Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030042.t1 | AET00387.2 | 63.1 | 778 | 227 | 4 | 10 | 728 | 16 | 792 | 5.90E-256 | 893.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030042.t1 | Q9FPT1 | 31.6 | 798 | 186 | 6 | 21 | 466 | 52 | 841 | 4.3e-90 | 334.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030042.t1 | G7KD59 | 63.1 | 778 | 227 | 4 | 10 | 728 | 16 | 792 | 4.2e-256 | 893.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030042.t1 | MTR_5g091450 | 65.553 | 778 | 208 | 5 | 10 | 728 | 16 | 792 | 0.0 | 952 |
MS.gene030042.t1 | MTR_5g091180 | 66.761 | 704 | 201 | 7 | 8 | 701 | 22 | 702 | 0.0 | 857 |
MS.gene030042.t1 | MTR_5g091530 | 87.376 | 404 | 31 | 1 | 65 | 468 | 1 | 384 | 0.0 | 725 |
MS.gene030042.t1 | MTR_5g091430 | 69.217 | 549 | 164 | 3 | 183 | 728 | 4 | 550 | 0.0 | 724 |
MS.gene030042.t1 | MTR_5g091410 | 61.896 | 559 | 184 | 4 | 170 | 728 | 20 | 549 | 0.0 | 617 |
MS.gene030042.t1 | MTR_5g091550 | 64.163 | 466 | 141 | 4 | 21 | 462 | 15 | 478 | 0.0 | 558 |
MS.gene030042.t1 | MTR_5g091550 | 63.482 | 471 | 141 | 5 | 21 | 462 | 15 | 483 | 0.0 | 551 |
MS.gene030042.t1 | MTR_5g086700 | 71.429 | 294 | 82 | 2 | 148 | 439 | 533 | 826 | 3.89e-120 | 387 |
MS.gene030042.t1 | MTR_5g086700 | 63.014 | 146 | 49 | 2 | 10 | 151 | 42 | 186 | 8.47e-49 | 186 |
MS.gene030042.t1 | MTR_5g086700 | 71.429 | 294 | 82 | 2 | 148 | 439 | 533 | 826 | 4.78e-120 | 387 |
MS.gene030042.t1 | MTR_5g086700 | 63.014 | 146 | 49 | 2 | 10 | 151 | 42 | 186 | 9.24e-49 | 186 |
MS.gene030042.t1 | MTR_3g079840 | 68.707 | 294 | 90 | 2 | 148 | 439 | 528 | 821 | 3.04e-117 | 379 |
MS.gene030042.t1 | MTR_3g079840 | 59.459 | 148 | 53 | 2 | 10 | 151 | 35 | 181 | 2.45e-46 | 178 |
MS.gene030042.t1 | MTR_3g079840 | 68.707 | 294 | 90 | 2 | 148 | 439 | 529 | 822 | 3.13e-117 | 379 |
MS.gene030042.t1 | MTR_3g079840 | 59.459 | 148 | 53 | 2 | 10 | 151 | 36 | 182 | 2.50e-46 | 178 |
MS.gene030042.t1 | MTR_1g041240 | 58.007 | 281 | 116 | 2 | 148 | 426 | 529 | 809 | 1.07e-92 | 312 |
MS.gene030042.t1 | MTR_1g041240 | 50.345 | 145 | 64 | 3 | 11 | 149 | 38 | 180 | 7.93e-36 | 146 |
MS.gene030042.t1 | MTR_1g041240 | 58.007 | 281 | 116 | 2 | 148 | 426 | 530 | 810 | 1.12e-92 | 312 |
MS.gene030042.t1 | MTR_1g041240 | 49.660 | 147 | 66 | 3 | 9 | 149 | 37 | 181 | 6.47e-36 | 146 |
MS.gene030042.t1 | MTR_1g041240 | 58.007 | 281 | 116 | 2 | 148 | 426 | 528 | 808 | 1.33e-92 | 312 |
MS.gene030042.t1 | MTR_1g041240 | 49.660 | 147 | 66 | 3 | 9 | 149 | 35 | 179 | 7.12e-36 | 146 |
MS.gene030042.t1 | MTR_1g042160 | 33.858 | 127 | 83 | 1 | 25 | 150 | 13 | 139 | 1.01e-21 | 97.1 |
MS.gene030042.t1 | MTR_1g073800 | 31.933 | 119 | 80 | 1 | 7 | 125 | 31 | 148 | 4.71e-16 | 81.6 |
MS.gene030042.t1 | MTR_1g073790 | 31.933 | 119 | 80 | 1 | 7 | 125 | 44 | 161 | 1.08e-14 | 79.0 |
MS.gene030042.t1 | MTR_7g107200 | 32.308 | 130 | 86 | 2 | 22 | 149 | 10 | 139 | 2.09e-14 | 76.3 |
MS.gene030042.t1 | MTR_7g107160 | 33.333 | 135 | 77 | 4 | 26 | 149 | 131 | 263 | 2.46e-14 | 76.3 |
MS.gene030042.t1 | MTR_5g091460 | 78.571 | 42 | 9 | 0 | 183 | 224 | 4 | 45 | 2.90e-14 | 68.2 |
MS.gene030042.t1 | MTR_1g044450 | 31.746 | 126 | 81 | 3 | 25 | 149 | 65 | 186 | 4.34e-14 | 76.6 |
MS.gene030042.t1 | MTR_3g106700 | 30.469 | 128 | 85 | 3 | 27 | 150 | 70 | 197 | 1.13e-13 | 75.5 |
MS.gene030042.t1 | MTR_8g006190 | 33.613 | 119 | 63 | 3 | 43 | 150 | 10 | 123 | 3.95e-13 | 72.4 |
MS.gene030042.t1 | MTR_8g011730 | 29.452 | 146 | 93 | 4 | 24 | 166 | 13 | 151 | 3.52e-12 | 68.9 |
MS.gene030042.t1 | MTR_4g123750 | 30.769 | 156 | 98 | 5 | 17 | 162 | 11 | 166 | 1.84e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030042.t1 | AT5G06600 | 57.931 | 290 | 119 | 3 | 148 | 436 | 529 | 816 | 6.72e-94 | 313 |
MS.gene030042.t1 | AT5G06600 | 57.432 | 148 | 55 | 2 | 9 | 149 | 33 | 179 | 2.06e-43 | 169 |
MS.gene030042.t1 | AT3G11910 | 59.854 | 274 | 108 | 2 | 148 | 420 | 527 | 799 | 8.73e-94 | 315 |
MS.gene030042.t1 | AT3G11910 | 54.861 | 144 | 62 | 2 | 8 | 149 | 36 | 178 | 4.67e-40 | 159 |
MS.gene030042.t1 | AT3G11910 | 59.854 | 274 | 108 | 2 | 148 | 420 | 527 | 799 | 8.73e-94 | 315 |
MS.gene030042.t1 | AT3G11910 | 54.861 | 144 | 62 | 2 | 8 | 149 | 36 | 178 | 4.67e-40 | 159 |
MS.gene030042.t1 | AT3G11910 | 59.854 | 274 | 108 | 2 | 148 | 420 | 526 | 798 | 8.88e-94 | 315 |
MS.gene030042.t1 | AT3G11910 | 54.861 | 144 | 62 | 2 | 8 | 149 | 35 | 177 | 4.62e-40 | 159 |
MS.gene030042.t1 | AT3G11910 | 59.854 | 274 | 108 | 2 | 148 | 420 | 526 | 798 | 8.88e-94 | 315 |
MS.gene030042.t1 | AT3G11910 | 54.861 | 144 | 62 | 2 | 8 | 149 | 35 | 177 | 4.62e-40 | 159 |
MS.gene030042.t1 | AT5G06600 | 57.931 | 290 | 119 | 3 | 148 | 436 | 528 | 815 | 4.05e-93 | 313 |
MS.gene030042.t1 | AT5G06600 | 57.432 | 148 | 55 | 2 | 9 | 149 | 32 | 178 | 2.35e-43 | 169 |
MS.gene030042.t1 | AT5G06600 | 57.931 | 290 | 119 | 3 | 148 | 436 | 529 | 816 | 4.77e-93 | 313 |
MS.gene030042.t1 | AT5G06600 | 57.432 | 148 | 55 | 2 | 9 | 149 | 33 | 179 | 2.37e-43 | 169 |
MS.gene030042.t1 | AT3G58270 | 42.188 | 128 | 71 | 2 | 25 | 150 | 8 | 134 | 2.31e-21 | 96.7 |
MS.gene030042.t1 | AT3G58270 | 42.188 | 128 | 71 | 2 | 25 | 150 | 8 | 134 | 2.31e-21 | 96.7 |
MS.gene030042.t1 | AT3G58270 | 42.188 | 128 | 71 | 2 | 25 | 150 | 8 | 134 | 2.31e-21 | 96.7 |
MS.gene030042.t1 | AT3G27040 | 34.532 | 139 | 89 | 1 | 24 | 160 | 8 | 146 | 7.60e-21 | 93.6 |
MS.gene030042.t1 | AT3G58370 | 38.583 | 127 | 76 | 1 | 25 | 149 | 9 | 135 | 8.98e-21 | 94.0 |
MS.gene030042.t1 | AT3G58250 | 41.538 | 130 | 73 | 2 | 24 | 150 | 9 | 138 | 2.44e-20 | 93.2 |
MS.gene030042.t1 | AT3G58210 | 38.514 | 148 | 85 | 3 | 16 | 160 | 2 | 146 | 5.23e-20 | 92.4 |
MS.gene030042.t1 | AT2G01790 | 37.226 | 137 | 82 | 2 | 28 | 160 | 11 | 147 | 7.49e-20 | 90.5 |
MS.gene030042.t1 | AT3G58410 | 37.302 | 126 | 75 | 2 | 24 | 149 | 7 | 128 | 2.85e-18 | 87.0 |
MS.gene030042.t1 | AT1G31390 | 37.398 | 123 | 75 | 1 | 20 | 140 | 3 | 125 | 1.44e-17 | 84.0 |
MS.gene030042.t1 | AT3G58350 | 34.532 | 139 | 87 | 2 | 24 | 158 | 7 | 145 | 1.57e-17 | 84.3 |
MS.gene030042.t1 | AT3G58350 | 34.532 | 139 | 87 | 2 | 24 | 158 | 7 | 145 | 1.57e-17 | 84.3 |
MS.gene030042.t1 | AT3G58360 | 37.589 | 141 | 85 | 2 | 22 | 160 | 5 | 144 | 1.03e-16 | 82.0 |
MS.gene030042.t1 | AT2G05410 | 36.765 | 136 | 82 | 3 | 28 | 160 | 11 | 145 | 1.68e-16 | 81.3 |
MS.gene030042.t1 | AT3G58410 | 33.333 | 141 | 76 | 2 | 9 | 149 | 13 | 135 | 6.33e-16 | 80.1 |
MS.gene030042.t1 | AT3G58260 | 33.103 | 145 | 89 | 3 | 26 | 162 | 9 | 153 | 7.33e-16 | 79.7 |
MS.gene030042.t1 | AT3G58220 | 37.681 | 138 | 71 | 6 | 21 | 149 | 7 | 138 | 8.50e-16 | 80.1 |
MS.gene030042.t1 | AT3G58220 | 37.681 | 138 | 71 | 6 | 21 | 149 | 7 | 138 | 9.38e-16 | 80.9 |
MS.gene030042.t1 | AT2G05420 | 36.301 | 146 | 83 | 3 | 24 | 160 | 8 | 152 | 1.01e-15 | 79.0 |
MS.gene030042.t1 | AT3G44790 | 36.232 | 138 | 82 | 2 | 25 | 160 | 5 | 138 | 1.13e-15 | 79.3 |
MS.gene030042.t1 | AT3G58220 | 37.681 | 138 | 71 | 6 | 21 | 149 | 7 | 138 | 1.47e-15 | 77.8 |
MS.gene030042.t1 | AT5G43560 | 39.796 | 98 | 58 | 1 | 28 | 125 | 73 | 169 | 1.66e-15 | 81.3 |
MS.gene030042.t1 | AT5G43560 | 39.796 | 98 | 58 | 1 | 28 | 125 | 73 | 169 | 1.66e-15 | 81.3 |
MS.gene030042.t1 | AT3G58220 | 37.681 | 138 | 71 | 6 | 21 | 149 | 7 | 138 | 1.89e-15 | 79.3 |
MS.gene030042.t1 | AT3G58220 | 37.681 | 138 | 71 | 6 | 21 | 149 | 7 | 138 | 2.42e-15 | 78.2 |
MS.gene030042.t1 | AT3G58340 | 32.184 | 174 | 109 | 4 | 16 | 184 | 2 | 171 | 3.97e-15 | 77.4 |
MS.gene030042.t1 | AT3G58340 | 34.228 | 149 | 92 | 3 | 16 | 162 | 2 | 146 | 1.51e-14 | 75.9 |
MS.gene030042.t1 | AT5G52330 | 33.673 | 98 | 64 | 1 | 28 | 125 | 23 | 119 | 2.00e-14 | 76.3 |
MS.gene030042.t1 | AT5G52330 | 33.673 | 98 | 64 | 1 | 28 | 125 | 23 | 119 | 2.00e-14 | 76.3 |
MS.gene030042.t1 | AT5G52330 | 33.673 | 98 | 64 | 1 | 28 | 125 | 23 | 119 | 2.00e-14 | 76.3 |
MS.gene030042.t1 | AT3G17380 | 31.707 | 164 | 93 | 4 | 20 | 164 | 16 | 179 | 5.91e-14 | 73.9 |
MS.gene030042.t1 | AT1G04300 | 34.653 | 101 | 65 | 1 | 25 | 125 | 69 | 168 | 1.44e-13 | 75.1 |
MS.gene030042.t1 | AT3G44800 | 29.268 | 164 | 114 | 1 | 25 | 186 | 5 | 168 | 2.00e-13 | 72.8 |
MS.gene030042.t1 | AT3G58290 | 33.333 | 144 | 85 | 4 | 16 | 149 | 2 | 144 | 3.13e-13 | 71.2 |
MS.gene030042.t1 | AT3G58200 | 30.702 | 114 | 79 | 0 | 25 | 138 | 8 | 121 | 4.31e-13 | 71.6 |
MS.gene030042.t1 | AT1G31400 | 33.103 | 145 | 90 | 3 | 20 | 160 | 3 | 144 | 1.44e-12 | 69.3 |
MS.gene030042.t1 | AT3G58240 | 30.597 | 134 | 88 | 2 | 20 | 153 | 3 | 131 | 1.52e-12 | 69.7 |
MS.gene030042.t1 | AT1G04300 | 33.028 | 109 | 64 | 2 | 25 | 125 | 69 | 176 | 4.89e-12 | 70.1 |
MS.gene030042.t1 | AT2G25320 | 26.562 | 128 | 90 | 3 | 27 | 150 | 75 | 202 | 7.93e-12 | 69.7 |
MS.gene030042.t1 | AT2G25320 | 32.432 | 148 | 89 | 3 | 25 | 162 | 405 | 551 | 2.80e-11 | 67.8 |
MS.gene030042.t1 | AT2G25320 | 26.562 | 128 | 90 | 3 | 27 | 150 | 74 | 201 | 8.00e-12 | 69.7 |
MS.gene030042.t1 | AT2G25320 | 32.432 | 148 | 89 | 3 | 25 | 162 | 404 | 550 | 2.90e-11 | 67.8 |
MS.gene030042.t1 | AT2G25320 | 26.562 | 128 | 90 | 3 | 27 | 150 | 75 | 202 | 1.16e-11 | 68.9 |
MS.gene030042.t1 | AT2G25320 | 32.432 | 148 | 89 | 3 | 25 | 162 | 405 | 551 | 6.36e-11 | 66.6 |
MS.gene030042.t1 | AT2G25330 | 26.718 | 131 | 86 | 3 | 27 | 150 | 49 | 176 | 1.64e-11 | 68.2 |
Find 117 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACAGAATTACAAGACTTTA+AGG | 0.079246 | 5.2:+77449287 | None:intergenic |
CTTAACAAGGTTAAATAATT+TGG | 0.097053 | 5.2:-77450182 | MS.gene030042:CDS |
ATCTTGCTTCTCAGAAATTT+TGG | 0.160573 | 5.2:+77448831 | None:intergenic |
TCCACAGTGTTGGCAGTTTC+AGG | 0.182689 | 5.2:+77453832 | None:intergenic |
CCTTCAATACTTCATTATTT+TGG | 0.209111 | 5.2:+77448977 | None:intergenic |
AAGACACTGCTGAACATTTA+TGG | 0.224093 | 5.2:-77452376 | MS.gene030042:CDS |
GGAGATTAGGATCCAGTTTC+CGG | 0.240907 | 5.2:+77449253 | None:intergenic |
TTTGTCAACATTCGTTTCTT+TGG | 0.241511 | 5.2:+77449482 | None:intergenic |
GAAATCATTTAACGATTTAA+AGG | 0.242254 | 5.2:-77451721 | MS.gene030042:intron |
CAGCTCAATTCCAGCGCTTT+TGG | 0.258793 | 5.2:-77451151 | MS.gene030042:CDS |
CCCTTTGTAGTTTATTGAAT+TGG | 0.259561 | 5.2:+77452513 | None:intergenic |
CAGCACCGACTTGTTCTAAT+TGG | 0.263642 | 5.2:+77449088 | None:intergenic |
CCATCACATTGTTTCCTTCT+CGG | 0.287084 | 5.2:+77453507 | None:intergenic |
TTGAAGTTGGTGGCTATAAA+TGG | 0.301769 | 5.2:-77453732 | MS.gene030042:intron |
AGAAGCTCTATCGGAACTTC+AGG | 0.317651 | 5.2:-77448675 | MS.gene030042:CDS |
TCTTCGGATTCTATGTTTGA+TGG | 0.326829 | 5.2:+77449543 | None:intergenic |
ACTGCGTTGAAGTTAACTTT+TGG | 0.329061 | 5.2:+77449153 | None:intergenic |
TCCGGAGGTTCAAACTGAAT+TGG | 0.333471 | 5.2:-77448707 | MS.gene030042:CDS |
CCATGAATGCAGTTAGAAAA+TGG | 0.333646 | 5.2:-77449805 | MS.gene030042:intron |
ATTGTCCATTTGAATCGTTT+TGG | 0.356644 | 5.2:+77453802 | None:intergenic |
GAGAGTTGAGTTGTGTTTGT+TGG | 0.360757 | 5.2:+77448911 | None:intergenic |
CTATGATGACATAGTAGAAT+TGG | 0.362771 | 5.2:-77450553 | MS.gene030042:CDS |
TTCAAATGATTCGTCATCTT+CGG | 0.364164 | 5.2:+77449527 | None:intergenic |
AATGTTAATTTCTTGTCAAC+AGG | 0.368724 | 5.2:+77449906 | None:intergenic |
AATTCCTGAAGAAGTTTCTC+AGG | 0.378200 | 5.2:+77449231 | None:intergenic |
TGCAGATTCAGCTAGTTTGC+CGG | 0.380763 | 5.2:-77453459 | MS.gene030042:CDS |
CCAAAATAATGAAGTATTGA+AGG | 0.383089 | 5.2:-77448977 | MS.gene030042:CDS |
AGAGCAAAACGAAAACATTA+TGG | 0.392871 | 5.2:-77449505 | MS.gene030042:CDS |
GAAGAGGTTGCTGTTGCGTT+TGG | 0.393378 | 5.2:-77451179 | MS.gene030042:CDS |
ATCATACCTGTCGACCTTCT+CGG | 0.396694 | 5.2:-77451109 | MS.gene030042:CDS |
TCCAATTCAGTTTGAACCTC+CGG | 0.399698 | 5.2:+77448706 | None:intergenic |
AGAAGTTTCTCAGGGAGATT+AGG | 0.408806 | 5.2:+77449240 | None:intergenic |
TCTCCCTGAGAAACTTCTTC+AGG | 0.409514 | 5.2:-77449235 | MS.gene030042:CDS |
CAATAAACTACAAAGGGATC+AGG | 0.415450 | 5.2:-77452507 | MS.gene030042:CDS |
ACAAGGAGAAGTCCGGAAAC+TGG | 0.422281 | 5.2:-77449265 | MS.gene030042:CDS |
CGTTAAATGATTTCTGCCTT+CGG | 0.427870 | 5.2:+77451730 | None:intergenic |
AGACACTGCTGAACATTTAT+GGG | 0.432811 | 5.2:-77452375 | MS.gene030042:intron |
ACAGGCTCACACATGACATT+TGG | 0.434821 | 5.2:+77449924 | None:intergenic |
GTCTTCTTCAGTAGTGCAAT+GGG | 0.435986 | 5.2:+77450399 | None:intergenic |
AGAAACTTCTTCAGGAATTG+AGG | 0.439153 | 5.2:-77449227 | MS.gene030042:CDS |
CAGCTAGTTTGCCGGATGGT+TGG | 0.440856 | 5.2:-77453451 | MS.gene030042:CDS |
TCTAAGTATGAAGGCACATC+AGG | 0.441956 | 5.2:+77449724 | None:intergenic |
TAAAGTTCAATCTCTTCATC+AGG | 0.447128 | 5.2:+77450148 | None:intergenic |
GACAGTAGTTAATCAAATCA+AGG | 0.451433 | 5.2:-77453405 | MS.gene030042:CDS |
TTCACAAGATACCCTCTTGA+AGG | 0.453357 | 5.2:+77452446 | None:intergenic |
TCAGATGTATTTGAAGTTGG+TGG | 0.458248 | 5.2:-77453742 | MS.gene030042:CDS |
TATTCAGATGTATTTGAAGT+TGG | 0.461499 | 5.2:-77453745 | MS.gene030042:CDS |
ACAAGGTTAAATAATTTGGC+TGG | 0.463059 | 5.2:-77450178 | MS.gene030042:CDS |
AAGTGTTGAAGACAAAATTC+CGG | 0.466080 | 5.2:-77448725 | MS.gene030042:CDS |
CTTTGCCAAAACGATTCAAA+TGG | 0.471471 | 5.2:-77453807 | MS.gene030042:CDS |
TGAAGAGATTGAACTTTATG+AGG | 0.473021 | 5.2:-77450143 | MS.gene030042:intron |
GAAGACCTTGCAAAACAGAT+TGG | 0.475233 | 5.2:-77451807 | MS.gene030042:CDS |
GAAACTTCTTCAGGAATTGA+GGG | 0.478362 | 5.2:-77449226 | MS.gene030042:CDS |
GATGAGTACAATTTGACAAA+AGG | 0.479974 | 5.2:-77453383 | MS.gene030042:intron |
CCATTTGATGGCAGTTATGT+TGG | 0.491636 | 5.2:-77450244 | MS.gene030042:intron |
CCAATTCAATAAACTACAAA+GGG | 0.495186 | 5.2:-77452513 | MS.gene030042:CDS |
AACCTTGTTAAGATTTCTGA+TGG | 0.497935 | 5.2:+77450193 | None:intergenic |
AGCAAATACATAAATCAAAA+CGG | 0.501192 | 5.2:+77448643 | None:intergenic |
TGTCTTCTTCAGTAGTGCAA+TGG | 0.503560 | 5.2:+77450398 | None:intergenic |
TTTGATCATCAGCGAGGTGA+TGG | 0.510889 | 5.2:+77448758 | None:intergenic |
AGGAGAGGTTGAAGAAAGAC+CGG | 0.517283 | 5.2:-77451977 | MS.gene030042:CDS |
AGGCTCTTTGTGAACTGTAC+TGG | 0.518894 | 5.2:-77450220 | MS.gene030042:CDS |
GTCTGCGAAAGAAGTCTTTG+AGG | 0.518978 | 5.2:+77448933 | None:intergenic |
TTTGGAAGTGGAGCGTGGGC+TGG | 0.524148 | 5.2:-77450523 | MS.gene030042:intron |
AGAATATGTGCACAATAGCC+TGG | 0.524915 | 5.2:-77449704 | MS.gene030042:intron |
TGAAGCTCAGCAGTCAAAAG+TGG | 0.527399 | 5.2:-77449454 | MS.gene030042:CDS |
TGCACATATTCTAAGTATGA+AGG | 0.530701 | 5.2:+77449715 | None:intergenic |
TTGACACACATTGAGGAAGC+AGG | 0.534872 | 5.2:-77451083 | MS.gene030042:CDS |
AAGTCTTGTAATTCTGTACA+AGG | 0.535115 | 5.2:-77449282 | MS.gene030042:CDS |
ACACATCTGCTCCAACCATC+CGG | 0.535632 | 5.2:+77453440 | None:intergenic |
TCCTCACAATGTTGTTGAGA+AGG | 0.539367 | 5.2:+77449058 | None:intergenic |
TTTGCCATAACCAAAAGCGC+TGG | 0.542123 | 5.2:+77451141 | None:intergenic |
GCTTCCTCAATGTGTGTCAA+AGG | 0.544090 | 5.2:+77451086 | None:intergenic |
TTGATGGCAGTTATGTTGGA+AGG | 0.545239 | 5.2:-77450240 | MS.gene030042:intron |
CGACTTGTTCTAATTGGTGA+GGG | 0.546345 | 5.2:+77449094 | None:intergenic |
AAAATTAGTCAGCATAGACT+TGG | 0.549459 | 5.2:-77449385 | MS.gene030042:CDS |
TTCACAGAGTTCATACCTCA+TGG | 0.549887 | 5.2:-77452482 | MS.gene030042:CDS |
TCCAATTCAATAAACTACAA+AGG | 0.551229 | 5.2:-77452514 | MS.gene030042:CDS |
CAAAAGCGCTGGAATTGAGC+TGG | 0.551315 | 5.2:+77451152 | None:intergenic |
GAAGCTCTATCGGAACTTCA+GGG | 0.553222 | 5.2:-77448674 | MS.gene030042:CDS |
CTTGTAGACCATGACAAAGT+GGG | 0.554203 | 5.2:-77451765 | MS.gene030042:CDS |
AATAAACTACAAAGGGATCA+GGG | 0.561591 | 5.2:-77452506 | MS.gene030042:CDS |
TCGGCCTTTGACACACATTG+AGG | 0.563051 | 5.2:-77451090 | MS.gene030042:CDS |
ACCTTCTCAACAACATTGTG+AGG | 0.565464 | 5.2:-77449059 | MS.gene030042:CDS |
TCTATGTTTGATGGAAACAA+AGG | 0.566299 | 5.2:+77449552 | None:intergenic |
AAAGTCATGAGAAGCTCTAT+CGG | 0.566750 | 5.2:-77448684 | MS.gene030042:CDS |
ATTCTGTACAAGGAGAAGTC+CGG | 0.571012 | 5.2:-77449272 | MS.gene030042:CDS |
GCTGGTATCTTCAACATGAG+TGG | 0.585090 | 5.2:+77449422 | None:intergenic |
CAAAGGCCGAGAAGGTCGAC+AGG | 0.585558 | 5.2:+77451103 | None:intergenic |
ATGTGTGTCAAAGGCCGAGA+AGG | 0.586098 | 5.2:+77451095 | None:intergenic |
GGAGAGGTTGAAGAAAGACC+GGG | 0.588261 | 5.2:-77451976 | MS.gene030042:CDS |
ATTAACATTTCAAGAAAGTG+AGG | 0.589285 | 5.2:-77449892 | MS.gene030042:intron |
TGGCAAAGGATCCACAGTGT+TGG | 0.590836 | 5.2:+77453822 | None:intergenic |
ATTCCTGAAGAAGTTTCTCA+GGG | 0.592417 | 5.2:+77449232 | None:intergenic |
GATTCAGCTAGTTTGCCGGA+TGG | 0.599038 | 5.2:-77453455 | MS.gene030042:CDS |
CCGACTTGTTCTAATTGGTG+AGG | 0.600412 | 5.2:+77449093 | None:intergenic |
AGAAAATCCCCACTTTGTCA+TGG | 0.605929 | 5.2:+77451757 | None:intergenic |
TCTTGTAGACCATGACAAAG+TGG | 0.610853 | 5.2:-77451766 | MS.gene030042:CDS |
AGTTAACTTCAACGCAGTCA+AGG | 0.613232 | 5.2:-77449148 | MS.gene030042:CDS |
CCGAGAAGGAAACAATGTGA+TGG | 0.614157 | 5.2:-77453507 | MS.gene030042:CDS |
GTATTGTTTGATCCTTCAAG+AGG | 0.618754 | 5.2:-77452458 | MS.gene030042:CDS |
AATACATAAATCAAAACGGA+GGG | 0.620477 | 5.2:+77448647 | None:intergenic |
CCTTGCAAAACAGATTGGAA+AGG | 0.623078 | 5.2:-77451802 | MS.gene030042:CDS |
TATTGTTTGATCCTTCAAGA+GGG | 0.630610 | 5.2:-77452457 | MS.gene030042:CDS |
GACTTGTTCTAATTGGTGAG+GGG | 0.645704 | 5.2:+77449095 | None:intergenic |
TGTTGAAGACAAAATTCCGG+AGG | 0.652902 | 5.2:-77448722 | MS.gene030042:CDS |
TTGTAGACCATGACAAAGTG+GGG | 0.654926 | 5.2:-77451764 | MS.gene030042:CDS |
ATGAAGGCACATCAGGATAG+CGG | 0.672277 | 5.2:+77449731 | None:intergenic |
CCTCACCAATTAGAACAAGT+CGG | 0.677460 | 5.2:-77449093 | MS.gene030042:CDS |
ACCTGAAACTGCCAACACTG+TGG | 0.681026 | 5.2:-77453833 | MS.gene030042:CDS |
AATTGATGCTATGATAGATG+AGG | 0.684819 | 5.2:-77449358 | MS.gene030042:CDS |
ACTTGATTTGATCATCAGCG+AGG | 0.686094 | 5.2:+77448752 | None:intergenic |
AACCATCAGAAATCTTAACA+AGG | 0.687778 | 5.2:-77450195 | MS.gene030042:CDS |
GGATCAAACAATACACCATG+AGG | 0.690377 | 5.2:+77452467 | None:intergenic |
ATACCTTTATAAAAGCGTAG+AGG | 0.694859 | 5.2:+77451913 | None:intergenic |
AAATACATAAATCAAAACGG+AGG | 0.718851 | 5.2:+77448646 | None:intergenic |
AGTTGAAGTACTATGCAATG+TGG | 0.739926 | 5.2:-77452405 | MS.gene030042:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATTTAAAGAAACAAA+AGG | + | chr5.2:77452065-77452084 | None:intergenic | 10.0% |
!! | AAAAAAAGGATAAGAATAAA+TGG | + | chr5.2:77453213-77453232 | None:intergenic | 15.0% |
!! | AAAAAAGGATAAGAATAAAT+GGG | + | chr5.2:77453212-77453231 | None:intergenic | 15.0% |
!! | GACAAACTATATTATTATTT+AGG | - | chr5.2:77452394-77452413 | MS.gene030042:CDS | 15.0% |
!! | TGAAAATAAAAAACATCATA+AGG | + | chr5.2:77449272-77449291 | None:intergenic | 15.0% |
!! | TTTCTTGATTATGATTTATT+AGG | + | chr5.2:77451230-77451249 | None:intergenic | 15.0% |
!!! | AATAAAAAAAGTATTGGTTT+AGG | + | chr5.2:77450687-77450706 | None:intergenic | 15.0% |
!!! | ACAATTATATAGGTTTATTT+TGG | - | chr5.2:77448736-77448755 | MS.gene030042:CDS | 15.0% |
!!! | ATGATTTTTTTATTTATCTG+TGG | - | chr5.2:77452718-77452737 | MS.gene030042:intron | 15.0% |
!!! | ATTTTATGATAGAATGAAAA+TGG | - | chr5.2:77450571-77450590 | MS.gene030042:CDS | 15.0% |
!!! | TAATAATATAGTTTGTCAAT+AGG | + | chr5.2:77452391-77452410 | None:intergenic | 15.0% |
!!! | TTTATTCTTATCCTTTTTTT+AGG | - | chr5.2:77453213-77453232 | MS.gene030042:intron | 15.0% |
!! | AAAGAACAATACTAATTTCT+AGG | + | chr5.2:77450951-77450970 | None:intergenic | 20.0% |
!! | AAGAACAATACTAATTTCTA+GGG | + | chr5.2:77450950-77450969 | None:intergenic | 20.0% |
!! | AATACATTTGATATCAACTA+AGG | + | chr5.2:77452559-77452578 | None:intergenic | 20.0% |
!! | AATTTAAAGAAACAAAAGGA+AGG | + | chr5.2:77452061-77452080 | None:intergenic | 20.0% |
!! | ACATTTATGTTTATGTTGAT+CGG | - | chr5.2:77451919-77451938 | MS.gene030042:CDS | 20.0% |
!! | ACTTAATTCTTTATCTATGT+CGG | - | chr5.2:77451996-77452015 | MS.gene030042:intron | 20.0% |
!! | AGATATTCTTATGTACTTTA+GGG | - | chr5.2:77450477-77450496 | MS.gene030042:intron | 20.0% |
!! | ATAGATAAAGAATTAAGTGT+TGG | + | chr5.2:77451994-77452013 | None:intergenic | 20.0% |
!! | ATCAACATAAACATAAATGT+GGG | + | chr5.2:77451919-77451938 | None:intergenic | 20.0% |
!! | ATGATATATTATGTAATAGC+CGG | - | chr5.2:77449175-77449194 | MS.gene030042:CDS | 20.0% |
!! | CAAAAATAAAGAAAATACAG+TGG | - | chr5.2:77450884-77450903 | MS.gene030042:intron | 20.0% |
!! | CTTAACAAGGTTAAATAATT+TGG | - | chr5.2:77452642-77452661 | MS.gene030042:intron | 20.0% |
!! | GAAATCATTTAACGATTTAA+AGG | - | chr5.2:77451103-77451122 | MS.gene030042:CDS | 20.0% |
!! | GATTGAGAATACAATTATAT+AGG | - | chr5.2:77448726-77448745 | MS.gene030042:CDS | 20.0% |
!! | TAAAAAACATCATAAGGAAT+TGG | + | chr5.2:77449266-77449285 | None:intergenic | 20.0% |
!! | TAGATATTCTTATGTACTTT+AGG | - | chr5.2:77450476-77450495 | MS.gene030042:intron | 20.0% |
!! | TTCATAAAATAAAAGGGATT+TGG | - | chr5.2:77449776-77449795 | MS.gene030042:CDS | 20.0% |
!! | TTGGATGTTAAACTTAAAAT+AGG | + | chr5.2:77450530-77450549 | None:intergenic | 20.0% |
!! | TTGGTTGAAAAATTTAAAGA+AGG | - | chr5.2:77453641-77453660 | MS.gene030042:intron | 20.0% |
!! | TTTGAAAAAAGAACAAGATT+CGG | - | chr5.2:77453808-77453827 | MS.gene030042:CDS | 20.0% |
!! | TTTGTCATATGAATAATATG+TGG | - | chr5.2:77451499-77451518 | MS.gene030042:intron | 20.0% |
!!! | ATTCCATTTTCTCTAATTTT+CGG | + | chr5.2:77451155-77451174 | None:intergenic | 20.0% |
!!! | CTGCTAATTTAATGTTTTAT+GGG | - | chr5.2:77451963-77451982 | MS.gene030042:CDS | 20.0% |
!!! | GAAGCAAATAAAAAAAGTAT+TGG | + | chr5.2:77450693-77450712 | None:intergenic | 20.0% |
!!! | GTGTGATTTTAACATATATT+GGG | - | chr5.2:77452522-77452541 | MS.gene030042:CDS | 20.0% |
!!! | GTTTGTTTTATTTACTCTAT+TGG | - | chr5.2:77449715-77449734 | MS.gene030042:CDS | 20.0% |
!!! | TGCATGATATTATTTTATAC+TGG | - | chr5.2:77448660-77448679 | MS.gene030042:CDS | 20.0% |
!!! | TGTGATTTTAACATATATTG+GGG | - | chr5.2:77452523-77452542 | MS.gene030042:CDS | 20.0% |
!!! | TGTGTGATTTTAACATATAT+TGG | - | chr5.2:77452521-77452540 | MS.gene030042:CDS | 20.0% |
!!! | TTTATGACTTTTTTCGTTTT+TGG | - | chr5.2:77451836-77451855 | MS.gene030042:intron | 20.0% |
! | AATGTTAATTTCTTGTCAAC+AGG | + | chr5.2:77452921-77452940 | None:intergenic | 25.0% |
! | ATAAAATAAAAGGGATTTGG+TGG | - | chr5.2:77449779-77449798 | MS.gene030042:CDS | 25.0% |
! | ATTAACATTTCAAGAAAGTG+AGG | - | chr5.2:77452932-77452951 | MS.gene030042:intron | 25.0% |
! | CAAATTCTATTTCACAATGA+AGG | + | chr5.2:77450159-77450178 | None:intergenic | 25.0% |
! | CAATAGAAATTGCAAGTTAT+TGG | + | chr5.2:77450767-77450786 | None:intergenic | 25.0% |
! | CATAAAATAAGAAGCTTGAA+GGG | + | chr5.2:77451822-77451841 | None:intergenic | 25.0% |
! | CCAATTCAATAAACTACAAA+GGG | - | chr5.2:77450311-77450330 | MS.gene030042:intron | 25.0% |
! | CCATAAAACATTAAATTAGC+AGG | + | chr5.2:77451965-77451984 | None:intergenic | 25.0% |
! | GAGAATACTAAATCCTAAAT+TGG | - | chr5.2:77451301-77451320 | MS.gene030042:intron | 25.0% |
! | GATCAACATAAACATAAATG+TGG | + | chr5.2:77451920-77451939 | None:intergenic | 25.0% |
! | GTGAGCAAATTAATATTGAA+AGG | + | chr5.2:77451794-77451813 | None:intergenic | 25.0% |
! | TACAGAATTACAAGACTTTA+AGG | + | chr5.2:77453540-77453559 | None:intergenic | 25.0% |
! | TATGTAATTGGTACCAATTT+AGG | + | chr5.2:77451317-77451336 | None:intergenic | 25.0% |
! | TCAAAAAATAACGAAGCATA+TGG | + | chr5.2:77452795-77452814 | None:intergenic | 25.0% |
! | TCAAATGTATTTCCATTTGA+TGG | - | chr5.2:77452568-77452587 | MS.gene030042:intron | 25.0% |
! | TCAACATAAACATAAATGTG+GGG | + | chr5.2:77451918-77451937 | None:intergenic | 25.0% |
! | TCATAAAATAAGAAGCTTGA+AGG | + | chr5.2:77451823-77451842 | None:intergenic | 25.0% |
! | TCCAATTCAATAAACTACAA+AGG | - | chr5.2:77450310-77450329 | MS.gene030042:intron | 25.0% |
! | TGATTATGATTTATTAGGCT+AGG | + | chr5.2:77451225-77451244 | None:intergenic | 25.0% |
! | TGATTTCTAATATGTGATCT+AGG | - | chr5.2:77451623-77451642 | MS.gene030042:intron | 25.0% |
! | TTAATTGCTCGATACTTATT+AGG | - | chr5.2:77450983-77451002 | MS.gene030042:intron | 25.0% |
! | TTACTTTAAGTATGTAGCAT+TGG | - | chr5.2:77452834-77452853 | MS.gene030042:intron | 25.0% |
! | TTATTTACTCTATTGGAATC+TGG | - | chr5.2:77449722-77449741 | MS.gene030042:CDS | 25.0% |
! | TTCAAGATAAGCCTAAAAAA+AGG | + | chr5.2:77453227-77453246 | None:intergenic | 25.0% |
! | TTTAACATATATTGGGGTAA+AGG | - | chr5.2:77452529-77452548 | MS.gene030042:intron | 25.0% |
!! | AGTAGAATTGGAATTGTTTT+TGG | - | chr5.2:77452283-77452302 | MS.gene030042:intron | 25.0% |
!! | ATACTCTTTTGTCTTAATTC+TGG | + | chr5.2:77449538-77449557 | None:intergenic | 25.0% |
!! | CCTGCTAATTTAATGTTTTA+TGG | - | chr5.2:77451962-77451981 | MS.gene030042:CDS | 25.0% |
!! | CCTTCAATACTTCATTATTT+TGG | + | chr5.2:77453850-77453869 | None:intergenic | 25.0% |
!! | GAGTGTTGTAAATATGTAAT+TGG | + | chr5.2:77451329-77451348 | None:intergenic | 25.0% |
!! | TATTCAGATGTATTTGAAGT+TGG | - | chr5.2:77449079-77449098 | MS.gene030042:CDS | 25.0% |
!! | TTCATTTTGAATCAAACTGT+AGG | - | chr5.2:77452226-77452245 | MS.gene030042:intron | 25.0% |
!!! | CCAAAATAATGAAGTATTGA+AGG | - | chr5.2:77453847-77453866 | MS.gene030042:intron | 25.0% |
!!! | TTTATTTTGGTATACGAATC+AGG | - | chr5.2:77448749-77448768 | MS.gene030042:CDS | 25.0% |
!!! | TTTTTATTTTCACTATGAGC+AGG | - | chr5.2:77449280-77449299 | MS.gene030042:CDS | 25.0% |
!!! | TTTTTTCGTTTTTGGCTTTT+AGG | - | chr5.2:77451844-77451863 | MS.gene030042:intron | 25.0% |
AAAATTAGTCAGCATAGACT+TGG | - | chr5.2:77453439-77453458 | MS.gene030042:CDS | 30.0% | |
AAACCACAAAAAGAAATACC+AGG | + | chr5.2:77453141-77453160 | None:intergenic | 30.0% | |
AACATCCAAACAAATTCAGA+GGG | - | chr5.2:77450541-77450560 | MS.gene030042:CDS | 30.0% | |
AACCATCAGAAATCTTAACA+AGG | - | chr5.2:77452629-77452648 | MS.gene030042:intron | 30.0% | |
AACCTTGTTAAGATTTCTGA+TGG | + | chr5.2:77452634-77452653 | None:intergenic | 30.0% | |
AATAAACTACAAAGGGATCA+GGG | - | chr5.2:77450318-77450337 | MS.gene030042:intron | 30.0% | |
AATGAAGGATTTCAGAGAAT+AGG | + | chr5.2:77450144-77450163 | None:intergenic | 30.0% | |
AATTGATGCTATGATAGATG+AGG | - | chr5.2:77453466-77453485 | MS.gene030042:CDS | 30.0% | |
AATTGCAAGTTATTGGCAAA+CGG | + | chr5.2:77450760-77450779 | None:intergenic | 30.0% | |
ACAAGGTTAAATAATTTGGC+TGG | - | chr5.2:77452646-77452665 | MS.gene030042:intron | 30.0% | |
ACTGGTAATATGTAACTCAA+AGG | - | chr5.2:77448678-77448697 | MS.gene030042:CDS | 30.0% | |
ACTTAAAATAGGTTTCTACC+TGG | + | chr5.2:77450519-77450538 | None:intergenic | 30.0% | |
AGAAAAGGAAACTAACAATG+AGG | + | chr5.2:77450036-77450055 | None:intergenic | 30.0% | |
AGAGCAAAACGAAAACATTA+TGG | - | chr5.2:77453319-77453338 | MS.gene030042:intron | 30.0% | |
AGATCTGTCATAATAATCAC+AGG | - | chr5.2:77451260-77451279 | MS.gene030042:intron | 30.0% | |
ATGAAAGAGGAAAAGAAATG+TGG | - | chr5.2:77450218-77450237 | MS.gene030042:CDS | 30.0% | |
CAACATAAACATAAATGTGG+GGG | + | chr5.2:77451917-77451936 | None:intergenic | 30.0% | |
CATAGATCTGATGAATTTAC+TGG | + | chr5.2:77451768-77451787 | None:intergenic | 30.0% | |
CCCTTTGTAGTTTATTGAAT+TGG | + | chr5.2:77450314-77450333 | None:intergenic | 30.0% | |
CGGTTACAAGGATTAAATAT+AGG | + | chr5.2:77450093-77450112 | None:intergenic | 30.0% | |
CTACCGAAAATTAGAGAAAA+TGG | - | chr5.2:77451149-77451168 | MS.gene030042:CDS | 30.0% | |
CTATGATGACATAGTAGAAT+TGG | - | chr5.2:77452271-77452290 | MS.gene030042:intron | 30.0% | |
CTTATATGTCACAATTGGAT+TGG | + | chr5.2:77449849-77449868 | None:intergenic | 30.0% | |
GACAGTAGTTAATCAAATCA+AGG | - | chr5.2:77449419-77449438 | MS.gene030042:CDS | 30.0% | |
GATGAGTACAATTTGACAAA+AGG | - | chr5.2:77449441-77449460 | MS.gene030042:CDS | 30.0% | |
GTTATATGATCCTGAAAAAG+AGG | - | chr5.2:77452475-77452494 | MS.gene030042:CDS | 30.0% | |
TAAAGTTCAATCTCTTCATC+AGG | + | chr5.2:77452679-77452698 | None:intergenic | 30.0% | |
TAACATCCAAACAAATTCAG+AGG | - | chr5.2:77450540-77450559 | MS.gene030042:CDS | 30.0% | |
TACAAGGAACAAACTGAATA+GGG | + | chr5.2:77449469-77449488 | None:intergenic | 30.0% | |
TATTGTTTGATCCTTCAAGA+GGG | - | chr5.2:77450367-77450386 | MS.gene030042:CDS | 30.0% | |
TCAAAGTTCAAGAACCTAAT+CGG | + | chr5.2:77448804-77448823 | None:intergenic | 30.0% | |
TCTATGTTTGATGGAAACAA+AGG | + | chr5.2:77453275-77453294 | None:intergenic | 30.0% | |
TGAAGAGATTGAACTTTATG+AGG | - | chr5.2:77452681-77452700 | MS.gene030042:intron | 30.0% | |
TGCAAGGATAATAATATGCA+GGG | + | chr5.2:77449663-77449682 | None:intergenic | 30.0% | |
TGCACATATTCTAAGTATGA+AGG | + | chr5.2:77453112-77453131 | None:intergenic | 30.0% | |
TTAATTTCCTGCACAACAAT+AGG | + | chr5.2:77452873-77452892 | None:intergenic | 30.0% | |
TTCAAATGATTCGTCATCTT+CGG | + | chr5.2:77453300-77453319 | None:intergenic | 30.0% | |
TTGAACTTAATTCCTTGTTC+AGG | - | chr5.2:77453247-77453266 | MS.gene030042:intron | 30.0% | |
TTTGTCAACATTCGTTTCTT+TGG | + | chr5.2:77453345-77453364 | None:intergenic | 30.0% | |
! | AAGTCTTGTAATTCTGTACA+AGG | - | chr5.2:77453542-77453561 | MS.gene030042:intron | 30.0% |
! | AATTTAATGTTTTATGGGCC+AGG | - | chr5.2:77451968-77451987 | MS.gene030042:CDS | 30.0% |
! | ACAATACTAATTTCTAGGGA+AGG | + | chr5.2:77450946-77450965 | None:intergenic | 30.0% |
! | ATACCTTTATAAAAGCGTAG+AGG | + | chr5.2:77450914-77450933 | None:intergenic | 30.0% |
! | ATATACACATGGTTTTCGTA+TGG | - | chr5.2:77452099-77452118 | MS.gene030042:intron | 30.0% |
! | ATCTTGCTTCTCAGAAATTT+TGG | + | chr5.2:77453996-77454015 | None:intergenic | 30.0% |
! | ATTCTCATGGATTGAAAAGA+CGG | + | chr5.2:77450113-77450132 | None:intergenic | 30.0% |
! | ATTGGCTTATATGTCACAAT+TGG | + | chr5.2:77449854-77449873 | None:intergenic | 30.0% |
! | ATTGTCCATTTGAATCGTTT+TGG | + | chr5.2:77449025-77449044 | None:intergenic | 30.0% |
! | GGACAATTAACAGATTTTCT+CGG | - | chr5.2:77449038-77449057 | MS.gene030042:CDS | 30.0% |
! | GTGGAAATGCACATAATTTT+GGG | - | chr5.2:77450237-77450256 | MS.gene030042:intron | 30.0% |
! | TAAAAGCATGATGCTTTAGT+TGG | - | chr5.2:77451460-77451479 | MS.gene030042:intron | 30.0% |
! | TGTGGAAATGCACATAATTT+TGG | - | chr5.2:77450236-77450255 | MS.gene030042:intron | 30.0% |
! | TTCCTCTTTCATTTTGTTCT+CGG | + | chr5.2:77450210-77450229 | None:intergenic | 30.0% |
! | TTTTGAATCAAACTGTAGGT+TGG | - | chr5.2:77452230-77452249 | MS.gene030042:intron | 30.0% |
! | TTTTGTGTTCTTTTACTTCC+CGG | + | chr5.2:77450869-77450888 | None:intergenic | 30.0% |
!! | AAGTGTTGAAGACAAAATTC+CGG | - | chr5.2:77454099-77454118 | MS.gene030042:intron | 30.0% |
!! | ACTTTAAGTGTTGAGAAGTT+GGG | - | chr5.2:77449615-77449634 | MS.gene030042:intron | 30.0% |
!! | ATGAACATCATGAGTTGATT+TGG | + | chr5.2:77449137-77449156 | None:intergenic | 30.0% |
!! | ATTGAGGGATATTGCTTTTA+AGG | - | chr5.2:77453613-77453632 | MS.gene030042:intron | 30.0% |
!! | TACCTGGCTTGATTTATTTT+GGG | + | chr5.2:77450503-77450522 | None:intergenic | 30.0% |
!! | TGAACATCATGAGTTGATTT+GGG | + | chr5.2:77449136-77449155 | None:intergenic | 30.0% |
!!! | ATTGGAATTGTTTTTGGAAG+TGG | - | chr5.2:77452289-77452308 | MS.gene030042:intron | 30.0% |
!!! | CTTTTTCTGTTGGTTTATTC+TGG | - | chr5.2:77450789-77450808 | MS.gene030042:intron | 30.0% |
!!! | GCTGACTAATTTTAAAGTGT+TGG | + | chr5.2:77453432-77453451 | None:intergenic | 30.0% |
!!! | TTCTATTGCACTTTTTCTGT+TGG | - | chr5.2:77450779-77450798 | MS.gene030042:intron | 30.0% |
!!! | TTTTAAAGTGTTGGATTTGC+TGG | + | chr5.2:77453423-77453442 | None:intergenic | 30.0% |
AAAAAAGCTACAAGGTGACA+GGG | - | chr5.2:77453970-77453989 | MS.gene030042:intron | 35.0% | |
AAAAGGAAGGTAGTCAAAGA+TGG | + | chr5.2:77452048-77452067 | None:intergenic | 35.0% | |
AAAGTCATGAGAAGCTCTAT+CGG | - | chr5.2:77454140-77454159 | MS.gene030042:intron | 35.0% | |
AACATATATTGGGGTAAAGG+TGG | - | chr5.2:77452532-77452551 | MS.gene030042:intron | 35.0% | |
AAGAAGAAATACACGAGTGA+TGG | - | chr5.2:77451400-77451419 | MS.gene030042:intron | 35.0% | |
AAGACACTGCTGAACATTTA+TGG | - | chr5.2:77450448-77450467 | MS.gene030042:intron | 35.0% | |
AATGCTTAGTCATGCAGTTT+AGG | + | chr5.2:77448837-77448856 | None:intergenic | 35.0% | |
AATTCCTGAAGAAGTTTCTC+AGG | + | chr5.2:77453596-77453615 | None:intergenic | 35.0% | |
AATTGAATTGGCCAATGTCA+CGG | - | chr5.2:77449960-77449979 | MS.gene030042:intron | 35.0% | |
ACCATGCATGTATGTTGAAA+AGG | - | chr5.2:77449506-77449525 | MS.gene030042:CDS | 35.0% | |
AGAAACTTCTTCAGGAATTG+AGG | - | chr5.2:77453597-77453616 | MS.gene030042:intron | 35.0% | |
AGACACTGCTGAACATTTAT+GGG | - | chr5.2:77450449-77450468 | MS.gene030042:intron | 35.0% | |
ATATGGCTTATGAACTTGCA+AGG | + | chr5.2:77452778-77452797 | None:intergenic | 35.0% | |
ATTCCTGAAGAAGTTTCTCA+GGG | + | chr5.2:77453595-77453614 | None:intergenic | 35.0% | |
ATTGCTCGATACTTATTAGG+TGG | - | chr5.2:77450986-77451005 | MS.gene030042:intron | 35.0% | |
ATTGGCGAAGATAAATACAC+AGG | + | chr5.2:77449248-77449267 | None:intergenic | 35.0% | |
CAATAAACTACAAAGGGATC+AGG | - | chr5.2:77450317-77450336 | MS.gene030042:intron | 35.0% | |
CCATGAATGCAGTTAGAAAA+TGG | - | chr5.2:77453019-77453038 | MS.gene030042:intron | 35.0% | |
CGTTAAATGATTTCTGCCTT+CGG | + | chr5.2:77451097-77451116 | None:intergenic | 35.0% | |
CTAATATGTGATCTAGGAAG+AGG | - | chr5.2:77451629-77451648 | MS.gene030042:intron | 35.0% | |
CTACAAGGAACAAACTGAAT+AGG | + | chr5.2:77449470-77449489 | None:intergenic | 35.0% | |
CTGCAAGGATAATAATATGC+AGG | + | chr5.2:77449664-77449683 | None:intergenic | 35.0% | |
CTTTGCCAAAACGATTCAAA+TGG | - | chr5.2:77449017-77449036 | MS.gene030042:CDS | 35.0% | |
GAAACTAACAATGAGGAAAG+TGG | + | chr5.2:77450029-77450048 | None:intergenic | 35.0% | |
GAAACTTCTTCAGGAATTGA+GGG | - | chr5.2:77453598-77453617 | MS.gene030042:intron | 35.0% | |
GAGAGAGAGAATAGTTGAAT+TGG | + | chr5.2:77449872-77449891 | None:intergenic | 35.0% | |
GAGATTGAACTTTATGAGGT+TGG | - | chr5.2:77452685-77452704 | MS.gene030042:intron | 35.0% | |
GCAAGGATAATAATATGCAG+GGG | + | chr5.2:77449662-77449681 | None:intergenic | 35.0% | |
GCATATGCAACATATACACA+TGG | - | chr5.2:77452088-77452107 | MS.gene030042:intron | 35.0% | |
GGTAACATAACTACCAAAAC+TGG | + | chr5.2:77450008-77450027 | None:intergenic | 35.0% | |
GTATTGTTTGATCCTTCAAG+AGG | - | chr5.2:77450366-77450385 | MS.gene030042:CDS | 35.0% | |
GTTCGTTTGTAACAACTACA+AGG | + | chr5.2:77449485-77449504 | None:intergenic | 35.0% | |
GTTTAGGCAGAGTTCAAATT+TGG | + | chr5.2:77450671-77450690 | None:intergenic | 35.0% | |
TAAAAAAGCTACAAGGTGAC+AGG | - | chr5.2:77453969-77453988 | MS.gene030042:intron | 35.0% | |
TCTTCGGATTCTATGTTTGA+TGG | + | chr5.2:77453284-77453303 | None:intergenic | 35.0% | |
TGGAAAATCTGCACTGAATT+TGG | - | chr5.2:77450809-77450828 | MS.gene030042:intron | 35.0% | |
TGGAATCTGGCGTATTAATA+TGG | - | chr5.2:77449735-77449754 | MS.gene030042:CDS | 35.0% | |
TTGAATCTTCTGATCTCTAC+TGG | - | chr5.2:77452811-77452830 | MS.gene030042:intron | 35.0% | |
! | ACTGCGTTGAAGTTAACTTT+TGG | + | chr5.2:77453674-77453693 | None:intergenic | 35.0% |
! | AGTTGAAGTACTATGCAATG+TGG | - | chr5.2:77450419-77450438 | MS.gene030042:intron | 35.0% |
! | CCAAGTTTTCAGCTAATTCA+CGG | - | chr5.2:77448914-77448933 | MS.gene030042:CDS | 35.0% |
! | CCATTTTCTAACTGCATTCA+TGG | + | chr5.2:77453022-77453041 | None:intergenic | 35.0% |
! | TAGCCTGGTATTTCTTTTTG+TGG | - | chr5.2:77453135-77453154 | MS.gene030042:intron | 35.0% |
! | TCACCTCTACGCTTTTATAA+AGG | - | chr5.2:77450908-77450927 | MS.gene030042:intron | 35.0% |
! | TCAGATGTATTTGAAGTTGG+TGG | - | chr5.2:77449082-77449101 | MS.gene030042:CDS | 35.0% |
! | TCCAGTTGATTAGCTGAATA+TGG | + | chr5.2:77450607-77450626 | None:intergenic | 35.0% |
! | TCCTTTTCAACATACATGCA+TGG | + | chr5.2:77449510-77449529 | None:intergenic | 35.0% |
! | TTTTTGCTCAAGTAACCTAC+TGG | - | chr5.2:77449580-77449599 | MS.gene030042:intron | 35.0% |
!! | AACGGAGCATGGTTTAATTT+TGG | + | chr5.2:77450742-77450761 | None:intergenic | 35.0% |
!! | ATAGGAGTATTGCATTCTCA+TGG | + | chr5.2:77450126-77450145 | None:intergenic | 35.0% |
!! | ATCGACAGAGTTTTATCAGA+AGG | - | chr5.2:77453503-77453522 | MS.gene030042:CDS | 35.0% |
!! | CACTTTAAGTGTTGAGAAGT+TGG | - | chr5.2:77449614-77449633 | MS.gene030042:intron | 35.0% |
!! | CATTTGAATCGTTTTGGCAA+AGG | + | chr5.2:77449019-77449038 | None:intergenic | 35.0% |
!! | CTACCTGGCTTGATTTATTT+TGG | + | chr5.2:77450504-77450523 | None:intergenic | 35.0% |
!! | GAACATCATGAGTTGATTTG+GGG | + | chr5.2:77449135-77449154 | None:intergenic | 35.0% |
!! | GGAAGTGATTTTGTTGTAGT+TGG | - | chr5.2:77449212-77449231 | MS.gene030042:CDS | 35.0% |
!! | TAAAGAATTAAGTGTTGGCC+TGG | + | chr5.2:77451989-77452008 | None:intergenic | 35.0% |
!! | TATTGCTTTTAAGGAGGACT+TGG | - | chr5.2:77453622-77453641 | MS.gene030042:intron | 35.0% |
!! | TCGACAGAGTTTTATCAGAA+GGG | - | chr5.2:77453504-77453523 | MS.gene030042:CDS | 35.0% |
!! | TTGAAGTTGGTGGCTATAAA+TGG | - | chr5.2:77449092-77449111 | MS.gene030042:CDS | 35.0% |
!!! | ACCTTGTAGCTTTTTTAGCT+TGG | + | chr5.2:77453966-77453985 | None:intergenic | 35.0% |
!!! | AGTTTCCTTTTCTAGTTCCT+AGG | - | chr5.2:77450043-77450062 | MS.gene030042:intron | 35.0% |
!!! | GTTTCCTTTTCTAGTTCCTA+GGG | - | chr5.2:77450044-77450063 | MS.gene030042:intron | 35.0% |
ACACCACTTGTGTACCATTA+AGG | - | chr5.2:77449802-77449821 | MS.gene030042:intron | 40.0% | |
ACCTTCTCAACAACATTGTG+AGG | - | chr5.2:77453765-77453784 | MS.gene030042:CDS | 40.0% | |
ACTCGTGTATTTCTTCTTCC+AGG | + | chr5.2:77451398-77451417 | None:intergenic | 40.0% | |
AGAAAATCCCCACTTTGTCA+TGG | + | chr5.2:77451070-77451089 | None:intergenic | 40.0% | |
AGAAGTTTCTCAGGGAGATT+AGG | + | chr5.2:77453587-77453606 | None:intergenic | 40.0% | |
AGAATATGTGCACAATAGCC+TGG | - | chr5.2:77453120-77453139 | MS.gene030042:intron | 40.0% | |
AGTTAACTTCAACGCAGTCA+AGG | - | chr5.2:77453676-77453695 | MS.gene030042:intron | 40.0% | |
ATAATAATATGCAGGGGTCG+GGG | + | chr5.2:77449656-77449675 | None:intergenic | 40.0% | |
ATCACCCTAGGAACTAGAAA+AGG | + | chr5.2:77450051-77450070 | None:intergenic | 40.0% | |
ATCCTGAAAAAGAGGAGCTA+CGG | - | chr5.2:77452483-77452502 | MS.gene030042:CDS | 40.0% | |
ATTCTGTACAAGGAGAAGTC+CGG | - | chr5.2:77453552-77453571 | MS.gene030042:intron | 40.0% | |
CATGTGACATTCCACCTTAA+TGG | + | chr5.2:77449819-77449838 | None:intergenic | 40.0% | |
CCAACATAACTGCCATCAAA+TGG | + | chr5.2:77452583-77452602 | None:intergenic | 40.0% | |
CCATCACATTGTTTCCTTCT+CGG | + | chr5.2:77449320-77449339 | None:intergenic | 40.0% | |
CCGTGAATTAGCTGAAAACT+TGG | + | chr5.2:77448917-77448936 | None:intergenic | 40.0% | |
CCTCACCAATTAGAACAAGT+CGG | - | chr5.2:77453731-77453750 | MS.gene030042:intron | 40.0% | |
CCTTGCAAAACAGATTGGAA+AGG | - | chr5.2:77451022-77451041 | MS.gene030042:intron | 40.0% | |
CTCCGAGAACAAAATGAAAG+AGG | - | chr5.2:77450205-77450224 | MS.gene030042:CDS | 40.0% | |
CTTGTAGACCATGACAAAGT+GGG | - | chr5.2:77451059-77451078 | MS.gene030042:intron | 40.0% | |
GAAACAAAGGAACCTGAACA+AGG | + | chr5.2:77453262-77453281 | None:intergenic | 40.0% | |
GAAGACCTTGCAAAACAGAT+TGG | - | chr5.2:77451017-77451036 | MS.gene030042:intron | 40.0% | |
GATAATAATATGCAGGGGTC+GGG | + | chr5.2:77449657-77449676 | None:intergenic | 40.0% | |
GCCAAGCTAAAAAAGCTACA+AGG | - | chr5.2:77453962-77453981 | MS.gene030042:intron | 40.0% | |
GCCATATTCAGCTAATCAAC+TGG | - | chr5.2:77450603-77450622 | MS.gene030042:intron | 40.0% | |
GGATAATAATATGCAGGGGT+CGG | + | chr5.2:77449658-77449677 | None:intergenic | 40.0% | |
GGATCAAACAATACACCATG+AGG | + | chr5.2:77450360-77450379 | None:intergenic | 40.0% | |
GGATTGAAAAGACGGTTACA+AGG | + | chr5.2:77450105-77450124 | None:intergenic | 40.0% | |
GTCTTCTTCAGTAGTGCAAT+GGG | + | chr5.2:77452428-77452447 | None:intergenic | 40.0% | |
TAGACTTAGTGAGCATCAAC+TGG | + | chr5.2:77452970-77452989 | None:intergenic | 40.0% | |
TCCAATTCAGTTTGAACCTC+CGG | + | chr5.2:77454121-77454140 | None:intergenic | 40.0% | |
TCCTCACAATGTTGTTGAGA+AGG | + | chr5.2:77453769-77453788 | None:intergenic | 40.0% | |
TCTGCACTGAATTTGGACAA+CGG | - | chr5.2:77450816-77450835 | MS.gene030042:intron | 40.0% | |
TCTTGTAGACCATGACAAAG+TGG | - | chr5.2:77451058-77451077 | MS.gene030042:intron | 40.0% | |
TGTCTTCTTCAGTAGTGCAA+TGG | + | chr5.2:77452429-77452448 | None:intergenic | 40.0% | |
TGTTGAAGACAAAATTCCGG+AGG | - | chr5.2:77454102-77454121 | MS.gene030042:intron | 40.0% | |
TTCACAAGATACCCTCTTGA+AGG | + | chr5.2:77450381-77450400 | None:intergenic | 40.0% | |
TTCACAGAGTTCATACCTCA+TGG | - | chr5.2:77450342-77450361 | MS.gene030042:CDS | 40.0% | |
TTGTAGACCATGACAAAGTG+GGG | - | chr5.2:77451060-77451079 | MS.gene030042:intron | 40.0% | |
! | AATACACGAGTGATGGAAGT+TGG | - | chr5.2:77451407-77451426 | MS.gene030042:intron | 40.0% |
! | ACACAAGTGCAATCCAGTTT+TGG | - | chr5.2:77449992-77450011 | MS.gene030042:intron | 40.0% |
! | ACTTGATTTGATCATCAGCG+AGG | + | chr5.2:77454075-77454094 | None:intergenic | 40.0% |
! | ATACACGAGTGATGGAAGTT+GGG | - | chr5.2:77451408-77451427 | MS.gene030042:intron | 40.0% |
! | CCATTTGATGGCAGTTATGT+TGG | - | chr5.2:77452580-77452599 | MS.gene030042:intron | 40.0% |
! | CCTTTCCAATCTGTTTTGCA+AGG | + | chr5.2:77451025-77451044 | None:intergenic | 40.0% |
! | CGACTTGTTCTAATTGGTGA+GGG | + | chr5.2:77453733-77453752 | None:intergenic | 40.0% |
! | GACTTGTTCTAATTGGTGAG+GGG | + | chr5.2:77453732-77453751 | None:intergenic | 40.0% |
! | GAGAGTTGAGTTGTGTTTGT+TGG | + | chr5.2:77453916-77453935 | None:intergenic | 40.0% |
! | GTTAGCCCTCTGAATTTGTT+TGG | + | chr5.2:77450549-77450568 | None:intergenic | 40.0% |
! | TCTAAGTATGAAGGCACATC+AGG | + | chr5.2:77453103-77453122 | None:intergenic | 40.0% |
! | TTGATGGCAGTTATGTTGGA+AGG | - | chr5.2:77452584-77452603 | MS.gene030042:intron | 40.0% |
!! | AATTCCAGCGCTTTTGGTTA+TGG | - | chr5.2:77451679-77451698 | MS.gene030042:intron | 40.0% |
!! | CGTGTACTTATTTTCCGAGA+AGG | - | chr5.2:77449303-77449322 | MS.gene030042:CDS | 40.0% |
!! | GAGGGATATTGCTTTTAAGG+AGG | - | chr5.2:77453616-77453635 | MS.gene030042:intron | 40.0% |
!! | GGTTTTCGTATGGAGTGTTT+TGG | - | chr5.2:77452109-77452128 | MS.gene030042:intron | 40.0% |
!!! | TGGGCATAGCAGTGTTATTT+TGG | - | chr5.2:77450256-77450275 | MS.gene030042:intron | 40.0% |
AATCGTGCCTATTGTTGTGC+AGG | - | chr5.2:77452863-77452882 | MS.gene030042:intron | 45.0% | |
ACAGGCTCACACATGACATT+TGG | + | chr5.2:77452903-77452922 | None:intergenic | 45.0% | |
ACATTGTCTCGCTGCATTGT+AGG | - | chr5.2:77448867-77448886 | MS.gene030042:CDS | 45.0% | |
AGAAGCTCTATCGGAACTTC+AGG | - | chr5.2:77454149-77454168 | MS.gene030042:intron | 45.0% | |
AGGAGAGGTTGAAGAAAGAC+CGG | - | chr5.2:77450847-77450866 | MS.gene030042:intron | 45.0% | |
AGGCTCTTTGTGAACTGTAC+TGG | - | chr5.2:77452604-77452623 | MS.gene030042:intron | 45.0% | |
AGTTATTGGCAAACGGAGCA+TGG | + | chr5.2:77450753-77450772 | None:intergenic | 45.0% | |
ATCATACCTGTCGACCTTCT+CGG | - | chr5.2:77451715-77451734 | MS.gene030042:intron | 45.0% | |
CAGTGACAGATACTCCGATT+AGG | - | chr5.2:77448787-77448806 | MS.gene030042:CDS | 45.0% | |
CCACCTTAATGGTACACAAG+TGG | + | chr5.2:77449808-77449827 | None:intergenic | 45.0% | |
CCACTTGTGTACCATTAAGG+TGG | - | chr5.2:77449805-77449824 | MS.gene030042:intron | 45.0% | |
CCGAGAAGGAAACAATGTGA+TGG | - | chr5.2:77449317-77449336 | MS.gene030042:CDS | 45.0% | |
CTGCACTGAATTTGGACAAC+GGG | - | chr5.2:77450817-77450836 | MS.gene030042:intron | 45.0% | |
CTTCCCACAATAGATAGAGC+CGG | + | chr5.2:77449197-77449216 | None:intergenic | 45.0% | |
GAAGCTCTATCGGAACTTCA+GGG | - | chr5.2:77454150-77454169 | MS.gene030042:intron | 45.0% | |
GCCAATTCAATTGTGACACG+TGG | + | chr5.2:77449952-77449971 | None:intergenic | 45.0% | |
GCCACGTGTCACAATTGAAT+TGG | - | chr5.2:77449948-77449967 | MS.gene030042:intron | 45.0% | |
GCTGGTATCTTCAACATGAG+TGG | + | chr5.2:77453405-77453424 | None:intergenic | 45.0% | |
GCTTCCTCAATGTGTGTCAA+AGG | + | chr5.2:77451741-77451760 | None:intergenic | 45.0% | |
GGAGATTAGGATCCAGTTTC+CGG | + | chr5.2:77453574-77453593 | None:intergenic | 45.0% | |
GGCCCAAAATAAATCAAGCC+AGG | - | chr5.2:77450498-77450517 | MS.gene030042:intron | 45.0% | |
GGTGGAATGTCACATGACAT+TGG | - | chr5.2:77449823-77449842 | MS.gene030042:intron | 45.0% | |
GTCTGCGAAAGAAGTCTTTG+AGG | + | chr5.2:77453894-77453913 | None:intergenic | 45.0% | |
GTGACATAATGCCGTGACAT+TGG | + | chr5.2:77449974-77449993 | None:intergenic | 45.0% | |
TCCGGAGGTTCAAACTGAAT+TGG | - | chr5.2:77454117-77454136 | MS.gene030042:intron | 45.0% | |
TCTCCCTGAGAAACTTCTTC+AGG | - | chr5.2:77453589-77453608 | MS.gene030042:intron | 45.0% | |
TGAAGCTCAGCAGTCAAAAG+TGG | - | chr5.2:77453370-77453389 | MS.gene030042:intron | 45.0% | |
TTGACACACATTGAGGAAGC+AGG | - | chr5.2:77451741-77451760 | MS.gene030042:CDS | 45.0% | |
TTTGATCATCAGCGAGGTGA+TGG | + | chr5.2:77454069-77454088 | None:intergenic | 45.0% | |
TTTGGACAACGGGATTATGC+AGG | - | chr5.2:77450827-77450846 | MS.gene030042:intron | 45.0% | |
! | ATAGCCGGCTCTATCTATTG+TGG | - | chr5.2:77449190-77449209 | MS.gene030042:CDS | 45.0% |
! | ATGAAGGCACATCAGGATAG+CGG | + | chr5.2:77453096-77453115 | None:intergenic | 45.0% |
! | CCGACTTGTTCTAATTGGTG+AGG | + | chr5.2:77453734-77453753 | None:intergenic | 45.0% |
! | TACCGTAGCTCCTCTTTTTC+AGG | + | chr5.2:77452488-77452507 | None:intergenic | 45.0% |
! | TAGCCGGCTCTATCTATTGT+GGG | - | chr5.2:77449191-77449210 | MS.gene030042:CDS | 45.0% |
! | TCTAGTTCCTAGGGTGATAG+TGG | - | chr5.2:77450053-77450072 | MS.gene030042:intron | 45.0% |
! | TGCAGATTCAGCTAGTTTGC+CGG | - | chr5.2:77449365-77449384 | MS.gene030042:CDS | 45.0% |
! | TGGGGATTTTCTATGTCCGA+AGG | - | chr5.2:77451078-77451097 | MS.gene030042:intron | 45.0% |
! | TTTGCCATAACCAAAAGCGC+TGG | + | chr5.2:77451686-77451705 | None:intergenic | 45.0% |
!! | CAGCACCGACTTGTTCTAAT+TGG | + | chr5.2:77453739-77453758 | None:intergenic | 45.0% |
!!! | TGTTTTTGGAAGTGGAGCGT+GGG | - | chr5.2:77452297-77452316 | MS.gene030042:intron | 45.0% |
!!! | TTGTTTTTGGAAGTGGAGCG+TGG | - | chr5.2:77452296-77452315 | MS.gene030042:intron | 45.0% |
!!! | TATTTTTTCATAAAATAAAA+GGG | - | chr5.2:77449770-77449789 | MS.gene030042:CDS | 5.0% |
!!! | TTATTTTTTCATAAAATAAA+AGG | - | chr5.2:77449769-77449788 | MS.gene030042:CDS | 5.0% |
ACAACGGGATTATGCAGGAG+AGG | - | chr5.2:77450832-77450851 | MS.gene030042:intron | 50.0% | |
ACAAGGAGAAGTCCGGAAAC+TGG | - | chr5.2:77453559-77453578 | MS.gene030042:intron | 50.0% | |
ACACATCTGCTCCAACCATC+CGG | + | chr5.2:77449387-77449406 | None:intergenic | 50.0% | |
ACCTGAAACTGCCAACACTG+TGG | - | chr5.2:77448991-77449010 | MS.gene030042:CDS | 50.0% | |
ACTCCGCTCAATCAAGTGAC+TGG | - | chr5.2:77451345-77451364 | MS.gene030042:intron | 50.0% | |
AGTGTGTTTGTCCAGCCAGT+AGG | + | chr5.2:77449598-77449617 | None:intergenic | 50.0% | |
ATGTGTGTCAAAGGCCGAGA+AGG | + | chr5.2:77451732-77451751 | None:intergenic | 50.0% | |
ATTCCCAGCTTGCAATGTCC+TGG | - | chr5.2:77451377-77451396 | MS.gene030042:intron | 50.0% | |
CACCCAGTCACTTGATTGAG+CGG | + | chr5.2:77451351-77451370 | None:intergenic | 50.0% | |
CTCCGCTCAATCAAGTGACT+GGG | - | chr5.2:77451346-77451365 | MS.gene030042:intron | 50.0% | |
CTTCCAGGACATTGCAAGCT+GGG | + | chr5.2:77451383-77451402 | None:intergenic | 50.0% | |
GGAGAGGTTGAAGAAAGACC+GGG | - | chr5.2:77450848-77450867 | MS.gene030042:intron | 50.0% | |
GTTGAGAAGTTGGGAATCCG+AGG | - | chr5.2:77449624-77449643 | MS.gene030042:intron | 50.0% | |
TCGGCCTTTGACACACATTG+AGG | - | chr5.2:77451734-77451753 | MS.gene030042:CDS | 50.0% | |
TCGTGCATGCACAACTCAGT+TGG | + | chr5.2:77449690-77449709 | None:intergenic | 50.0% | |
TCTTCCAGGACATTGCAAGC+TGG | + | chr5.2:77451384-77451403 | None:intergenic | 50.0% | |
TGCTCAAGTAACCTACTGGC+TGG | - | chr5.2:77449584-77449603 | MS.gene030042:intron | 50.0% | |
TGGCAAAGGATCCACAGTGT+TGG | + | chr5.2:77449005-77449024 | None:intergenic | 50.0% | |
! | CAGCTCAATTCCAGCGCTTT+TGG | - | chr5.2:77451673-77451692 | MS.gene030042:intron | 50.0% |
! | GAAGAGGTTGCTGTTGCGTT+TGG | - | chr5.2:77451645-77451664 | MS.gene030042:intron | 50.0% |
! | GATTCAGCTAGTTTGCCGGA+TGG | - | chr5.2:77449369-77449388 | MS.gene030042:CDS | 50.0% |
!! | CAAAAGCGCTGGAATTGAGC+TGG | + | chr5.2:77451675-77451694 | None:intergenic | 50.0% |
!! | CAACTCAGTTGGTAGCTGCA+AGG | + | chr5.2:77449679-77449698 | None:intergenic | 50.0% |
!! | TCCACAGTGTTGGCAGTTTC+AGG | + | chr5.2:77448995-77449014 | None:intergenic | 50.0% |
CTCTCAGCCACTATCACCCT+AGG | + | chr5.2:77450063-77450082 | None:intergenic | 55.0% | |
! | CAGCTAGTTTGCCGGATGGT+TGG | - | chr5.2:77449373-77449392 | MS.gene030042:CDS | 55.0% |
!! | CTAGGGTGATAGTGGCTGAG+AGG | - | chr5.2:77450061-77450080 | MS.gene030042:intron | 55.0% |
CAAAGGCCGAGAAGGTCGAC+AGG | + | chr5.2:77451724-77451743 | None:intergenic | 60.0% | |
TTTGGAAGTGGAGCGTGGGC+TGG | - | chr5.2:77452301-77452320 | MS.gene030042:intron | 60.0% | |
AGGGGTCGGGGTTCGAACCT+CGG | + | chr5.2:77449644-77449663 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 77448657 | 77454189 | 77448657 | ID=MS.gene030042 |
chr5.2 | mRNA | 77448657 | 77454189 | 77448657 | ID=MS.gene030042.t1;Parent=MS.gene030042 |
chr5.2 | exon | 77454165 | 77454189 | 77454165 | ID=MS.gene030042.t1.exon1;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77454165 | 77454189 | 77454165 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77453733 | 77453865 | 77453733 | ID=MS.gene030042.t1.exon2;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77453733 | 77453865 | 77453733 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77453384 | 77453544 | 77453384 | ID=MS.gene030042.t1.exon3;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77453384 | 77453544 | 77453384 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77452376 | 77452545 | 77452376 | ID=MS.gene030042.t1.exon4;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77452376 | 77452545 | 77452376 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77451917 | 77451997 | 77451917 | ID=MS.gene030042.t1.exon5;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77451917 | 77451997 | 77451917 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77451722 | 77451841 | 77451722 | ID=MS.gene030042.t1.exon6;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77451722 | 77451841 | 77451722 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77451079 | 77451201 | 77451079 | ID=MS.gene030042.t1.exon7;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77451079 | 77451201 | 77451079 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77450524 | 77450598 | 77450524 | ID=MS.gene030042.t1.exon8;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77450524 | 77450598 | 77450524 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77450342 | 77450430 | 77450342 | ID=MS.gene030042.t1.exon9;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77450342 | 77450430 | 77450342 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77450144 | 77450252 | 77450144 | ID=MS.gene030042.t1.exon10;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77450144 | 77450252 | 77450144 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77449893 | 77449961 | 77449893 | ID=MS.gene030042.t1.exon11;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77449893 | 77449961 | 77449893 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77449705 | 77449815 | 77449705 | ID=MS.gene030042.t1.exon12;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77449705 | 77449815 | 77449705 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
chr5.2 | exon | 77448657 | 77449577 | 77448657 | ID=MS.gene030042.t1.exon13;Parent=MS.gene030042.t1 |
chr5.2 | CDS | 77448657 | 77449577 | 77448657 | ID=cds.MS.gene030042.t1;Parent=MS.gene030042.t1 |
Gene Sequence |
Protein sequence |