25.0%
!! GATATTTGTACTTTATTTCG+AGG - chr5.4:72320840-72320859 MS.gene038336:intron 25.0%
!! TATTCAGATGTATTTGAAGT+TGG - chr5.4:72318488-72318507 MS.gene038336:CDS 25.0%
!! TTAATCTGAAATATTTGCAC+TGG - chr5.4:72319981-72320000 MS.gene038336:intron 25.0%
!! TTTATTCTTGTCCTTTTTCT+AGG - chr5.4:72323121-72323140 MS.gene038336:intron 25.0%
!!! ACTTTTTCATTTCTGATTGT+TGG - chr5.4:72321880-72321899 MS.gene038336:intron 25.0%
!!! CAAGTTTTTCAGTTAATTCA+AGG - chr5.4:72318305-72318324 MS.gene038336:CDS 25.0%
!!! CAATAATTTGTTTACCTTGT+GGG - chr5.4:72319104-72319123 MS.gene038336:CDS 25.0%
!!! GAGCGTTTTAAATATGTAAT+TGG + chr5.4:72320573-72320592 None:intergenic 25.0%
!!! GATGTCATTTAACATTTTCA+AGG - chr5.4:72320321-72320340 MS.gene038336:intron 25.0%
!!! GGTTTTCATATTGATTGTTT+TGG - chr5.4:72322132-72322151 MS.gene038336:CDS 25.0%
!!! TTCTCTTTCATTTTGTTTGA+TGG + chr5.4:72319535-72319554 None:intergenic 25.0%
!!! TTTGCTTTTAATTCCAGAAT+TGG + chr5.4:72318962-72318981 None:intergenic 25.0%
AAAATTTGTGGAAAGTTCCT+TGG - chr5.4:72320634-72320653 MS.gene038336:CDS 30.0%
AAATTGCATGATCTTCGTAA+AGG - chr5.4:72319691-72319710 MS.gene038336:intron 30.0%
AACATCAAAAAGGAAATACC+TGG + chr5.4:72323048-72323067 None:intergenic 30.0%
AAGGAGTAAAAAGCTAAATG+TGG + chr5.4:72320953-72320972 None:intergenic 30.0%
AATCTGAATCTTGTCAATTG+AGG - chr5.4:72320385-72320404 MS.gene038336:intron 30.0%
AATTGCATGATCTTCGTAAA+GGG - chr5.4:72319692-72319711 MS.gene038336:intron 30.0%
ACAAGCTTAAATAAATTGGC+TGG - chr5.4:72322647-72322666 MS.gene038336:CDS 30.0%
ACCAATTCAATGAACAAGAA+AGG - chr5.4:72319635-72319654 MS.gene038336:intron 30.0%
ACTGCATTGAAGTTAACTTT+AGG + chr5.4:72323751-72323770 None:intergenic 30.0%
AGATCACCTTTATAATAGTG+TGG + chr5.4:72320095-72320114 None:intergenic 30.0%
AGTTAGTTACTGGGTTAATT+AGG - chr5.4:72321237-72321256 MS.gene038336:intron 30.0%
ATAAAAGAAGGTAGTCGAAA+TGG + chr5.4:72322080-72322099 None:intergenic 30.0%
ATAAACAAAGCTAACATAGC+TGG + chr5.4:72322039-72322058 None:intergenic 30.0%
ATAACACATAGAGGTAATCA+AGG - chr5.4:72318223-72318242 MS.gene038336:CDS 30.0%
ATAAGGAATGTTAGCATTAG+AGG - chr5.4:72319290-72319309 MS.gene038336:intron 30.0%
ATACAAAAGCCATTGAAGTT+GGG - chr5.4:72321390-72321409 MS.gene038336:intron 30.0%
ATGACATACTTTGACAATGA+AGG + chr5.4:72321061-72321080 None:intergenic 30.0%
ATGTTGCCTACAAAAAAACT+GGG - chr5.4:72321283-72321302 MS.gene038336:intron 30.0%
ATTCTCCATATGAATCGAAA+CGG + chr5.4:72318434-72318453 None:intergenic 30.0%
CAAAAGACCAAAATAGATGT+TGG - chr5.4:72320681-72320700 MS.gene038336:CDS 30.0%
CACTGAAGTTATATACACAT+AGG + chr5.4:72318675-72318694 None:intergenic 30.0%
CCAATTCAATGAACAAGAAA+GGG - chr5.4:72319636-72319655 MS.gene038336:intron 30.0%
CCACAAGGTAAACAAATTAT+TGG + chr5.4:72319106-72319125 None:intergenic 30.0%
CTAAATGTATTTCCCTTCTA+TGG - chr5.4:72322570-72322589 MS.gene038336:intron 30.0%
CTATCTCCTCTACTATTAAA+AGG + chr5.4:72319269-72319288 None:intergenic 30.0%
CTCATTCTGATTTAAATTGC+AGG - chr5.4:72322223-72322242 MS.gene038336:intron 30.0%
GCAATTTAAATCAGAATGAG+AGG + chr5.4:72322223-72322242 None:intergenic 30.0%
GCAGTTTGTCAATCATATAT+AGG + chr5.4:72322388-72322407 None:intergenic 30.0%
GGAAAGAATACATATACAAG+TGG + chr5.4:72319247-72319266 None:intergenic 30.0%
GGTTAATTAGGTACTTAGTT+AGG - chr5.4:72321249-72321268 MS.gene038336:intron 30.0%
GTAACTTAGTGTACATTAAC+TGG + chr5.4:72322875-72322894 None:intergenic 30.0%
GTCTTACGTTGTAAAATAAG+AGG - chr5.4:72320361-72320380 MS.gene038336:intron 30.0%
GTTATATGATCCTGAAAAAG+AGG - chr5.4:72322479-72322498 MS.gene038336:intron 30.0%
TAAAGTTCAATCTCTTCATC+AGG + chr5.4:72322680-72322699 None:intergenic 30.0%
TAAGGAATGTTAGCATTAGA+GGG - chr5.4:72319291-72319310 MS.gene038336:intron 30.0%
TATATGTGATATGTAGGAAG+AGG - chr5.4:72321667-72321686 MS.gene038336:intron 30.0%
TATGTAATTGGCACCAATTT+AGG + chr5.4:72320561-72320580 None:intergenic 30.0%
TATGTTGCCTACAAAAAAAC+TGG - chr5.4:72321282-72321301 MS.gene038336:intron 30.0%
TATTGATGCTATGATAGATG+AGG - chr5.4:72323538-72323557 MS.gene038336:CDS 30.0%
TCAACACAACATAAATGAGA+GGG + chr5.4:72321952-72321971 None:intergenic 30.0%
TGAAGAGATTGAACTTTATG+AGG - chr5.4:72322682-72322701 MS.gene038336:CDS 30.0%
TGACATACTTTGACAATGAA+GGG + chr5.4:72321060-72321079 None:intergenic 30.0%
TTCAACACAACATAAATGAG+AGG + chr5.4:72321953-72321972 None:intergenic 30.0%
TTCAACCAAGTCTTCTTTAA+AGG + chr5.4:72323707-72323726 None:intergenic 30.0%
TTCGATTCATATGGAGAATT+GGG - chr5.4:72318435-72318454 MS.gene038336:CDS 30.0%
TTCTGATTTAAATTGCAGGT+TGG - chr5.4:72322227-72322246 MS.gene038336:intron 30.0%
TTTACTTGAATGATGTTTCG+TGG + chr5.4:72322363-72322382 None:intergenic 30.0%
TTTCGATTCATATGGAGAAT+TGG - chr5.4:72318434-72318453 MS.gene038336:CDS 30.0%
! ACTACAACCAACATCTATTT+TGG + chr5.4:72320691-72320710 None:intergenic 30.0%
! CATCAATATCTTTCAAGTCT+AGG + chr5.4:72323526-72323545 None:intergenic 30.0%
! CTTTTAATAGTAGAGGAGAT+AGG - chr5.4:72319267-72319286 MS.gene038336:intron 30.0%
! TATTGCCTTTAAAGAAGACT+TGG - chr5.4:72323699-72323718 MS.gene038336:intron 30.0%
! TCTTTCCCTTTTAATAGTAG+AGG - chr5.4:72319260-72319279 MS.gene038336:intron 30.0%
! TGTTTGATGGTAAATGCTAA+GGG + chr5.4:72319522-72319541 None:intergenic 30.0%
! TTCAAGTTAAGCCTAGAAAA+AGG + chr5.4:72323135-72323154 None:intergenic 30.0%
! TTCAGATGTATTTGAAGTTG+GGG - chr5.4:72318490-72318509 MS.gene038336:CDS 30.0%
! TTGTTTGATGGTAAATGCTA+AGG + chr5.4:72319523-72319542 None:intergenic 30.0%
!! AAGCTTGTTAAGATTTCTGA+TGG + chr5.4:72322635-72322654 None:intergenic 30.0%
!! ATCGACAAAGTTTTATCAGA+AGG - chr5.4:72323575-72323594 MS.gene038336:CDS 30.0%
!! CCAATAATTTGTTTACCTTG+TGG - chr5.4:72319103-72319122 MS.gene038336:CDS 30.0%
!! CTCTATTGTACTATTTCTGT+TGG - chr5.4:72319954-72319973 MS.gene038336:intron 30.0%
!! GTGTACTTATTTTCCCAAAA+GGG - chr5.4:72318733-72318752 MS.gene038336:CDS 30.0%
!! TCGACAAAGTTTTATCAGAA+GGG - chr5.4:72323576-72323595 MS.gene038336:CDS 30.0%
!!! ATTTCTGATTGTTGGCTTTT+AGG - chr5.4:72321888-72321907 MS.gene038336:intron 30.0%
!!! CAACATCTATTTTGGTCTTT+TGG + chr5.4:72320683-72320702 None:intergenic 30.0%
!!! CTTTTTTAGAACTCTTTCCA+AGG - chr5.4:72319493-72319512 MS.gene038336:intron 30.0%
!!! GAATTTTTTTTTCGCTGTTC+AGG - chr5.4:72323157-72323176 MS.gene038336:intron 30.0%
!!! TCTAAACCCAGTTTTTTTGT+AGG + chr5.4:72321292-72321311 None:intergenic 30.0%
AACTGGGTTTAGACTTTAGA+TGG - chr5.4:72321299-72321318 MS.gene038336:intron 35.0%
AATCGCATATGATAGGTAAC+CGG - chr5.4:72321213-72321232 MS.gene038336:intron 35.0%
AATGAACAAGAAAGGGATTG+GGG - chr5.4:72319643-72319662 MS.gene038336:intron 35.0%
ACAGTTAAAAGTGGACATAG+AGG - chr5.4:72323286-72323305 MS.gene038336:intron 35.0%
ACGATACATATCGTCCATTT+CGG - chr5.4:72321753-72321772 MS.gene038336:intron 35.0%
AGAACTGAAAGTGGTAAACA+AGG - chr5.4:72322250-72322269 MS.gene038336:intron 35.0%
AGATTGACAGTTCATCAATG+AGG + chr5.4:72320734-72320753 None:intergenic 35.0%
AGGCAGAAAAAATTGAGCTA+TGG + chr5.4:72320912-72320931 None:intergenic 35.0%
AGGGAAACAGAATGTCTTAT+AGG + chr5.4:72321041-72321060 None:intergenic 35.0%
AGTTAACTTCAATGCAGTCA+AGG - chr5.4:72323753-72323772 MS.gene038336:intron 35.0%
AGTTGAAGTAACATGCAATG+TGG - chr5.4:72319744-72319763 MS.gene038336:CDS 35.0%
ATAGTAGAGGAGATAGGATA+AGG - chr5.4:72319273-72319292 MS.gene038336:intron 35.0%
ATATATGCAGCACTATCAAG+AGG - chr5.4:72322111-72322130 MS.gene038336:CDS 35.0%
ATCGTGAAATCGCATATGAT+AGG - chr5.4:72321206-72321225 MS.gene038336:intron 35.0%
ATTAGCAAGTGTATTCACCA+AGG + chr5.4:72320654-72320673 None:intergenic 35.0%
CAAAGATGAAGAATCATTGG+AGG - chr5.4:72323208-72323227 MS.gene038336:intron 35.0%
CAATGAACAAGAAAGGGATT+GGG - chr5.4:72319642-72319661 MS.gene038336:intron 35.0%
CATCCAAATACATGGACAAA+TGG + chr5.4:72318773-72318792 None:intergenic 35.0%
CATGTTGAAAAGACCAATTC+TGG - chr5.4:72318946-72318965 MS.gene038336:CDS 35.0%
CCCTTTCTTGTTCATTGAAT+TGG + chr5.4:72319639-72319658 None:intergenic 35.0%
CCTTCAATGCTTCATTATCT+TGG + chr5.4:72323927-72323946 None:intergenic 35.0%
CTAAACTTTCCCAACTTCAA+TGG + chr5.4:72321402-72321421 None:intergenic 35.0%
CTAGATAGAATCGACTAAGT+AGG + chr5.4:72318615-72318634 None:intergenic 35.0%
CTTAATTTCAGGAGAAGCAA+TGG + chr5.4:72318194-72318213 None:intergenic 35.0%
GAGATTGAACTTTATGAGGT+TGG - chr5.4:72322686-72322705 MS.gene038336:CDS 35.0%
GATACAAAAGCCATTGAAGT+TGG - chr5.4:72321389-72321408 MS.gene038336:intron 35.0%
GATTAAATGTTACGGGCAAA+TGG + chr5.4:72319935-72319954 None:intergenic 35.0%
GCCAACAATTCAAAATTCGT+CGG - chr5.4:72323335-72323354 MS.gene038336:intron 35.0%
GCGTAAAATTTGAATGAGCA+AGG + chr5.4:72319194-72319213 None:intergenic 35.0%
GGTTCTATCATGTTGTACTT+GGG - chr5.4:72320768-72320787 MS.gene038336:intron 35.0%
GTCTTGAACATCCAAATACA+TGG + chr5.4:72318781-72318800 None:intergenic 35.0%
TAGACTTTAGATGGAGAGTT+AGG - chr5.4:72321308-72321327 MS.gene038336:intron 35.0%
TCAATGAACAAGAAAGGGAT+TGG - chr5.4:72319641-72319660 MS.gene038336:intron 35.0%
TCACCTCCACACTATTATAA+AGG - chr5.4:72320086-72320105 MS.gene038336:intron 35.0%
TCACCTTTATAATAGTGTGG+AGG + chr5.4:72320092-72320111 None:intergenic 35.0%
TCGATTCATATGGAGAATTG+GGG - chr5.4:72318436-72318455 MS.gene038336:CDS 35.0%
TCTCGTCAATTAGAACAAGT+TGG - chr5.4:72323808-72323827 MS.gene038336:intron 35.0%
TGAATTGGAAAGTCATGAGA+AGG - chr5.4:72324209-72324228 MS.gene038336:CDS 35.0%
TGCAATAGCTGACTAAACAT+AGG + chr5.4:72319812-72319831 None:intergenic 35.0%
TGTAGCTCAACAGTTAAAAG+TGG - chr5.4:72323277-72323296 MS.gene038336:intron 35.0%
TTAACCCAGTAACTAACTAC+CGG + chr5.4:72321235-72321254 None:intergenic 35.0%
TTTCCATCGAGTGATGATTA+TGG - chr5.4:72321133-72321152 MS.gene038336:intron 35.0%
! AACTTGTTCTAATTGACGAG+AGG + chr5.4:72323809-72323828 None:intergenic 35.0%
! ACCTTCAATTTTCTTGCAAG+GGG - chr5.4:72321007-72321026 MS.gene038336:intron 35.0%
! ACTTAGTCGATTCTATCTAG+TGG - chr5.4:72318615-72318634 MS.gene038336:CDS 35.0%
! AGATGTTGGTTGTAGTGATA+AGG - chr5.4:72320695-72320714 MS.gene038336:CDS 35.0%
! AGCAAAAGAATTTTCCCACA+AGG + chr5.4:72319121-72319140 None:intergenic 35.0%
! CACCTTCAATTTTCTTGCAA+GGG - chr5.4:72321006-72321025 MS.gene038336:intron 35.0%
! CTTCAATGGCTTTTGTATCT+CGG + chr5.4:72321388-72321407 None:intergenic 35.0%
! GGAAAGATACTAGTTTAGCA+AGG + chr5.4:72319166-72319185 None:intergenic 35.0%
! GTCTTTTCAACATGAATGCA+TGG + chr5.4:72318940-72318959 None:intergenic 35.0%
! TCAGATGTATTTGAAGTTGG+GGG - chr5.4:72318491-72318510 MS.gene038336:CDS 35.0%
! TCTTTGATTTCTTCATCCGA+TGG + chr5.4:72323194-72323213 None:intergenic 35.0%
! TGGTTCTATCATGTTGTACT+TGG - chr5.4:72320767-72320786 MS.gene038336:intron 35.0%
! TTCAGCGTTTTTGTCAACAT+TGG + chr5.4:72323426-72323445 None:intergenic 35.0%
! TTCCACAAATTTTGCAAGCT+GGG + chr5.4:72320627-72320646 None:intergenic 35.0%
! TTTCCACAAATTTTGCAAGC+TGG + chr5.4:72320628-72320647 None:intergenic 35.0%
!! AAGTGTTGAAGAGAAAATCC+CGG - chr5.4:72324176-72324195 MS.gene038336:intron 35.0%
!! ATGACATCTGCTTTTGAACA+TGG + chr5.4:72320309-72320328 None:intergenic 35.0%
!! CCAAGATAATGAAGCATTGA+AGG - chr5.4:72323924-72323943 MS.gene038336:CDS 35.0%
!! CGTGTACTTATTTTCCCAAA+AGG - chr5.4:72318732-72318751 MS.gene038336:CDS 35.0%
!! CTTTCATTTTTGCATCCCAT+CGG + chr5.4:72323094-72323113 None:intergenic 35.0%
!! GGTTCGTGATGATTTTTCAA+CGG - chr5.4:72321601-72321620 MS.gene038336:intron 35.0%
!! TTTGGCTTGAAATACTCATG+AGG + chr5.4:72319899-72319918 None:intergenic 35.0%
!!! ACCTTGTAGTTTTTCAAGCT+TGG + chr5.4:72324043-72324062 None:intergenic 35.0%
!!! GTTGGCTTTTAGGCAAATTT+TGG - chr5.4:72321898-72321917 MS.gene038336:intron 35.0%
!!! TTTTGAATTGTTGGCTTTGC+TGG + chr5.4:72323330-72323349 None:intergenic 35.0%
AAAATTGAGCTATGGCTCAC+AGG + chr5.4:72320904-72320923 None:intergenic 40.0%
AAATTGAGCTATGGCTCACA+GGG + chr5.4:72320903-72320922 None:intergenic 40.0%
AACATGTACTCTGTGAGAAG+AGG - chr5.4:72318870-72318889 MS.gene038336:CDS 40.0%
AACGGTGAAGAATCTTTGAC+AGG + chr5.4:72318416-72318435 None:intergenic 40.0%
ACAAGAAGAGGTCTCAAAAC+TGG - chr5.4:72323636-72323655 MS.gene038336:CDS 40.0%
ACATATGTTCTGGTAAACGG+TGG - chr5.4:72322534-72322553 MS.gene038336:intron 40.0%
AGAAGGTCTACAGAATCTTC+AGG - chr5.4:72324226-72324245 MS.gene038336:CDS 40.0%
AGATGAAGACCTTGCAAAAC+AGG - chr5.4:72320231-72320250 MS.gene038336:intron 40.0%
ATAGAGGCCACTAATGATGA+AGG - chr5.4:72323302-72323321 MS.gene038336:intron 40.0%
ATCCTGAAAAAGAGGAGCTA+AGG - chr5.4:72322487-72322506 MS.gene038336:intron 40.0%
ATGAACGCACATCAGGATAA+CGG + chr5.4:72323003-72323022 None:intergenic 40.0%
ATTTCACGATCATCACTCGA+TGG + chr5.4:72321196-72321215 None:intergenic 40.0%
ATTTCAGGAGAAGCAATGGT+AGG + chr5.4:72318190-72318209 None:intergenic 40.0%
CAATGTGGATGAGAAAGACA+CGG - chr5.4:72319759-72319778 MS.gene038336:CDS 40.0%
CAATTTACCGAGACGTATGA+AGG + chr5.4:72319677-72319696 None:intergenic 40.0%
CATGATGCTTTAGTTGGAAG+AGG - chr5.4:72321509-72321528 MS.gene038336:intron 40.0%
CCATGAGTGCAGTTAGAAAA+TGG - chr5.4:72322926-72322945 MS.gene038336:intron 40.0%
CCTTCTCAACACTATTGTGA+AGG - chr5.4:72323843-72323862 MS.gene038336:intron 40.0%
CGATTCATATGGAGAATTGG+GGG - chr5.4:72318437-72318456 MS.gene038336:CDS 40.0%
CTTCACCGTTTCGATTCATA+TGG - chr5.4:72318426-72318445 MS.gene038336:CDS 40.0%
GAAGATACTCGATGACATGA+AGG + chr5.4:72320972-72320991 None:intergenic 40.0%
GAAGGTCTACAGAATCTTCA+GGG - chr5.4:72324227-72324246 MS.gene038336:CDS 40.0%
GCATAACTACTCCAACCATT+GGG + chr5.4:72318816-72318835 None:intergenic 40.0%
GCCAAGCTTGAAAAACTACA+AGG - chr5.4:72324039-72324058 MS.gene038336:intron 40.0%
GCTGGAATTAACTGTTGTCT+TGG + chr5.4:72322021-72322040 None:intergenic 40.0%
GGACCATTTGTCCATGTATT+TGG - chr5.4:72318767-72318786 MS.gene038336:CDS 40.0%
GTAACCGGTAGTTAGTTACT+GGG - chr5.4:72321228-72321247 MS.gene038336:intron 40.0%
TAGCCATAATCATCACTCGA+TGG + chr5.4:72321139-72321158 None:intergenic 40.0%
TCAAAGTATGTCATCCGAGA+GGG - chr5.4:72321067-72321086 MS.gene038336:intron 40.0%
TCGTAGACTATGACAAAGTG+AGG - chr5.4:72320278-72320297 MS.gene038336:intron 40.0%
TCTCCTTTCATCTTTGCTAC+CGG + chr5.4:72318158-72318177 None:intergenic 40.0%
TCTTCATCCGATGGAGAAAA+AGG + chr5.4:72323185-72323204 None:intergenic 40.0%
TGCATAACTACTCCAACCAT+TGG + chr5.4:72318817-72318836 None:intergenic 40.0%
TGGGTTGCATGCAATTCTAA+TGG - chr5.4:72320787-72320806 MS.gene038336:intron 40.0%
TTAGCATTAGAGGGAGAGTT+GGG - chr5.4:72319300-72319319 MS.gene038336:intron 40.0%
TTATTGCACATATCTGCTCC+CGG + chr5.4:72320500-72320519 None:intergenic 40.0%
TTCACTTCCTTCATACGTCT+CGG - chr5.4:72319667-72319686 MS.gene038336:intron 40.0%
TTCCCAGCTTGCAAAATTTG+TGG - chr5.4:72320622-72320641 MS.gene038336:CDS 40.0%
TTGAAGTTGGGGGTTACAAA+TGG - chr5.4:72318501-72318520 MS.gene038336:CDS 40.0%
TTTGAAAAAAGAGCGAGCCT+CGG - chr5.4:72323885-72323904 MS.gene038336:intron 40.0%
TTTGATCATTAGCGAGACGA+TGG + chr5.4:72324146-72324165 None:intergenic 40.0%
! AATGGAGCTTGGTTTGACTT+TGG + chr5.4:72319917-72319936 None:intergenic 40.0%
! ACTTTCCAACCTGTTTTGCA+AGG + chr5.4:72320243-72320262 None:intergenic 40.0%
! AGGCAATTAGTTTAGTCCGA+TGG - chr5.4:72323075-72323094 MS.gene038336:intron 40.0%
! CCATTTTCTAACTGCACTCA+TGG + chr5.4:72322929-72322948 None:intergenic 40.0%
! CCTTCACAATAGTGTTGAGA+AGG + chr5.4:72323846-72323865 None:intergenic 40.0%
! GCACCTTCAATTTTCTTGCA+AGG - chr5.4:72321005-72321024 MS.gene038336:intron 40.0%
! GCCGACGAATTTTGAATTGT+TGG + chr5.4:72323339-72323358 None:intergenic 40.0%
! GGCAATTAGTTTAGTCCGAT+GGG - chr5.4:72323076-72323095 MS.gene038336:intron 40.0%
! GTTGATGTTTTGTGAAGAGC+TGG + chr5.4:72323504-72323523 None:intergenic 40.0%
! TACCTTAGCTCCTCTTTTTC+AGG + chr5.4:72322492-72322511 None:intergenic 40.0%
! TAGTCGATTCTATCTAGTGG+CGG - chr5.4:72318618-72318637 MS.gene038336:CDS 40.0%
! TCAGGTTCCTTTTTCTCCAT+CGG - chr5.4:72323175-72323194 MS.gene038336:intron 40.0%
! TTGTGTTTGGTGGTTTGTGA+GGG + chr5.4:72323983-72324002 None:intergenic 40.0%
! TTTTCTTGCAAGGGGCTTAT+TGG - chr5.4:72321015-72321034 MS.gene038336:intron 40.0%
!!! GTCTCTATGTCCACTTTTTC+CGG + chr5.4:72323455-72323474 None:intergenic 40.0%
!!! TGAAGGTGCTGCATGTTTTT+GGG + chr5.4:72320994-72321013 None:intergenic 40.0%
!!! TTGAAGGTGCTGCATGTTTT+TGG + chr5.4:72320995-72321014 None:intergenic 40.0%
!!! TTGTTTTTGGAAGTGGAGCA+TGG - chr5.4:72322293-72322312 MS.gene038336:intron 40.0%
!!! TTTTTTCTTCCACTCTGAGC+AGG - chr5.4:72318709-72318728 MS.gene038336:intron 40.0%
AAGCCGGTAGCAAAGATGAA+AGG - chr5.4:72318152-72318171 MS.gene038336:CDS 45.0%
ACAACGCGTTTATGCAGAAG+AGG - chr5.4:72320010-72320029 MS.gene038336:intron 45.0%
AGACACGGCTGAGCATATAA+CGG - chr5.4:72319774-72319793 MS.gene038336:CDS 45.0%
AGGTCGAAGAAAGAACTCAG+TGG - chr5.4:72320030-72320049 MS.gene038336:intron 45.0%
AGTTATGCCTATTGCTGTGC+AGG - chr5.4:72322768-72322787 MS.gene038336:CDS 45.0%
ATAGAGACCGCTCACAATGA+AGG - chr5.4:72323467-72323486 MS.gene038336:intron 45.0%
ATCTGTCTCGCTGCAACTAT+AGG - chr5.4:72318257-72318276 MS.gene038336:CDS 45.0%
ATCTTGGTCAGTGCTCTTCT+TGG + chr5.4:72323911-72323930 None:intergenic 45.0%
ATTTGAATGAGCAAGGCGCA+TGG + chr5.4:72319187-72319206 None:intergenic 45.0%
CAAAAACGCTGAAGCTCAAC+CGG - chr5.4:72323433-72323452 MS.gene038336:intron 45.0%
CAAGAGAGTTGCGTTGTGTT+TGG + chr5.4:72323996-72324015 None:intergenic 45.0%
CAATCTCAGCATTCCGTCAA+AGG - chr5.4:72323613-72323632 MS.gene038336:CDS 45.0%
CCAGCATAACTGCCATAGAA+GGG + chr5.4:72322585-72322604 None:intergenic 45.0%
CCCAAAAGGGAACAATGTGA+CGG - chr5.4:72318746-72318765 MS.gene038336:CDS 45.0%
GAAGACCTTGCAAAACAGGT+TGG - chr5.4:72320235-72320254 MS.gene038336:intron 45.0%
GACCTCTTCTTGTCCTTTGA+CGG + chr5.4:72323629-72323648 None:intergenic 45.0%
GCCCCTTGCAAGAAAATTGA+AGG + chr5.4:72321011-72321030 None:intergenic 45.0%
GCTGGTACCTTCATCATTAG+TGG + chr5.4:72323312-72323331 None:intergenic 45.0%
GGAATATGTGCACAATCTCC+AGG - chr5.4:72323027-72323046 MS.gene038336:intron 45.0%
GGTAACCGGTAGTTAGTTAC+TGG - chr5.4:72321227-72321246 MS.gene038336:intron 45.0%
GGTGATGCATGTCTACATAG+TGG + chr5.4:72319618-72319637 None:intergenic 45.0%
GTAAATGCTAAGGGTTGCCT+TGG + chr5.4:72319513-72319532 None:intergenic 45.0%
GTAATCTCCTGCACAGCAAT+AGG + chr5.4:72322778-72322797 None:intergenic 45.0%
GTCAAAGTATGTCATCCGAG+AGG - chr5.4:72321066-72321085 MS.gene038336:intron 45.0%
GTTAGCATTAGAGGGAGAGT+TGG - chr5.4:72319299-72319318 MS.gene038336:intron 45.0%
TAGCATTAGAGGGAGAGTTG+GGG - chr5.4:72319301-72319320 MS.gene038336:intron 45.0%
TAGTTGCAGCGAGACAGATA+AGG + chr5.4:72318256-72318275 None:intergenic 45.0%
TATGTCATCCGAGAGGGATT+CGG - chr5.4:72321073-72321092 MS.gene038336:intron 45.0%
TCCAAGTATGAACGCACATC+AGG + chr5.4:72323010-72323029 None:intergenic 45.0%
TCCAGCATAACTGCCATAGA+AGG + chr5.4:72322586-72322605 None:intergenic 45.0%
TCCTGATGTGCGTTCATACT+TGG - chr5.4:72323006-72323025 MS.gene038336:intron 45.0%
TGAAGCTCAACCGGAAAAAG+TGG - chr5.4:72323442-72323461 MS.gene038336:intron 45.0%
TGTTGAAGAGAAAATCCCGG+AGG - chr5.4:72324179-72324198 MS.gene038336:CDS 45.0%
TTCCGTCAAAGGACAAGAAG+AGG - chr5.4:72323624-72323643 MS.gene038336:CDS 45.0%
TTCTATGGCAGTTATGCTGG+AGG - chr5.4:72322585-72322604 MS.gene038336:intron 45.0%
TTTGACAGGCTGACTATCCA+CGG + chr5.4:72318402-72318421 None:intergenic 45.0%
! ACATTCACCCACTAGCTTCA+AGG + chr5.4:72320596-72320615 None:intergenic 45.0%
! AGCTCAATTCCAGCGCTTTT+GGG - chr5.4:72321712-72321731 MS.gene038336:intron 45.0%
! ATTCTATCTAGTGGCGGAAG+TGG - chr5.4:72318624-72318643 MS.gene038336:CDS 45.0%
! CAGCTAATTTGCCCAATGGT+TGG - chr5.4:72318802-72318821 MS.gene038336:CDS 45.0%
! CATTCACCCACTAGCTTCAA+GGG + chr5.4:72320595-72320614 None:intergenic 45.0%
! CCGTCACATTGTTCCCTTTT+GGG + chr5.4:72318749-72318768 None:intergenic 45.0%
! GACTCAGCTAATTTGCCCAA+TGG - chr5.4:72318798-72318817 MS.gene038336:CDS 45.0%
! GGAGAATTGGGGGATTTTCT+TGG - chr5.4:72318447-72318466 MS.gene038336:CDS 45.0%
! GTTGTGTTTGGTGGTTTGTG+AGG + chr5.4:72323984-72324003 None:intergenic 45.0%
! TCCGTCACATTGTTCCCTTT+TGG + chr5.4:72318750-72318769 None:intergenic 45.0%
!! ATTCCAGCGCTTTTGGGTAT+TGG - chr5.4:72321718-72321737 MS.gene038336:intron 45.0%
!! GAGAGAGAGGCATCTTGTTA+AGG - chr5.4:72319404-72319423 MS.gene038336:CDS 45.0%
!! GTTGGGAGTTTCAGGTTGAA+CGG + chr5.4:72318378-72318397 None:intergenic 45.0%
AAACGCTCCCTTGAAGCTAG+TGG - chr5.4:72320585-72320604 MS.gene038336:intron 50.0%
AACGCTCCCTTGAAGCTAGT+GGG - chr5.4:72320586-72320605 MS.gene038336:intron 50.0%
AACTCCTGAAGCAGTTGCGT+AGG + chr5.4:72323673-72323692 None:intergenic 50.0%
ACAACCCACCACAATCATGC+AGG + chr5.4:72319072-72319091 None:intergenic 50.0%
ACAGGCTCACACAAGACAGT+TGG + chr5.4:72322808-72322827 None:intergenic 50.0%
ACTCCTGAAGCAGTTGCGTA+GGG + chr5.4:72323672-72323691 None:intergenic 50.0%
AGAAGCCTGCATGATTGTGG+TGG - chr5.4:72319064-72319083 MS.gene038336:CDS 50.0%
AGAGAGAGAGTGAGAGAGAG+AGG - chr5.4:72319391-72319410 MS.gene038336:CDS 50.0%
AGGCTTCTCAGAGGAAGTTG+TGG + chr5.4:72319052-72319071 None:intergenic 50.0%
ATGTCATCCGAGAGGGATTC+GGG - chr5.4:72321074-72321093 MS.gene038336:intron 50.0%
CAATCATGCAGGCTTCTCAG+AGG + chr5.4:72319061-72319080 None:intergenic 50.0%
CCCTTCTATGGCAGTTATGC+TGG - chr5.4:72322582-72322601 MS.gene038336:intron 50.0%
CTGAGAAGCCTGCATGATTG+TGG - chr5.4:72319061-72319080 MS.gene038336:CDS 50.0%
GAAGCCTGCATGATTGTGGT+GGG - chr5.4:72319065-72319084 MS.gene038336:CDS 50.0%
GAGAGTTGCGTTGTGTTTGG+TGG + chr5.4:72323993-72324012 None:intergenic 50.0%
GCAACTGCTTCAGGAGTTGA+GGG - chr5.4:72323675-72323694 MS.gene038336:intron 50.0%
GCTGGAACCTTCATTGTGAG+CGG + chr5.4:72323477-72323496 None:intergenic 50.0%
GGTTGCAAGATCAAGTGCAG+AGG + chr5.4:72320932-72320951 None:intergenic 50.0%
TCAGGAGAAGCAATGGTAGG+AGG + chr5.4:72318187-72318206 None:intergenic 50.0%
TCCAATTCAGTTTGCGCCTC+CGG + chr5.4:72324198-72324217 None:intergenic 50.0%
TGACACGCATTGAGGAAGCA+GGG - chr5.4:72321780-72321799 MS.gene038336:intron 50.0%
TGTTACGGGCAAATGGAGCT+TGG + chr5.4:72319928-72319947 None:intergenic 50.0%
TTTGGAAGTGGAGCATGGAC+CGG - chr5.4:72322298-72322317 MS.gene038336:intron 50.0%
! ACAGGGTCTGTGAGGTGTTA+TGG + chr5.4:72320886-72320905 None:intergenic 50.0%
! CAGCTCAATTCCAGCGCTTT+TGG - chr5.4:72321711-72321730 MS.gene038336:intron 50.0%
! GCAGGTTGGAGAACTGAAAG+TGG - chr5.4:72322241-72322260 MS.gene038336:intron 50.0%
! GGGCAATCCCTCCATTTTGA+AGG - chr5.4:72324247-72324266 MS.gene038336:CDS 50.0%
! TTGCCAATACCCAAAAGCGC+TGG + chr5.4:72321724-72321743 None:intergenic 50.0%
!! CAAAAGCGCTGGAATTGAGC+TGG + chr5.4:72321713-72321732 None:intergenic 50.0%
!! TTGTGAAGAGCTGGCTTTGC+TGG + chr5.4:72323495-72323514 None:intergenic 50.0%
AAGTACACGCCTGCTCAGAG+TGG + chr5.4:72318721-72318740 None:intergenic 55.0%
ACCTGAAACTCCCAACACCG+TGG - chr5.4:72318382-72318401 MS.gene038336:CDS 55.0%
AGGCTGACTATCCACGGTGT+TGG + chr5.4:72318396-72318415 None:intergenic 55.0%
CCAATTCAGTTTGCGCCTCC+GGG + chr5.4:72324197-72324216 None:intergenic 55.0%
CGCAACTGCTTCAGGAGTTG+AGG - chr5.4:72323674-72323693 MS.gene038336:intron 55.0%
CTGACACGCATTGAGGAAGC+AGG - chr5.4:72321779-72321798 MS.gene038336:intron 55.0%
GCTTCCTCAATGCGTGTCAG+CGG + chr5.4:72321779-72321798 None:intergenic 55.0%
GGCTGACTATCCACGGTGTT+GGG + chr5.4:72318395-72318414 None:intergenic 55.0%
TATGGCTCACAGGGTCTGTG+AGG + chr5.4:72320894-72320913 None:intergenic 55.0%
TTGACGAGAGGTGAACGCGT+CGG + chr5.4:72323797-72323816 None:intergenic 55.0%
! TCCACGGTGTTGGGAGTTTC+AGG + chr5.4:72318386-72318405 None:intergenic 55.0%
AAGCAGTTGCGTAGGGAGGC+TGG + chr5.4:72323665-72323684 None:intergenic 60.0%
AGCAGTTGCGTAGGGAGGCT+GGG + chr5.4:72323664-72323683 None:intergenic 60.0%
ATGCGTGTCAGCGGCCGAAA+TGG + chr5.4:72321770-72321789 None:intergenic 60.0%
CCCACTTCCCGAATCCCTCT+CGG + chr5.4:72321084-72321103 None:intergenic 60.0%
CCGAGAGGGATTCGGGAAGT+GGG - chr5.4:72321081-72321100 MS.gene038336:intron 60.0%
CCTCCCTACGCAACTGCTTC+AGG - chr5.4:72323666-72323685 MS.gene038336:intron 60.0%
CCTGAAGCAGTTGCGTAGGG+AGG + chr5.4:72323669-72323688 None:intergenic 60.0%
GTCAGTGCTCTTCTTGGCCG+AGG + chr5.4:72323905-72323924 None:intergenic 60.0%
TCCGAGAGGGATTCGGGAAG+TGG - chr5.4:72321080-72321099 MS.gene038336:intron 60.0%
! CCCGGAGGCGCAAACTGAAT+TGG - chr5.4:72324194-72324213 MS.gene038336:CDS 60.0%
TCGGCCGCTGACACGCATTG+AGG - chr5.4:72321772-72321791 MS.gene038336:intron 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 72318148 72324266 72318148 ID=MS.gene038336
chr5.4 mRNA 72318148 72324266 72318148 ID=MS.gene038336.t1;Parent=MS.gene038336
chr5.4 exon 72324179 72324266 72324179 ID=MS.gene038336.t1.exon1;Parent=MS.gene038336.t1
chr5.4 CDS 72324179 72324266 72324179 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
chr5.4 exon 72323892 72324042 72323892 ID=MS.gene038336.t1.exon2;Parent=MS.gene038336.t1
chr5.4 CDS 72323892 72324042 72323892 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
chr5.4 exon 72323523 72323683 72323523 ID=MS.gene038336.t1.exon3;Parent=MS.gene038336.t1
chr5.4 CDS 72323523 72323683 72323523 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
chr5.4 exon 72322619 72322788 72322619 ID=MS.gene038336.t1.exon4;Parent=MS.gene038336.t1
chr5.4 CDS 72322619 72322788 72322619 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
chr5.4 exon 72322072 72322191 72322072 ID=MS.gene038336.t1.exon5;Parent=MS.gene038336.t1
chr5.4 CDS 72322072 72322191 72322072 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
chr5.4 exon 72320609 72320731 72320609 ID=MS.gene038336.t1.exon6;Parent=MS.gene038336.t1
chr5.4 CDS 72320609 72320731 72320609 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
chr5.4 exon 72320095 72320169 72320095 ID=MS.gene038336.t1.exon7;Parent=MS.gene038336.t1
chr5.4 CDS 72320095 72320169 72320095 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
chr5.4 exon 72319711 72319818 72319711 ID=MS.gene038336.t1.exon8;Parent=MS.gene038336.t1
chr5.4 CDS 72319711 72319818 72319711 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
chr5.4 exon 72319556 72319624 72319556 ID=MS.gene038336.t1.exon9;Parent=MS.gene038336.t1
chr5.4 CDS 72319556 72319624 72319556 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
chr5.4 exon 72319366 72319476 72319366 ID=MS.gene038336.t1.exon10;Parent=MS.gene038336.t1
chr5.4 CDS 72319366 72319476 72319366 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
chr5.4 exon 72318725 72319235 72318725 ID=MS.gene038336.t1.exon11;Parent=MS.gene038336.t1
chr5.4 CDS 72318725 72319235 72318725 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
chr5.4 exon 72318148 72318644 72318148 ID=MS.gene038336.t1.exon12;Parent=MS.gene038336.t1
chr5.4 CDS 72318148 72318644 72318148 ID=cds.MS.gene038336.t1;Parent=MS.gene038336.t1
Gene Sequence

>MS.gene038336

ATGGAAGCCGGTAGCAAAGATGAAAGGAGAACTTCTCCTCCTACCATTGCTTCTCCTGAAATTAAGAAAAGAAAGATAACACATAGAGGTAATCAAGGCATGATACCTTATCTGTCTCGCTGCAACTATAGGACAACGCTTATCTGTTTTACCTTTCCAAGTTTTTCAGTTAATTCAAGGCATGATACTTAATTTCTCTTTTAATTTATATTGACGAACATTAGTTGCCGTTCAACCTGAAACTCCCAACACCGTGGATAGTCAGCCTGTCAAAGATTCTTCACCGTTTCGATTCATATGGAGAATTGGGGGATTTTCTTGGATAAATACAATAAAGCTCTATTCAGATGTATTTGAAGTTGGGGGTTACAAATGGTATTGTGCTTACTGCTTACACATTCCCCTGAAATAATATTCATAATGTTCATCTTTCTATTTCAGTAGAAGTGAATCGTTTCGTTTGACCTACTTAGTCGATTCTATCTAGTGGCGGAAGTGGTTTTGTTGTAGCTGTTATATTAGTTCCTATGTGTATATAACTTCAGTGTTCCCTTCTAATTTTTTTTTCTTCCACTCTGAGCAGGCGTGTACTTATTTTCCCAAAAGGGAACAATGTGACGGACCATTTGTCCATGTATTTGGATGTTCAAGACTCAGCTAATTTGCCCAATGGTTGGAGTAGTTATGCACAGTTTAGCTTGACACTAGTTAATCAAATGAACAACATGTACTCTGTGAGAAGAGGTACCCTATTTAGTCTGTTCATTACAATTGTTACAAAATGAACTACCATGCATTCATGTTGAAAAGACCAATTCTGGAATTAAAAGCAAAGAATGTTGTAAGATGTTTGTTGCATTTACTGAAAGAGAAATTTTATTCTTGAAAAAGTCAACTTGCACCACAACTTCCTCTGAGAAGCCTGCATGATTGTGGTGGGTTGTTTTCTGATTAACCAATAATTTGTTTACCTTGTGGGAAAATTCTTTTGCTGTTGTTGATGTAAACTTTAGAACCTTGCTAAACTAGTATCTTTCCATGCGCCTTGCTCATTCAAATTTTACGCCATTAAACTTTTCTACTGAACTTGAAGCTACCACTTGTATATGTATTCTTTCCCTTTTAATAGTAGAGGAGATAGGATAAGGAATGTTAGCATTAGAGGGAGAGTTGGGGTAGCACCTACAGTTTGAATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAGAGAGAGAGGCATCTTGTTAAGGTTAAAATAAACAAAAAGTATCTAATGCATGCAATTTAATGCATTGAGAACTTAAAAATTTTAACTTCTTTTTTAGAACTCTTTCCAAGGCAACCCTTAGCATTTACCATCAAACAAAATGAAAGAGAAAATAGAAACTGAAAATGCACATAATTTTTGGGCATAGCTGCATTATTTGTGACTTTGTTTCCACTATGTAGACATGCATCACCAATTCAATGAACAAGAAAGGGATTGGGGTTTCACTTCCTTCATACGTCTCGGTAAATTGCATGATCTTCGTAAAGGGTATCTTATGAATGATACTCTTGTAGTTGAAGTTGAAGTAACATGCAATGTGGATGAGAAAGACACGGCTGAGCATATAACGGTAAGTAAATATTCCTATGTTTAGTCAGCTATTGCAATCAACTCGATGACTGTTCTTGTCCGAAACAGTGTCATTTTTTATATGTTTCTCATGAGTAGTTCCTCATGAGTATTTCAAGCCAAAGTCAAACCAAGCTCCATTTGCCCGTAACATTTAATCTCTATTGTACTATTTCTGTTGGTTTATTAATCTGAAATATTTGCACTGGATTTATACAACGCGTTTATGCAGAAGAGGTCGAAGAAAGAACTCAGTGGAAAAAAGCACAAAAATAAAGAAAAGGAAGAGACTCACCTCCACACTATTATAAAGGTGATCTAAGCTTGCTTCCCTAGATATTTGTTTTGTTTGTATCTTTAGAAACATTCTGTTAACGGCTCAATCAGATTGTATTTATATTTATACTGATAATAAAAAATATTCTCAGGTTGTACGAGATGAAGACCTTGCAAAACAGGTTGGAAAGTATATATATTTTGATCTCGTAGACTATGACAAAGTGAGGAGTTTCCATGTTCAAAAGCAGATGTCATTTAACATTTTCAAGGTATCATCATCAGTTACAGTCTTACGTTGTAAAATAAGAGGAAATCTGAATCTTGTCAATTGAGGATTGATGTACAAGCACTAATGTGATTATATAGAATAAGCCTAATAAAACTTAATAAAGTACCCCTAAAAAAAATCTTAATAAAGAAAAACCGGGAGCAGATATGTGCAATAATGACAGATACGACTAAATACGCACCGAGAATATTCTATCCTAAATTGGTGCCAATTACATATTTAAAACGCTCCCTTGAAGCTAGTGGGTGAATGTCGAACATTCCCAGCTTGCAAAATTTGTGGAAAGTTCCTTGGTGAATACACTTGCTAATTGAAGTCCAAAAGACCAAAATAGATGTTGGTTGTAGTGATAAGGTCATTATTTAATTCCTCATTGATGAACTGTCAATCTATCTATATGTGTTTGGTTCTATCATGTTGTACTTGGGTTGCATGCAATTCTAATGGAAGAAGTATTATCACAGATAAGCCTCATATGATATTTGTACTTTATTTCGAGGTTATCAAGTATGATCTTCGTCCATAACACCTCACAGACCCTGTGAGCCATAGCTCAATTTTTTCTGCCTCTGCACTTGATCTTGCAACCACATTTAGCTTTTTACTCCTTCATGTCATCGAGTATCTTCCCAAAAACATGCAGCACCTTCAATTTTCTTGCAAGGGGCTTATTGGCCTATAAGACATTCTGTTTCCCTTCATTGTCAAAGTATGTCATCCGAGAGGGATTCGGGAAGTGGGAATATTGATAACGTCATTTCAACTTCAATTTTCCATCGAGTGATGATTATGGCTAGTAAATTATGATAGGTAAATTATGATAGGTATTTCCATCGAGTGATGATCGTGAAATCGCATATGATAGGTAACCGGTAGTTAGTTACTGGGTTAATTAGGTACTTAGTTAGGCCCAATAAATTATGTTGCCTACAAAAAAACTGGGTTTAGACTTTAGATGGAGAGTTAGGCAATTACCTTTTGAATAAGTGCATTAAATTTCCGTACTATCTCGAATTTTTATACCGAGATACAAAAGCCATTGAAGTTGGGAAAGTTTAGTTTGTGAACTGCTATCGAGCAAATCATTATTTTAGGTGCATCCTTATAGAAAACAATTATTTTAAAATCAATACTTAAATATAAAATCATGATGCTTTAGTTGGAAGAGGAAACAATTGCCATATGAATATTTGTGGTGTTTATGCTCTTGATTTTATGATTTGTTATATAATTTATGAGGTTCGTGATGATTTTTCAACGGATGTATTATTTTTGTATGTTTGATTTTTCTGTTTTATTGCTAATATATGTGATATGTAGGAAGAGGTTGCTAAAGAGTTTTGCATACCAGCTCAATTCCAGCGCTTTTGGGTATTGGCAAAGCGTGAAAACGATACATATCGTCCATTTCGGCCGCTGACACGCATTGAGGAAGCAGGGCCTGTAAATTCATAAGATCTCTTGAAGCTTATCAATATTATTTTATTGATATACCCCTTCAAACTTCTCATATAATGACTTTTTCATTTCTGATTGTTGGCTTTTAGGCAAATTTTGGTTTTGTATAAAAAAAACTCAGCTTCTTTCCCTCTCATTTATGTTGTGTTGAATTTGTTCATGACATGTTATATCAATCTACTATTTCATGTTTTGGGCCAAGACAACAGTTAATTCCAGCTATGTTAGCTTTGTTTATTTTTACTTTTTTATTTTGCCATTTCGACTACCTTCTTTTATATCTTTATAATATATATGCAGCACTATCAAGAGGTTTTCATATTGATTGTTTTGGATCCTATAGTTTTTTCTTTGTAACGCAGTACACCAATTTATCTATGATTTGAAGTTTATTTTTTTCCTCTCATTCTGATTTAAATTGCAGGTTGGAGAACTGAAAGTGGTAAACAAGGTTCACAGAGCAGAATTAAAATTGTTTTTGGAAGTGGAGCATGGACCGGTAACATTTATATTATGAAGTTGTATACTATATTTTGATACCACGAAACATCATTCAAGTAAAATCCTATATATGATTGACAAACTGCATTATTATATAGGATTTGTGTCCCATTGAGCCTCTCCATAAGGGAAAGGATGATATGTTACTTTTTTTCAAGTTATATGATCCTGAAAAAGAGGAGCTAAGGTACTGAATAATTTATTGTGATTTAACATATGTTCTGGTAAACGGTGGACCTTAGTTGATACTAAATGTATTTCCCTTCTATGGCAGTTATGCTGGAGGCTCTTTGTGAACTGTACTCATAAGCCATCAGAAATCTTAACAAGCTTAAATAAATTGGCTGGCTATGATCCTGATGAAGAGATTGAACTTTATGAGGTTGGTTTGTTTTGTCTGATTTATTATTTATCTGTTGTACAACAAATTTGTCGAGTTACGAGTTAGTTATGCCTATTGCTGTGCAGGAGATTACGTCTGTACCAACTGTCTTGTGTGAGCCTGTTGACAAGAAATTAACATTTCAAGAAAGTGAGGTATAACACATACCCAGTTAATGTACACTAAGTTACTGCACCATTTGTTTTCTTATTGATTTATTTTCCATGAGTGCAGTTAGAAAATGGTGATATTATATGCTTTCAGAAGGCTTCTAAAATGAATAACGAGAAGCATTTCCGTTATCCTGATGTGCGTTCATACTTGGAATATGTGCACAATCTCCAGGTATTTCCTTTTTGATGTTTAATTAAAGGCAATTAGTTTAGTCCGATGGGATGCAAAAATGAAAGTTACCCATTTATTCTTGTCCTTTTTCTAGGCTTAACTTGAACTGAATTTTTTTTTCGCTGTTCAGGTTCCTTTTTCTCCATCGGATGAAGAAATCAAAGATGAAGAATCATTGGAGGAGCAAAACAAAAACATTTTAGGAGAAGAAACAAATGTTGATAAAAATGTAGCTCAACAGTTAAAAGTGGACATAGAGGCCACTAATGATGAAGGTACCAGCAAAGCCAACAATTCAAAATTCGTCGGCATAGACTTTGAAAAAATTAATGATATGATACTTGAGGAGTTGAGAATATCATTGCTTCAACAAACCAATGTTGACAAAAACGCTGAAGCTCAACCGGAAAAAGTGGACATAGAGACCGCTCACAATGAAGGTTCCAGCAAAGCCAGCTCTTCACAAAACATCAACCTAGACTTGAAAGATATTGATGCTATGATAGATGAGGATGTCATTGCTGCAATCGACAAAGTTTTATCAGAAGGGAATCTATTTCATTACAATCTCAGCATTCCGTCAAAGGACAAGAAGAGGTCTCAAAACTGGATCCCAGCCTCCCTACGCAACTGCTTCAGGAGTTGAGGGATATTGCCTTTAAAGAAGACTTGGTTGAAAAATTTAAAGAAGGTATCACTCCTAAAGTTAACTTCAATGCAGTCAAGGAAAAAATTGACGCTAATGCCGACGCGTTCACCTCTCGTCAATTAGAACAAGTTGGTGTTGTTGTCGACCTTCTCAACACTATTGTGAAGGTGTTTGAGCAATTAAAAAATTTGAAAAAAGAGCGAGCCTCGGCCAAGAAGAGCACTGACCAAGATAATGAAGCATTGAAGGAGACGAGACAAAAAATATTGACATCAAAGACTTCCCTCACAAACCACCAAACACAACGCAACTCTCTTGATGCTCAAATTGCTGATCTTAAAGCCAAGCTTGAAAAACTACAAGGTGACAGAGCCAAAATTGATGAGATTAAAGATCAAGAGAAAGATAAGATCACATCTTTTAACAAAGAAGTTAAATCAATTTTCCATCGTCTCGCTAATGATCAAATCAAATTGAAAAGTGTTGAAGAGAAAATCCCGGAGGCGCAAACTGAATTGGAAAGTCATGAGAAGGTCTACAGAATCTTCAGGGCAATCCCTCCATTTTGA
Protein sequence

>MS.gene038336.t1

MEAGSKDERRTSPPTIASPEIKKRKITHRVAVQPETPNTVDSQPVKDSSPFRFIWRIGGFSWINTIKLYSDVFEVGGYKWRVLIFPKGNNVTDHLSMYLDVQDSANLPNGWSSYAQFSLTLVNQMNNMYSVRRDMHHQFNEQERDWGFTSFIRLGKLHDLRKGYLMNDTLVVEVEVTCNVDEKDTAEHITVVRDEDLAKQVGKYIYFDLVDYDKVRSFHVQKQMSFNIFKEEVAKEFCIPAQFQRFWVLAKRENDTYRPFRPLTRIEEAGPVGELKVVNKVHRAELKLFLEVEHGPLCWRLFVNCTHKPSEILTSLNKLAGYDPDEEIELYEEITSVPTVLCEPVDKKLTFQESELENGDIICFQKASKMNNEKHFRYPDVRSYLEYVHNLQVPFSPSDEEIKDEESLEEQNKNILGEETNVDKNVAQQLKVDIEATNDEGTSKANNSKFVGIDFEKINDMILEELRISLLQQTNVDKNAEAQPEKVDIETAHNEGSSKASSSQNINLDLKDIDAMIDEDVIAAIDKVLSEGNLFHYNLSIPSKDKKRSQNWIPASLRNCFRIKEKIDANADAFTSRQLEQVGVVVDLLNTIVKVFEQLKNLKKERASAKKSTDQDNEALKETRQKILTSKTSLTNHQTQRNSLDAQIADLKAKLEKLQGDRAKIDEIKDQEKDKITSFNKEVKSIFHRLANDQIKLKSVEEKIPEAQTELESHEKVYRIFRAIPPF