AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038300.t1 MTR_5g091180 92.264 698 35 2 14 697 10 702 0.0 1290
MS.gene038300.t1 MTR_5g091450 59.696 789 227 8 22 724 9 792 0.0 856
MS.gene038300.t1 MTR_5g091430 62.976 551 170 5 206 724 2 550 0.0 646
MS.gene038300.t1 MTR_5g091410 53.276 580 198 8 184 724 4 549 3.69e-176 515
MS.gene038300.t1 MTR_5g091550 53.361 476 171 7 46 482 15 478 3.18e-152 451
MS.gene038300.t1 MTR_5g091550 52.807 481 171 8 46 482 15 483 1.04e-149 445
MS.gene038300.t1 MTR_5g091530 58.270 393 143 4 90 470 1 384 6.67e-141 419
MS.gene038300.t1 MTR_5g086700 61.644 292 84 2 173 438 533 822 1.19e-93 315
MS.gene038300.t1 MTR_5g086700 55.063 158 68 2 17 174 30 184 2.37e-46 178
MS.gene038300.t1 MTR_5g086700 61.644 292 84 2 173 438 533 822 1.43e-93 315
MS.gene038300.t1 MTR_5g086700 55.063 158 68 2 17 174 30 184 2.54e-46 178
MS.gene038300.t1 MTR_3g079840 59.247 292 90 3 177 441 532 821 5.80e-88 299
MS.gene038300.t1 MTR_3g079840 58.333 144 59 1 31 174 37 179 7.53e-47 180
MS.gene038300.t1 MTR_3g079840 59.247 292 90 3 177 441 533 822 5.98e-88 299
MS.gene038300.t1 MTR_3g079840 58.333 144 59 1 31 174 38 180 7.40e-47 180
MS.gene038300.t1 MTR_1g041240 42.677 396 187 7 84 441 429 822 7.11e-70 248
MS.gene038300.t1 MTR_1g041240 51.316 152 66 3 29 174 30 179 2.28e-40 160
MS.gene038300.t1 MTR_1g041240 42.677 396 187 7 84 441 431 824 7.40e-70 248
MS.gene038300.t1 MTR_1g041240 51.316 152 66 3 29 174 32 181 2.29e-40 160
MS.gene038300.t1 MTR_1g041240 42.677 396 187 7 84 441 430 823 8.18e-70 248
MS.gene038300.t1 MTR_1g041240 51.656 151 66 3 29 174 32 180 1.81e-40 160
MS.gene038300.t1 MTR_1g042160 35.766 137 85 2 50 183 13 149 2.04e-23 102
MS.gene038300.t1 MTR_1g073790 33.333 186 105 6 4 174 2 183 6.34e-22 102
MS.gene038300.t1 MTR_1g044450 33.523 176 99 6 13 174 15 186 5.78e-21 99.0
MS.gene038300.t1 MTR_1g073800 35.714 126 78 3 50 174 49 172 2.70e-20 94.7
MS.gene038300.t1 MTR_7g107200 33.594 128 81 3 50 174 13 139 1.24e-16 82.8
MS.gene038300.t1 MTR_3g106700 31.746 189 108 6 2 174 357 540 1.66e-16 84.7
MS.gene038300.t1 MTR_3g106700 27.273 121 85 2 53 170 71 191 5.33e-11 67.0
MS.gene038300.t1 MTR_8g006190 32.174 115 68 3 68 174 10 122 2.31e-15 79.7
MS.gene038300.t1 MTR_8g011730 30.189 159 97 5 47 199 8 158 3.20e-15 78.2
MS.gene038300.t1 MTR_4g123750 31.655 139 86 4 45 174 14 152 3.45e-15 77.4
MS.gene038300.t1 MTR_4g123750 31.618 136 86 5 44 175 170 302 3.71e-11 65.5
MS.gene038300.t1 MTR_7g107160 31.618 136 80 4 51 175 131 264 7.44e-15 78.2
MS.gene038300.t1 MTR_5g091460 76.190 42 10 0 206 247 2 43 5.66e-13 64.3
MS.gene038300.t1 MTR_8g006190 31.068 103 61 3 80 174 14 114 4.10e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038300.t1 AT5G06600 49.141 291 120 4 177 442 533 820 9.88e-71 249
MS.gene038300.t1 AT5G06600 56.849 146 61 2 31 175 36 180 6.28e-46 177
MS.gene038300.t1 AT3G11910 48.252 286 123 3 177 438 530 814 1.55e-70 250
MS.gene038300.t1 AT3G11910 52.597 154 65 2 29 175 26 178 2.66e-44 172
MS.gene038300.t1 AT3G11910 48.252 286 123 3 177 438 530 814 1.55e-70 250
MS.gene038300.t1 AT3G11910 52.597 154 65 2 29 175 26 178 2.66e-44 172
MS.gene038300.t1 AT3G11910 48.252 286 123 3 177 438 531 815 1.56e-70 250
MS.gene038300.t1 AT3G11910 52.597 154 65 2 29 175 27 179 2.59e-44 172
MS.gene038300.t1 AT3G11910 48.252 286 123 3 177 438 531 815 1.56e-70 250
MS.gene038300.t1 AT3G11910 52.597 154 65 2 29 175 27 179 2.59e-44 172
MS.gene038300.t1 AT5G06600 49.141 291 120 4 177 442 532 819 2.89e-70 249
MS.gene038300.t1 AT5G06600 56.849 146 61 2 31 175 35 179 6.92e-46 177
MS.gene038300.t1 AT5G06600 49.141 291 120 4 177 442 533 820 3.05e-70 249
MS.gene038300.t1 AT5G06600 56.849 146 61 2 31 175 36 180 7.18e-46 177
MS.gene038300.t1 AT3G58250 44.531 128 68 2 50 174 10 137 1.70e-24 105
MS.gene038300.t1 AT3G58210 35.484 155 97 2 50 201 8 162 1.00e-22 100
MS.gene038300.t1 AT3G58270 38.356 146 87 2 50 193 8 152 3.56e-22 99.0
MS.gene038300.t1 AT3G58270 38.356 146 87 2 50 193 8 152 3.56e-22 99.0
MS.gene038300.t1 AT3G58270 38.356 146 87 2 50 193 8 152 3.56e-22 99.0
MS.gene038300.t1 AT3G58350 36.232 138 84 2 50 183 8 145 3.69e-22 98.2
MS.gene038300.t1 AT3G58350 36.232 138 84 2 50 183 8 145 3.69e-22 98.2
MS.gene038300.t1 AT5G52330 36.076 158 91 5 36 187 4 157 1.20e-21 98.6
MS.gene038300.t1 AT5G52330 36.076 158 91 5 36 187 4 157 1.20e-21 98.6
MS.gene038300.t1 AT5G52330 36.076 158 91 5 36 187 4 157 1.20e-21 98.6
MS.gene038300.t1 AT3G58370 39.370 127 75 1 50 174 9 135 2.37e-21 95.9
MS.gene038300.t1 AT2G05410 37.931 145 86 3 51 192 9 152 2.53e-21 95.9
MS.gene038300.t1 AT5G43560 37.888 161 81 5 31 176 39 195 3.48e-21 99.8
MS.gene038300.t1 AT5G43560 37.888 161 81 5 31 176 39 195 3.48e-21 99.8
MS.gene038300.t1 AT3G58260 38.583 127 75 2 51 174 9 135 5.31e-21 95.1
MS.gene038300.t1 AT3G58360 36.957 138 84 2 50 185 8 144 7.44e-21 94.4
MS.gene038300.t1 AT1G04300 37.302 126 74 3 50 174 69 190 2.18e-19 94.0
MS.gene038300.t1 AT3G58340 29.464 224 138 6 50 268 8 216 3.34e-19 89.7
MS.gene038300.t1 AT3G58340 36.800 125 78 1 50 174 8 131 4.00e-19 89.4
MS.gene038300.t1 AT3G27040 33.088 136 89 1 50 183 9 144 1.13e-18 87.0
MS.gene038300.t1 AT3G58410 33.600 125 79 2 50 174 8 128 1.65e-18 87.8
MS.gene038300.t1 AT2G05420 35.099 151 88 3 43 184 2 151 1.79e-18 87.0
MS.gene038300.t1 AT3G44790 34.507 142 87 2 50 189 5 142 4.95e-18 86.3
MS.gene038300.t1 AT2G01790 33.094 139 89 2 53 187 11 149 6.30e-18 85.1
MS.gene038300.t1 AT1G04300 35.821 134 73 5 50 174 69 198 1.73e-17 87.8
MS.gene038300.t1 AT3G58290 35.461 141 78 4 45 174 6 144 9.90e-17 81.6
MS.gene038300.t1 AT1G04300 38.889 108 61 3 68 174 68 171 1.34e-16 85.1
MS.gene038300.t1 AT1G31390 35.294 119 75 1 50 166 8 126 1.48e-16 80.9
MS.gene038300.t1 AT2G42460 38.060 134 78 3 51 182 10 140 4.34e-16 80.1
MS.gene038300.t1 AT3G58400 32.479 117 76 2 71 185 24 139 1.48e-15 78.6
MS.gene038300.t1 AT3G58220 35.000 140 84 4 43 176 2 140 2.91e-15 77.8
MS.gene038300.t1 AT3G58410 32.143 140 72 3 35 174 19 135 3.08e-15 78.2
MS.gene038300.t1 AT3G58220 35.000 140 84 4 43 176 2 140 3.57e-15 78.2
MS.gene038300.t1 AT3G58220 35.000 140 84 4 43 176 2 140 3.66e-15 76.6
MS.gene038300.t1 AT3G44800 27.439 164 117 1 50 211 5 168 4.49e-15 77.8
MS.gene038300.t1 AT3G58220 35.000 140 84 4 43 176 2 140 5.58e-15 78.6
MS.gene038300.t1 AT3G58220 35.000 140 84 4 43 176 2 140 7.52e-15 77.0
MS.gene038300.t1 AT2G25320 35.556 135 76 4 50 174 405 538 8.27e-15 79.3
MS.gene038300.t1 AT2G25320 26.984 126 88 3 53 174 76 201 3.23e-11 67.8
MS.gene038300.t1 AT2G25320 35.556 135 76 4 50 174 404 537 8.41e-15 79.3
MS.gene038300.t1 AT2G25320 26.984 126 88 3 53 174 75 200 3.26e-11 67.8
MS.gene038300.t1 AT3G58200 31.579 114 78 0 50 163 8 121 8.69e-15 76.6
MS.gene038300.t1 AT2G25320 35.556 135 76 4 50 174 405 538 2.10e-14 78.2
MS.gene038300.t1 AT2G25320 26.984 126 88 3 53 174 76 201 5.40e-11 67.0
MS.gene038300.t1 AT1G31400 30.714 140 90 3 50 185 8 144 3.76e-14 73.9
MS.gene038300.t1 AT4G09780 34.091 176 104 7 44 210 208 380 4.13e-14 75.5
MS.gene038300.t1 AT3G17380 26.354 277 177 9 45 298 16 288 7.31e-14 73.6
MS.gene038300.t1 AT2G32870 31.159 138 85 5 46 175 273 408 3.32e-13 72.8
MS.gene038300.t1 AT3G58240 30.534 131 90 1 45 175 3 132 1.10e-12 70.1
MS.gene038300.t1 AT2G32880 31.111 135 78 5 50 173 178 308 2.85e-12 68.9
MS.gene038300.t1 AT2G05410 35.652 115 70 3 81 192 1 114 4.64e-12 67.4
MS.gene038300.t1 AT3G20370 33.846 130 80 3 50 174 240 368 6.17e-12 68.6
MS.gene038300.t1 AT3G20370 33.846 130 80 3 50 174 218 346 8.57e-12 67.8
MS.gene038300.t1 AT4G09780 32.258 186 105 7 44 210 208 391 9.98e-12 68.2
MS.gene038300.t1 AT4G09770 33.803 142 87 5 44 181 154 292 1.20e-11 66.6
MS.gene038300.t1 AT4G09770 33.803 142 87 5 44 181 154 292 1.20e-11 66.6
MS.gene038300.t1 AT4G09770 33.803 142 87 5 44 181 180 318 1.33e-11 67.0
MS.gene038300.t1 AT2G25330 35.556 135 77 2 50 174 359 493 1.52e-11 68.2
MS.gene038300.t1 AT3G20360 31.618 136 83 6 46 174 220 352 8.72e-11 64.7

Find 137 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCTCCATGTGAATTTAAA+TGG 0.161214 5.4:-71891298 None:intergenic
TCCAATTCAGATTGAGTTTC+CGG 0.182768 5.4:-71896862 None:intergenic
TTTAGCAAGGTTAAATAAAT+TGG 0.183528 5.4:+71894939 MS.gene038300:CDS
AGCAACTTCTTCAGGAATTA+AGG 0.184830 5.4:+71896362 MS.gene038300:CDS
ATCTTGAATCTCAGCAATTT+TGG 0.186515 5.4:-71896737 None:intergenic
GACCATTTGTCCATGTATTT+TGG 0.203338 5.4:+71891623 MS.gene038300:CDS
ATCTTGGTTAGTGCTCTTCT+TGG 0.229873 5.4:-71896596 None:intergenic
CGGCTGGATTCCTGCGCTTT+TGG 0.236440 5.4:+71893838 MS.gene038300:CDS
ATCTTTAAATGTCGTATTCT+TGG 0.238172 5.4:-71893441 None:intergenic
CAGCACCGACTTGTTCTAAT+TGG 0.250718 5.4:-71896501 None:intergenic
TTGAAGCTCAACAGTCAAAA+AGG 0.268817 5.4:+71896131 MS.gene038300:CDS
GCTTCCTCTGTTTGTCTCAT+TGG 0.273188 5.4:-71893903 None:intergenic
TCCATCGCATTGTCCCCTTC+TGG 0.277910 5.4:-71891602 None:intergenic
ACCAAATACATAAATCAAAA+TGG 0.280208 5.4:-71896925 None:intergenic
CAATCGTTTCTTCGACTATA+AGG 0.280493 5.4:-71896096 None:intergenic
AGAAGAAAGACAACAGATTC+AGG 0.310402 5.4:+71890663 MS.gene038300:CDS
CCTTCAATGCTTCATTATCT+TGG 0.313744 5.4:-71896612 None:intergenic
TCTAAAGATTCTTCATCTTT+CGG 0.315685 5.4:-71896058 None:intergenic
ATTGCGTTGAAGTTAACTTT+AGG 0.328934 5.4:-71896436 None:intergenic
CGAAAACTGCTCACTTTGTC+AGG 0.338038 5.4:-71893413 None:intergenic
TCTCCCTGAGCAACTTCTTC+AGG 0.349104 5.4:+71896354 MS.gene038300:CDS
CACATTCTTGTTCATTGAAT+CGG 0.349748 5.4:-71892650 None:intergenic
GTTCAGATGTATTTGATGTT+GGG 0.358573 5.4:+71891356 MS.gene038300:CDS
TCCGGAAACTCAATCTGAAT+TGG 0.358844 5.4:+71896861 MS.gene038300:CDS
AGTGTTAATTTCTTGTCAAC+AGG 0.364167 5.4:-71895668 None:intergenic
AAGAAGTTGCTCAGGGAGAT+TGG 0.365004 5.4:-71896350 None:intergenic
GAAAGATGAAGAATCTTTAG+AGG 0.365816 5.4:+71896060 MS.gene038300:CDS
ACAGGATCACATTTAACATT+TGG 0.366346 5.4:-71895650 None:intergenic
TCTTTAAATGTCGTATTCTT+GGG 0.382339 5.4:-71893440 None:intergenic
GTTTGTCTCATTGGCCGAAT+AGG 0.383399 5.4:-71893894 None:intergenic
TACGACATTTAAAGATTTCA+AGG 0.384454 5.4:+71893448 MS.gene038300:CDS
ACCATTGTGGATAGCCAGCC+TGG 0.384867 5.4:+71891262 MS.gene038300:CDS
CCAAGATAATGAAGCATTGA+AGG 0.386006 5.4:+71896612 MS.gene038300:CDS
TCTATGTCTGAGAGACAAAT+AGG 0.386039 5.4:-71896034 None:intergenic
GCAACTTCTTCAGGAATTAA+GGG 0.387841 5.4:+71896363 MS.gene038300:CDS
TCAATGAACAAGAATGTGAT+TGG 0.400524 5.4:+71892655 MS.gene038300:CDS
CCATCGCATTGTCCCCTTCT+GGG 0.405500 5.4:-71891601 None:intergenic
CAAGAGAGTTGAGTTGTGTT+TGG 0.406897 5.4:-71896681 None:intergenic
TGTTCAGATGTATTTGATGT+TGG 0.408120 5.4:+71891355 MS.gene038300:CDS
GATTTGCTGGTACCTTCATC+AGG 0.408566 5.4:-71896169 None:intergenic
TCACCTCTACACTATTATAA+AGG 0.410063 5.4:+71893220 MS.gene038300:CDS
TGAAGAGATTGAACTTTATG+AGG 0.412756 5.4:+71894978 MS.gene038300:CDS
ACCATACATATCGTCCTATT+CGG 0.420565 5.4:+71893880 MS.gene038300:CDS
CGCCAAAATACATGGACAAA+TGG 0.422835 5.4:-71891625 None:intergenic
TTCACAACATACCCTCTTGA+AGG 0.431720 5.4:-71892717 None:intergenic
AAGTGTTGAAGATCAAATTC+CGG 0.436652 5.4:+71896843 MS.gene038300:CDS
GGTGACTGGTACTGGTACCA+TGG 0.440214 5.4:-71894715 None:intergenic
TCTCTCTTGGTGACTGGTAC+TGG 0.441638 5.4:-71894723 None:intergenic
TGCACATATTTCATGTATGA+AGG 0.442835 5.4:-71895862 None:intergenic
CAATGAACAAGAATGTGATT+GGG 0.444176 5.4:+71892656 MS.gene038300:CDS
ACAGATTCAGGTGTTGTGTT+GGG 0.451887 5.4:+71890603 MS.gene038300:CDS
TTTGATCATCAACGAGGTGC+TGG 0.453918 5.4:-71896810 None:intergenic
GAGAGTTGAGTTGTGTTTGG+TGG 0.457037 5.4:-71896678 None:intergenic
AATTCCTGAAGAAGTTGCTC+AGG 0.459517 5.4:-71896358 None:intergenic
GCAAGGTTAAATAAATTGGC+TGG 0.463145 5.4:+71894943 MS.gene038300:CDS
TGCATAAATACTCCAACCGT+TGG 0.463303 5.4:-71891669 None:intergenic
TTCATGTATGAAGGCACATC+GGG 0.465238 5.4:-71895853 None:intergenic
CAGAAAATTTGCCCAACGGT+TGG 0.465986 5.4:+71891657 MS.gene038300:CDS
CTCGGAAGAATTTGATGCTA+TGG 0.467978 5.4:+71896219 MS.gene038300:CDS
AGAAGTTGCTCAGGGAGATT+GGG 0.468112 5.4:-71896349 None:intergenic
ATCTGCAACGCCAAAATACA+TGG 0.473771 5.4:-71891633 None:intergenic
GTGACTGGTACTGGTACCAT+GGG 0.475625 5.4:-71894714 None:intergenic
AATGGAGAAGGATCCTTGCC+AGG 0.489880 5.4:-71891280 None:intergenic
GCCGAATAGGACGATATGTA+TGG 0.490180 5.4:-71893881 None:intergenic
TAATATGTCATGCTCTCTCT+TGG 0.496717 5.4:-71894736 None:intergenic
TGCTAGAGAGTTTGACATAC+CGG 0.498933 5.4:+71893818 MS.gene038300:CDS
TTCAGATGTATTTGATGTTG+GGG 0.500110 5.4:+71891357 MS.gene038300:CDS
TCTCTTATGAGCTGCAAAAG+AGG 0.500572 5.4:-71890643 None:intergenic
GAAGACCTTGCACAACAGAT+TGG 0.502825 5.4:+71893362 MS.gene038300:CDS
ACAGGCTAGATGACAGATTC+AGG 0.503446 5.4:+71890591 None:intergenic
TCCTTCTATGGCAGTTATGT+TGG 0.504039 5.4:+71894877 MS.gene038300:intron
CTTCTCCATTTAAATTCACA+TGG 0.505907 5.4:+71891293 MS.gene038300:CDS
AAGGACAAGAATACTCAAAA+CGG 0.506677 5.4:+71896323 MS.gene038300:CDS
TCATGCTCTCTCTTGGTGAC+TGG 0.508189 5.4:-71894729 None:intergenic
TTGCAAAACTACAAGAAGAC+AGG 0.508255 5.4:+71896713 MS.gene038300:CDS
AGGACAAGAATACTCAAAAC+GGG 0.508495 5.4:+71896324 MS.gene038300:CDS
GAAATATGTGCACAATTGCC+AGG 0.510511 5.4:+71895873 MS.gene038300:CDS
GAGAAGGATCCTTGCCAGGC+TGG 0.516330 5.4:-71891276 None:intergenic
TACTCTTGTAGTTGAAGTTG+AGG 0.519380 5.4:+71892743 MS.gene038300:CDS
TCATCAAGAGGTATGAAGAA+TGG 0.520033 5.4:-71892684 None:intergenic
GTGTTGGGTCTGTGTTGTGT+TGG 0.520073 5.4:+71890618 MS.gene038300:CDS
AACCTTGCTAAAATTGCTGA+CGG 0.523355 5.4:-71894928 None:intergenic
GCATAAATACTCCAACCGTT+GGG 0.524822 5.4:-71891668 None:intergenic
AGAGAGTTTGACATACCGGC+TGG 0.526991 5.4:+71893822 MS.gene038300:CDS
GCTGAGGACTCTGTGACAAA+AGG 0.532529 5.4:+71891725 MS.gene038300:CDS
AGTTAACTTCAACGCAATCA+AGG 0.533918 5.4:+71896441 MS.gene038300:CDS
AAGACATCGCCGACCATGCA+AGG 0.534443 5.4:+71892787 MS.gene038300:CDS
TCCTCACAATGTTGTTGAGA+AGG 0.536532 5.4:-71896531 None:intergenic
TCTATGGCAGTTATGTTGGA+AGG 0.540150 5.4:+71894881 MS.gene038300:intron
ACCTTGCTAAAATTGCTGAC+GGG 0.548915 5.4:-71894927 None:intergenic
GACAGATTCAGGTGTTGTGT+TGG 0.550398 5.4:+71890602 MS.gene038300:CDS
CATGTGAATTTAAATGGAGA+AGG 0.550640 5.4:-71891292 None:intergenic
AATATCTACTTACCCTTGCA+TGG 0.552441 5.4:-71892800 None:intergenic
CTTTCAGAAAGCTTCTGCAA+TGG 0.553978 5.4:+71895807 MS.gene038300:CDS
CCCAGAAGGGGACAATGCGA+TGG 0.554137 5.4:+71891601 MS.gene038300:CDS
TATTTAGGATTTACACCCCA+TGG 0.555285 5.4:+71894698 MS.gene038300:intron
CCTTTCCAATCTGTTGTGCA+AGG 0.559503 5.4:-71893367 None:intergenic
GCTGGTACCTTCATCAGGAG+TGG 0.560775 5.4:-71896164 None:intergenic
TTGTGTTTGGTGGTTTGTGA+AGG 0.561186 5.4:-71896668 None:intergenic
TCTACTTACCCTTGCATGGT+CGG 0.561530 5.4:-71892796 None:intergenic
AAATCTCAACATTCTGTCCA+AGG 0.573610 5.4:+71896304 MS.gene038300:CDS
GCCTTCTCAACAACATTGTG+AGG 0.576781 5.4:+71896530 MS.gene038300:CDS
TGTGGATAGCCAGCCTGGCA+AGG 0.577515 5.4:+71891267 MS.gene038300:CDS
ATAGAGACCACTCCTGATGA+AGG 0.578728 5.4:+71896157 MS.gene038300:CDS
TTGCCCAATACCAAAAGCGC+AGG 0.579940 5.4:-71893848 None:intergenic
ATTAACACTTACAGAAAGCA+AGG 0.581070 5.4:+71895682 MS.gene038300:CDS
GAAACTCAATCTGAATTGGA+AGG 0.583632 5.4:+71896865 MS.gene038300:CDS
GCCAGGCTGGCTATCCACAA+TGG 0.586961 5.4:-71891263 None:intergenic
ACCTGAAAATGCCACCATTG+TGG 0.587722 5.4:+71891249 MS.gene038300:CDS
GATTCAGAAAATTTGCCCAA+CGG 0.602356 5.4:+71891653 MS.gene038300:CDS
GAATTATCTGATCCTTCAAG+AGG 0.602966 5.4:+71892705 MS.gene038300:CDS
AATACATAAATCAAAATGGA+GGG 0.604407 5.4:-71896921 None:intergenic
ATTCCTGAAGAAGTTGCTCA+GGG 0.607984 5.4:-71896357 None:intergenic
GGATCAGATAATTCATCAAG+AGG 0.613222 5.4:-71892696 None:intergenic
TTTCATGTATGAAGGCACAT+CGG 0.614320 5.4:-71895854 None:intergenic
CCATGAATGCAGTTGAACAA+TGG 0.615519 5.4:+71895772 MS.gene038300:intron
AAATACATAAATCAAAATGG+AGG 0.622267 5.4:-71896922 None:intergenic
AAAATTAGTCAGCATAGACT+CGG 0.622744 5.4:+71896201 MS.gene038300:CDS
TCAGATGTATTTGATGTTGG+GGG 0.629518 5.4:+71891358 MS.gene038300:CDS
CAAAAGCGCAGGAATCCAGC+CGG 0.632153 5.4:-71893837 None:intergenic
GACTTGTTCTAATTGGAGAG+AGG 0.633400 5.4:-71896494 None:intergenic
AATGAACAAGAATGTGATTG+GGG 0.637571 5.4:+71892657 MS.gene038300:CDS
TGCAAAACTACAAGAAGACA+GGG 0.640622 5.4:+71896714 MS.gene038300:CDS
GAAAACTGCTCACTTTGTCA+GGG 0.641231 5.4:-71893412 None:intergenic
ATTTGATGCTATGGTAGATG+AGG 0.641239 5.4:+71896228 MS.gene038300:CDS
ATGAAGGCACATCGGGATAG+CGG 0.641957 5.4:-71895846 None:intergenic
AGTTAATCAAATCAATGCTG+AGG 0.642012 5.4:+71891709 MS.gene038300:CDS
AGACATCGCCGACCATGCAA+GGG 0.647513 5.4:+71892788 MS.gene038300:CDS
TCTCTCCAATTAGAACAAGT+CGG 0.655912 5.4:+71896496 MS.gene038300:CDS
ACACCTTTATAATAGTGTAG+AGG 0.656703 5.4:-71893223 None:intergenic
AGGCTGGCTATCCACAATGG+TGG 0.656981 5.4:-71891260 None:intergenic
CCTTGCACAACAGATTGGAA+AGG 0.664856 5.4:+71893367 MS.gene038300:CDS
AATTATCTGATCCTTCAAGA+GGG 0.675114 5.4:+71892706 MS.gene038300:CDS
AGTTGAGGTAACACGCAATG+TGG 0.705176 5.4:+71892758 MS.gene038300:CDS
TCGGCCAATGAGACAAACAG+AGG 0.721905 5.4:+71893899 MS.gene038300:CDS
ACTTGATTTGATCATCAACG+AGG 0.741147 5.4:-71896816 None:intergenic
TGACTGGTACTGGTACCATG+GGG 0.763509 5.4:-71894713 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTCATTAAAAAAAAAATTAA+AGG - chr5.4:71894045-71894064 None:intergenic 10.0%
!!! TAATAATTAAATATTGGTTT+AGG - chr5.4:71892998-71893017 None:intergenic 10.0%
!!! TGATATACAATATAATATTT+TGG + chr5.4:71891439-71891458 MS.gene038300:intron 10.0%
!! AAAATTTACTAAAAATGGTA+TGG - chr5.4:71894274-71894293 None:intergenic 15.0%
!! AATAATAAATATCTTTGTAG+CGG + chr5.4:71890814-71890833 MS.gene038300:intron 15.0%
!! AATTTGAAGAAATAAAAAGA+AGG - chr5.4:71894192-71894211 None:intergenic 15.0%
!! ATAAAAGAAAAAACATTAGA+AGG - chr5.4:71891558-71891577 None:intergenic 15.0%
!! ATTGTTAGTATTATATATGT+TGG + chr5.4:71892207-71892226 MS.gene038300:intron 15.0%
!! TAAAAGAAAAAACATTAGAA+GGG - chr5.4:71891557-71891576 None:intergenic 15.0%
!! TATTAATTTATATACACTGT+CGG + chr5.4:71895169-71895188 MS.gene038300:intron 15.0%
!! TTAATATTTACTCATTTGTT+CGG + chr5.4:71894090-71894109 MS.gene038300:intron 15.0%
!! TTTATACTGATAACTTAATT+AGG + chr5.4:71893328-71893347 MS.gene038300:intron 15.0%
!!! ACATGTTTTTTTTTTTTTTG+AGG - chr5.4:71890898-71890917 None:intergenic 15.0%
!!! ATATACTTTGTTATTTTGTT+TGG + chr5.4:71895390-71895409 MS.gene038300:intron 15.0%
!!! CATGTTTTTTTTTTTTTTGA+GGG - chr5.4:71890897-71890916 None:intergenic 15.0%
!!! TATACTTTGTTATTTTGTTT+GGG + chr5.4:71895391-71895410 MS.gene038300:intron 15.0%
!!! TTATTTTTATGAACATTAGT+AGG + chr5.4:71891220-71891239 MS.gene038300:intron 15.0%
!!! TTTTTCTTTCTCATATTAAT+TGG + chr5.4:71894466-71894485 MS.gene038300:intron 15.0%
!!! TTTTTTTAAATTGTCAATGT+TGG + chr5.4:71892183-71892202 MS.gene038300:intron 15.0%
!! AAAAAAAAAAAAAACACGTC+TGG - chr5.4:71895056-71895075 None:intergenic 20.0%
!! AATATACACATAAAGAGTTA+TGG + chr5.4:71893535-71893554 MS.gene038300:intron 20.0%
!! ATATAAATTAATAGCGTGTT+TGG - chr5.4:71895162-71895181 None:intergenic 20.0%
!! CAAATTGTATAATGTATACA+GGG + chr5.4:71894206-71894225 MS.gene038300:intron 20.0%
!! GTAATATGATTGAGAATATA+AGG - chr5.4:71892306-71892325 None:intergenic 20.0%
!! TAAAATTTGAATGAGAAGAT+GGG - chr5.4:71892051-71892070 None:intergenic 20.0%
!! TAATATTTACTCATTTGTTC+GGG + chr5.4:71894091-71894110 MS.gene038300:intron 20.0%
!! TAGATAAATGCAAAAAACAT+TGG - chr5.4:71890849-71890868 None:intergenic 20.0%
!! TCAAATTGTATAATGTATAC+AGG + chr5.4:71894205-71894224 MS.gene038300:intron 20.0%
!! TTAAAAAATTGTTCTCTATG+AGG - chr5.4:71893619-71893638 None:intergenic 20.0%
!! TTTAGCAAGGTTAAATAAAT+TGG + chr5.4:71894939-71894958 MS.gene038300:CDS 20.0%
!!! CATTTTCACTTTTTTTTAAG+GGG - chr5.4:71892565-71892584 None:intergenic 20.0%
!!! GAAAATAATGATTTTCCTAT+CGG - chr5.4:71893589-71893608 None:intergenic 20.0%
!!! GCATTTTCACTTTTTTTTAA+GGG - chr5.4:71892566-71892585 None:intergenic 20.0%
!!! GGTTTTTTGTATGATTATTT+TGG + chr5.4:71894430-71894449 MS.gene038300:intron 20.0%
!!! TCTTTTTGAGGTTTATTTAA+AGG + chr5.4:71895901-71895920 MS.gene038300:intron 20.0%
!!! TGCATTTTCACTTTTTTTTA+AGG - chr5.4:71892567-71892586 None:intergenic 20.0%
! AAAAAAATTAAAGGTAGCCA+AGG - chr5.4:71894036-71894055 None:intergenic 25.0%
! AAAAAAGAGAATTGAAGTCA+TGG - chr5.4:71892516-71892535 None:intergenic 25.0%
! AAAATTTGAATGAGAAGATG+GGG - chr5.4:71892050-71892069 None:intergenic 25.0%
! AAACACATAGAATTAACTGT+TGG - chr5.4:71893981-71894000 None:intergenic 25.0%
! AAACATCATGAATAGATTCA+GGG - chr5.4:71891398-71891417 None:intergenic 25.0%
! AACAAACTGAATACTGAATA+GGG - chr5.4:71891753-71891772 None:intergenic 25.0%
! ACTTGAATTATCTCAAAACT+TGG - chr5.4:71891171-71891190 None:intergenic 25.0%
! AGACATTACTAGTAATCAAA+TGG - chr5.4:71890712-71890731 None:intergenic 25.0%
! AGTTAATGCAATTATTCACA+AGG - chr5.4:71893497-71893516 None:intergenic 25.0%
! AGTTTATGAGAGAAAAATGT+GGG + chr5.4:71892440-71892459 MS.gene038300:intron 25.0%
! ATACTGATAACTTAATTAGG+TGG + chr5.4:71893331-71893350 MS.gene038300:intron 25.0%
! ATAGGTAATATGTAACTCAA+AGG + chr5.4:71890957-71890976 MS.gene038300:intron 25.0%
! ATCCAAAAATATATCTGATC+AGG - chr5.4:71892128-71892147 None:intergenic 25.0%
! ATCTTTAAATGTCGTATTCT+TGG - chr5.4:71893444-71893463 None:intergenic 25.0%
! ATTCTCCATGTGAATTTAAA+TGG - chr5.4:71891301-71891320 None:intergenic 25.0%
! ATTGTCTTGAAATACTCATA+AGG - chr5.4:71893038-71893057 None:intergenic 25.0%
! CAACAGAAATTAAAAGTTAG+TGG - chr5.4:71893079-71893098 None:intergenic 25.0%
! CTTCACAATTTAAATGTTAC+CGG - chr5.4:71894614-71894633 None:intergenic 25.0%
! GAAAATCAAGAAGCTATAAA+GGG - chr5.4:71895087-71895106 None:intergenic 25.0%
! GACAAACTACGTTATTATTT+AGG + chr5.4:71894683-71894702 MS.gene038300:intron 25.0%
! GACATTACTAGTAATCAAAT+GGG - chr5.4:71890711-71890730 None:intergenic 25.0%
! GTAAAATTTGAATGAGAAGA+TGG - chr5.4:71892052-71892071 None:intergenic 25.0%
! TAAACATCATGAATAGATTC+AGG - chr5.4:71891399-71891418 None:intergenic 25.0%
! TAATATGGGTCTCAAAAAAA+GGG + chr5.4:71894236-71894255 MS.gene038300:intron 25.0%
! TACGACATTTAAAGATTTCA+AGG + chr5.4:71893448-71893467 MS.gene038300:CDS 25.0%
! TAGTTTATGAGAGAAAAATG+TGG + chr5.4:71892439-71892458 MS.gene038300:intron 25.0%
! TATGTGTATATTTGAGAAGA+TGG - chr5.4:71893527-71893546 None:intergenic 25.0%
! TCCAAAAATATATCTGATCA+GGG - chr5.4:71892127-71892146 None:intergenic 25.0%
! TCTAAAGATTCTTCATCTTT+CGG - chr5.4:71896061-71896080 None:intergenic 25.0%
! TCTTTAAATGTCGTATTCTT+GGG - chr5.4:71893443-71893462 None:intergenic 25.0%
! TGAAAATCAAGAAGCTATAA+AGG - chr5.4:71895088-71895107 None:intergenic 25.0%
! TGACATGTTGAATAAAAGAA+GGG + chr5.4:71892353-71892372 MS.gene038300:intron 25.0%
! TGATACAGACCTATTAAAAA+AGG - chr5.4:71894379-71894398 None:intergenic 25.0%
! TTGACATGTTGAATAAAAGA+AGG + chr5.4:71892352-71892371 MS.gene038300:intron 25.0%
! TTGGTTGAAAAATTGAAAGA+AGG + chr5.4:71896406-71896425 MS.gene038300:CDS 25.0%
!! AACAAACATTACTAGTTTCT+AGG - chr5.4:71893263-71893282 None:intergenic 25.0%
!! ACAAACATTACTAGTTTCTA+GGG - chr5.4:71893262-71893281 None:intergenic 25.0%
!! AGTGAAAATGCACATATTTT+TGG + chr5.4:71892575-71892594 MS.gene038300:intron 25.0%
!! ATCATTTTATAACAACGGTA+AGG - chr5.4:71891776-71891795 None:intergenic 25.0%
!! ATGTAATTATTTTCCCAGAA+GGG + chr5.4:71891588-71891607 MS.gene038300:CDS 25.0%
!! CTTTTTCTTTTGTCATCTTT+AGG + chr5.4:71895536-71895555 MS.gene038300:intron 25.0%
!! GGTAGATCATTTTATAACAA+CGG - chr5.4:71891781-71891800 None:intergenic 25.0%
!! GTGAAAATGCACATATTTTT+GGG + chr5.4:71892576-71892595 MS.gene038300:intron 25.0%
!! TAAAAGTACATGAACATGAT+TGG - chr5.4:71891099-71891118 None:intergenic 25.0%
!! TCAAATGTATTTTCCTTCTA+TGG + chr5.4:71894865-71894884 MS.gene038300:intron 25.0%
!! TGGACAAATTGTATTGTTTT+TGG + chr5.4:71894574-71894593 MS.gene038300:intron 25.0%
!! TTAATATTTGTTGGTGTACA+AGG + chr5.4:71894826-71894845 MS.gene038300:intron 25.0%
!! TTTATTCTTATCCCTTTTCT+AGG + chr5.4:71895967-71895986 MS.gene038300:intron 25.0%
!!! ATCTTTGCACCTTTTTTAAT+AGG + chr5.4:71894367-71894386 MS.gene038300:intron 25.0%
!!! ATTAGAGCTCTAAACTTATT+TGG - chr5.4:71892898-71892917 None:intergenic 25.0%
!!! ATTGGTTTAGGAAATACTTT+TGG - chr5.4:71892986-71893005 None:intergenic 25.0%
!!! GTGCTGATTTTAATATTTGT+TGG + chr5.4:71894817-71894836 MS.gene038300:intron 25.0%
!!! GTTTTTTCTTTTATCTGATC+AGG + chr5.4:71891564-71891583 MS.gene038300:intron 25.0%
!!! TACCTGACTTGATTTATTTT+GGG - chr5.4:71892842-71892861 None:intergenic 25.0%
!!! TTAAGGGATATTGCTTTTAA+AGG + chr5.4:71896379-71896398 MS.gene038300:CDS 25.0%
AAAAGAAGGTAGTCAAAGAT+AGG - chr5.4:71894178-71894197 None:intergenic 30.0%
AAAATTAGTCAGCATAGACT+CGG + chr5.4:71896201-71896220 MS.gene038300:CDS 30.0%
AAAGAAGGTAGTCAAAGATA+GGG - chr5.4:71894177-71894196 None:intergenic 30.0%
AACATCATGAATAGATTCAG+GGG - chr5.4:71891397-71891416 None:intergenic 30.0%
AACCACAAGGATTTAATATG+AGG - chr5.4:71893699-71893718 None:intergenic 30.0%
AACCTCAAAAAGAAAATACC+TGG - chr5.4:71895894-71895913 None:intergenic 30.0%
AAGGACAAGAATACTCAAAA+CGG + chr5.4:71896323-71896342 MS.gene038300:CDS 30.0%
AATACATTTGATGTCAACTC+AGG - chr5.4:71894856-71894875 None:intergenic 30.0%
AATGAACAAGAATGTGATTG+GGG + chr5.4:71892657-71892676 MS.gene038300:CDS 30.0%
AATTATCTCAAAACTTGGAG+AGG - chr5.4:71891166-71891185 None:intergenic 30.0%
AATTATCTGATCCTTCAAGA+GGG + chr5.4:71892706-71892725 MS.gene038300:CDS 30.0%
ACACCTTTATAATAGTGTAG+AGG - chr5.4:71893226-71893245 None:intergenic 30.0%
ACAGGATCACATTTAACATT+TGG - chr5.4:71895653-71895672 None:intergenic 30.0%
ACATAAAGAGTTATGGAAGT+TGG + chr5.4:71893542-71893561 MS.gene038300:intron 30.0%
AGTATTATATATGTTGGCAG+TGG + chr5.4:71892213-71892232 MS.gene038300:intron 30.0%
AGTGTTAATTTCTTGTCAAC+AGG - chr5.4:71895671-71895690 None:intergenic 30.0%
AGTTAATCAAATCAATGCTG+AGG + chr5.4:71891709-71891728 MS.gene038300:CDS 30.0%
ATAAGTCAATCTGGTAAACA+CGG + chr5.4:71890983-71891002 MS.gene038300:intron 30.0%
ATGTAGATTCTATCTATTGG+AGG + chr5.4:71891475-71891494 MS.gene038300:intron 30.0%
ATTAACACTTACAGAAAGCA+AGG + chr5.4:71895682-71895701 MS.gene038300:CDS 30.0%
ATTGCAAATAAAGTGCATCA+TGG + chr5.4:71895464-71895483 MS.gene038300:intron 30.0%
ATTGCGTTGAAGTTAACTTT+AGG - chr5.4:71896439-71896458 None:intergenic 30.0%
CAAAAATAAAGAAAACGCAG+AGG + chr5.4:71893196-71893215 MS.gene038300:CDS 30.0%
CAATGAACAAGAATGTGATT+GGG + chr5.4:71892656-71892675 MS.gene038300:CDS 30.0%
CACATTCTTGTTCATTGAAT+CGG - chr5.4:71892653-71892672 None:intergenic 30.0%
CAGATCATAGAGAAATTGAT+GGG - chr5.4:71894511-71894530 None:intergenic 30.0%
CATAAAGAGTTATGGAAGTT+GGG + chr5.4:71893543-71893562 MS.gene038300:intron 30.0%
CATGTGAATTTAAATGGAGA+AGG - chr5.4:71891295-71891314 None:intergenic 30.0%
CCAATAGATAGAATCTACAT+GGG - chr5.4:71891475-71891494 None:intergenic 30.0%
CTAATATGGGTCTCAAAAAA+AGG + chr5.4:71894235-71894254 MS.gene038300:intron 30.0%
CTTCTCCATTTAAATTCACA+TGG + chr5.4:71891293-71891312 MS.gene038300:CDS 30.0%
GAAAGATGAAGAATCTTTAG+AGG + chr5.4:71896060-71896079 MS.gene038300:CDS 30.0%
GAACAAACTGAATACTGAAT+AGG - chr5.4:71891754-71891773 None:intergenic 30.0%
GTATATGCAATAAATGCAAG+TGG + chr5.4:71894409-71894428 MS.gene038300:intron 30.0%
GTATTATATATGTTGGCAGT+GGG + chr5.4:71892214-71892233 MS.gene038300:intron 30.0%
GTTCAGATGTATTTGATGTT+GGG + chr5.4:71891356-71891375 MS.gene038300:CDS 30.0%
TAAAAGTTAGTGGCAAACAT+AGG - chr5.4:71893069-71893088 None:intergenic 30.0%
TATTATATATGTTGGCAGTG+GGG + chr5.4:71892215-71892234 MS.gene038300:intron 30.0%
TCAAAAAAAGGGTCTAAATG+TGG + chr5.4:71894247-71894266 MS.gene038300:intron 30.0%
TCAATGAACAAGAATGTGAT+TGG + chr5.4:71892655-71892674 MS.gene038300:CDS 30.0%
TCACCTCTACACTATTATAA+AGG + chr5.4:71893220-71893239 MS.gene038300:CDS 30.0%
TCAGATCATAGAGAAATTGA+TGG - chr5.4:71894512-71894531 None:intergenic 30.0%
TCATAAACTACCAAAAGTCA+TGG - chr5.4:71892429-71892448 None:intergenic 30.0%
TCCAATAGATAGAATCTACA+TGG - chr5.4:71891476-71891495 None:intergenic 30.0%
TGAAGAGATTGAACTTTATG+AGG + chr5.4:71894978-71894997 MS.gene038300:CDS 30.0%
TGCACATATTTCATGTATGA+AGG - chr5.4:71895865-71895884 None:intergenic 30.0%
TGTTCAGATGTATTTGATGT+TGG + chr5.4:71891355-71891374 MS.gene038300:CDS 30.0%
TTCAGATGTATTTGATGTTG+GGG + chr5.4:71891357-71891376 MS.gene038300:CDS 30.0%
TTCCTCATATTAAATCCTTG+TGG + chr5.4:71893694-71893713 MS.gene038300:intron 30.0%
TTGAGAATATAAGGATGACT+TGG - chr5.4:71892297-71892316 None:intergenic 30.0%
! ATCTTGAATCTCAGCAATTT+TGG - chr5.4:71896740-71896759 None:intergenic 30.0%
! CATGTAATTATTTTCCCAGA+AGG + chr5.4:71891587-71891606 MS.gene038300:CDS 30.0%
! CTGGATCTTTTAATCTCTAT+GGG + chr5.4:71895561-71895580 MS.gene038300:intron 30.0%
! GAATTGAAAGATTTTCTTGG+AGG + chr5.4:71891317-71891336 MS.gene038300:CDS 30.0%
! GACAGAATGTTGAGATTTTA+AGG - chr5.4:71896302-71896321 None:intergenic 30.0%
! GGAGAATTGAAAGATTTTCT+TGG + chr5.4:71891314-71891333 MS.gene038300:CDS 30.0%
! TAAAAGCATGATGCTTTAGT+TGG + chr5.4:71893658-71893677 MS.gene038300:intron 30.0%
! TAATAACGTAGTTTGTCAAC+AGG - chr5.4:71894680-71894699 None:intergenic 30.0%
! TCAAAAGTGTAAAAACCACA+AGG - chr5.4:71893712-71893731 None:intergenic 30.0%
! TCAAGGTATCATCATTAGTT+AGG + chr5.4:71893465-71893484 MS.gene038300:intron 30.0%
! TCCCTGATCAGATATATTTT+TGG + chr5.4:71892123-71892142 MS.gene038300:intron 30.0%
! TGAGTTCAATATTTTCTGTC+TGG - chr5.4:71896641-71896660 None:intergenic 30.0%
! TGTAATTATTTTCCCAGAAG+GGG + chr5.4:71891589-71891608 MS.gene038300:CDS 30.0%
! TTCATGTACTTTTACATTGC+TGG + chr5.4:71891105-71891124 MS.gene038300:intron 30.0%
! TTTAGGAAATACTTTTGGTC+AGG - chr5.4:71892981-71893000 None:intergenic 30.0%
! TTTTGTGCTTTTGTACTTTC+TGG - chr5.4:71893181-71893200 None:intergenic 30.0%
!! AAGTGTTGAAGATCAAATTC+CGG + chr5.4:71896843-71896862 MS.gene038300:CDS 30.0%
!! CTACCTGACTTGATTTATTT+TGG - chr5.4:71892843-71892862 None:intergenic 30.0%
!! TATTGCTTTTAAAGGAGACT+TGG + chr5.4:71896387-71896406 MS.gene038300:CDS 30.0%
!!! ATCGTTATTTTTTCCATCCT+TGG + chr5.4:71894016-71894035 MS.gene038300:intron 30.0%
!!! CCAATAATTTTTTAACCTCG+CGG + chr5.4:71891955-71891974 MS.gene038300:intron 30.0%
!!! TTCTGTTGTACTTTTTCTGT+TGG + chr5.4:71893091-71893110 MS.gene038300:intron 30.0%
AAAGAGAATTGAAGTCATGG+TGG - chr5.4:71892513-71892532 None:intergenic 35.0%
AAATATCTTTGTAGCGGTGT+CGG + chr5.4:71890820-71890839 MS.gene038300:intron 35.0%
AAATCTCAACATTCTGTCCA+AGG + chr5.4:71896304-71896323 MS.gene038300:CDS 35.0%
AAATTAAAGGTAGCCAAGGA+TGG - chr5.4:71894032-71894051 None:intergenic 35.0%
AACCTTGCTAAAATTGCTGA+CGG - chr5.4:71894931-71894950 None:intergenic 35.0%
AAGAAGGTAGTCAAAGATAG+GGG - chr5.4:71894176-71894195 None:intergenic 35.0%
AATATCTACTTACCCTTGCA+TGG - chr5.4:71892803-71892822 None:intergenic 35.0%
AATTGTGTGTATTGTTGTGC+AGG + chr5.4:71895613-71895632 MS.gene038300:intron 35.0%
ACCATACATATCGTCCTATT+CGG + chr5.4:71893880-71893899 MS.gene038300:CDS 35.0%
AGAAGAAAGACAACAGATTC+AGG + chr5.4:71890663-71890682 MS.gene038300:CDS 35.0%
AGCAACTTCTTCAGGAATTA+AGG + chr5.4:71896362-71896381 MS.gene038300:CDS 35.0%
AGCCCAAAATAAATCAAGTC+AGG + chr5.4:71892837-71892856 MS.gene038300:intron 35.0%
AGGACAAGAATACTCAAAAC+GGG + chr5.4:71896324-71896343 MS.gene038300:CDS 35.0%
AGTTAACTTCAACGCAATCA+AGG + chr5.4:71896441-71896460 MS.gene038300:CDS 35.0%
ATAAAGTGCATCATGGTCTA+TGG + chr5.4:71895471-71895490 MS.gene038300:intron 35.0%
ATACAGGGATGCATCTAATA+TGG + chr5.4:71894221-71894240 MS.gene038300:intron 35.0%
ATATTTCTTCTGCACATGCA+AGG - chr5.4:71895374-71895393 None:intergenic 35.0%
ATTTGATGCTATGGTAGATG+AGG + chr5.4:71896228-71896247 MS.gene038300:CDS 35.0%
CAATCGTTTCTTCGACTATA+AGG - chr5.4:71896099-71896118 None:intergenic 35.0%
CACAGATGATAAATACACAC+AGG - chr5.4:71891532-71891551 None:intergenic 35.0%
CATTTCAACATGCATGCATA+TGG - chr5.4:71891802-71891821 None:intergenic 35.0%
CCCATGTAGATTCTATCTAT+TGG + chr5.4:71891472-71891491 MS.gene038300:intron 35.0%
CCGCGAGGTTAAAAAATTAT+TGG - chr5.4:71891958-71891977 None:intergenic 35.0%
CCTTCAATGCTTCATTATCT+TGG - chr5.4:71896615-71896634 None:intergenic 35.0%
CGGATGAATGATTTACGATA+CGG + chr5.4:71891003-71891022 MS.gene038300:intron 35.0%
CTATTCTGTAAAATCTGCAC+TGG + chr5.4:71893115-71893134 MS.gene038300:intron 35.0%
CTCATTCTGATTCAAATTGC+AGG + chr5.4:71894550-71894569 MS.gene038300:intron 35.0%
GAAACTCAATCTGAATTGGA+AGG + chr5.4:71896865-71896884 MS.gene038300:CDS 35.0%
GAATTATCTGATCCTTCAAG+AGG + chr5.4:71892705-71892724 MS.gene038300:CDS 35.0%
GATTCAGAAAATTTGCCCAA+CGG + chr5.4:71891653-71891672 MS.gene038300:CDS 35.0%
GATTTACGATACGGTTATGT+GGG + chr5.4:71891012-71891031 MS.gene038300:intron 35.0%
GCAACTTCTTCAGGAATTAA+GGG + chr5.4:71896363-71896382 MS.gene038300:CDS 35.0%
GCAAGGTTAAATAAATTGGC+TGG + chr5.4:71894943-71894962 MS.gene038300:CDS 35.0%
GGATCAGATAATTCATCAAG+AGG - chr5.4:71892699-71892718 None:intergenic 35.0%
TAACTTAGTGAGCATCAACT+GGG - chr5.4:71895719-71895738 None:intergenic 35.0%
TAATATGTCATGCTCTCTCT+TGG - chr5.4:71894739-71894758 None:intergenic 35.0%
TACAGGGATGCATCTAATAT+GGG + chr5.4:71894222-71894241 MS.gene038300:intron 35.0%
TACATATTACCTATGCAGCA+TGG - chr5.4:71890951-71890970 None:intergenic 35.0%
TACTCTTGTAGTTGAAGTTG+AGG + chr5.4:71892743-71892762 MS.gene038300:CDS 35.0%
TCAGATGTATTTGATGTTGG+GGG + chr5.4:71891358-71891377 MS.gene038300:CDS 35.0%
TCCAATTCAGATTGAGTTTC+CGG - chr5.4:71896865-71896884 None:intergenic 35.0%
TCTATGTCTGAGAGACAAAT+AGG - chr5.4:71896037-71896056 None:intergenic 35.0%
TCTCTCCAATTAGAACAAGT+CGG + chr5.4:71896496-71896515 MS.gene038300:CDS 35.0%
TGAAGCTCAACAGTCAAAAA+GGG + chr5.4:71896132-71896151 MS.gene038300:CDS 35.0%
TGATTTACGATACGGTTATG+TGG + chr5.4:71891011-71891030 MS.gene038300:intron 35.0%
TGCAAAACTACAAGAAGACA+GGG + chr5.4:71896714-71896733 MS.gene038300:CDS 35.0%
TTCAAGAGAAGCCTAGAAAA+GGG - chr5.4:71895981-71896000 None:intergenic 35.0%
TTCTGATTCAAATTGCAGGT+TGG + chr5.4:71894554-71894573 MS.gene038300:intron 35.0%
TTGAAGCTCAACAGTCAAAA+AGG + chr5.4:71896131-71896150 MS.gene038300:CDS 35.0%
TTGCAAAACTACAAGAAGAC+AGG + chr5.4:71896713-71896732 MS.gene038300:CDS 35.0%
TTGCATATGACTTACCAGAA+GGG + chr5.4:71895507-71895526 MS.gene038300:intron 35.0%
TTTCAGTTGTTCAGTAACCA+AGG + chr5.4:71895428-71895447 MS.gene038300:intron 35.0%
TTTGAACTCTTTCCAATACC+CGG + chr5.4:71892533-71892552 MS.gene038300:intron 35.0%
! ACTTGATTTGATCATCAACG+AGG - chr5.4:71896819-71896838 None:intergenic 35.0%
! AGAATATAAGGATGACTTGG+CGG - chr5.4:71892294-71892313 None:intergenic 35.0%
! AGTTTCTTGTTTCCTTGTTC+AGG + chr5.4:71896009-71896028 MS.gene038300:intron 35.0%
! ATATTTGTTGGTGTACAAGG+TGG + chr5.4:71894829-71894848 MS.gene038300:intron 35.0%
! GACCATTTGTCCATGTATTT+TGG + chr5.4:71891623-71891642 MS.gene038300:CDS 35.0%
! GCTGGATCTTTTAATCTCTA+TGG + chr5.4:71895560-71895579 MS.gene038300:intron 35.0%
! GTGTTTACCAGATTGACTTA+TGG - chr5.4:71890984-71891003 None:intergenic 35.0%
! TATTTAGGATTTACACCCCA+TGG + chr5.4:71894698-71894717 MS.gene038300:intron 35.0%
! TCATCAAGAGGTATGAAGAA+TGG - chr5.4:71892687-71892706 None:intergenic 35.0%
! TGCCAGGTATTTTCTTTTTG+AGG + chr5.4:71895889-71895908 MS.gene038300:intron 35.0%
! TTTCATGTATGAAGGCACAT+CGG - chr5.4:71895857-71895876 None:intergenic 35.0%
! TTTGTACAATGGGTTTATGC+AGG + chr5.4:71893139-71893158 MS.gene038300:intron 35.0%
!! AACTTGCTGCAAAAGATGAT+AGG - chr5.4:71892869-71892888 None:intergenic 35.0%
!! ATCGACAGAGTTTTATCAGA+AGG + chr5.4:71896265-71896284 MS.gene038300:CDS 35.0%
!! CCAAGATAATGAAGCATTGA+AGG + chr5.4:71896612-71896631 MS.gene038300:CDS 35.0%
!! GTTTTGAGTATTCTTGTCCT+TGG - chr5.4:71896324-71896343 None:intergenic 35.0%
!! TCGACAGAGTTTTATCAGAA+GGG + chr5.4:71896266-71896285 MS.gene038300:CDS 35.0%
!!! GCTGACTAATTTTGAAGTGT+TGG - chr5.4:71896194-71896213 None:intergenic 35.0%
!!! TGTGGGCTTATTTTGGTATA+TGG + chr5.4:71891029-71891048 MS.gene038300:intron 35.0%
!!! TTTTGAAGTGTTGGATTTGC+TGG - chr5.4:71896185-71896204 None:intergenic 35.0%
AAACATGTCAGTGTCATGTC+AGG + chr5.4:71890910-71890929 MS.gene038300:intron 40.0%
AATTCCTGAAGAAGTTGCTC+AGG - chr5.4:71896361-71896380 None:intergenic 40.0%
ACCTTGCTAAAATTGCTGAC+GGG - chr5.4:71894930-71894949 None:intergenic 40.0%
AGAAGGTAGTCAAAGATAGG+GGG - chr5.4:71894175-71894194 None:intergenic 40.0%
AGTTAGTGGCAAACATAGGT+TGG - chr5.4:71893065-71893084 None:intergenic 40.0%
ATCCTGAAAAAGAAGAGCTG+CGG + chr5.4:71894778-71894797 MS.gene038300:CDS 40.0%
ATCTGCAACGCCAAAATACA+TGG - chr5.4:71891636-71891655 None:intergenic 40.0%
ATCTTGGTTAGTGCTCTTCT+TGG - chr5.4:71896599-71896618 None:intergenic 40.0%
ATGACTTACCAGAAGGGAAA+GGG + chr5.4:71895513-71895532 MS.gene038300:intron 40.0%
ATTCCTGAAGAAGTTGCTCA+GGG - chr5.4:71896360-71896379 None:intergenic 40.0%
ATTGCTGGACTAAGCATATG+CGG + chr5.4:71891120-71891139 MS.gene038300:intron 40.0%
ATTTGAATGAGAAGATGGGG+AGG - chr5.4:71892047-71892066 None:intergenic 40.0%
CAAAGGTCCATAAGTCAATC+TGG + chr5.4:71890974-71890993 MS.gene038300:intron 40.0%
CAATTAATCACACGCAACCT+TGG - chr5.4:71895448-71895467 None:intergenic 40.0%
CATGTTGAAATGAGCAATGC+TGG + chr5.4:71891810-71891829 MS.gene038300:intron 40.0%
CCATGAATGCAGTTGAACAA+TGG + chr5.4:71895772-71895791 MS.gene038300:intron 40.0%
CCATTGTTCAACTGCATTCA+TGG - chr5.4:71895775-71895794 None:intergenic 40.0%
CGCCAAAATACATGGACAAA+TGG - chr5.4:71891628-71891647 None:intergenic 40.0%
CTCGGAAGAATTTGATGCTA+TGG + chr5.4:71896219-71896238 MS.gene038300:CDS 40.0%
CTGGTAAGTCATATGCAAGA+AGG - chr5.4:71895505-71895524 None:intergenic 40.0%
CTTGCATATGACTTACCAGA+AGG + chr5.4:71895506-71895525 MS.gene038300:intron 40.0%
CTTTCAGAAAGCTTCTGCAA+TGG + chr5.4:71895807-71895826 MS.gene038300:CDS 40.0%
GAAAACTGCTCACTTTGTCA+GGG - chr5.4:71893415-71893434 None:intergenic 40.0%
GAAATATGTGCACAATTGCC+AGG + chr5.4:71895873-71895892 MS.gene038300:CDS 40.0%
GACAAATAGGAACCTGAACA+AGG - chr5.4:71896024-71896043 None:intergenic 40.0%
GCATAAATACTCCAACCGTT+GGG - chr5.4:71891671-71891690 None:intergenic 40.0%
GTAACTTAGTGAGCATCAAC+TGG - chr5.4:71895720-71895739 None:intergenic 40.0%
GTTCAAGAGAAGCCTAGAAA+AGG - chr5.4:71895982-71896001 None:intergenic 40.0%
TATGACTTACCAGAAGGGAA+AGG + chr5.4:71895512-71895531 MS.gene038300:intron 40.0%
TCCGGAAACTCAATCTGAAT+TGG + chr5.4:71896861-71896880 MS.gene038300:CDS 40.0%
TCCTCACAATGTTGTTGAGA+AGG - chr5.4:71896534-71896553 None:intergenic 40.0%
TCTCTTATGAGCTGCAAAAG+AGG - chr5.4:71890646-71890665 None:intergenic 40.0%
TGCATAAATACTCCAACCGT+TGG - chr5.4:71891672-71891691 None:intergenic 40.0%
TGCTAGAGAGTTTGACATAC+CGG + chr5.4:71893818-71893837 MS.gene038300:CDS 40.0%
TTAGCAAGTGTTTGCTTCTG+CGG + chr5.4:71895020-71895039 MS.gene038300:intron 40.0%
TTCACAACATACCCTCTTGA+AGG - chr5.4:71892720-71892739 None:intergenic 40.0%
TTGATGTTGGGGGCTATAAA+TGG + chr5.4:71891368-71891387 MS.gene038300:CDS 40.0%
! ACAGATTCAGGTGTTGTGTT+GGG + chr5.4:71890603-71890622 MS.gene038300:CDS 40.0%
! ACGGTTATGTGGGCTTATTT+TGG + chr5.4:71891022-71891041 MS.gene038300:intron 40.0%
! ATTCCTGCGCTTTTGGTATT+GGG + chr5.4:71893845-71893864 MS.gene038300:CDS 40.0%
! ATTTGTTCGGGTTTGAATCC+AGG + chr5.4:71894103-71894122 MS.gene038300:intron 40.0%
! CAAGAGAGTTGAGTTGTGTT+TGG - chr5.4:71896684-71896703 None:intergenic 40.0%
! CTTTTGTCATCTTTAGGTGC+TGG + chr5.4:71895542-71895561 MS.gene038300:intron 40.0%
! GACTTGTTCTAATTGGAGAG+AGG - chr5.4:71896497-71896516 None:intergenic 40.0%
! GTAGAGGATACTTTTCCACT+GGG - chr5.4:71892387-71892406 None:intergenic 40.0%
! TTCATGTATGAAGGCACATC+GGG - chr5.4:71895856-71895875 None:intergenic 40.0%
! TTGTGTTTGGTGGTTTGTGA+AGG - chr5.4:71896671-71896690 None:intergenic 40.0%
!! CGACAGAGTTTTATCAGAAG+GGG + chr5.4:71896267-71896286 MS.gene038300:CDS 40.0%
!! TTTGTTTGTGAAGTGCCGAT+AGG + chr5.4:71893571-71893590 MS.gene038300:intron 40.0%
!!! CTGCACTGGTTTTGTACAAT+GGG + chr5.4:71893129-71893148 MS.gene038300:intron 40.0%
!!! TCTGCACTGGTTTTGTACAA+TGG + chr5.4:71893128-71893147 MS.gene038300:intron 40.0%
!!! TTGTTTTTGGAAGTGAAGCG+TGG + chr5.4:71894587-71894606 MS.gene038300:intron 40.0%
!!! TTTTTTTAAGGGGTGCCTTC+CGG - chr5.4:71892555-71892574 None:intergenic 40.0%
AACTCTTTCCAATACCCGGA+AGG + chr5.4:71892537-71892556 MS.gene038300:intron 45.0%
AAGAAGTTGCTCAGGGAGAT+TGG - chr5.4:71896353-71896372 None:intergenic 45.0%
ACCTGAAAATGCCACCATTG+TGG + chr5.4:71891249-71891268 MS.gene038300:CDS 45.0%
AGAAAAAGCCCTTTCCCTTC+TGG - chr5.4:71895524-71895543 None:intergenic 45.0%
AGAAGTTGCTCAGGGAGATT+GGG - chr5.4:71896352-71896371 None:intergenic 45.0%
AGCCAAGTGAAAAGAAGCTG+GGG - chr5.4:71894131-71894150 None:intergenic 45.0%
AGGGAGTGATAAGGGGTTAA+GGG - chr5.4:71892246-71892265 None:intergenic 45.0%
AGTATCCTCTACCTTTACCG+CGG + chr5.4:71892395-71892414 MS.gene038300:intron 45.0%
AGTTGAGGTAACACGCAATG+TGG + chr5.4:71892758-71892777 MS.gene038300:CDS 45.0%
ATAGAGACCACTCCTGATGA+AGG + chr5.4:71896157-71896176 MS.gene038300:CDS 45.0%
CAGAAAATTTGCCCAACGGT+TGG + chr5.4:71891657-71891676 MS.gene038300:CDS 45.0%
CCAAGAAGTCTGCATGATTG+TGG + chr5.4:71891913-71891932 MS.gene038300:intron 45.0%
CCACAATCATGCAGACTTCT+TGG - chr5.4:71891916-71891935 None:intergenic 45.0%
CCTTGCACAACAGATTGGAA+AGG + chr5.4:71893367-71893386 MS.gene038300:CDS 45.0%
CCTTTCCAATCTGTTGTGCA+AGG - chr5.4:71893370-71893389 None:intergenic 45.0%
CGAAAACTGCTCACTTTGTC+AGG - chr5.4:71893416-71893435 None:intergenic 45.0%
GAAGACCTTGCACAACAGAT+TGG + chr5.4:71893362-71893381 MS.gene038300:CDS 45.0%
GAAGTCTGCATGATTGTGGT+AGG + chr5.4:71891917-71891936 MS.gene038300:intron 45.0%
GAGCCAAGTGAAAAGAAGCT+GGG - chr5.4:71894132-71894151 None:intergenic 45.0%
GCCGAATAGGACGATATGTA+TGG - chr5.4:71893884-71893903 None:intergenic 45.0%
GCCTTCTCAACAACATTGTG+AGG + chr5.4:71896530-71896549 MS.gene038300:CDS 45.0%
GCTTCCTCTGTTTGTCTCAT+TGG - chr5.4:71893906-71893925 None:intergenic 45.0%
GGGAAAGAGTAATGTACGAG+TGG - chr5.4:71892107-71892126 None:intergenic 45.0%
GTAGTCAAAGATAGGGGGTT+GGG - chr5.4:71894170-71894189 None:intergenic 45.0%
GTTTGTCTCATTGGCCGAAT+AGG - chr5.4:71893897-71893916 None:intergenic 45.0%
TAGGGAGTGATAAGGGGTTA+AGG - chr5.4:71892247-71892266 None:intergenic 45.0%
TCTACTTACCCTTGCATGGT+CGG - chr5.4:71892799-71892818 None:intergenic 45.0%
TGAGCCAAGTGAAAAGAAGC+TGG - chr5.4:71894133-71894152 None:intergenic 45.0%
TGCAGACTTCTTGGAGAAAG+TGG - chr5.4:71891907-71891926 None:intergenic 45.0%
TTGCTGGACTAAGCATATGC+GGG + chr5.4:71891121-71891140 MS.gene038300:intron 45.0%
TTGTTTGGGTCAAGCAGTCA+TGG + chr5.4:71895405-71895424 MS.gene038300:intron 45.0%
TTTCACCGTAGAATGCAAGC+TGG + chr5.4:71895103-71895122 MS.gene038300:intron 45.0%
TTTGATCATCAACGAGGTGC+TGG - chr5.4:71896813-71896832 None:intergenic 45.0%
! ACAATGGGTTTATGCAGGAG+AGG + chr5.4:71893144-71893163 MS.gene038300:intron 45.0%
! ACCTCGCGGAAAAATGCTTT+TGG + chr5.4:71891969-71891988 MS.gene038300:intron 45.0%
! GACAGATTCAGGTGTTGTGT+TGG + chr5.4:71890602-71890621 MS.gene038300:CDS 45.0%
! GAGAGTTGAGTTGTGTTTGG+TGG - chr5.4:71896681-71896700 None:intergenic 45.0%
! GATTCCTGCGCTTTTGGTAT+TGG + chr5.4:71893844-71893863 MS.gene038300:CDS 45.0%
! GGGAAACTCACCATGACTTT+TGG + chr5.4:71892416-71892435 MS.gene038300:intron 45.0%
! GGTAGAGGATACTTTTCCAC+TGG - chr5.4:71892388-71892407 None:intergenic 45.0%
! TACCGCAGCTCTTCTTTTTC+AGG - chr5.4:71894783-71894802 None:intergenic 45.0%
! TCCACAATGGTGGCATTTTC+AGG - chr5.4:71891253-71891272 None:intergenic 45.0%
! TGGTGGTGACTACACAAAAG+TGG - chr5.4:71892496-71892515 None:intergenic 45.0%
!! ACCCGTCAGCAATTTTAGCA+AGG + chr5.4:71894926-71894945 MS.gene038300:CDS 45.0%
!! CAGCACCGACTTGTTCTAAT+TGG - chr5.4:71896504-71896523 None:intergenic 45.0%
!! GATTTGCTGGTACCTTCATC+AGG - chr5.4:71896172-71896191 None:intergenic 45.0%
!!! ACCAAAAGCATTTTTCCGCG+AGG - chr5.4:71891973-71891992 None:intergenic 45.0%
!!! ATGGTGGCATTTTCAGGTTG+AGG - chr5.4:71891247-71891266 None:intergenic 45.0%
!!! TTTTTTAAGGGGTGCCTTCC+GGG - chr5.4:71892554-71892573 None:intergenic 45.0%
!! AGAAATTAATAATTAAATAT+TGG - chr5.4:71893004-71893023 None:intergenic 5.0%
!! TATTAAAAATTTACTAAAAA+TGG - chr5.4:71894279-71894298 None:intergenic 5.0%
!!! TGATTTTATAATATAAAAAA+AGG - chr5.4:71894319-71894338 None:intergenic 5.0%
AAGTCATGGTGAGTTTCCCG+CGG - chr5.4:71892415-71892434 None:intergenic 50.0%
AATGGAGAAGGATCCTTGCC+AGG - chr5.4:71891283-71891302 None:intergenic 50.0%
AGAAGGGTCTAACTACCCAG+TGG + chr5.4:71892369-71892388 MS.gene038300:intron 50.0%
AGAGAGTTTGACATACCGGC+TGG + chr5.4:71893822-71893841 MS.gene038300:CDS 50.0%
AGTGATAAGGAGGTCGGCTA+GGG - chr5.4:71892265-71892284 None:intergenic 50.0%
CAAGTGTTTGCTTCTGCGGT+AGG + chr5.4:71895024-71895043 MS.gene038300:intron 50.0%
CTAGGGAGTGATAAGGAGGT+CGG - chr5.4:71892271-71892290 None:intergenic 50.0%
GAATGAGAAGATGGGGAGGT+AGG - chr5.4:71892043-71892062 None:intergenic 50.0%
GCCAAGTGAAAAGAAGCTGG+GGG - chr5.4:71894130-71894149 None:intergenic 50.0%
GCTGAGGACTCTGTGACAAA+AGG + chr5.4:71891725-71891744 MS.gene038300:CDS 50.0%
GGTAGTCAAAGATAGGGGGT+TGG - chr5.4:71894171-71894190 None:intergenic 50.0%
GTATCCTCTACCTTTACCGC+GGG + chr5.4:71892396-71892415 MS.gene038300:intron 50.0%
GTCATGTCAGGTGTTCGTGT+CGG + chr5.4:71890922-71890941 MS.gene038300:intron 50.0%
GTGTTGGGTCTGTGTTGTGT+TGG + chr5.4:71890618-71890637 MS.gene038300:CDS 50.0%
TCGGCCAATGAGACAAACAG+AGG + chr5.4:71893899-71893918 MS.gene038300:CDS 50.0%
TCTCCCTGAGCAACTTCTTC+AGG + chr5.4:71896354-71896373 MS.gene038300:CDS 50.0%
TTTGGAAGTGAAGCGTGGAC+CGG + chr5.4:71894592-71894611 MS.gene038300:intron 50.0%
! ACCCCCAGCTTCTTTTCACT+TGG + chr5.4:71894126-71894145 MS.gene038300:intron 50.0%
! ATAAGGATGACTTGGCGGCT+AGG - chr5.4:71892289-71892308 None:intergenic 50.0%
! ATGAAGGCACATCGGGATAG+CGG - chr5.4:71895849-71895868 None:intergenic 50.0%
! TAAGGATGACTTGGCGGCTA+GGG - chr5.4:71892288-71892307 None:intergenic 50.0%
! TCATGCTCTCTCTTGGTGAC+TGG - chr5.4:71894732-71894751 None:intergenic 50.0%
! TCTCTCTTGGTGACTGGTAC+TGG - chr5.4:71894726-71894745 None:intergenic 50.0%
! TTGCCCAATACCAAAAGCGC+AGG - chr5.4:71893851-71893870 None:intergenic 50.0%
!! GTGACTGGTACTGGTACCAT+GGG - chr5.4:71894717-71894736 None:intergenic 50.0%
!! TGACTGGTACTGGTACCATG+GGG - chr5.4:71894716-71894735 None:intergenic 50.0%
!! TGCGCTTTTGGTATTGGGCA+AGG + chr5.4:71893850-71893869 MS.gene038300:CDS 50.0%
AAGACATCGCCGACCATGCA+AGG + chr5.4:71892787-71892806 MS.gene038300:CDS 55.0%
ACCATTGTGGATAGCCAGCC+TGG + chr5.4:71891262-71891281 MS.gene038300:CDS 55.0%
ACCGTAGAATGCAAGCTGGC+TGG + chr5.4:71895107-71895126 MS.gene038300:intron 55.0%
AGACATCGCCGACCATGCAA+GGG + chr5.4:71892788-71892807 MS.gene038300:CDS 55.0%
AGGTCGGCTAGGGAGTGATA+AGG - chr5.4:71892255-71892274 None:intergenic 55.0%
CCATCGCATTGTCCCCTTCT+GGG - chr5.4:71891604-71891623 None:intergenic 55.0%
CCCAGCCAGCTTGCATTCTA+CGG - chr5.4:71895111-71895130 None:intergenic 55.0%
CCGTAGAATGCAAGCTGGCT+GGG + chr5.4:71895108-71895127 MS.gene038300:intron 55.0%
GAGTGATAAGGAGGTCGGCT+AGG - chr5.4:71892266-71892285 None:intergenic 55.0%
GCTGGTACCTTCATCAGGAG+TGG - chr5.4:71896167-71896186 None:intergenic 55.0%
GGTCGGCTAGGGAGTGATAA+GGG - chr5.4:71892254-71892273 None:intergenic 55.0%
GTCAAAGATAGGGGGTTGGG+TGG - chr5.4:71894167-71894186 None:intergenic 55.0%
GTCGGCTAGGGAGTGATAAG+GGG - chr5.4:71892253-71892272 None:intergenic 55.0%
GTTTCCCGCGGTAAAGGTAG+AGG - chr5.4:71892403-71892422 None:intergenic 55.0%
TCCATCGCATTGTCCCCTTC+TGG - chr5.4:71891605-71891624 None:intergenic 55.0%
TGAAAAGAAGCTGGGGGTCC+TGG - chr5.4:71894124-71894143 None:intergenic 55.0%
TGGTGAGTTTCCCGCGGTAA+AGG - chr5.4:71892409-71892428 None:intergenic 55.0%
TGTCGGAGTCCATGCTGCAT+AGG + chr5.4:71890939-71890958 MS.gene038300:intron 55.0%
TTGGCGGCTAGGGAGTGATA+AGG - chr5.4:71892278-71892297 None:intergenic 55.0%
! AGGCTGGCTATCCACAATGG+TGG - chr5.4:71891263-71891282 None:intergenic 55.0%
! CAAAAGCGCAGGAATCCAGC+CGG - chr5.4:71893840-71893859 None:intergenic 55.0%
!! GGTGACTGGTACTGGTACCA+TGG - chr5.4:71894718-71894737 None:intergenic 55.0%
AAGATGGGGAGGTAGGCACG+TGG - chr5.4:71892036-71892055 None:intergenic 60.0%
CCCAGAAGGGGACAATGCGA+TGG + chr5.4:71891601-71891620 MS.gene038300:CDS 60.0%
GAGAAGGATCCTTGCCAGGC+TGG - chr5.4:71891279-71891298 None:intergenic 60.0%
GCGACTGCGGTGGATAGATG+TGG + chr5.4:71895134-71895153 MS.gene038300:intron 60.0%
GCGGCTAGGGAGTGATAAGG+AGG - chr5.4:71892275-71892294 None:intergenic 60.0%
TAGGGGGTTGGGTGGCTCAA+CGG - chr5.4:71894159-71894178 None:intergenic 60.0%
TGTGGATAGCCAGCCTGGCA+AGG + chr5.4:71891267-71891286 MS.gene038300:CDS 60.0%
! CGGCTGGATTCCTGCGCTTT+TGG + chr5.4:71893838-71893857 MS.gene038300:CDS 60.0%
! GCCAGGCTGGCTATCCACAA+TGG - chr5.4:71891266-71891285 None:intergenic 60.0%
!! AAGGGGTGCCTTCCGGGTAT+TGG - chr5.4:71892548-71892567 None:intergenic 60.0%
AGGGGGTTGGGTGGCTCAAC+GGG - chr5.4:71894158-71894177 None:intergenic 65.0%
GCTGGCTGGGCGTGCGACTG+CGG + chr5.4:71895121-71895140 MS.gene038300:intron 75.0%
! GGCTGGGCGTGCGACTGCGG+TGG + chr5.4:71895124-71895143 MS.gene038300:intron 80.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 71890600 71896933 71890600 ID=MS.gene038300
chr5.4 mRNA 71890600 71896933 71890600 ID=MS.gene038300.t1;Parent=MS.gene038300
chr5.4 exon 71890600 71890684 71890600 ID=MS.gene038300.t1.exon1;Parent=MS.gene038300.t1
chr5.4 CDS 71890600 71890684 71890600 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
chr5.4 exon 71891242 71891389 71891242 ID=MS.gene038300.t1.exon2;Parent=MS.gene038300.t1
chr5.4 CDS 71891242 71891389 71891242 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
chr5.4 exon 71891586 71891746 71891586 ID=MS.gene038300.t1.exon3;Parent=MS.gene038300.t1
chr5.4 CDS 71891586 71891746 71891586 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
chr5.4 exon 71892640 71892809 71892640 ID=MS.gene038300.t1.exon4;Parent=MS.gene038300.t1
chr5.4 CDS 71892640 71892809 71892640 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
chr5.4 exon 71893161 71893241 71893161 ID=MS.gene038300.t1.exon5;Parent=MS.gene038300.t1
chr5.4 CDS 71893161 71893241 71893161 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
chr5.4 exon 71893350 71893469 71893350 ID=MS.gene038300.t1.exon6;Parent=MS.gene038300.t1
chr5.4 CDS 71893350 71893469 71893350 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
chr5.4 exon 71893810 71893932 71893810 ID=MS.gene038300.t1.exon7;Parent=MS.gene038300.t1
chr5.4 CDS 71893810 71893932 71893810 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
chr5.4 exon 71894705 71894799 71894705 ID=MS.gene038300.t1.exon8;Parent=MS.gene038300.t1
chr5.4 CDS 71894705 71894799 71894705 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
chr5.4 exon 71894891 71894999 71894891 ID=MS.gene038300.t1.exon9;Parent=MS.gene038300.t1
chr5.4 CDS 71894891 71894999 71894891 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
chr5.4 exon 71895635 71895703 71895635 ID=MS.gene038300.t1.exon10;Parent=MS.gene038300.t1
chr5.4 CDS 71895635 71895703 71895635 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
chr5.4 exon 71895784 71895894 71895784 ID=MS.gene038300.t1.exon11;Parent=MS.gene038300.t1
chr5.4 CDS 71895784 71895894 71895784 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
chr5.4 exon 71896031 71896933 71896031 ID=MS.gene038300.t1.exon12;Parent=MS.gene038300.t1
chr5.4 CDS 71896031 71896933 71896031 ID=cds.MS.gene038300.t1;Parent=MS.gene038300.t1
Gene Sequence

>MS.gene038300

ATGACAGATTCAGGTGTTGTGTTGGGTCTGTGTTGTGTTGGTACCTCTTTTGCAGCTCATAAGAGAAGAAAGACAACAGATTCAGGTATTCAATGTCATCATCTTTTACCCATTTGATTACTAGTAATGTCTTTTTTATTTTTATAAATAGTAGTAATGTCTTCTTTGCTATGTAAAATGATATGCTATGAAACTAGTAATGTCTTTTTTTATAAATAATAAATATCTTTGTAGCGGTGTCGGTGTCCAATGTTTTTTGCATTTATCTAGCAGTGTCAACATGTCAGTGTCGTTCCCTCAAAAAAAAAAAAAACATGTCAGTGTCATGTCAGGTGTTCGTGTCGGAGTCCATGCTGCATAGGTAATATGTAACTCAAAGGTCCATAAGTCAATCTGGTAAACACGGATGAATGATTTACGATACGGTTATGTGGGCTTATTTTGGTATATGGTTCATAAACTTCAAAATCATATTCACGAACTCATGACATATACACCAATCATGTTCATGTACTTTTACATTGCTGGACTAAGCATATGCGGGACTACTCTTATTTGTTTTACCTCTCCAAGTTTTGAGATAATTCAAGTCTTGATACTTACTTAATTGCTCTTTTTATTTATTTTTATGAACATTAGTAGGTCCTCAACCTGAAAATGCCACCATTGTGGATAGCCAGCCTGGCAAGGATCCTTCTCCATTTAAATTCACATGGAGAATTGAAAGATTTTCTTGGAGGAATGAGATAAAGATCTGTTCAGATGTATTTGATGTTGGGGGCTATAAATGGTATCCCCTGAATCTATTCATGATGTTTATCTTTCTATTTCAGTTGACGTGATATACAATATAATATTTTGGTTTTGTTTGACCCATGTAGATTCTATCTATTGGAGGAAGTGATTTTGTTGCAGTTGTTACATTAGTTCCTGTGTGTATTTATCATCTGTGATCCCTTCTAATGTTTTTTCTTTTATCTGATCAGGCATGTAATTATTTTCCCAGAAGGGGACAATGCGATGGACCATTTGTCCATGTATTTTGGCGTTGCAGATTCAGAAAATTTGCCCAACGGTTGGAGTATTTATGCACAGTTTAGCATGTCATTAGTTAATCAAATCAATGCTGAGGACTCTGTGACAAAAGGTACCCTATTCAGTATTCAGTTTGTTCCTTACCGTTGTTATAAAATGATCTACCATATGCATGCATGTTGAAATGAGCAATGCTGGAATTAAAAGCAAAGAATGTTGTAAAATTTTTGTTGCATTTGTTGAAAGAGAATTTTATACTTGTTGCACTGCCACTTTCTCCAAGAAGTCTGCATGATTGTGGTAGGTTGTTTTCTGATTAACCAATAATTTTTTAACCTCGCGGAAAAATGCTTTTGGTGTTGATATAAATTTCAGAATCTTGCTAAATTAGTTTCTTTCCACGTGCCTACCTCCCCATCTTCTCATTCAAATTTTACGTCATTGAACTTTTCTACTTGACTTGAAACTACCACTCGTACATTACTCTTTCCCTGATCAGATATATTTTTGGATCAAAATCTGAAAATAATTATAGTCTTTTTTTTTTTTTTTTTTAAATTGTCAATGTTGGTATTGTTAGTATTATATATGTTGGCAGTGGGGTTGAACCCTTAACCCCTTATCACTCCCTAGCCGACCTCCTTATCACTCCCTAGCCGCCAAGTCATCCTTATATTCTCAATCATATTACTTGTCTTCAATAGACTTTTGTTAGTATTGACATGTTGAATAAAAGAAGGGTCTAACTACCCAGTGGAAAAGTATCCTCTACCTTTACCGCGGGAAACTCACCATGACTTTTGGTAGTTTATGAGAGAAAAATGTGGGAGAGAAAGAAGAGATAACATGAGAGAGCAGCCACTTTTGTGTAGTCACCACCATGACTTCAATTCTCTTTTTTGAACTCTTTCCAATACCCGGAAGGCACCCCTTAAAAAAAAGTGAAAATGCACATATTTTTGGGCAAAGCTGTGTTATTTTTGTAACTTTGTTTGTACTATGCAGACTTGCAGCACCGATTCAATGAACAAGAATGTGATTGGGGCGAGCCATTCTTCATACCTCTTGATGAATTATCTGATCCTTCAAGAGGGTATGTTGTGAATAATACTCTTGTAGTTGAAGTTGAGGTAACACGCAATGTGGATGAGAAAGACATCGCCGACCATGCAAGGGTAAGTAGATATTCTTACGTACTTTAGAGCCCAAAATAAATCAAGTCAGGTAGCGACCTATCATCTTTTGCAGCAAGTTTAACTTCCAAATAAGTTTAGAGCTCTAATTTATTTTATGATTGATATAAGAACGCGTGTCATATTCGACTATTGCAATCAATGACTGTTCCTGACCAAAAGTATTTCCTAAACCAATATTTAATTATTAATTTCTCATGAGATGTTCCTTATGAGTATTTCAAGACAATAAAACCAACCTATGTTTGCCACTAACTTTTAATTTCTGTTGTACTTTTTCTGTTGGTCTATTCTGTAAAATCTGCACTGGTTTTGTACAATGGGTTTATGCAGGAGAGGTTGAAGAAAGACCAGAAAGTACAAAAGCACAAAAATAAAGAAAACGCAGAGGCTCACCTCTACACTATTATAAAGGTGTTCTAAGCTTGCTTCCCTAGAAACTAGTAATGTTTGTTTCTTTAGATTCATCTTGTTAATTGCTCAATCAGATTGTATTTATGTTTATACTGATAACTTAATTAGGTGGTACGAGATGAAGACCTTGCACAACAGATTGGAAAGGATATATATTTTGATCTTGTTGACCCTGACAAAGTGAGCAGTTTTCGTGTTCCCAAGAATACGACATTTAAAGATTTCAAGGTATCATCATTAGTTAGGCAATTACCTTGTGAATAATTGCATTAACTTTTTGTACCATCTTCTCAAATATACACATAAAGAGTTATGGAAGTTGGGAAAGTTTTGTTTGTGAAGTGCCGATAGGAAAATCATTATTTTCGATGCATCCTCATAGAGAACAATTTTTTAAAAAAACTGTACTAAAATATTAAAAGCATGATGCTTTAGTTGGAAGAAGAAAAAAATTCCTCATATTAAATCCTTGTGGTTTTTACACTTTTGATTTTGTAATTTAAAATATATTTTATAATGTTTTTTTGTAAAGTTTGATTTTCTGTTTGATTGTTAATGTGATATGTAGAAATTGCTTGCTAGAGAGTTTGACATACCGGCTGGATTCCTGCGCTTTTGGTATTGGGCAAGGAGTCAAAACCATACATATCGTCCTATTCGGCCAATGAGACAAACAGAGGAAGCAAGAAGCGTAAGTTCATTTGCTATATGTTGACTCTGTTCATGACATTTTACACCAACAGTTAATTCTATGTGTTTGCTTTGTTTGTCTTTATCGTTATTTTTTCCATCCTTGGCTACCTTTAATTTTTTTTTTAATGACAAATGTTAGTAGTTAGTTTGTTATATTAATATTTACTCATTTGTTCGGGTTTGAATCCAGGACCCCCAGCTTCTTTTCACTTGGCTCAAACCCGTTGAGCCACCCAACCCCCTATCTTTGACTACCTTCTTTTTATTTCTTCAAATTGTATAATGTATACAGGGATGCATCTAATATGGGTCTCAAAAAAAGGGTCTAAATGTGGACCATACCATTTTTAGTAAATTTTTAATAAAACATTAGATCTCTTTCCTTTTTTTATATTATAAAATCAATTATATTACTAAAAACAGTAAGTGTTCATCTTTGCACCTTTTTTAATAGGTCTGTATCAATGCACAAATGTATATGCAATAAATGCAAGTGGTTTTTTGTATGATTATTTTGGATCGCATAGTTTTTTTTTCTTTCTCATATTAATTGGAGATTCATTTTCTGTGCAGCCCATCAATTTCTCTATGATCTGAAGTTTTTTCAATATTTTTCTCATTCTGATTCAAATTGCAGGTTGGACAAATTGTATTGTTTTTGGAAGTGAAGCGTGGACCGGTAACATTTAAATTGTGAAGTTGTATACTATTTTAATGTTATATAACATCATTCAAGCATAGTCCTGTTGACAAACTACGTTATTATTTAGGATTTACACCCCATGGTACCAGTACCAGTCACCAAGAGAGAGCATGACATATTACTTTTTTTCAAGTTATATGATCCTGAAAAAGAAGAGCTGCGGTACTGAATAATTTTTTGTGCTGATTTTAATATTTGTTGGTGTACAAGGTGGACCTGAGTTGACATCAAATGTATTTTCCTTCTATGGCAGTTATGTTGGAAGGCTCTTTGTTAACTGTTATAGTAACCCGTCAGCAATTTTAGCAAGGTTAAATAAATTGGCTGGTTATGATCTTGATGAAGAGATTGAACTTTATGAGGTTAGTTTGTGTTGTCTGATTTAGCAAGTGTTTGCTTCTGCGGTAGGTTTTAGCCAGACGTGTTTTTTTTTTTTTTTTAAGCTACCCTTTATAGCTTCTTGATTTTCACCGTAGAATGCAAGCTGGCTGGGCGTGCGACTGCGGTGGATAGATGTGGATCCAAACACGCTATTAATTTATATACACTGTCGGCGTAAAGATTTTTTTTTACGTTGTCAATCAATCATAATTGTCAGAGTATTAAAAATGTTTGACTTAAATTATTGTGATTTGCTGACATTCTAAAATTTACATTTTCTGACAATGTATAAAAATTAAACTCTTCATGATTTATCTGTTGTACAACATAAAAATTTCAAATTGTAGTGCATCCTTGCATGTGCAGAAGAAATATACTTTGTTATTTTGTTTGGGTCAAGCAGTCATGGTTTCAGTTGTTCAGTAACCAAGGTTGCGTGTGATTAATTGCAAATAAAGTGCATCATGGTCTATGGAAGTTAATCCTTCTTGCATATGACTTACCAGAAGGGAAAGGGCTTTTTCTTTTGTCATCTTTAGGTGCTGGATCTTTTAATCTCTATGGGTGACTTTAATCATGTAGCGTTACTGAGTTAATTGTGTGTATTGTTGTGCAGGAAATTGAGTTTGAACCAAATGTTAAATGTGATCCTGTTGACAAGAAATTAACACTTACAGAAAGCAAGGTATAGCACATACCCAGTTGATGCTCACTAAGTTACTTTATCATTGATTTTCATATTGATTTGTTTTTCCATGAATGCAGTTGAACAATGGTGCTATTATATGCTTTCAGAAAGCTTCTGCAATGGATAACGAGAAACATTTCCGCTATCCCGATGTGCCTTCATACATGAAATATGTGCACAATTGCCAGGTATTTTCTTTTTGAGGTTTATTTAAAGGAAATTAGTTTTGTTTGATGTGATGCAAAAATGAAAGCTACTTATTTATTCTTATCCCTTTTCTAGGCTTCTCTTGAACTGAACTCAGTTTCTTGTTTCCTTGTTCAGGTTCCTATTTGTCTCTCAGACATAGAACCGAAAGATGAAGAATCTTTAGAGGAGCAAAACGAAAACCTTATAGTCGAAGAAACGATTGTTGATAAAAACATTGAAGCTCAACAGTCAAAAAGGGAAATAGAGACCACTCCTGATGAAGGTACCAGCAAATCCAACACTTCAAAATTAGTCAGCATAGACTCGGAAGAATTTGATGCTATGGTAGATGAGGATGTCATTGCTGCTATCGACAGAGTTTTATCAGAAGGGGTTACTCTTTCCTTAAAATCTCAACATTCTGTCCAAGGACAAGAATACTCAAAACGGGATCCCAATCTCCCTGAGCAACTTCTTCAGGAATTAAGGGATATTGCTTTTAAAGGAGACTTGGTTGAAAAATTGAAAGAAGGTCTCACTCCTAAAGTTAACTTCAACGCAATCAAGGAAAAAATTGACGCTAATGCTGATGCGTTTTCCTCTCTCCAATTAGAACAAGTCGGTGCTGTTGTTAGCCTTCTCAACAACATTGTGAGGATGCTTGAAAAAATTGAAAATTTGAAAAAAGAGCGAGACTTAGCCAAGAAGAGCACTAACCAAGATAATGAAGCATTGAAGGAAACCAGACAGAAAATATTGAACTCAATGACTTCCTTCACAAACCACCAAACACAACTCAACTCTCTTGATGCTCAGATTGCAAAACTACAAGAAGACAGGGCCAAAATTGCTGAGATTCAAGATCAAGAGAAAGATAAGATTACATCTTTGAATAAAGATGTTAAGTCAATTTTCCAGCACCTCGTTGATGATCAAATCAAGTTGAAAAGTGTTGAAGATCAAATTCCGGAAACTCAATCTGAATTGGAAGGTTATGAGAAGCTCTTTCAAATCTTCAAGAAAATCCCTCCATTTTGA
Protein sequence

>MS.gene038300.t1

MTDSGVVLGLCCVGTSFAAHKRRKTTDSGPQPENATIVDSQPGKDPSPFKFTWRIERFSWRNEIKICSDVFDVGGYKWHVIIFPEGDNAMDHLSMYFGVADSENLPNGWSIYAQFSMSLVNQINAEDSVTKDLQHRFNEQECDWGEPFFIPLDELSDPSRGYVVNNTLVVEVEVTRNVDEKDIADHARERLKKDQKVQKHKNKENAEAHLYTIIKVVRDEDLAQQIGKDIYFDLVDPDKVSSFRVPKNTTFKDFKKLLAREFDIPAGFLRFWYWARSQNHTYRPIRPMRQTEEARSDLHPMVPVPVTKREHDILLFFKLYDPEKEELRYVGRLFVNCYSNPSAILARLNKLAGYDLDEEIELYEEIEFEPNVKCDPVDKKLTLTESKLNNGAIICFQKASAMDNEKHFRYPDVPSYMKYVHNCQVPICLSDIEPKDEESLEEQNENLIVEETIVDKNIEAQQSKREIETTPDEGTSKSNTSKLVSIDSEEFDAMVDEDVIAAIDRVLSEGVTLSLKSQHSVQGQEYSKRDPNLPEQLLQELRDIAFKGDLVEKLKEGLTPKVNFNAIKEKIDANADAFSSLQLEQVGAVVSLLNNIVRMLEKIENLKKERDLAKKSTNQDNEALKETRQKILNSMTSFTNHQTQLNSLDAQIAKLQEDRAKIAEIQDQEKDKITSLNKDVKSIFQHLVDDQIKLKSVEDQIPETQSELEGYEKLFQIFKKIPPF