Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017115.t1 | AET00387.2 | 53.2 | 662 | 141 | 8 | 2 | 495 | 108 | 768 | 5.50E-158 | 567.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017115.t1 | Q84WU2 | 45.9 | 294 | 105 | 6 | 48 | 288 | 527 | 819 | 1.6e-60 | 235.3 |
| MS.gene017115.t1 | Q84WU2 | 46.8 | 47 | 25 | 0 | 2 | 48 | 129 | 175 | 5.5e-05 | 50.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017115.t1 | G7KD59 | 53.2 | 662 | 141 | 8 | 2 | 495 | 108 | 768 | 4.0e-158 | 567.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017115.t1 | MTR_5g091530 | 79.487 | 351 | 36 | 4 | 2 | 319 | 36 | 383 | 0.0 | 545 |
| MS.gene017115.t1 | MTR_5g091180 | 54.730 | 592 | 155 | 7 | 3 | 492 | 122 | 702 | 0.0 | 531 |
| MS.gene017115.t1 | MTR_5g091430 | 56.622 | 521 | 139 | 6 | 61 | 496 | 9 | 527 | 6.22e-179 | 515 |
| MS.gene017115.t1 | MTR_5g091410 | 54.858 | 494 | 149 | 6 | 61 | 490 | 38 | 521 | 6.79e-157 | 459 |
| MS.gene017115.t1 | MTR_5g091450 | 51.126 | 444 | 152 | 9 | 2 | 391 | 108 | 540 | 2.33e-125 | 386 |
| MS.gene017115.t1 | MTR_5g091450 | 65.455 | 220 | 49 | 2 | 303 | 495 | 549 | 768 | 1.94e-73 | 249 |
| MS.gene017115.t1 | MTR_5g091550 | 51.813 | 386 | 108 | 8 | 3 | 311 | 94 | 478 | 4.63e-102 | 316 |
| MS.gene017115.t1 | MTR_5g091550 | 51.151 | 391 | 108 | 8 | 3 | 311 | 94 | 483 | 2.65e-101 | 314 |
| MS.gene017115.t1 | MTR_5g086700 | 57.447 | 282 | 68 | 4 | 48 | 277 | 533 | 814 | 4.13e-89 | 297 |
| MS.gene017115.t1 | MTR_5g086700 | 57.447 | 282 | 68 | 4 | 48 | 277 | 533 | 814 | 4.29e-89 | 297 |
| MS.gene017115.t1 | MTR_3g079840 | 53.401 | 294 | 84 | 5 | 48 | 288 | 529 | 822 | 3.32e-86 | 289 |
| MS.gene017115.t1 | MTR_3g079840 | 53.401 | 294 | 84 | 5 | 48 | 288 | 528 | 821 | 3.70e-86 | 289 |
| MS.gene017115.t1 | MTR_1g041240 | 46.263 | 281 | 98 | 5 | 48 | 275 | 530 | 810 | 6.41e-66 | 232 |
| MS.gene017115.t1 | MTR_1g041240 | 46.263 | 281 | 98 | 5 | 48 | 275 | 529 | 809 | 6.64e-66 | 232 |
| MS.gene017115.t1 | MTR_1g041240 | 46.263 | 281 | 98 | 5 | 48 | 275 | 528 | 808 | 7.07e-66 | 232 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene017115.t1 | AT3G11910 | 47.445 | 274 | 91 | 5 | 48 | 269 | 527 | 799 | 1.18e-66 | 234 |
| MS.gene017115.t1 | AT3G11910 | 47.445 | 274 | 91 | 5 | 48 | 269 | 527 | 799 | 1.18e-66 | 234 |
| MS.gene017115.t1 | AT3G11910 | 47.445 | 274 | 91 | 5 | 48 | 269 | 526 | 798 | 1.30e-66 | 234 |
| MS.gene017115.t1 | AT3G11910 | 47.445 | 274 | 91 | 5 | 48 | 269 | 526 | 798 | 1.30e-66 | 234 |
| MS.gene017115.t1 | AT5G06600 | 48.364 | 275 | 86 | 6 | 48 | 269 | 529 | 800 | 4.33e-66 | 231 |
| MS.gene017115.t1 | AT5G06600 | 48.364 | 275 | 86 | 6 | 48 | 269 | 529 | 800 | 1.11e-65 | 231 |
| MS.gene017115.t1 | AT5G06600 | 48.364 | 275 | 86 | 6 | 48 | 269 | 528 | 799 | 1.23e-65 | 231 |
Find 90 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAGAGAATTACAAGACTTTA+AGG | 0.077990 | 5.1:+73107710 | None:intergenic |
| CTTAACAAGGTTAAATAATT+TGG | 0.097053 | 5.1:-73108699 | MS.gene017115:CDS |
| ATTGAGGGATATTGCCTTTA+AGG | 0.137058 | 5.1:-73107631 | MS.gene017115:CDS |
| TTCAACCAACTCCTCCTTAA+AGG | 0.148491 | 5.1:+73107617 | None:intergenic |
| ATCTTGCTTCTCAGCAATTT+TGG | 0.185648 | 5.1:+73107251 | None:intergenic |
| CCTTCAATACTTCATTATTT+TGG | 0.209111 | 5.1:+73107397 | None:intergenic |
| TTTGTCAACATTCATTTCTT+TGG | 0.228081 | 5.1:+73107898 | None:intergenic |
| GGAGATTAGGATCCAGTTTC+CGG | 0.240907 | 5.1:+73107673 | None:intergenic |
| GAAATCATTTAACGATTTAA+AGG | 0.242254 | 5.1:-73110208 | MS.gene017115:intron |
| CCATGAATGCAGTTAGAAAA+TGG | 0.255703 | 5.1:-73108220 | MS.gene017115:intron |
| CCCTTTGTAGTTTATTGAAT+TGG | 0.259561 | 5.1:+73110980 | None:intergenic |
| CAGCACCGACTTGTTCTAAT+TGG | 0.263642 | 5.1:+73107508 | None:intergenic |
| CAGTTCAATTCCAGCGCTTT+TGG | 0.294504 | 5.1:-73109638 | MS.gene017115:CDS |
| AGCAAATACATAAATCAAAA+TGG | 0.313333 | 5.1:+73107064 | None:intergenic |
| AGAAGCTCTATCGGAACTTC+AGG | 0.317651 | 5.1:-73107096 | MS.gene017115:CDS |
| TCTTCGGATTCTGTGTTTGA+TGG | 0.323891 | 5.1:+73107959 | None:intergenic |
| TTCAAATGATTCTTCATCTT+CGG | 0.337120 | 5.1:+73107943 | None:intergenic |
| ACTGCACTGAAGTTAACTTT+TGG | 0.341480 | 5.1:+73107573 | None:intergenic |
| AAAACAGCTATAGGCTGAAT+TGG | 0.351628 | 5.1:+73107008 | None:intergenic |
| CTATGATGACATAGTAGAAT+TGG | 0.362771 | 5.1:-73109084 | MS.gene017115:CDS |
| AATGTTAATTTCTTGTCAAC+AGG | 0.368724 | 5.1:+73108322 | None:intergenic |
| ATCATACCTGTCGACCTTCA+TGG | 0.376347 | 5.1:-73109596 | MS.gene017115:CDS |
| AATTCCTGAAGAAGTTTCTC+AGG | 0.378200 | 5.1:+73107651 | None:intergenic |
| TCCGGAGGCTCAAACTGAAT+TGG | 0.378534 | 5.1:-73107128 | MS.gene017115:CDS |
| CCAAAATAATGAAGTATTGA+AGG | 0.383089 | 5.1:-73107397 | MS.gene017115:intron |
| TCCAATTCAGTTTGAGCCTC+CGG | 0.384741 | 5.1:+73107127 | None:intergenic |
| AGAGCAAAACGAAAACATTA+TGG | 0.392871 | 5.1:-73107921 | MS.gene017115:CDS |
| AGGAGAAGAAGTCCGGAAAC+TGG | 0.401931 | 5.1:-73107685 | MS.gene017115:CDS |
| GAAGAGGTTGCTGTTGCGTT+TGG | 0.405527 | 5.1:-73109666 | MS.gene017115:CDS |
| AGAAGTTTCTCAGGGAGATT+AGG | 0.408806 | 5.1:+73107660 | None:intergenic |
| CAGTCAAATAAAACAGCTAT+AGG | 0.409494 | 5.1:+73106999 | None:intergenic |
| TCTCCCTGAGAAACTTCTTC+AGG | 0.409514 | 5.1:-73107655 | MS.gene017115:CDS |
| CGTTAAATGATTTCTGCCTT+CGG | 0.427870 | 5.1:+73110217 | None:intergenic |
| AAAGTGTTGAAATAAAATTC+CGG | 0.432020 | 5.1:-73107146 | MS.gene017115:CDS |
| ACAGGCTCACACATGACATT+TGG | 0.434821 | 5.1:+73108340 | None:intergenic |
| ATTAACATTTCAAGAAAGTC+AGG | 0.436868 | 5.1:-73108308 | MS.gene017115:intron |
| AGAAACTTCTTCAGGAATTG+AGG | 0.439153 | 5.1:-73107647 | MS.gene017115:CDS |
| TAAAGTTCAATCTCTTCATC+AGG | 0.447128 | 5.1:+73108665 | None:intergenic |
| TTCACAAGATACCCTCTTGA+AGG | 0.453357 | 5.1:+73110913 | None:intergenic |
| GTAAAATGATGTGGCCGAAA+AGG | 0.459418 | 5.1:+73107038 | None:intergenic |
| ACAAGGTTAAATAATTTGGC+TGG | 0.463059 | 5.1:-73108695 | MS.gene017115:CDS |
| TCTAAGAACGAAGGCACGTC+AGG | 0.463135 | 5.1:+73108139 | None:intergenic |
| CAAAAGCGCTGGAATTGAAC+TGG | 0.469420 | 5.1:+73109639 | None:intergenic |
| TGAAGAGATTGAACTTTATG+AGG | 0.473021 | 5.1:-73108660 | MS.gene017115:intron |
| CTCTACAAGGAGAAGAAGTC+CGG | 0.474818 | 5.1:-73107692 | MS.gene017115:CDS |
| GAAGACCTTGCAAAACAGAT+TGG | 0.475233 | 5.1:-73110294 | MS.gene017115:CDS |
| GAAACTTCTTCAGGAATTGA+GGG | 0.478362 | 5.1:-73107646 | MS.gene017115:CDS |
| GATGAGTACAATTTGACAAA+AGG | 0.484355 | 5.1:-73111879 | MS.gene017115:intron |
| CCAATTCAATAAACTACAAA+GGG | 0.495186 | 5.1:-73110980 | MS.gene017115:CDS |
| AACCTTGTTAAGATTTCTGA+TGG | 0.497935 | 5.1:+73108710 | None:intergenic |
| TATTGCCTTTAAGGAGGAGT+TGG | 0.503483 | 5.1:-73107622 | MS.gene017115:CDS |
| AGGCTCTTTGTGAACTGTAC+TGG | 0.518894 | 5.1:-73108737 | MS.gene017115:CDS |
| AGAATATGTGCACAATAGCC+TGG | 0.523453 | 5.1:-73108119 | MS.gene017115:intron |
| TTTGGAAGTGGAGCATGGGC+TGG | 0.528941 | 5.1:-73109054 | MS.gene017115:intron |
| TCCTCACAATGTTGTTGAGA+AGG | 0.539367 | 5.1:+73107478 | None:intergenic |
| TTTGCCATAACCAAAAGCGC+TGG | 0.542123 | 5.1:+73109628 | None:intergenic |
| CAAAAGCCATGAAGGTCGAC+AGG | 0.543531 | 5.1:+73109590 | None:intergenic |
| TTCACAATGTTCATACCTCA+TGG | 0.544169 | 5.1:-73110949 | MS.gene017115:CDS |
| CGACTTGTTCTAATTGGTGA+GGG | 0.546345 | 5.1:+73107514 | None:intergenic |
| TCCAATTCAATAAACTACAA+AGG | 0.551229 | 5.1:-73110981 | MS.gene017115:CDS |
| GAAGCTCTATCGGAACTTCA+GGG | 0.553222 | 5.1:-73107095 | MS.gene017115:CDS |
| CTTGTAGACCATGACAAAGT+GGG | 0.554203 | 5.1:-73110252 | MS.gene017115:CDS |
| GGCATTTAAGTAAAATGATG+TGG | 0.556182 | 5.1:+73107029 | None:intergenic |
| AAGTCTTGTAATTCTCTACA+AGG | 0.558858 | 5.1:-73107705 | MS.gene017115:CDS |
| ACCTTCTCAACAACATTGTG+AGG | 0.565464 | 5.1:-73107479 | MS.gene017115:CDS |
| AAAGTCATGAGAAGCTCTAT+CGG | 0.566750 | 5.1:-73107105 | MS.gene017115:CDS |
| ATGTGTGTCAAAAGCCATGA+AGG | 0.567188 | 5.1:+73109582 | None:intergenic |
| TCTGTGTTTGATGGAAACAA+AGG | 0.582050 | 5.1:+73107968 | None:intergenic |
| ATTCCTGAAGAAGTTTCTCA+GGG | 0.592417 | 5.1:+73107652 | None:intergenic |
| GAGGGATATTGCCTTTAAGG+AGG | 0.597294 | 5.1:-73107628 | MS.gene017115:CDS |
| CCGACTTGTTCTAATTGGTG+AGG | 0.600412 | 5.1:+73107513 | None:intergenic |
| AGTTAACTTCAGTGCAGTCA+AGG | 0.600774 | 5.1:-73107568 | MS.gene017115:CDS |
| AGAAAATCCCCACTTTGTCA+TGG | 0.605929 | 5.1:+73110244 | None:intergenic |
| ACGAAGGCACGTCAGGATAG+CGG | 0.606635 | 5.1:+73108146 | None:intergenic |
| AATACATAAATCAAAATGGA+GGG | 0.608058 | 5.1:+73107068 | None:intergenic |
| TCTTGTAGACCATGACAAAG+TGG | 0.610853 | 5.1:-73110253 | MS.gene017115:CDS |
| CCTTGCAAAACAGATTGGAA+AGG | 0.615901 | 5.1:-73110289 | MS.gene017115:CDS |
| GTATTGTTTGATCCTTCAAG+AGG | 0.618754 | 5.1:-73110925 | MS.gene017115:CDS |
| TATTGTTTGATCCTTCAAGA+GGG | 0.630610 | 5.1:-73110924 | MS.gene017115:CDS |
| AAATACATAAATCAAAATGG+AGG | 0.645252 | 5.1:+73107067 | None:intergenic |
| GACTTGTTCTAATTGGTGAG+GGG | 0.645704 | 5.1:+73107515 | None:intergenic |
| TTGTAGACCATGACAAAGTG+GGG | 0.654926 | 5.1:-73110251 | MS.gene017115:CDS |
| TTTGAAAATAGAGCAAGACT+CGG | 0.672282 | 5.1:-73107436 | MS.gene017115:CDS |
| CCTCACCAATTAGAACAAGT+CGG | 0.677460 | 5.1:-73107513 | MS.gene017115:CDS |
| TGCACATATTCTAAGAACGA+AGG | 0.677665 | 5.1:+73108130 | None:intergenic |
| ACTTGATTTGATCATCAGCG+AGG | 0.683715 | 5.1:+73107172 | None:intergenic |
| AACCATCAGAAATCTTAACA+AGG | 0.687778 | 5.1:-73108712 | MS.gene017115:CDS |
| GGATCAAACAATACACCATG+AGG | 0.690377 | 5.1:+73110934 | None:intergenic |
| GTGTTGAAATAAAATTCCGG+AGG | 0.714653 | 5.1:-73107143 | MS.gene017115:CDS |
| AGTTGAAGTACTATGCAATG+TGG | 0.739926 | 5.1:-73110878 | MS.gene017115:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATTTAAAGAAACAAA+AGG | + | chr5.1:73109596-73109615 | None:intergenic | 10.0% |
| !! | TATTTATTCATAAAGTAAAA+GGG | - | chr5.1:73107340-73107359 | MS.gene017115:intron | 10.0% |
| !! | TTATTTATTCATAAAGTAAA+AGG | - | chr5.1:73107339-73107358 | MS.gene017115:intron | 10.0% |
| !!! | AATAAAAAAAGTATTAGTTT+AGG | + | chr5.1:73108261-73108280 | None:intergenic | 10.0% |
| !! | AAAAAAATATGACATAGTTT+CGG | + | chr5.1:73108217-73108236 | None:intergenic | 15.0% |
| !! | AAAAAAGGATAAGAATAAAT+GGG | + | chr5.1:73110857-73110876 | None:intergenic | 15.0% |
| !! | ATTTATTCATAAAGTAAAAG+GGG | - | chr5.1:73107341-73107360 | MS.gene017115:intron | 15.0% |
| !! | TAAAAAAGGATAAGAATAAA+TGG | + | chr5.1:73110858-73110877 | None:intergenic | 15.0% |
| !! | TTTCTTGATTATGATTTATT+AGG | + | chr5.1:73108803-73108822 | None:intergenic | 15.0% |
| !!! | ATTTATTCTTATCCTTTTTT+AGG | - | chr5.1:73110857-73110876 | MS.gene017115:CDS | 15.0% |
| !!! | TAATAATATAGTTTGTCAAT+AGG | + | chr5.1:73109920-73109939 | None:intergenic | 15.0% |
| !! | AAAGAACAATACTAATTTCT+AGG | + | chr5.1:73108524-73108543 | None:intergenic | 20.0% |
| !! | AAATAACAAAAAGAAATACC+AGG | + | chr5.1:73110786-73110805 | None:intergenic | 20.0% |
| !! | AAATACATAAATCAAAATGG+AGG | + | chr5.1:73111820-73111839 | None:intergenic | 20.0% |
| !! | AAGAACAATACTAATTTCTA+GGG | + | chr5.1:73108523-73108542 | None:intergenic | 20.0% |
| !! | AATACATAAATCAAAATGGA+GGG | + | chr5.1:73111819-73111838 | None:intergenic | 20.0% |
| !! | AATACATTTGATATCAACTA+AGG | + | chr5.1:73110102-73110121 | None:intergenic | 20.0% |
| !! | AATTTAAAGAAACAAAAGGA+AGG | + | chr5.1:73109592-73109611 | None:intergenic | 20.0% |
| !! | AGCAAATACATAAATCAAAA+TGG | + | chr5.1:73111823-73111842 | None:intergenic | 20.0% |
| !! | ATCAACATAAAACATAAATG+AGG | + | chr5.1:73109494-73109513 | None:intergenic | 20.0% |
| !! | CAACAGATAAATAAAAAATC+AGG | + | chr5.1:73110263-73110282 | None:intergenic | 20.0% |
| !! | CTTAACAAGGTTAAATAATT+TGG | - | chr5.1:73110185-73110204 | MS.gene017115:intron | 20.0% |
| !! | GAAATCATTTAACGATTTAA+AGG | - | chr5.1:73108676-73108695 | MS.gene017115:CDS | 20.0% |
| !! | TATAAAAACATTACATTAGC+AGG | + | chr5.1:73109540-73109559 | None:intergenic | 20.0% |
| !! | TCAACATAAAACATAAATGA+GGG | + | chr5.1:73109493-73109512 | None:intergenic | 20.0% |
| !! | TTACTTTAATTATGTAGCAT+TGG | - | chr5.1:73110478-73110497 | MS.gene017115:intron | 20.0% |
| !! | TTATTTACTCTATTGAAATC+TGG | - | chr5.1:73107292-73107311 | MS.gene017115:CDS | 20.0% |
| !! | TTGGATGTTAAACTTAAAAT+AGG | + | chr5.1:73108117-73108136 | None:intergenic | 20.0% |
| !! | TTGGTTGAAAAATTTAAAGA+AGG | - | chr5.1:73111281-73111300 | MS.gene017115:intron | 20.0% |
| !!! | AAAGTGTTGAAATAAAATTC+CGG | - | chr5.1:73111738-73111757 | MS.gene017115:intron | 20.0% |
| !!! | ATTCCATTTTCTCTAATTTT+CGG | + | chr5.1:73108728-73108747 | None:intergenic | 20.0% |
| !!! | GTGTGATTTTAACATATATT+GGG | - | chr5.1:73110056-73110075 | MS.gene017115:intron | 20.0% |
| !!! | TGTGATTTTAACATATATTG+GGG | - | chr5.1:73110057-73110076 | MS.gene017115:intron | 20.0% |
| !!! | TGTGTGATTTTAACATATAT+TGG | - | chr5.1:73110055-73110074 | MS.gene017115:intron | 20.0% |
| !!! | TTTTATGACTTTTTCGTTTT+TGG | - | chr5.1:73109408-73109427 | MS.gene017115:intron | 20.0% |
| ! | AACATAAAACATAAATGAGG+GGG | + | chr5.1:73109491-73109510 | None:intergenic | 25.0% |
| ! | AACATCCAAACAAATTTAGA+GGG | - | chr5.1:73108128-73108147 | MS.gene017115:CDS | 25.0% |
| ! | AATGTTAATTTCTTGTCAAC+AGG | + | chr5.1:73110565-73110584 | None:intergenic | 25.0% |
| ! | AGATGTTCTTATGTACTTTA+GGG | - | chr5.1:73108064-73108083 | MS.gene017115:intron | 25.0% |
| ! | ATATGCTTCATTATTAAGCA+CGG | - | chr5.1:73110336-73110355 | MS.gene017115:intron | 25.0% |
| ! | ATTAACATTTCAAGAAAGTC+AGG | - | chr5.1:73110576-73110595 | MS.gene017115:intron | 25.0% |
| ! | ATTCAAGATAAGCCTAAAAA+AGG | + | chr5.1:73110872-73110891 | None:intergenic | 25.0% |
| ! | CAAAAATAAAGAAAAGACAG+TGG | - | chr5.1:73108457-73108476 | MS.gene017115:intron | 25.0% |
| ! | CAAATACTATTTCACAATGA+AGG | + | chr5.1:73107751-73107770 | None:intergenic | 25.0% |
| ! | CAACATAAAACATAAATGAG+GGG | + | chr5.1:73109492-73109511 | None:intergenic | 25.0% |
| ! | CATAAAATAAGAAGCTTGAA+GGG | + | chr5.1:73109395-73109414 | None:intergenic | 25.0% |
| ! | CCAATTCAATAAACTACAAA+GGG | - | chr5.1:73107904-73107923 | MS.gene017115:CDS | 25.0% |
| ! | GAGAATACTAAATCCTAAAT+TGG | - | chr5.1:73108874-73108893 | MS.gene017115:CDS | 25.0% |
| ! | GTGAGCAAATTAATATTGAA+AGG | + | chr5.1:73109367-73109386 | None:intergenic | 25.0% |
| ! | GTTATATAATCCTGAAAAAG+AGG | - | chr5.1:73110009-73110028 | MS.gene017115:intron | 25.0% |
| ! | TAACATCCAAACAAATTTAG+AGG | - | chr5.1:73108127-73108146 | MS.gene017115:CDS | 25.0% |
| ! | TAGAGAATTACAAGACTTTA+AGG | + | chr5.1:73111177-73111196 | None:intergenic | 25.0% |
| ! | TAGATGTTCTTATGTACTTT+AGG | - | chr5.1:73108063-73108082 | MS.gene017115:intron | 25.0% |
| ! | TATGTAATTGGTACCAATTT+AGG | + | chr5.1:73108890-73108909 | None:intergenic | 25.0% |
| ! | TCAAATGTATTTCCATTTGA+TGG | - | chr5.1:73110111-73110130 | MS.gene017115:intron | 25.0% |
| ! | TCATAAAATAAGAAGCTTGA+AGG | + | chr5.1:73109396-73109415 | None:intergenic | 25.0% |
| ! | TCCAATTCAATAAACTACAA+AGG | - | chr5.1:73107903-73107922 | MS.gene017115:CDS | 25.0% |
| ! | TGATTATGATTTATTAGGCT+AGG | + | chr5.1:73108798-73108817 | None:intergenic | 25.0% |
| ! | TGATTTCTAATATGTGATGT+AGG | - | chr5.1:73109196-73109215 | MS.gene017115:intron | 25.0% |
| ! | TTAATTGCTCGATACTTATT+AGG | - | chr5.1:73108556-73108575 | MS.gene017115:intron | 25.0% |
| ! | TTCAAATGATTCTTCATCTT+CGG | + | chr5.1:73110944-73110963 | None:intergenic | 25.0% |
| ! | TTCGTCATATGAATAATATG+TGG | - | chr5.1:73109072-73109091 | MS.gene017115:CDS | 25.0% |
| ! | TTTAACATATATTGGGGTAA+AGG | - | chr5.1:73110063-73110082 | MS.gene017115:intron | 25.0% |
| !! | AGTAGAATTGGAATTGTTTT+TGG | - | chr5.1:73109812-73109831 | MS.gene017115:intron | 25.0% |
| !! | ATACTCTTTTGTCTTAATTC+TGG | + | chr5.1:73107102-73107121 | None:intergenic | 25.0% |
| !! | CCTTCAATACTTCATTATTT+TGG | + | chr5.1:73111490-73111509 | None:intergenic | 25.0% |
| !! | GAGTGTTGTAAATATGTAAT+TGG | + | chr5.1:73108902-73108921 | None:intergenic | 25.0% |
| !!! | CCAAAATAATGAAGTATTGA+AGG | - | chr5.1:73111487-73111506 | MS.gene017115:intron | 25.0% |
| AACCATCAGAAATCTTAACA+AGG | - | chr5.1:73110172-73110191 | MS.gene017115:intron | 30.0% | |
| AACCTTGTTAAGATTTCTGA+TGG | + | chr5.1:73110177-73110196 | None:intergenic | 30.0% | |
| AATGAAGGATTTCAGAGAAT+AGG | + | chr5.1:73107736-73107755 | None:intergenic | 30.0% | |
| AATTGATGCTATGATAGATG+AGG | - | chr5.1:73111103-73111122 | MS.gene017115:intron | 30.0% | |
| AATTGCAAGTTATTGGCAAA+CGG | + | chr5.1:73108334-73108353 | None:intergenic | 30.0% | |
| ACAAGGTTAAATAATTTGGC+TGG | - | chr5.1:73110189-73110208 | MS.gene017115:intron | 30.0% | |
| ACTTAAAATAGGTTTCTACC+TGG | + | chr5.1:73108106-73108125 | None:intergenic | 30.0% | |
| AGAAAAGGAAACTAACAATG+AGG | + | chr5.1:73107628-73107647 | None:intergenic | 30.0% | |
| AGAGCAAAACGAAAACATTA+TGG | - | chr5.1:73110963-73110982 | MS.gene017115:CDS | 30.0% | |
| ATGAAAGAGGAAAAGAAATG+CGG | - | chr5.1:73107810-73107829 | MS.gene017115:intron | 30.0% | |
| ATGACTTACAAGAAGAGAAA+GGG | - | chr5.1:73110407-73110426 | MS.gene017115:intron | 30.0% | |
| CAGTAGAAATTGCAAGTTAT+TGG | + | chr5.1:73108341-73108360 | None:intergenic | 30.0% | |
| CCCTTTGTAGTTTATTGAAT+TGG | + | chr5.1:73107907-73107926 | None:intergenic | 30.0% | |
| CGGTTACAAGGATTAAATAT+AGG | + | chr5.1:73107685-73107704 | None:intergenic | 30.0% | |
| CTATGATGACATAGTAGAAT+TGG | - | chr5.1:73109800-73109819 | MS.gene017115:intron | 30.0% | |
| CTTATATGTCACAATTGGAT+TGG | + | chr5.1:73107419-73107438 | None:intergenic | 30.0% | |
| GATGAGTACAATTTGACAAA+AGG | - | chr5.1:73107005-73107024 | MS.gene017115:CDS | 30.0% | |
| GGCATTTAAGTAAAATGATG+TGG | + | chr5.1:73111858-73111877 | None:intergenic | 30.0% | |
| GTGCTTAATAATGAAGCATA+TGG | + | chr5.1:73110337-73110356 | None:intergenic | 30.0% | |
| TAAAGTTCAATCTCTTCATC+AGG | + | chr5.1:73110222-73110241 | None:intergenic | 30.0% | |
| TAAGAATAAATGGGTAGCTT+TGG | + | chr5.1:73110848-73110867 | None:intergenic | 30.0% | |
| TATAGTACATATCCAGTTGA+TGG | - | chr5.1:73110599-73110618 | MS.gene017115:intron | 30.0% | |
| TATGACTTACAAGAAGAGAA+AGG | - | chr5.1:73110406-73110425 | MS.gene017115:intron | 30.0% | |
| TATGCTTCATTATTAAGCAC+GGG | - | chr5.1:73110337-73110356 | MS.gene017115:intron | 30.0% | |
| TATTGTTTGATCCTTCAAGA+GGG | - | chr5.1:73107960-73107979 | MS.gene017115:CDS | 30.0% | |
| TGAAATCTGGCGTATTAATA+TGG | - | chr5.1:73107305-73107324 | MS.gene017115:intron | 30.0% | |
| TGAAGAGATTGAACTTTATG+AGG | - | chr5.1:73110224-73110243 | MS.gene017115:CDS | 30.0% | |
| TGCAAGGATAATAATATGCA+GGG | + | chr5.1:73107233-73107252 | None:intergenic | 30.0% | |
| TTAATTTCCTGCACAACAAT+AGG | + | chr5.1:73110517-73110536 | None:intergenic | 30.0% | |
| TTCATAAAGTAAAAGGGGTT+TGG | - | chr5.1:73107346-73107365 | MS.gene017115:intron | 30.0% | |
| TTTGAAAATAGAGCAAGACT+CGG | - | chr5.1:73111448-73111467 | MS.gene017115:intron | 30.0% | |
| ! | AAGTCTTGTAATTCTCTACA+AGG | - | chr5.1:73111179-73111198 | MS.gene017115:intron | 30.0% |
| ! | ACAATACTAATTTCTAGGGA+AGG | + | chr5.1:73108519-73108538 | None:intergenic | 30.0% |
| ! | ATATACACATGGTTTTCGTA+TGG | - | chr5.1:73109630-73109649 | MS.gene017115:CDS | 30.0% |
| ! | ATGTATTTGCTTTGCCTTTT+CGG | - | chr5.1:73111832-73111851 | MS.gene017115:intron | 30.0% |
| ! | ATTCTCATGGATTGAAAAGA+CGG | + | chr5.1:73107705-73107724 | None:intergenic | 30.0% |
| ! | ATTGGCTTATATGTCACAAT+TGG | + | chr5.1:73107424-73107443 | None:intergenic | 30.0% |
| ! | CGGAAATGCACATAATTTTT+GGG | - | chr5.1:73107830-73107849 | MS.gene017115:intron | 30.0% |
| ! | TAAAAGCATGATGCTTTAGT+TGG | - | chr5.1:73109033-73109052 | MS.gene017115:intron | 30.0% |
| ! | TTCATTTTGAATCAAACTGC+AGG | - | chr5.1:73109755-73109774 | MS.gene017115:intron | 30.0% |
| ! | TTCCTCTTTCATTTTGTTCT+CGG | + | chr5.1:73107802-73107821 | None:intergenic | 30.0% |
| !! | TACCTGGCTTGATTTATTTT+GGG | + | chr5.1:73108090-73108109 | None:intergenic | 30.0% |
| !!! | ATTGGAATTGTTTTTGGAAG+TGG | - | chr5.1:73109818-73109837 | MS.gene017115:intron | 30.0% |
| !!! | CTTTTTCGTTTTTGGCTTTT+AGG | - | chr5.1:73109416-73109435 | MS.gene017115:intron | 30.0% |
| !!! | CTTTTTCTGTTGGTTTATTC+TGG | - | chr5.1:73108363-73108382 | MS.gene017115:intron | 30.0% |
| AAAACAGCTATAGGCTGAAT+TGG | + | chr5.1:73111879-73111898 | None:intergenic | 35.0% | |
| AAAAGGAAGGTAGTCAAAGA+TGG | + | chr5.1:73109579-73109598 | None:intergenic | 35.0% | |
| AAAGTCATGAGAAGCTCTAT+CGG | - | chr5.1:73111779-73111798 | MS.gene017115:intron | 35.0% | |
| AACATATATTGGGGTAAAGG+TGG | - | chr5.1:73110066-73110085 | MS.gene017115:intron | 35.0% | |
| AAGAAGAAATACACGAGTGA+TGG | - | chr5.1:73108973-73108992 | MS.gene017115:intron | 35.0% | |
| AATTCCTGAAGAAGTTTCTC+AGG | + | chr5.1:73111236-73111255 | None:intergenic | 35.0% | |
| ACTTTAAGTGTGGAGAAGTT+GGG | - | chr5.1:73107185-73107204 | MS.gene017115:CDS | 35.0% | |
| AGAAACTTCTTCAGGAATTG+AGG | - | chr5.1:73111237-73111256 | MS.gene017115:intron | 35.0% | |
| ATAAAGTAAAAGGGGTTTGG+TGG | - | chr5.1:73107349-73107368 | MS.gene017115:intron | 35.0% | |
| ATATGGCTTATGAACTTGCA+AGG | + | chr5.1:73110320-73110339 | None:intergenic | 35.0% | |
| ATTCCTGAAGAAGTTTCTCA+GGG | + | chr5.1:73111235-73111254 | None:intergenic | 35.0% | |
| ATTGAGGGATATTGCCTTTA+AGG | - | chr5.1:73111253-73111272 | MS.gene017115:intron | 35.0% | |
| ATTGCTCGATACTTATTAGG+TGG | - | chr5.1:73108559-73108578 | MS.gene017115:intron | 35.0% | |
| CCAACATAAATGCCATCAAA+TGG | + | chr5.1:73110126-73110145 | None:intergenic | 35.0% | |
| CCATGAATGCAGTTAGAAAA+TGG | - | chr5.1:73110664-73110683 | MS.gene017115:intron | 35.0% | |
| CGTTAAATGATTTCTGCCTT+CGG | + | chr5.1:73108670-73108689 | None:intergenic | 35.0% | |
| CTAATATGTGATGTAGGAAG+AGG | - | chr5.1:73109202-73109221 | MS.gene017115:intron | 35.0% | |
| CTGCAAGGATAATAATATGC+AGG | + | chr5.1:73107234-73107253 | None:intergenic | 35.0% | |
| CTGCCGAAAATTAGAGAAAA+TGG | - | chr5.1:73108722-73108741 | MS.gene017115:CDS | 35.0% | |
| GAAACTAACAATGAGGAAAG+TGG | + | chr5.1:73107621-73107640 | None:intergenic | 35.0% | |
| GAAACTTCTTCAGGAATTGA+GGG | - | chr5.1:73111238-73111257 | MS.gene017115:intron | 35.0% | |
| GAGAGAGAGAATAGTTGAAT+TGG | + | chr5.1:73107442-73107461 | None:intergenic | 35.0% | |
| GAGATTGAACTTTATGAGGT+TGG | - | chr5.1:73110228-73110247 | MS.gene017115:CDS | 35.0% | |
| GCAAGGATAATAATATGCAG+GGG | + | chr5.1:73107232-73107251 | None:intergenic | 35.0% | |
| GCATATGCAACATATACACA+TGG | - | chr5.1:73109619-73109638 | MS.gene017115:CDS | 35.0% | |
| GGTAACATAACTACCAAAAC+TGG | + | chr5.1:73107600-73107619 | None:intergenic | 35.0% | |
| GTATTGTTTGATCCTTCAAG+AGG | - | chr5.1:73107959-73107978 | MS.gene017115:CDS | 35.0% | |
| GTGTTGAAATAAAATTCCGG+AGG | - | chr5.1:73111741-73111760 | MS.gene017115:intron | 35.0% | |
| GTTTAGGCAGAGTTCAAATT+TGG | + | chr5.1:73108245-73108264 | None:intergenic | 35.0% | |
| TCTGTGTTTGATGGAAACAA+AGG | + | chr5.1:73110919-73110938 | None:intergenic | 35.0% | |
| TGCAAGGAACAAACTGAATA+GGG | + | chr5.1:73107033-73107052 | None:intergenic | 35.0% | |
| TGGAAAATCTGCACTGAATT+TGG | - | chr5.1:73108383-73108402 | MS.gene017115:intron | 35.0% | |
| TTCACAATGTTCATACCTCA+TGG | - | chr5.1:73107935-73107954 | MS.gene017115:CDS | 35.0% | |
| TTGAACTTGATTCCTTGTTC+AGG | - | chr5.1:73110891-73110910 | MS.gene017115:CDS | 35.0% | |
| TTGAATCTTCTGATCTCTAC+TGG | - | chr5.1:73110455-73110474 | MS.gene017115:intron | 35.0% | |
| ! | AAGACACTGCTGAACTTTTA+TGG | - | chr5.1:73108035-73108054 | MS.gene017115:intron | 35.0% |
| ! | ACACCTTTATAAAAGCGTAG+AGG | + | chr5.1:73108487-73108506 | None:intergenic | 35.0% |
| ! | ACAGACATATTGGCTGAATA+TGG | + | chr5.1:73108188-73108207 | None:intergenic | 35.0% |
| ! | ACTGCACTGAAGTTAACTTT+TGG | + | chr5.1:73111314-73111333 | None:intergenic | 35.0% |
| ! | AGACACTGCTGAACTTTTAT+GGG | - | chr5.1:73108036-73108055 | MS.gene017115:intron | 35.0% |
| ! | AGTTGAAGTACTATGCAATG+TGG | - | chr5.1:73108006-73108025 | MS.gene017115:intron | 35.0% |
| ! | ATCTTGCTTCTCAGCAATTT+TGG | + | chr5.1:73111636-73111655 | None:intergenic | 35.0% |
| ! | CCATTTGATGGCATTTATGT+TGG | - | chr5.1:73110123-73110142 | MS.gene017115:intron | 35.0% |
| ! | CCATTTTCTAACTGCATTCA+TGG | + | chr5.1:73110667-73110686 | None:intergenic | 35.0% |
| ! | CTACCTCTACGCTTTTATAA+AGG | - | chr5.1:73108481-73108500 | MS.gene017115:intron | 35.0% |
| ! | CTTTATAAAAGCGTAGAGGT+AGG | + | chr5.1:73108483-73108502 | None:intergenic | 35.0% |
| ! | GCGGAAATGCACATAATTTT+TGG | - | chr5.1:73107829-73107848 | MS.gene017115:intron | 35.0% |
| ! | GTTAGCCCTCTAAATTTGTT+TGG | + | chr5.1:73108136-73108155 | None:intergenic | 35.0% |
| ! | GTTTTCTTCAGTAGTGCAAT+GGG | + | chr5.1:73109963-73109982 | None:intergenic | 35.0% |
| ! | TGCACATATTCTAAGAACGA+AGG | + | chr5.1:73110757-73110776 | None:intergenic | 35.0% |
| ! | TGTTTTCTTCAGTAGTGCAA+TGG | + | chr5.1:73109964-73109983 | None:intergenic | 35.0% |
| ! | TTGATGGCATTTATGTTGGA+AGG | - | chr5.1:73110127-73110146 | MS.gene017115:intron | 35.0% |
| ! | TTTTGAATCAAACTGCAGGT+TGG | - | chr5.1:73109759-73109778 | MS.gene017115:intron | 35.0% |
| ! | TTTTGTGCTCTTTTACTTCC+CGG | + | chr5.1:73108442-73108461 | None:intergenic | 35.0% |
| !! | ATAGGAGTATTGCATTCTCA+TGG | + | chr5.1:73107718-73107737 | None:intergenic | 35.0% |
| !! | ATCGACAGAGTTTTATCAGA+AGG | - | chr5.1:73111140-73111159 | MS.gene017115:intron | 35.0% |
| !! | CTACCTGGCTTGATTTATTT+TGG | + | chr5.1:73108091-73108110 | None:intergenic | 35.0% |
| !! | TCGACAGAGTTTTATCAGAA+GGG | - | chr5.1:73111141-73111160 | MS.gene017115:intron | 35.0% |
| !!! | AGAGAAAGGGCATTTTCTAA+TGG | - | chr5.1:73110420-73110439 | MS.gene017115:intron | 35.0% |
| !!! | AGTTTCCTTTTCTAGTTCCT+AGG | - | chr5.1:73107635-73107654 | MS.gene017115:CDS | 35.0% |
| !!! | GTTTCCTTTTCTAGTTCCTA+GGG | - | chr5.1:73107636-73107655 | MS.gene017115:CDS | 35.0% |
| !!! | TTCTACTGCACTTTTTCTGT+TGG | - | chr5.1:73108353-73108372 | MS.gene017115:CDS | 35.0% |
| ACACTTAGTCAGCATAGACT+TGG | - | chr5.1:73111076-73111095 | MS.gene017115:intron | 40.0% | |
| ACCATGCATGTGTGTTGAAA+AGG | - | chr5.1:73107070-73107089 | MS.gene017115:CDS | 40.0% | |
| ACCTTCTCAACAACATTGTG+AGG | - | chr5.1:73111405-73111424 | MS.gene017115:intron | 40.0% | |
| ACTCGTGTATTTCTTCTTCC+AGG | + | chr5.1:73108971-73108990 | None:intergenic | 40.0% | |
| AGAAAATCCCCACTTTGTCA+TGG | + | chr5.1:73108643-73108662 | None:intergenic | 40.0% | |
| AGAAGTTTCTCAGGGAGATT+AGG | + | chr5.1:73111227-73111246 | None:intergenic | 40.0% | |
| AGAATATGTGCACAATAGCC+TGG | - | chr5.1:73110765-73110784 | MS.gene017115:intron | 40.0% | |
| AGTTAACTTCAGTGCAGTCA+AGG | - | chr5.1:73111316-73111335 | MS.gene017115:intron | 40.0% | |
| ATAATAATATGCAGGGGTCG+GGG | + | chr5.1:73107226-73107245 | None:intergenic | 40.0% | |
| ATCACCCTAGGAACTAGAAA+AGG | + | chr5.1:73107643-73107662 | None:intergenic | 40.0% | |
| ATCCTGAAAAAGAGGAGCTA+CGG | - | chr5.1:73110017-73110036 | MS.gene017115:intron | 40.0% | |
| ATGTGTGTCAAAAGCCATGA+AGG | + | chr5.1:73109305-73109324 | None:intergenic | 40.0% | |
| CAAAAAGCTACAAGGTGACA+GGG | - | chr5.1:73111610-73111629 | MS.gene017115:intron | 40.0% | |
| CACTTTAAGTGTGGAGAAGT+TGG | - | chr5.1:73107184-73107203 | MS.gene017115:CDS | 40.0% | |
| CATGTGACATTCCACCTTAA+TGG | + | chr5.1:73107389-73107408 | None:intergenic | 40.0% | |
| CCTCACCAATTAGAACAAGT+CGG | - | chr5.1:73111371-73111390 | MS.gene017115:intron | 40.0% | |
| CCTTGCAAAACAGATTGGAA+AGG | - | chr5.1:73108595-73108614 | MS.gene017115:intron | 40.0% | |
| CTCCGAGAACAAAATGAAAG+AGG | - | chr5.1:73107797-73107816 | MS.gene017115:intron | 40.0% | |
| CTGCAAGGAACAAACTGAAT+AGG | + | chr5.1:73107034-73107053 | None:intergenic | 40.0% | |
| CTTGTAGACCATGACAAAGT+GGG | - | chr5.1:73108632-73108651 | MS.gene017115:intron | 40.0% | |
| GAAACAAAGGAACCTGAACA+AGG | + | chr5.1:73110906-73110925 | None:intergenic | 40.0% | |
| GAAGACCTTGCAAAACAGAT+TGG | - | chr5.1:73108590-73108609 | MS.gene017115:intron | 40.0% | |
| GATAATAATATGCAGGGGTC+GGG | + | chr5.1:73107227-73107246 | None:intergenic | 40.0% | |
| GGATAATAATATGCAGGGGT+CGG | + | chr5.1:73107228-73107247 | None:intergenic | 40.0% | |
| GGATCAAACAATACACCATG+AGG | + | chr5.1:73107953-73107972 | None:intergenic | 40.0% | |
| GGATTGAAAAGACGGTTACA+AGG | + | chr5.1:73107697-73107716 | None:intergenic | 40.0% | |
| GTAAAATGATGTGGCCGAAA+AGG | + | chr5.1:73111849-73111868 | None:intergenic | 40.0% | |
| GTGACATAATGTCGTGACAT+TGG | + | chr5.1:73107566-73107585 | None:intergenic | 40.0% | |
| GTTCGTTTGTAACAACTGCA+AGG | + | chr5.1:73107049-73107068 | None:intergenic | 40.0% | |
| TAGACTTAGTGACCATCAAC+TGG | + | chr5.1:73110614-73110633 | None:intergenic | 40.0% | |
| TATTGCAAGCTGGGAATGAT+TGG | + | chr5.1:73108947-73108966 | None:intergenic | 40.0% | |
| TCAAAAAGCTACAAGGTGAC+AGG | - | chr5.1:73111609-73111628 | MS.gene017115:intron | 40.0% | |
| TCCTCACAATGTTGTTGAGA+AGG | + | chr5.1:73111409-73111428 | None:intergenic | 40.0% | |
| TCGGTCAAGAACAGACATAT+TGG | + | chr5.1:73108198-73108217 | None:intergenic | 40.0% | |
| TCTGCACTGAATTTGGACAA+CGG | - | chr5.1:73108390-73108409 | MS.gene017115:intron | 40.0% | |
| TCTTCGGATTCTGTGTTTGA+TGG | + | chr5.1:73110928-73110947 | None:intergenic | 40.0% | |
| TCTTGTAGACCATGACAAAG+TGG | - | chr5.1:73108631-73108650 | MS.gene017115:intron | 40.0% | |
| TTCAACCAACTCCTCCTTAA+AGG | + | chr5.1:73111270-73111289 | None:intergenic | 40.0% | |
| TTCACAAGATACCCTCTTGA+AGG | + | chr5.1:73107974-73107993 | None:intergenic | 40.0% | |
| TTGTAGACCATGACAAAGTG+GGG | - | chr5.1:73108633-73108652 | MS.gene017115:intron | 40.0% | |
| ! | AATACACGAGTGATGGAAGT+TGG | - | chr5.1:73108980-73108999 | MS.gene017115:intron | 40.0% |
| ! | ACACAAGTGCAATCCAGTTT+TGG | - | chr5.1:73107584-73107603 | MS.gene017115:CDS | 40.0% |
| ! | ACTTGATTTGATCATCAGCG+AGG | + | chr5.1:73111715-73111734 | None:intergenic | 40.0% |
| ! | AGTCTATGCTGACTAAGTGT+TGG | + | chr5.1:73111076-73111095 | None:intergenic | 40.0% |
| ! | ATACACGAGTGATGGAAGTT+GGG | - | chr5.1:73108981-73109000 | MS.gene017115:intron | 40.0% |
| ! | ATGGCTTTTGACACACATTG+AGG | - | chr5.1:73109307-73109326 | MS.gene017115:intron | 40.0% |
| ! | CCTTTCCAATCTGTTTTGCA+AGG | + | chr5.1:73108598-73108617 | None:intergenic | 40.0% |
| ! | CGACTTGTTCTAATTGGTGA+GGG | + | chr5.1:73111373-73111392 | None:intergenic | 40.0% |
| ! | GACTTGTTCTAATTGGTGAG+GGG | + | chr5.1:73111372-73111391 | None:intergenic | 40.0% |
| ! | GAGAGTTGAGTTGTGTTTGT+TGG | + | chr5.1:73111556-73111575 | None:intergenic | 40.0% |
| ! | TATTGCCTTTAAGGAGGAGT+TGG | - | chr5.1:73111262-73111281 | MS.gene017115:intron | 40.0% |
| ! | TCCTTTTCAACACACATGCA+TGG | + | chr5.1:73107074-73107093 | None:intergenic | 40.0% |
| !! | AATTCCAGCGCTTTTGGTTA+TGG | - | chr5.1:73109252-73109271 | MS.gene017115:intron | 40.0% |
| !! | ACCTTGTAGCTTTTTGAGCT+TGG | + | chr5.1:73111606-73111625 | None:intergenic | 40.0% |
| !! | GGTTTTCGTATGGAGTGTTT+TGG | - | chr5.1:73109640-73109659 | MS.gene017115:CDS | 40.0% |
| !! | TGACTAAGTGTTGGATTTGC+TGG | + | chr5.1:73111067-73111086 | None:intergenic | 40.0% |
| !!! | TGGGCATAGCAGTGTTATTT+TGG | - | chr5.1:73107849-73107868 | MS.gene017115:intron | 40.0% |
| !!! | TGTTTTTGGAAGTGGAGCAT+GGG | - | chr5.1:73109826-73109845 | MS.gene017115:intron | 40.0% |
| !!! | TTGTTTTTGGAAGTGGAGCA+TGG | - | chr5.1:73109825-73109844 | MS.gene017115:intron | 40.0% |
| AAGTTATTGGCAAACGGAGC+AGG | + | chr5.1:73108328-73108347 | None:intergenic | 45.0% | |
| AATCGTGCCTATTGTTGTGC+AGG | - | chr5.1:73110507-73110526 | MS.gene017115:intron | 45.0% | |
| ACACCACTTGTGCACCATTA+AGG | - | chr5.1:73107372-73107391 | MS.gene017115:intron | 45.0% | |
| ACAGGCTCACACATGACATT+TGG | + | chr5.1:73110547-73110566 | None:intergenic | 45.0% | |
| AGAAGCTCTATCGGAACTTC+AGG | - | chr5.1:73111788-73111807 | MS.gene017115:intron | 45.0% | |
| AGGCTCTTTGTGAACTGTAC+TGG | - | chr5.1:73110147-73110166 | MS.gene017115:intron | 45.0% | |
| AGTTATTGGCAAACGGAGCA+GGG | + | chr5.1:73108327-73108346 | None:intergenic | 45.0% | |
| ATCATACCTGTCGACCTTCA+TGG | - | chr5.1:73109288-73109307 | MS.gene017115:intron | 45.0% | |
| ATTCCCAGCTTGCAATATCC+TGG | - | chr5.1:73108950-73108969 | MS.gene017115:intron | 45.0% | |
| CTCTACAAGGAGAAGAAGTC+CGG | - | chr5.1:73111192-73111211 | MS.gene017115:intron | 45.0% | |
| CTGCACTGAATTTGGACAAC+GGG | - | chr5.1:73108391-73108410 | MS.gene017115:intron | 45.0% | |
| CTTCCAGGATATTGCAAGCT+GGG | + | chr5.1:73108956-73108975 | None:intergenic | 45.0% | |
| GAAGCTCTATCGGAACTTCA+GGG | - | chr5.1:73111789-73111808 | MS.gene017115:intron | 45.0% | |
| GCCAAGCTCAAAAAGCTACA+AGG | - | chr5.1:73111602-73111621 | MS.gene017115:intron | 45.0% | |
| GCCAATTCAATTGTGACACG+TGG | + | chr5.1:73107544-73107563 | None:intergenic | 45.0% | |
| GCCACGTGTCACAATTGAAT+TGG | - | chr5.1:73107540-73107559 | MS.gene017115:CDS | 45.0% | |
| GCTGGTATCTTCAACATGAG+TGG | + | chr5.1:73111049-73111068 | None:intergenic | 45.0% | |
| GGACAAACGCACTTTAAGTG+TGG | - | chr5.1:73107175-73107194 | MS.gene017115:CDS | 45.0% | |
| GGAGATTAGGATCCAGTTTC+CGG | + | chr5.1:73111214-73111233 | None:intergenic | 45.0% | |
| GGCCCAAAATAAATCAAGCC+AGG | - | chr5.1:73108085-73108104 | MS.gene017115:intron | 45.0% | |
| GGTGGAATGTCACATGACAT+TGG | - | chr5.1:73107393-73107412 | MS.gene017115:intron | 45.0% | |
| GTCTGCGAAAGAAGTCTTTG+AGG | + | chr5.1:73111534-73111553 | None:intergenic | 45.0% | |
| TATTGGGGTAAAGGTGGACA+AGG | - | chr5.1:73110072-73110091 | MS.gene017115:intron | 45.0% | |
| TCCAATTCAGTTTGAGCCTC+CGG | + | chr5.1:73111760-73111779 | None:intergenic | 45.0% | |
| TCTCCCTGAGAAACTTCTTC+AGG | - | chr5.1:73111229-73111248 | MS.gene017115:intron | 45.0% | |
| TCTTCCAGGATATTGCAAGC+TGG | + | chr5.1:73108957-73108976 | None:intergenic | 45.0% | |
| TGAAGCTCAGCAGTCAAAAG+TGG | - | chr5.1:73111014-73111033 | MS.gene017115:intron | 45.0% | |
| TTTGGACAACGGGATTATGC+AGG | - | chr5.1:73108401-73108420 | MS.gene017115:intron | 45.0% | |
| ! | CAGTTCAATTCCAGCGCTTT+TGG | - | chr5.1:73109246-73109265 | MS.gene017115:intron | 45.0% |
| ! | CCGACTTGTTCTAATTGGTG+AGG | + | chr5.1:73111374-73111393 | None:intergenic | 45.0% |
| ! | GAGGGATATTGCCTTTAAGG+AGG | - | chr5.1:73111256-73111275 | MS.gene017115:intron | 45.0% |
| ! | TACCGTAGCTCCTCTTTTTC+AGG | + | chr5.1:73110022-73110041 | None:intergenic | 45.0% |
| ! | TCTAGTTCCTAGGGTGATAG+TGG | - | chr5.1:73107645-73107664 | MS.gene017115:CDS | 45.0% |
| ! | TGGGGATTTTCTATGTCCGA+AGG | - | chr5.1:73108651-73108670 | MS.gene017115:intron | 45.0% |
| ! | TTTGCCATAACCAAAAGCGC+TGG | + | chr5.1:73109259-73109278 | None:intergenic | 45.0% |
| ! | TTTTTGCTCAAGCAGCCTAC+TGG | - | chr5.1:73107150-73107169 | MS.gene017115:CDS | 45.0% |
| !! | CAAAAGCGCTGGAATTGAAC+TGG | + | chr5.1:73109248-73109267 | None:intergenic | 45.0% |
| !! | CAGCACCGACTTGTTCTAAT+TGG | + | chr5.1:73111379-73111398 | None:intergenic | 45.0% |
| ACAACGGGATTATGCAGGAG+AGG | - | chr5.1:73108406-73108425 | MS.gene017115:intron | 50.0% | |
| ACTCCGCTCAATCAAGTGAC+TGG | - | chr5.1:73108918-73108937 | MS.gene017115:intron | 50.0% | |
| AGGAGAAGAAGTCCGGAAAC+TGG | - | chr5.1:73111199-73111218 | MS.gene017115:intron | 50.0% | |
| AGGAGAGGTTGAGAAAGACC+GGG | - | chr5.1:73108421-73108440 | MS.gene017115:intron | 50.0% | |
| CAAAAGCCATGAAGGTCGAC+AGG | + | chr5.1:73109297-73109316 | None:intergenic | 50.0% | |
| CACCCAGTCACTTGATTGAG+CGG | + | chr5.1:73108924-73108943 | None:intergenic | 50.0% | |
| CAGGAGAGGTTGAGAAAGAC+CGG | - | chr5.1:73108420-73108439 | MS.gene017115:intron | 50.0% | |
| CCACCTTAATGGTGCACAAG+TGG | + | chr5.1:73107378-73107397 | None:intergenic | 50.0% | |
| CCACTTGTGCACCATTAAGG+TGG | - | chr5.1:73107375-73107394 | MS.gene017115:intron | 50.0% | |
| CTCCGCTCAATCAAGTGACT+GGG | - | chr5.1:73108919-73108938 | MS.gene017115:intron | 50.0% | |
| TCCGGAGGCTCAAACTGAAT+TGG | - | chr5.1:73111756-73111775 | MS.gene017115:intron | 50.0% | |
| TCGTGCAAGCACAACTCAGT+TGG | + | chr5.1:73107260-73107279 | None:intergenic | 50.0% | |
| ! | GAAGAGGTTGCTGTTGCGTT+TGG | - | chr5.1:73109218-73109237 | MS.gene017115:intron | 50.0% |
| ! | TCTAAGAACGAAGGCACGTC+AGG | + | chr5.1:73110748-73110767 | None:intergenic | 50.0% |
| !! | CAACTCAGTTGGTAGCTGCA+AGG | + | chr5.1:73107249-73107268 | None:intergenic | 50.0% |
| AGTGCGTTTGTCCAGCCAGT+AGG | + | chr5.1:73107168-73107187 | None:intergenic | 55.0% | |
| CTCTCAGCCACTATCACCCT+AGG | + | chr5.1:73107655-73107674 | None:intergenic | 55.0% | |
| GTGGAGAAGTTGGGAATCCG+AGG | - | chr5.1:73107194-73107213 | MS.gene017115:CDS | 55.0% | |
| TGGGGTAAAGGTGGACAAGG+TGG | - | chr5.1:73110075-73110094 | MS.gene017115:intron | 55.0% | |
| TTTGGAAGTGGAGCATGGGC+TGG | - | chr5.1:73109830-73109849 | MS.gene017115:intron | 55.0% | |
| ! | ACGAAGGCACGTCAGGATAG+CGG | + | chr5.1:73110741-73110760 | None:intergenic | 55.0% |
| !! | CTAGGGTGATAGTGGCTGAG+AGG | - | chr5.1:73107653-73107672 | MS.gene017115:CDS | 55.0% |
| TGCTCAAGCAGCCTACTGGC+TGG | - | chr5.1:73107154-73107173 | MS.gene017115:CDS | 60.0% | |
| AGGGGTCGGGGTTCGAACCT+CGG | + | chr5.1:73107214-73107233 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 73107002 | 73111904 | 73107002 | ID=MS.gene017115 |
| chr5.1 | mRNA | 73107002 | 73111904 | 73107002 | ID=MS.gene017115.t1;Parent=MS.gene017115 |
| chr5.1 | exon | 73111880 | 73111904 | 73111880 | ID=MS.gene017115.t1.exon1;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73111880 | 73111904 | 73111880 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| chr5.1 | exon | 73110849 | 73111012 | 73110849 | ID=MS.gene017115.t1.exon2;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73110849 | 73111012 | 73110849 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| chr5.1 | exon | 73110209 | 73110328 | 73110209 | ID=MS.gene017115.t1.exon3;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73110209 | 73110328 | 73110209 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| chr5.1 | exon | 73109566 | 73109688 | 73109566 | ID=MS.gene017115.t1.exon4;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73109566 | 73109688 | 73109566 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| chr5.1 | exon | 73109055 | 73109129 | 73109055 | ID=MS.gene017115.t1.exon5;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73109055 | 73109129 | 73109055 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| chr5.1 | exon | 73108868 | 73108896 | 73108868 | ID=MS.gene017115.t1.exon6;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73108868 | 73108896 | 73108868 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| chr5.1 | exon | 73108661 | 73108757 | 73108661 | ID=MS.gene017115.t1.exon7;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73108661 | 73108757 | 73108661 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| chr5.1 | exon | 73108309 | 73108377 | 73108309 | ID=MS.gene017115.t1.exon8;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73108309 | 73108377 | 73108309 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| chr5.1 | exon | 73108120 | 73108230 | 73108120 | ID=MS.gene017115.t1.exon9;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73108120 | 73108230 | 73108120 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| chr5.1 | exon | 73107874 | 73107993 | 73107874 | ID=MS.gene017115.t1.exon10;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73107874 | 73107993 | 73107874 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| chr5.1 | exon | 73107398 | 73107781 | 73107398 | ID=MS.gene017115.t1.exon11;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73107398 | 73107781 | 73107398 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| chr5.1 | exon | 73107002 | 73107319 | 73107002 | ID=MS.gene017115.t1.exon12;Parent=MS.gene017115.t1 |
| chr5.1 | CDS | 73107002 | 73107319 | 73107002 | ID=cds.MS.gene017115.t1;Parent=MS.gene017115.t1 |
| Gene Sequence |
| Protein sequence |
