Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038342.t1 | AET00387.2 | 61.4 | 805 | 237 | 6 | 1 | 744 | 1 | 792 | 1.50E-251 | 879 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038342.t1 | Q9FPT1 | 31.2 | 798 | 187 | 6 | 39 | 482 | 52 | 841 | 1.9e-88 | 328.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038342.t1 | G7KD59 | 61.4 | 805 | 237 | 6 | 1 | 744 | 1 | 792 | 1.1e-251 | 879.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038342.t1 | MTR_5g091450 | 63.727 | 805 | 218 | 7 | 1 | 744 | 1 | 792 | 0.0 | 939 |
MS.gene038342.t1 | MTR_5g091180 | 64.011 | 728 | 225 | 8 | 1 | 717 | 1 | 702 | 0.0 | 838 |
MS.gene038342.t1 | MTR_5g091430 | 68.488 | 549 | 168 | 3 | 199 | 744 | 4 | 550 | 0.0 | 714 |
MS.gene038342.t1 | MTR_5g091530 | 85.891 | 404 | 35 | 2 | 83 | 484 | 1 | 384 | 0.0 | 709 |
MS.gene038342.t1 | MTR_5g091410 | 61.538 | 559 | 186 | 4 | 186 | 744 | 20 | 549 | 0.0 | 609 |
MS.gene038342.t1 | MTR_5g091550 | 62.527 | 467 | 163 | 5 | 39 | 496 | 15 | 478 | 0.0 | 546 |
MS.gene038342.t1 | MTR_5g091550 | 61.864 | 472 | 163 | 6 | 39 | 496 | 15 | 483 | 0.0 | 541 |
MS.gene038342.t1 | MTR_5g086700 | 72.695 | 282 | 76 | 1 | 164 | 444 | 533 | 814 | 6.45e-118 | 381 |
MS.gene038342.t1 | MTR_5g086700 | 61.972 | 142 | 49 | 2 | 28 | 165 | 42 | 182 | 1.99e-46 | 179 |
MS.gene038342.t1 | MTR_5g086700 | 72.695 | 282 | 76 | 1 | 164 | 444 | 533 | 814 | 7.02e-118 | 381 |
MS.gene038342.t1 | MTR_5g086700 | 61.972 | 142 | 49 | 2 | 28 | 165 | 42 | 182 | 2.07e-46 | 179 |
MS.gene038342.t1 | MTR_3g079840 | 69.504 | 282 | 85 | 1 | 164 | 444 | 528 | 809 | 2.31e-114 | 372 |
MS.gene038342.t1 | MTR_3g079840 | 58.333 | 144 | 53 | 2 | 28 | 165 | 35 | 177 | 6.52e-44 | 171 |
MS.gene038342.t1 | MTR_3g079840 | 69.504 | 282 | 85 | 1 | 164 | 444 | 529 | 810 | 2.33e-114 | 372 |
MS.gene038342.t1 | MTR_3g079840 | 58.333 | 144 | 53 | 2 | 28 | 165 | 36 | 178 | 6.88e-44 | 171 |
MS.gene038342.t1 | MTR_1g041240 | 58.363 | 281 | 115 | 2 | 164 | 442 | 530 | 810 | 7.77e-93 | 313 |
MS.gene038342.t1 | MTR_1g041240 | 49.664 | 149 | 67 | 3 | 27 | 169 | 37 | 183 | 3.46e-36 | 147 |
MS.gene038342.t1 | MTR_1g041240 | 58.363 | 281 | 115 | 2 | 164 | 442 | 529 | 809 | 7.99e-93 | 313 |
MS.gene038342.t1 | MTR_1g041240 | 50.340 | 147 | 65 | 3 | 29 | 169 | 38 | 182 | 4.71e-36 | 147 |
MS.gene038342.t1 | MTR_1g041240 | 58.363 | 281 | 115 | 2 | 164 | 442 | 528 | 808 | 8.30e-93 | 313 |
MS.gene038342.t1 | MTR_1g041240 | 49.664 | 149 | 67 | 3 | 27 | 169 | 35 | 181 | 3.61e-36 | 147 |
MS.gene038342.t1 | MTR_1g042160 | 28.125 | 192 | 127 | 4 | 43 | 223 | 13 | 204 | 3.54e-20 | 92.4 |
MS.gene038342.t1 | MTR_1g073800 | 35.577 | 104 | 66 | 1 | 40 | 143 | 46 | 148 | 1.69e-16 | 83.2 |
MS.gene038342.t1 | MTR_1g073790 | 35.577 | 104 | 66 | 1 | 40 | 143 | 59 | 161 | 2.46e-15 | 80.9 |
MS.gene038342.t1 | MTR_1g044450 | 35.644 | 101 | 64 | 1 | 43 | 143 | 65 | 164 | 7.68e-15 | 79.3 |
MS.gene038342.t1 | MTR_5g091460 | 78.571 | 42 | 9 | 0 | 199 | 240 | 4 | 45 | 2.74e-14 | 68.2 |
MS.gene038342.t1 | MTR_7g107200 | 31.746 | 126 | 84 | 2 | 40 | 163 | 10 | 135 | 7.69e-14 | 74.3 |
MS.gene038342.t1 | MTR_7g107160 | 31.579 | 133 | 78 | 4 | 44 | 165 | 131 | 261 | 1.05e-12 | 71.2 |
MS.gene038342.t1 | MTR_3g106700 | 30.328 | 122 | 82 | 2 | 45 | 163 | 70 | 191 | 3.00e-12 | 70.9 |
MS.gene038342.t1 | MTR_8g006190 | 33.613 | 119 | 61 | 4 | 61 | 166 | 10 | 123 | 8.05e-12 | 68.6 |
MS.gene038342.t1 | MTR_4g123750 | 32.836 | 134 | 81 | 3 | 35 | 159 | 11 | 144 | 3.33e-11 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene038342.t1 | AT3G11910 | 60.219 | 274 | 107 | 2 | 164 | 436 | 526 | 798 | 7.62e-95 | 319 |
MS.gene038342.t1 | AT3G11910 | 50.000 | 152 | 70 | 2 | 14 | 165 | 30 | 175 | 4.08e-38 | 153 |
MS.gene038342.t1 | AT3G11910 | 60.219 | 274 | 107 | 2 | 164 | 436 | 526 | 798 | 7.62e-95 | 319 |
MS.gene038342.t1 | AT3G11910 | 50.000 | 152 | 70 | 2 | 14 | 165 | 30 | 175 | 4.08e-38 | 153 |
MS.gene038342.t1 | AT3G11910 | 60.219 | 274 | 107 | 2 | 164 | 436 | 527 | 799 | 7.80e-95 | 319 |
MS.gene038342.t1 | AT3G11910 | 50.000 | 152 | 70 | 2 | 14 | 165 | 31 | 176 | 4.20e-38 | 153 |
MS.gene038342.t1 | AT3G11910 | 60.219 | 274 | 107 | 2 | 164 | 436 | 527 | 799 | 7.80e-95 | 319 |
MS.gene038342.t1 | AT3G11910 | 50.000 | 152 | 70 | 2 | 14 | 165 | 31 | 176 | 4.20e-38 | 153 |
MS.gene038342.t1 | AT5G06600 | 60.584 | 274 | 105 | 3 | 164 | 436 | 529 | 800 | 7.94e-95 | 317 |
MS.gene038342.t1 | AT5G06600 | 55.479 | 146 | 57 | 2 | 27 | 165 | 33 | 177 | 6.41e-41 | 162 |
MS.gene038342.t1 | AT5G06600 | 60.584 | 274 | 105 | 3 | 164 | 436 | 529 | 800 | 3.97e-94 | 317 |
MS.gene038342.t1 | AT5G06600 | 55.479 | 146 | 57 | 2 | 27 | 165 | 33 | 177 | 5.99e-41 | 162 |
MS.gene038342.t1 | AT5G06600 | 60.584 | 274 | 105 | 3 | 164 | 436 | 528 | 799 | 4.16e-94 | 317 |
MS.gene038342.t1 | AT5G06600 | 55.479 | 146 | 57 | 2 | 27 | 165 | 32 | 176 | 6.10e-41 | 162 |
MS.gene038342.t1 | AT3G58270 | 39.259 | 135 | 74 | 2 | 43 | 170 | 8 | 141 | 2.09e-20 | 94.0 |
MS.gene038342.t1 | AT3G58270 | 39.259 | 135 | 74 | 2 | 43 | 170 | 8 | 141 | 2.09e-20 | 94.0 |
MS.gene038342.t1 | AT3G58270 | 39.259 | 135 | 74 | 2 | 43 | 170 | 8 | 141 | 2.09e-20 | 94.0 |
MS.gene038342.t1 | AT3G58370 | 39.370 | 127 | 73 | 2 | 43 | 165 | 9 | 135 | 3.41e-20 | 92.4 |
MS.gene038342.t1 | AT3G58210 | 38.129 | 139 | 82 | 2 | 34 | 171 | 2 | 137 | 4.66e-19 | 89.7 |
MS.gene038342.t1 | AT3G27040 | 34.109 | 129 | 83 | 1 | 42 | 170 | 8 | 134 | 4.75e-19 | 88.2 |
MS.gene038342.t1 | AT2G01790 | 35.915 | 142 | 82 | 2 | 46 | 178 | 11 | 152 | 5.70e-19 | 88.2 |
MS.gene038342.t1 | AT3G58250 | 37.931 | 145 | 80 | 3 | 42 | 176 | 9 | 153 | 1.56e-18 | 87.8 |
MS.gene038342.t1 | AT1G31390 | 37.398 | 123 | 75 | 1 | 38 | 158 | 3 | 125 | 1.84e-17 | 83.6 |
MS.gene038342.t1 | AT3G58410 | 36.885 | 122 | 73 | 2 | 42 | 163 | 7 | 124 | 2.64e-17 | 84.3 |
MS.gene038342.t1 | AT3G58350 | 35.156 | 128 | 79 | 2 | 42 | 165 | 7 | 134 | 2.19e-16 | 81.3 |
MS.gene038342.t1 | AT3G58350 | 35.156 | 128 | 79 | 2 | 42 | 165 | 7 | 134 | 2.19e-16 | 81.3 |
MS.gene038342.t1 | AT3G58260 | 35.115 | 131 | 82 | 2 | 44 | 171 | 9 | 139 | 1.61e-15 | 79.0 |
MS.gene038342.t1 | AT3G58410 | 31.724 | 145 | 81 | 2 | 19 | 163 | 5 | 131 | 2.64e-15 | 78.2 |
MS.gene038342.t1 | AT3G58220 | 36.232 | 138 | 75 | 5 | 39 | 169 | 7 | 138 | 3.68e-15 | 78.2 |
MS.gene038342.t1 | AT2G05410 | 37.815 | 119 | 72 | 2 | 46 | 163 | 11 | 128 | 3.73e-15 | 77.4 |
MS.gene038342.t1 | AT3G58360 | 36.170 | 141 | 85 | 2 | 40 | 176 | 5 | 144 | 4.40e-15 | 77.0 |
MS.gene038342.t1 | AT3G58220 | 36.232 | 138 | 75 | 5 | 39 | 169 | 7 | 138 | 5.10e-15 | 78.6 |
MS.gene038342.t1 | AT5G43560 | 38.776 | 98 | 59 | 1 | 46 | 143 | 73 | 169 | 5.26e-15 | 79.7 |
MS.gene038342.t1 | AT5G43560 | 38.776 | 98 | 59 | 1 | 46 | 143 | 73 | 169 | 5.26e-15 | 79.7 |
MS.gene038342.t1 | AT3G58220 | 37.500 | 136 | 70 | 6 | 39 | 165 | 7 | 136 | 8.58e-15 | 75.5 |
MS.gene038342.t1 | AT3G58220 | 37.500 | 136 | 70 | 6 | 39 | 165 | 7 | 136 | 1.31e-14 | 76.6 |
MS.gene038342.t1 | AT3G58220 | 37.500 | 136 | 70 | 6 | 39 | 165 | 7 | 136 | 1.76e-14 | 75.5 |
MS.gene038342.t1 | AT3G58340 | 29.885 | 174 | 111 | 3 | 34 | 200 | 2 | 171 | 2.60e-14 | 75.1 |
MS.gene038342.t1 | AT1G04300 | 35.644 | 101 | 64 | 1 | 43 | 143 | 69 | 168 | 3.31e-14 | 77.4 |
MS.gene038342.t1 | AT5G52330 | 33.673 | 98 | 64 | 1 | 46 | 143 | 23 | 119 | 3.39e-14 | 75.9 |
MS.gene038342.t1 | AT5G52330 | 33.673 | 98 | 64 | 1 | 46 | 143 | 23 | 119 | 3.39e-14 | 75.9 |
MS.gene038342.t1 | AT5G52330 | 33.673 | 98 | 64 | 1 | 46 | 143 | 23 | 119 | 3.39e-14 | 75.9 |
MS.gene038342.t1 | AT2G05420 | 36.301 | 146 | 81 | 4 | 42 | 176 | 8 | 152 | 3.49e-14 | 74.3 |
MS.gene038342.t1 | AT3G44790 | 31.788 | 151 | 92 | 2 | 43 | 186 | 5 | 151 | 5.21e-14 | 74.3 |
MS.gene038342.t1 | AT3G17380 | 31.098 | 164 | 92 | 3 | 38 | 180 | 16 | 179 | 7.67e-14 | 73.6 |
MS.gene038342.t1 | AT3G58340 | 31.973 | 147 | 89 | 3 | 34 | 173 | 2 | 144 | 4.42e-13 | 71.6 |
MS.gene038342.t1 | AT3G58200 | 30.702 | 114 | 79 | 0 | 43 | 156 | 8 | 121 | 6.89e-13 | 70.9 |
MS.gene038342.t1 | AT3G58240 | 29.787 | 141 | 98 | 1 | 38 | 178 | 3 | 142 | 1.12e-12 | 70.1 |
MS.gene038342.t1 | AT1G04300 | 33.945 | 109 | 63 | 2 | 43 | 143 | 69 | 176 | 1.16e-12 | 72.4 |
MS.gene038342.t1 | AT3G58290 | 32.857 | 140 | 83 | 4 | 34 | 163 | 2 | 140 | 2.68e-12 | 68.6 |
MS.gene038342.t1 | AT3G44800 | 28.049 | 164 | 114 | 1 | 43 | 202 | 5 | 168 | 1.60e-11 | 67.0 |
MS.gene038342.t1 | AT1G04300 | 35.955 | 89 | 56 | 1 | 55 | 143 | 62 | 149 | 3.87e-11 | 67.4 |
MS.gene038342.t1 | AT2G25330 | 27.778 | 126 | 81 | 3 | 45 | 163 | 49 | 171 | 6.89e-11 | 66.2 |
MS.gene038342.t1 | AT1G31400 | 32.520 | 123 | 78 | 2 | 38 | 158 | 3 | 122 | 8.34e-11 | 63.9 |
Find 118 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACAGAATTACAAGACTTTA+AGG | 0.079246 | 5.4:+72487937 | None:intergenic |
CTTAACAAGGTTAAATAATT+TGG | 0.097053 | 5.4:-72488832 | MS.gene038342:CDS |
ATCTTGCTTCTCAGAAATTT+TGG | 0.160573 | 5.4:+72487481 | None:intergenic |
TCCACAGTGTTGGCAGTTTC+AGG | 0.182689 | 5.4:+72492480 | None:intergenic |
CCTTCAATACTTCATTATTT+TGG | 0.209111 | 5.4:+72487627 | None:intergenic |
AAGACACTGCTGAACATTTA+TGG | 0.224093 | 5.4:-72491025 | MS.gene038342:CDS |
GGAGATTAGGATCCAGTTTC+CGG | 0.240907 | 5.4:+72487903 | None:intergenic |
TTTGTCAACATTCGTTTCTT+TGG | 0.241511 | 5.4:+72488132 | None:intergenic |
TACCTGTATTTGTTGTCTTA+TGG | 0.245311 | 5.4:+72493000 | None:intergenic |
CAGCTCAATTCCAGCGCTTT+TGG | 0.258793 | 5.4:-72489801 | MS.gene038342:CDS |
CCCTTTGTAGTTTATTGAAT+TGG | 0.259561 | 5.4:+72491156 | None:intergenic |
CAGCACCGACTTGTTCTAAT+TGG | 0.263642 | 5.4:+72487738 | None:intergenic |
AGAAGCTCTATTGGAACTTC+AGG | 0.268400 | 5.4:-72487325 | MS.gene038342:CDS |
CCATCACATTGTTTCCTTCT+CGG | 0.287084 | 5.4:+72492155 | None:intergenic |
TTGAAGTTGGTGGCTATAAA+TGG | 0.301769 | 5.4:-72492380 | MS.gene038342:intron |
ACTGAGTTGAAGTTAACTTT+TGG | 0.306868 | 5.4:+72487803 | None:intergenic |
TCCGGAGGTTCAAACTGAAT+TGG | 0.333471 | 5.4:-72487357 | MS.gene038342:CDS |
CCATGAATGCAGTTAGAAAA+TGG | 0.333646 | 5.4:-72488455 | MS.gene038342:intron |
ATTGTCCATTTGAATCGTTT+TGG | 0.355726 | 5.4:+72492450 | None:intergenic |
GAGAGTTGAGTTGTGTTTGT+TGG | 0.360757 | 5.4:+72487561 | None:intergenic |
TTCAAATGATTCGTCATGTT+CGG | 0.377621 | 5.4:+72488177 | None:intergenic |
AATTCCTGAAGAAGTTTCTC+AGG | 0.378200 | 5.4:+72487881 | None:intergenic |
AAAGTCATGAGAAGCTCTAT+TGG | 0.380667 | 5.4:-72487334 | MS.gene038342:CDS |
TGCAGATTCAGCTAGTTTGC+CGG | 0.380763 | 5.4:-72492107 | MS.gene038342:CDS |
CCAAAATAATGAAGTATTGA+AGG | 0.383089 | 5.4:-72487627 | MS.gene038342:CDS |
AGAGCAAAACGAAAACATTA+TGG | 0.392871 | 5.4:-72488155 | MS.gene038342:CDS |
GAAGAGGTTGCTGTTGCGTT+TGG | 0.393378 | 5.4:-72489829 | MS.gene038342:CDS |
ATCATACCTGTCGACCTTCT+CGG | 0.396694 | 5.4:-72489759 | MS.gene038342:CDS |
TCCAATTCAGTTTGAACCTC+CGG | 0.399698 | 5.4:+72487356 | None:intergenic |
TGTTCGGATTCTATGTTTGA+TGG | 0.405694 | 5.4:+72488193 | None:intergenic |
AGAAGTTTCTCAGGGAGATT+AGG | 0.408806 | 5.4:+72487890 | None:intergenic |
TCTCCCTGAGAAACTTCTTC+AGG | 0.409514 | 5.4:-72487885 | MS.gene038342:CDS |
CAATAAACTACAAAGGGATC+AGG | 0.415450 | 5.4:-72491150 | MS.gene038342:CDS |
ACAAGGAGAAGTCCGGAAAC+TGG | 0.422281 | 5.4:-72487915 | MS.gene038342:CDS |
GTATTGTTTGATCCTTCAAA+AGG | 0.422919 | 5.4:-72491101 | MS.gene038342:CDS |
CGTTAAATGATTTCTGCCTT+CGG | 0.427870 | 5.4:+72490380 | None:intergenic |
AGACACTGCTGAACATTTAT+GGG | 0.432811 | 5.4:-72491024 | MS.gene038342:intron |
GTCTTCTTCAGTAGTGCAAT+GGG | 0.435986 | 5.4:+72489049 | None:intergenic |
AGAAACTTCTTCAGGAATTG+AGG | 0.439153 | 5.4:-72487877 | MS.gene038342:CDS |
TCTAAGTATGAAGGCACATC+AGG | 0.441956 | 5.4:+72488374 | None:intergenic |
TAAAGTTCAATCTCTTCATC+AGG | 0.447128 | 5.4:+72488798 | None:intergenic |
GACAGTAGTTAATCAAATCA+AGG | 0.451433 | 5.4:-72492053 | MS.gene038342:CDS |
GAAATCATTTAACGATTTGA+AGG | 0.457389 | 5.4:-72490371 | MS.gene038342:intron |
TCAGATGTATTTGAAGTTGG+TGG | 0.458248 | 5.4:-72492390 | MS.gene038342:CDS |
TATTCAGATGTATTTGAAGT+TGG | 0.461499 | 5.4:-72492393 | MS.gene038342:CDS |
ACAAGGTTAAATAATTTGGC+TGG | 0.463059 | 5.4:-72488828 | MS.gene038342:CDS |
AAGTGTTGAAGACAAAATTC+CGG | 0.466080 | 5.4:-72487375 | MS.gene038342:CDS |
CTTTGCCAAAACGATTCAAA+TGG | 0.471471 | 5.4:-72492455 | MS.gene038342:CDS |
TGAAGAGATTGAACTTTATG+AGG | 0.473021 | 5.4:-72488793 | MS.gene038342:intron |
CAGCTAGTTTGCCGGATGGT+TGG | 0.474576 | 5.4:-72492099 | MS.gene038342:CDS |
TCTTTCACAGGCTGGATGGC+AGG | 0.474969 | 5.4:-72493074 | None:intergenic |
GAAGACCTTGCAAAACAGAT+TGG | 0.475233 | 5.4:-72490457 | MS.gene038342:CDS |
GAAACTTCTTCAGGAATTGA+GGG | 0.478362 | 5.4:-72487876 | MS.gene038342:CDS |
GATGAGTACAATTTGACAAA+AGG | 0.479974 | 5.4:-72492031 | MS.gene038342:intron |
TTCCATAAGACAACAAATAC+AGG | 0.484857 | 5.4:-72493002 | MS.gene038342:intron |
CCATTTGATGGCAGTTATGT+TGG | 0.491636 | 5.4:-72488894 | MS.gene038342:intron |
CCAATTCAATAAACTACAAA+GGG | 0.495186 | 5.4:-72491156 | MS.gene038342:CDS |
AACCTTGTTAAGATTTCTGA+TGG | 0.497935 | 5.4:+72488843 | None:intergenic |
AGCAAATACATAAATCAAAA+CGG | 0.502292 | 5.4:+72487293 | None:intergenic |
TGTCTTCTTCAGTAGTGCAA+TGG | 0.503560 | 5.4:+72489048 | None:intergenic |
TTTGATCATCAGCGAGGTGA+TGG | 0.510889 | 5.4:+72487408 | None:intergenic |
AGGAGAGGTTGAAGAAAGAC+CGG | 0.517283 | 5.4:-72490627 | MS.gene038342:CDS |
AGGCTCTTTGTGAACTGTAC+TGG | 0.518894 | 5.4:-72488870 | MS.gene038342:CDS |
GTCTGCGAAAGAAGTCTTTG+AGG | 0.518978 | 5.4:+72487583 | None:intergenic |
TTTGGAAGTGGAGCGTGGGC+TGG | 0.524148 | 5.4:-72489172 | MS.gene038342:intron |
AGAATATGTGCACAATAGCC+TGG | 0.524915 | 5.4:-72488354 | MS.gene038342:intron |
TGAAGCTCAGCAGTCAAAAG+TGG | 0.527399 | 5.4:-72488104 | MS.gene038342:CDS |
TGCACATATTCTAAGTATGA+AGG | 0.530701 | 5.4:+72488365 | None:intergenic |
TTGACACACATTGAGGAAGC+AGG | 0.534872 | 5.4:-72489733 | MS.gene038342:CDS |
AAGTCTTGTAATTCTGTACA+AGG | 0.535115 | 5.4:-72487932 | MS.gene038342:CDS |
GAAGCTCTATTGGAACTTCA+GGG | 0.537553 | 5.4:-72487324 | MS.gene038342:CDS |
TCCTCACAATGTTGTTGAGA+AGG | 0.539367 | 5.4:+72487708 | None:intergenic |
TATTGTTTGATCCTTCAAAA+GGG | 0.539919 | 5.4:-72491100 | MS.gene038342:CDS |
TTTGCCATAACCAAAAGCGC+TGG | 0.542123 | 5.4:+72489791 | None:intergenic |
GCTTCCTCAATGTGTGTCAA+AGG | 0.544090 | 5.4:+72489736 | None:intergenic |
TTGATGGCAGTTATGTTGGA+AGG | 0.545239 | 5.4:-72488890 | MS.gene038342:intron |
AAAATTAGTCAGCATAGACT+TGG | 0.549459 | 5.4:-72488035 | MS.gene038342:CDS |
TTCACAGAGTTCATACCTCA+TGG | 0.549887 | 5.4:-72491125 | MS.gene038342:CDS |
TCCAATTCAATAAACTACAA+AGG | 0.551229 | 5.4:-72491157 | MS.gene038342:CDS |
CAAAAGCGCTGGAATTGAGC+TGG | 0.551315 | 5.4:+72489802 | None:intergenic |
CGACTTGTTCTAATTGGTGA+GGG | 0.554136 | 5.4:+72487744 | None:intergenic |
CTTGTAGACCATGACAAAGT+GGG | 0.554203 | 5.4:-72490415 | MS.gene038342:CDS |
AATAAACTACAAAGGGATCA+GGG | 0.561591 | 5.4:-72491149 | MS.gene038342:CDS |
TCGGCCTTTGACACACATTG+AGG | 0.563051 | 5.4:-72489740 | MS.gene038342:CDS |
ACCTTCTCAACAACATTGTG+AGG | 0.565464 | 5.4:-72487709 | MS.gene038342:CDS |
TCTATGTTTGATGGAAACAA+AGG | 0.566299 | 5.4:+72488202 | None:intergenic |
ACACATCTACTCCAACCATC+CGG | 0.567151 | 5.4:+72492088 | None:intergenic |
ATTCTGTACAAGGAGAAGTC+CGG | 0.571012 | 5.4:-72487922 | MS.gene038342:CDS |
GCTGGTATCTTCAACATGAG+TGG | 0.585090 | 5.4:+72488072 | None:intergenic |
CAAAGGCCGAGAAGGTCGAC+AGG | 0.585558 | 5.4:+72489753 | None:intergenic |
ATGTGTGTCAAAGGCCGAGA+AGG | 0.586098 | 5.4:+72489745 | None:intergenic |
GGAGAGGTTGAAGAAAGACC+GGG | 0.588261 | 5.4:-72490626 | MS.gene038342:CDS |
ATTAACATTTCAAGAAAGTG+AGG | 0.589285 | 5.4:-72488542 | MS.gene038342:intron |
TGGCAAAGGATCCACAGTGT+TGG | 0.590836 | 5.4:+72492470 | None:intergenic |
ATTCCTGAAGAAGTTTCTCA+GGG | 0.592417 | 5.4:+72487882 | None:intergenic |
CCGACTTGTTCTAATTGGTG+AGG | 0.598392 | 5.4:+72487743 | None:intergenic |
ACAAGCTCACACATGACACT+TGG | 0.599005 | 5.4:+72488574 | None:intergenic |
GATTCAGCTAGTTTGCCGGA+TGG | 0.599038 | 5.4:-72492103 | MS.gene038342:CDS |
TTCACAGGCTGGATGGCAGG+AGG | 0.600701 | 5.4:-72493071 | None:intergenic |
AGAAAATCCCCACTTTGTCA+TGG | 0.605929 | 5.4:+72490407 | None:intergenic |
TCTTGTAGACCATGACAAAG+TGG | 0.610853 | 5.4:-72490416 | MS.gene038342:CDS |
CCGAGAAGGAAACAATGTGA+TGG | 0.614157 | 5.4:-72492155 | MS.gene038342:CDS |
AGTTAACTTCAACTCAGTCA+AGG | 0.620390 | 5.4:-72487798 | MS.gene038342:CDS |
AATACATAAATCAAAACGGA+GGG | 0.620477 | 5.4:+72487297 | None:intergenic |
CCTTGCAAAACAGATTGGAA+AGG | 0.623078 | 5.4:-72490452 | MS.gene038342:CDS |
TGTTGAAGACAAAATTCCGG+AGG | 0.652902 | 5.4:-72487372 | MS.gene038342:CDS |
GACTTGTTCTAATTGGTGAG+GGG | 0.654172 | 5.4:+72487745 | None:intergenic |
TTGTAGACCATGACAAAGTG+GGG | 0.654926 | 5.4:-72490414 | MS.gene038342:CDS |
ATGAAGGCACATCAGGATAG+CGG | 0.672277 | 5.4:+72488381 | None:intergenic |
ACCTGAAACTGCCAACACTG+TGG | 0.681026 | 5.4:-72492481 | MS.gene038342:CDS |
AATTGATGCTATGATAGATG+AGG | 0.684819 | 5.4:-72488008 | MS.gene038342:CDS |
ACTTGATTTGATCATCAGCG+AGG | 0.686094 | 5.4:+72487402 | None:intergenic |
AACCATCAGAAATCTTAACA+AGG | 0.687778 | 5.4:-72488845 | MS.gene038342:CDS |
GGATCAAACAATACACCATG+AGG | 0.690377 | 5.4:+72491110 | None:intergenic |
ATACCTTTATAAAAGCGTAG+AGG | 0.694859 | 5.4:+72490563 | None:intergenic |
CCTCACCAATTAGAACAAGT+CGG | 0.695730 | 5.4:-72487743 | MS.gene038342:CDS |
AAATACATAAATCAAAACGG+AGG | 0.718851 | 5.4:+72487296 | None:intergenic |
AGTTGAAGTACTATGCAATG+TGG | 0.739926 | 5.4:-72491054 | MS.gene038342:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACATAGTTATAAAAAAAAAA+GGG | + | chr5.4:72487409-72487428 | None:intergenic | 10.0% |
!! | ATAAAATTTAAAGAAACAAA+AGG | + | chr5.4:72490958-72490977 | None:intergenic | 10.0% |
!! | TTTATATGAAAATTTGAAAA+TGG | + | chr5.4:72487454-72487473 | None:intergenic | 10.0% |
!!! | AAATAAAAAAATATTGGTTT+AGG | + | chr5.4:72489580-72489599 | None:intergenic | 10.0% |
!! | AAAAAAAGGATAAGAATAAA+TGG | + | chr5.4:72492105-72492124 | None:intergenic | 15.0% |
!! | AAAAAAATATGACATAGTTT+CGG | + | chr5.4:72489536-72489555 | None:intergenic | 15.0% |
!! | AAAAAAGGATAAGAATAAAT+GGG | + | chr5.4:72492104-72492123 | None:intergenic | 15.0% |
!! | AGAAGCAAATAAAAAAATAT+TGG | + | chr5.4:72489586-72489605 | None:intergenic | 15.0% |
!! | GACAAACTATATTATTATTT+AGG | - | chr5.4:72491286-72491305 | MS.gene038342:intron | 15.0% |
!! | GACATAGTTATAAAAAAAAA+AGG | + | chr5.4:72487410-72487429 | None:intergenic | 15.0% |
!! | TGAAAATAAAAAACATCATA+AGG | + | chr5.4:72488166-72488185 | None:intergenic | 15.0% |
!! | TTTCTTGATTATGATTTATT+AGG | + | chr5.4:72490122-72490141 | None:intergenic | 15.0% |
!!! | ACAATTATATAGGTTTATTT+TGG | - | chr5.4:72487630-72487649 | MS.gene038342:CDS | 15.0% |
!!! | TAATAATATAGTTTGTCAAT+AGG | + | chr5.4:72491283-72491302 | None:intergenic | 15.0% |
!!! | TTTATTCTTATCCTTTTTTT+AGG | - | chr5.4:72492105-72492124 | MS.gene038342:CDS | 15.0% |
!! | AAGAACAATACTAATTTCTA+AGG | + | chr5.4:72489842-72489861 | None:intergenic | 20.0% |
!! | AATACATTTGATATCAACTA+AGG | + | chr5.4:72491451-72491470 | None:intergenic | 20.0% |
!! | AATTTAAAGAAACAAAAGGA+AGG | + | chr5.4:72490954-72490973 | None:intergenic | 20.0% |
!! | ACATTTATGTTTATGTTGAT+CGG | - | chr5.4:72490812-72490831 | MS.gene038342:intron | 20.0% |
!! | AGATATTCTTATGTACTTTA+GGG | - | chr5.4:72489370-72489389 | MS.gene038342:intron | 20.0% |
!! | ATCAACATAAACATAAATGT+GGG | + | chr5.4:72490812-72490831 | None:intergenic | 20.0% |
!! | ATGATATATTATGTAATAGC+CGG | - | chr5.4:72488069-72488088 | MS.gene038342:CDS | 20.0% |
!! | CACAGATAAATAAAAAAATC+AGG | + | chr5.4:72491612-72491631 | None:intergenic | 20.0% |
!! | CTTAACAAGGTTAAATAATT+TGG | - | chr5.4:72491534-72491553 | MS.gene038342:intron | 20.0% |
!! | GATTGAGATTACAATTATAT+AGG | - | chr5.4:72487620-72487639 | MS.gene038342:CDS | 20.0% |
!! | TAGATATTCTTATGTACTTT+AGG | - | chr5.4:72489369-72489388 | MS.gene038342:intron | 20.0% |
!! | TTCATAAAATAAAAGGGATT+TGG | - | chr5.4:72488670-72488689 | MS.gene038342:intron | 20.0% |
!! | TTGGATGTTAAACTTAAAAT+AGG | + | chr5.4:72489423-72489442 | None:intergenic | 20.0% |
!! | TTGGTTGAAAAATTTAAAGA+AGG | - | chr5.4:72492533-72492552 | MS.gene038342:intron | 20.0% |
!! | TTGTGAAATAGAATTTGATA+AGG | - | chr5.4:72489060-72489079 | MS.gene038342:CDS | 20.0% |
!! | TTTGTCATATGAATAATATG+TGG | - | chr5.4:72490391-72490410 | MS.gene038342:CDS | 20.0% |
!!! | AGTAGAATTAGAATTGTTTT+TGG | - | chr5.4:72491176-72491195 | MS.gene038342:intron | 20.0% |
!!! | ATTCCATTTTCTCTAATTTT+CGG | + | chr5.4:72490047-72490066 | None:intergenic | 20.0% |
!!! | CTGATTTTTTTATTTATCTG+TGG | - | chr5.4:72491610-72491629 | MS.gene038342:intron | 20.0% |
!!! | CTGCTAATTTAATGTTTTAT+GGG | - | chr5.4:72490856-72490875 | MS.gene038342:intron | 20.0% |
!!! | GTGTGATTTTAACATATATT+GGG | - | chr5.4:72491414-72491433 | MS.gene038342:intron | 20.0% |
!!! | GTTTGTTTTATTTACTCTAT+TGG | - | chr5.4:72488609-72488628 | MS.gene038342:intron | 20.0% |
!!! | TGCATGATATTATTTTATAC+TGG | - | chr5.4:72487554-72487573 | MS.gene038342:CDS | 20.0% |
!!! | TGTGATTTTAACATATATTG+GGG | - | chr5.4:72491415-72491434 | MS.gene038342:intron | 20.0% |
!!! | TGTGTGATTTTAACATATAT+TGG | - | chr5.4:72491413-72491432 | MS.gene038342:intron | 20.0% |
!!! | TTTATGACTTTTTTCGTTTT+TGG | - | chr5.4:72490728-72490747 | MS.gene038342:intron | 20.0% |
! | ACTTAATTCTTTATCTCTGT+CGG | - | chr5.4:72490889-72490908 | MS.gene038342:intron | 25.0% |
! | AGAGATAAAGAATTAAGTGT+TGG | + | chr5.4:72490887-72490906 | None:intergenic | 25.0% |
! | ATAAAATAAAAGGGATTTGG+TGG | - | chr5.4:72488673-72488692 | MS.gene038342:intron | 25.0% |
! | ATTAACATTTCAAGAAAGTG+AGG | - | chr5.4:72491824-72491843 | MS.gene038342:intron | 25.0% |
! | CAAAAATAAAGAAAAGACAG+TGG | - | chr5.4:72489776-72489795 | MS.gene038342:CDS | 25.0% |
! | CAAATTCTATTTCACAATGA+AGG | + | chr5.4:72489057-72489076 | None:intergenic | 25.0% |
! | CAATAGAAATTGCAAGTTAT+TGG | + | chr5.4:72489659-72489678 | None:intergenic | 25.0% |
! | CATAAAATAAGAAGCTTGAA+GGG | + | chr5.4:72490714-72490733 | None:intergenic | 25.0% |
! | CCAATTCAATAAACTACAAA+GGG | - | chr5.4:72489210-72489229 | MS.gene038342:CDS | 25.0% |
! | CCATAAAACATTAAATTAGC+AGG | + | chr5.4:72490858-72490877 | None:intergenic | 25.0% |
! | GAAATCATTTAACGATTTGA+AGG | - | chr5.4:72489995-72490014 | MS.gene038342:intron | 25.0% |
! | GAGAATACTAAATCCTAAAT+TGG | - | chr5.4:72490193-72490212 | MS.gene038342:intron | 25.0% |
! | GATCAACATAAACATAAATG+TGG | + | chr5.4:72490813-72490832 | None:intergenic | 25.0% |
! | GTGAGCAAATTAATATTGAA+AGG | + | chr5.4:72490686-72490705 | None:intergenic | 25.0% |
! | TACAGAATTACAAGACTTTA+AGG | + | chr5.4:72492432-72492451 | None:intergenic | 25.0% |
! | TATGTAATTGGTACCAATTT+AGG | + | chr5.4:72490209-72490228 | None:intergenic | 25.0% |
! | TATTGTTTGATCCTTCAAAA+GGG | - | chr5.4:72489266-72489285 | MS.gene038342:intron | 25.0% |
! | TCAAAAAATAACGAAGCATA+TGG | + | chr5.4:72491687-72491706 | None:intergenic | 25.0% |
! | TCAAATGTATTTCCATTTGA+TGG | - | chr5.4:72491460-72491479 | MS.gene038342:intron | 25.0% |
! | TCAACATAAACATAAATGTG+GGG | + | chr5.4:72490811-72490830 | None:intergenic | 25.0% |
! | TCATAAAATAAGAAGCTTGA+AGG | + | chr5.4:72490715-72490734 | None:intergenic | 25.0% |
! | TCCAATTCAATAAACTACAA+AGG | - | chr5.4:72489209-72489228 | MS.gene038342:CDS | 25.0% |
! | TGATTATGATTTATTAGGCT+AGG | + | chr5.4:72490117-72490136 | None:intergenic | 25.0% |
! | TGATTTCTAATATGTGATCT+AGG | - | chr5.4:72490515-72490534 | MS.gene038342:intron | 25.0% |
! | TTAATTGCTCGATACTTATT+AGG | - | chr5.4:72489875-72489894 | MS.gene038342:intron | 25.0% |
! | TTACTTTAAGTATGTAGCAT+TGG | - | chr5.4:72491726-72491745 | MS.gene038342:intron | 25.0% |
! | TTATTTACTCTATTGGAATC+TGG | - | chr5.4:72488616-72488635 | MS.gene038342:intron | 25.0% |
! | TTCAAGATAAGCCTAAAAAA+AGG | + | chr5.4:72492119-72492138 | None:intergenic | 25.0% |
! | TTTAACATATATTGGGGTAA+AGG | - | chr5.4:72491421-72491440 | MS.gene038342:intron | 25.0% |
! | TTTGAAAAAAGAACAAGACT+CGG | - | chr5.4:72492700-72492719 | MS.gene038342:intron | 25.0% |
!! | ACAATACTAATTTCTAAGGA+AGG | + | chr5.4:72489838-72489857 | None:intergenic | 25.0% |
!! | ATACTCTTTTGTCTTAATTC+TGG | + | chr5.4:72488432-72488451 | None:intergenic | 25.0% |
!! | CCTGCTAATTTAATGTTTTA+TGG | - | chr5.4:72490855-72490874 | MS.gene038342:intron | 25.0% |
!! | CCTTCAATACTTCATTATTT+TGG | + | chr5.4:72492742-72492761 | None:intergenic | 25.0% |
!! | GAGTGTTGTAAATATGTAAT+TGG | + | chr5.4:72490221-72490240 | None:intergenic | 25.0% |
!! | TATTCAGATGTATTTGAAGT+TGG | - | chr5.4:72487973-72487992 | MS.gene038342:CDS | 25.0% |
!! | TGGAAATGCACATAATTTTT+GGG | - | chr5.4:72489136-72489155 | MS.gene038342:intron | 25.0% |
!! | TTCATTTTGAATCAAACTGT+AGG | - | chr5.4:72491119-72491138 | MS.gene038342:CDS | 25.0% |
!!! | ATTAGAATTGTTTTTGGAAG+TGG | - | chr5.4:72491182-72491201 | MS.gene038342:intron | 25.0% |
!!! | CCAAAATAATGAAGTATTGA+AGG | - | chr5.4:72492739-72492758 | MS.gene038342:intron | 25.0% |
!!! | TTTATTTTGGTATACGAATC+AGG | - | chr5.4:72487643-72487662 | MS.gene038342:CDS | 25.0% |
!!! | TTTTTATTTTCACTATGAGC+AGG | - | chr5.4:72488174-72488193 | MS.gene038342:CDS | 25.0% |
!!! | TTTTTTCGTTTTTGGCTTTT+AGG | - | chr5.4:72490736-72490755 | MS.gene038342:intron | 25.0% |
AAAATTAGTCAGCATAGACT+TGG | - | chr5.4:72492331-72492350 | MS.gene038342:intron | 30.0% | |
AAACCACAAAAAGAAATACC+AGG | + | chr5.4:72492033-72492052 | None:intergenic | 30.0% | |
AACATCCAAACAAATTCAGA+GGG | - | chr5.4:72489434-72489453 | MS.gene038342:intron | 30.0% | |
AACCATCAGAAATCTTAACA+AGG | - | chr5.4:72491521-72491540 | MS.gene038342:intron | 30.0% | |
AACCTTGTTAAGATTTCTGA+TGG | + | chr5.4:72491526-72491545 | None:intergenic | 30.0% | |
AATAAACTACAAAGGGATCA+GGG | - | chr5.4:72489217-72489236 | MS.gene038342:CDS | 30.0% | |
AATGAAGGATTTCAGAGAAT+AGG | + | chr5.4:72489042-72489061 | None:intergenic | 30.0% | |
AATTGATGCTATGATAGATG+AGG | - | chr5.4:72492358-72492377 | MS.gene038342:intron | 30.0% | |
AATTGCAAGTTATTGGCAAA+CGG | + | chr5.4:72489652-72489671 | None:intergenic | 30.0% | |
ACAAGGTTAAATAATTTGGC+TGG | - | chr5.4:72491538-72491557 | MS.gene038342:intron | 30.0% | |
ACTGGTAATATGTAACTCAA+AGG | - | chr5.4:72487572-72487591 | MS.gene038342:CDS | 30.0% | |
ACTTAAAATAGGTTTCTACC+TGG | + | chr5.4:72489412-72489431 | None:intergenic | 30.0% | |
AGAAAAGGAAACTAACAATG+AGG | + | chr5.4:72488934-72488953 | None:intergenic | 30.0% | |
AGAGCAAAACGAAAACATTA+TGG | - | chr5.4:72492211-72492230 | MS.gene038342:intron | 30.0% | |
ATGAAAGAGGAAAAGAAATG+TGG | - | chr5.4:72489116-72489135 | MS.gene038342:intron | 30.0% | |
CAACATAAACATAAATGTGG+GGG | + | chr5.4:72490810-72490829 | None:intergenic | 30.0% | |
CATAGATCTGATGAATTTAC+TGG | + | chr5.4:72490660-72490679 | None:intergenic | 30.0% | |
CCCTTTGTAGTTTATTGAAT+TGG | + | chr5.4:72489213-72489232 | None:intergenic | 30.0% | |
CGGTTACAAGGATTAAATAT+AGG | + | chr5.4:72488991-72489010 | None:intergenic | 30.0% | |
CTACCGAAAATTAGAGAAAA+TGG | - | chr5.4:72490041-72490060 | MS.gene038342:intron | 30.0% | |
CTTATATGTCACAATTGGAT+TGG | + | chr5.4:72488743-72488762 | None:intergenic | 30.0% | |
GACAGTAGTTAATCAAATCA+AGG | - | chr5.4:72488313-72488332 | MS.gene038342:intron | 30.0% | |
GATGAGTACAATTTGACAAA+AGG | - | chr5.4:72488335-72488354 | MS.gene038342:intron | 30.0% | |
GTATTGTTTGATCCTTCAAA+AGG | - | chr5.4:72489265-72489284 | MS.gene038342:intron | 30.0% | |
GTTATATGATCCTGAAAAAG+AGG | - | chr5.4:72491367-72491386 | MS.gene038342:intron | 30.0% | |
TAAAGTTCAATCTCTTCATC+AGG | + | chr5.4:72491571-72491590 | None:intergenic | 30.0% | |
TAACATCCAAACAAATTCAG+AGG | - | chr5.4:72489433-72489452 | MS.gene038342:intron | 30.0% | |
TACAAGGAACAAACTGAATA+GGG | + | chr5.4:72488363-72488382 | None:intergenic | 30.0% | |
TCTATGTTTGATGGAAACAA+AGG | + | chr5.4:72492167-72492186 | None:intergenic | 30.0% | |
TGAAGAGATTGAACTTTATG+AGG | - | chr5.4:72491573-72491592 | MS.gene038342:intron | 30.0% | |
TGCAAGGATAATAATATGCA+GGG | + | chr5.4:72488557-72488576 | None:intergenic | 30.0% | |
TGCACATATTCTAAGTATGA+AGG | + | chr5.4:72492004-72492023 | None:intergenic | 30.0% | |
TTAAATTTGTAGTGTGTCCT+TGG | - | chr5.4:72491650-72491669 | MS.gene038342:intron | 30.0% | |
TTAATTTCCTGCACAACAAT+AGG | + | chr5.4:72491765-72491784 | None:intergenic | 30.0% | |
TTCAAATGATTCGTCATGTT+CGG | + | chr5.4:72492192-72492211 | None:intergenic | 30.0% | |
TTCCATAAGACAACAAATAC+AGG | - | chr5.4:72487364-72487383 | MS.gene038342:CDS | 30.0% | |
TTGAACTTAATTCCTTGTTC+AGG | - | chr5.4:72492139-72492158 | MS.gene038342:CDS | 30.0% | |
TTTGTCAACATTCGTTTCTT+TGG | + | chr5.4:72492237-72492256 | None:intergenic | 30.0% | |
! | AAGTCTTGTAATTCTGTACA+AGG | - | chr5.4:72492434-72492453 | MS.gene038342:CDS | 30.0% |
! | AATTTAATGTTTTATGGGCC+AGG | - | chr5.4:72490861-72490880 | MS.gene038342:intron | 30.0% |
! | ATACCTTTATAAAAGCGTAG+AGG | + | chr5.4:72489806-72489825 | None:intergenic | 30.0% |
! | ATATACACATGGTTTTCGTA+TGG | - | chr5.4:72490992-72491011 | MS.gene038342:intron | 30.0% |
! | ATCTTGCTTCTCAGAAATTT+TGG | + | chr5.4:72492888-72492907 | None:intergenic | 30.0% |
! | ATGGACTATCTAGTTCAAAT+AGG | + | chr5.4:72487435-72487454 | None:intergenic | 30.0% |
! | ATTCTCATGGATTGAAAAGA+CGG | + | chr5.4:72489011-72489030 | None:intergenic | 30.0% |
! | ATTGGCTTATATGTCACAAT+TGG | + | chr5.4:72488748-72488767 | None:intergenic | 30.0% |
! | ATTGTCCATTTGAATCGTTT+TGG | + | chr5.4:72487919-72487938 | None:intergenic | 30.0% |
! | GTGGAAATGCACATAATTTT+TGG | - | chr5.4:72489135-72489154 | MS.gene038342:intron | 30.0% |
! | TAAAAGCATGATGCTTTAGT+TGG | - | chr5.4:72490352-72490371 | MS.gene038342:intron | 30.0% |
! | TTCCTCTTTCATTTTGTTCT+CGG | + | chr5.4:72489108-72489127 | None:intergenic | 30.0% |
! | TTTTGAATCAAACTGTAGGT+TGG | - | chr5.4:72491123-72491142 | MS.gene038342:CDS | 30.0% |
! | TTTTGTGTTCTTTTACTTCC+CGG | + | chr5.4:72489761-72489780 | None:intergenic | 30.0% |
!! | AAGTGTTGAAGACAAAATTC+CGG | - | chr5.4:72492991-72493010 | MS.gene038342:intron | 30.0% |
!! | ACTGAGTTGAAGTTAACTTT+TGG | + | chr5.4:72492566-72492585 | None:intergenic | 30.0% |
!! | ACTTTAAGTGTTGAGAAGTT+GGG | - | chr5.4:72488509-72488528 | MS.gene038342:intron | 30.0% |
!! | ATGAACATCATGAGTTGATT+TGG | + | chr5.4:72488031-72488050 | None:intergenic | 30.0% |
!! | ATTGAGGGATATTGCTTTTA+AGG | - | chr5.4:72492505-72492524 | MS.gene038342:intron | 30.0% |
!! | TACCTGGCTTGATTTATTTT+GGG | + | chr5.4:72489396-72489415 | None:intergenic | 30.0% |
!! | TACCTGTATTTGTTGTCTTA+TGG | + | chr5.4:72487369-72487388 | None:intergenic | 30.0% |
!! | TGAACATCATGAGTTGATTT+GGG | + | chr5.4:72488030-72488049 | None:intergenic | 30.0% |
!!! | CTTTTTCTGTTGGTTTATTC+TGG | - | chr5.4:72489681-72489700 | MS.gene038342:intron | 30.0% |
!!! | GCTGACTAATTTTAAAGTGT+TGG | + | chr5.4:72492324-72492343 | None:intergenic | 30.0% |
!!! | TTCTATTGCACTTTTTCTGT+TGG | - | chr5.4:72489671-72489690 | MS.gene038342:intron | 30.0% |
!!! | TTTTAAAGTGTTGGATTTGC+TGG | + | chr5.4:72492315-72492334 | None:intergenic | 30.0% |
AAAAAAGCTACAAGGTGACA+GGG | - | chr5.4:72492862-72492881 | MS.gene038342:intron | 35.0% | |
AAAAGGAAGGTAGTCAAAGA+TGG | + | chr5.4:72490941-72490960 | None:intergenic | 35.0% | |
AAAGTCATGAGAAGCTCTAT+TGG | - | chr5.4:72493032-72493051 | MS.gene038342:CDS | 35.0% | |
AACATATATTGGGGTAAAGG+TGG | - | chr5.4:72491424-72491443 | MS.gene038342:intron | 35.0% | |
AAGAAGAAATACACGAGTGA+TGG | - | chr5.4:72490292-72490311 | MS.gene038342:intron | 35.0% | |
AAGACACTGCTGAACATTTA+TGG | - | chr5.4:72489341-72489360 | MS.gene038342:intron | 35.0% | |
AATGCTTAGTCATGCAGTTT+AGG | + | chr5.4:72487731-72487750 | None:intergenic | 35.0% | |
AATTCCTGAAGAAGTTTCTC+AGG | + | chr5.4:72492488-72492507 | None:intergenic | 35.0% | |
AATTGAATTGGCCAATGTCA+CGG | - | chr5.4:72488858-72488877 | MS.gene038342:CDS | 35.0% | |
ACCATGCATGTATGTTGAAA+AGG | - | chr5.4:72488400-72488419 | MS.gene038342:CDS | 35.0% | |
AGAAACTTCTTCAGGAATTG+AGG | - | chr5.4:72492489-72492508 | MS.gene038342:CDS | 35.0% | |
AGACACTGCTGAACATTTAT+GGG | - | chr5.4:72489342-72489361 | MS.gene038342:intron | 35.0% | |
AGATCTGTCATGATAATCAC+AGG | - | chr5.4:72490152-72490171 | MS.gene038342:intron | 35.0% | |
AGTATCAACGTATTGTCTCA+AGG | + | chr5.4:72487490-72487509 | None:intergenic | 35.0% | |
AGTTAACTTCAACTCAGTCA+AGG | - | chr5.4:72492568-72492587 | MS.gene038342:intron | 35.0% | |
ATATGGCTTATGAACTTCCA+AGG | + | chr5.4:72491670-72491689 | None:intergenic | 35.0% | |
ATTCCTGAAGAAGTTTCTCA+GGG | + | chr5.4:72492487-72492506 | None:intergenic | 35.0% | |
ATTGCTCGATACTTATTAGG+TGG | - | chr5.4:72489878-72489897 | MS.gene038342:intron | 35.0% | |
CAATAAACTACAAAGGGATC+AGG | - | chr5.4:72489216-72489235 | MS.gene038342:CDS | 35.0% | |
CCATGAATGCAGTTAGAAAA+TGG | - | chr5.4:72491911-72491930 | MS.gene038342:intron | 35.0% | |
CGTTAAATGATTTCTGCCTT+CGG | + | chr5.4:72489989-72490008 | None:intergenic | 35.0% | |
CTAATATGTGATCTAGGAAG+AGG | - | chr5.4:72490521-72490540 | MS.gene038342:intron | 35.0% | |
CTACAAGGAACAAACTGAAT+AGG | + | chr5.4:72488364-72488383 | None:intergenic | 35.0% | |
CTGCAAGGATAATAATATGC+AGG | + | chr5.4:72488558-72488577 | None:intergenic | 35.0% | |
CTTTGCCAAAACGATTCAAA+TGG | - | chr5.4:72487911-72487930 | MS.gene038342:CDS | 35.0% | |
GAAACTAACAATGAGGAAAG+TGG | + | chr5.4:72488927-72488946 | None:intergenic | 35.0% | |
GAAACTTCTTCAGGAATTGA+GGG | - | chr5.4:72492490-72492509 | MS.gene038342:CDS | 35.0% | |
GAGATTGAACTTTATGAGGT+TGG | - | chr5.4:72491577-72491596 | MS.gene038342:intron | 35.0% | |
GCAAGGATAATAATATGCAG+GGG | + | chr5.4:72488556-72488575 | None:intergenic | 35.0% | |
GCATATGCAACATATACACA+TGG | - | chr5.4:72490981-72491000 | MS.gene038342:intron | 35.0% | |
GGTAACATAACTACCAAAAC+TGG | + | chr5.4:72488906-72488925 | None:intergenic | 35.0% | |
GTTCGTTTGTAACAACTACA+AGG | + | chr5.4:72488379-72488398 | None:intergenic | 35.0% | |
GTTTAGGCAGAGTTCAAATT+TGG | + | chr5.4:72489564-72489583 | None:intergenic | 35.0% | |
TAAAAAAGCTACAAGGTGAC+AGG | - | chr5.4:72492861-72492880 | MS.gene038342:intron | 35.0% | |
TCGAAGTTCAAGAACCTAAT+CGG | + | chr5.4:72487698-72487717 | None:intergenic | 35.0% | |
TGGAAAATCTGCACTGAATT+TGG | - | chr5.4:72489701-72489720 | MS.gene038342:intron | 35.0% | |
TGGAATCTGGCGTATTAATA+TGG | - | chr5.4:72488629-72488648 | MS.gene038342:intron | 35.0% | |
TGTTCGGATTCTATGTTTGA+TGG | + | chr5.4:72492176-72492195 | None:intergenic | 35.0% | |
TTGAATCTTCTGATCTCTAC+TGG | - | chr5.4:72491703-72491722 | MS.gene038342:intron | 35.0% | |
TTGAGACAATACGTTGATAC+TGG | - | chr5.4:72487489-72487508 | MS.gene038342:CDS | 35.0% | |
! | AGTTGAAGTACTATGCAATG+TGG | - | chr5.4:72489312-72489331 | MS.gene038342:intron | 35.0% |
! | CCATTTTCTAACTGCATTCA+TGG | + | chr5.4:72491914-72491933 | None:intergenic | 35.0% |
! | GGACAATTGACAGATTTTCT+CGG | - | chr5.4:72487932-72487951 | MS.gene038342:CDS | 35.0% |
! | TAGCCTGGTATTTCTTTTTG+TGG | - | chr5.4:72492027-72492046 | MS.gene038342:intron | 35.0% |
! | TCACCTCTACGCTTTTATAA+AGG | - | chr5.4:72489800-72489819 | MS.gene038342:CDS | 35.0% |
! | TCAGATGTATTTGAAGTTGG+TGG | - | chr5.4:72487976-72487995 | MS.gene038342:CDS | 35.0% |
! | TCCAGTTGATTAGCTGAATA+TGG | + | chr5.4:72489500-72489519 | None:intergenic | 35.0% |
! | TCCTTTTCAACATACATGCA+TGG | + | chr5.4:72488404-72488423 | None:intergenic | 35.0% |
! | TTCACAAGATACCCTTTTGA+AGG | + | chr5.4:72489280-72489299 | None:intergenic | 35.0% |
!! | AACGGAGCATGGTTTAATTT+TGG | + | chr5.4:72489634-72489653 | None:intergenic | 35.0% |
!! | ATAGGAGTATTGCATTCTCA+TGG | + | chr5.4:72489024-72489043 | None:intergenic | 35.0% |
!! | ATCGACAGAGTTTTATCAGA+AGG | - | chr5.4:72492395-72492414 | MS.gene038342:CDS | 35.0% |
!! | CACTTTAAGTGTTGAGAAGT+TGG | - | chr5.4:72488508-72488527 | MS.gene038342:intron | 35.0% |
!! | CATTTGAATCGTTTTGGCAA+AGG | + | chr5.4:72487913-72487932 | None:intergenic | 35.0% |
!! | CTACCTGGCTTGATTTATTT+TGG | + | chr5.4:72489397-72489416 | None:intergenic | 35.0% |
!! | GAACATCATGAGTTGATTTG+GGG | + | chr5.4:72488029-72488048 | None:intergenic | 35.0% |
!! | GGAAGTGATTTTGTTGTAGT+TGG | - | chr5.4:72488106-72488125 | MS.gene038342:CDS | 35.0% |
!! | TAAAGAATTAAGTGTTGGCC+TGG | + | chr5.4:72490882-72490901 | None:intergenic | 35.0% |
!! | TATTGCTTTTAAGGAGGACT+TGG | - | chr5.4:72492514-72492533 | MS.gene038342:intron | 35.0% |
!! | TCGACAGAGTTTTATCAGAA+GGG | - | chr5.4:72492396-72492415 | MS.gene038342:CDS | 35.0% |
!! | TTGAAGTTGGTGGCTATAAA+TGG | - | chr5.4:72487986-72488005 | MS.gene038342:CDS | 35.0% |
!!! | ACCTTGTAGCTTTTTTAGCT+TGG | + | chr5.4:72492858-72492877 | None:intergenic | 35.0% |
!!! | AGTTTCCTTTTCTAGTTCCT+AGG | - | chr5.4:72488941-72488960 | MS.gene038342:intron | 35.0% |
!!! | GTTTCCTTTTCTAGTTCCTA+GGG | - | chr5.4:72488942-72488961 | MS.gene038342:intron | 35.0% |
!!! | TGGGAATAGCAGTGTTATTT+TGG | - | chr5.4:72489155-72489174 | MS.gene038342:intron | 35.0% |
AACTAGCTGAAAACTTGGAG+AGG | + | chr5.4:72487806-72487825 | None:intergenic | 40.0% | |
ACACCACTTGTGTACCATTA+AGG | - | chr5.4:72488696-72488715 | MS.gene038342:intron | 40.0% | |
ACCTTCTCAACAACATTGTG+AGG | - | chr5.4:72492657-72492676 | MS.gene038342:intron | 40.0% | |
ACTCGTGTATTTCTTCTTCC+AGG | + | chr5.4:72490290-72490309 | None:intergenic | 40.0% | |
AGAAAATCCCCACTTTGTCA+TGG | + | chr5.4:72489962-72489981 | None:intergenic | 40.0% | |
AGAAGCTCTATTGGAACTTC+AGG | - | chr5.4:72493041-72493060 | MS.gene038342:CDS | 40.0% | |
AGAAGTTTCTCAGGGAGATT+AGG | + | chr5.4:72492479-72492498 | None:intergenic | 40.0% | |
AGAATATGTGCACAATAGCC+TGG | - | chr5.4:72492012-72492031 | MS.gene038342:intron | 40.0% | |
ATAATAATATGCAGGGGTCG+GGG | + | chr5.4:72488550-72488569 | None:intergenic | 40.0% | |
ATCACCCTAGGAACTAGAAA+AGG | + | chr5.4:72488949-72488968 | None:intergenic | 40.0% | |
ATCCTGAAAAAGAGGAGCTA+CGG | - | chr5.4:72491375-72491394 | MS.gene038342:intron | 40.0% | |
ATTCTGTACAAGGAGAAGTC+CGG | - | chr5.4:72492444-72492463 | MS.gene038342:CDS | 40.0% | |
CATGTGACATTCCACCTTAA+TGG | + | chr5.4:72488713-72488732 | None:intergenic | 40.0% | |
CCAACATAACTGCCATCAAA+TGG | + | chr5.4:72491475-72491494 | None:intergenic | 40.0% | |
CCATCACATTGTTTCCTTCT+CGG | + | chr5.4:72488214-72488233 | None:intergenic | 40.0% | |
CCTCACCAATTAGAACAAGT+CGG | - | chr5.4:72492623-72492642 | MS.gene038342:intron | 40.0% | |
CCTTGCAAAACAGATTGGAA+AGG | - | chr5.4:72489914-72489933 | MS.gene038342:intron | 40.0% | |
CTCCGAGAACAAAATGAAAG+AGG | - | chr5.4:72489103-72489122 | MS.gene038342:intron | 40.0% | |
CTTGTAGACCATGACAAAGT+GGG | - | chr5.4:72489951-72489970 | MS.gene038342:intron | 40.0% | |
GAAACAAAGGAACCTGAACA+AGG | + | chr5.4:72492154-72492173 | None:intergenic | 40.0% | |
GAAGACCTTGCAAAACAGAT+TGG | - | chr5.4:72489909-72489928 | MS.gene038342:intron | 40.0% | |
GAAGCTCTATTGGAACTTCA+GGG | - | chr5.4:72493042-72493061 | MS.gene038342:CDS | 40.0% | |
GAGAGAGAGAGTAGTTGAAT+TGG | + | chr5.4:72488766-72488785 | None:intergenic | 40.0% | |
GATAATAATATGCAGGGGTC+GGG | + | chr5.4:72488551-72488570 | None:intergenic | 40.0% | |
GCCAAGCTAAAAAAGCTACA+AGG | - | chr5.4:72492854-72492873 | MS.gene038342:intron | 40.0% | |
GCCATATTCAGCTAATCAAC+TGG | - | chr5.4:72489496-72489515 | MS.gene038342:intron | 40.0% | |
GGATAATAATATGCAGGGGT+CGG | + | chr5.4:72488552-72488571 | None:intergenic | 40.0% | |
GGATCAAACAATACACCATG+AGG | + | chr5.4:72489259-72489278 | None:intergenic | 40.0% | |
GGATTGAAAAGACGGTTACA+AGG | + | chr5.4:72489003-72489022 | None:intergenic | 40.0% | |
GTCTTCTTCAGTAGTGCAAT+GGG | + | chr5.4:72491320-72491339 | None:intergenic | 40.0% | |
TAGACTTAGTGAGCATCAAC+TGG | + | chr5.4:72491862-72491881 | None:intergenic | 40.0% | |
TCCAATTCAGTTTGAACCTC+CGG | + | chr5.4:72493013-72493032 | None:intergenic | 40.0% | |
TCCTCACAATGTTGTTGAGA+AGG | + | chr5.4:72492661-72492680 | None:intergenic | 40.0% | |
TCTGCACTGAATTTGGACAA+CGG | - | chr5.4:72489708-72489727 | MS.gene038342:intron | 40.0% | |
TCTTGTAGACCATGACAAAG+TGG | - | chr5.4:72489950-72489969 | MS.gene038342:intron | 40.0% | |
TGTCTTCTTCAGTAGTGCAA+TGG | + | chr5.4:72491321-72491340 | None:intergenic | 40.0% | |
TGTTGAAGACAAAATTCCGG+AGG | - | chr5.4:72492994-72493013 | MS.gene038342:intron | 40.0% | |
TTCACAGAGTTCATACCTCA+TGG | - | chr5.4:72489241-72489260 | MS.gene038342:intron | 40.0% | |
TTGTAGACCATGACAAAGTG+GGG | - | chr5.4:72489952-72489971 | MS.gene038342:intron | 40.0% | |
! | AATACACGAGTGATGGAAGT+TGG | - | chr5.4:72490299-72490318 | MS.gene038342:intron | 40.0% |
! | ACACAAGTGCAATCCAGTTT+TGG | - | chr5.4:72488890-72488909 | MS.gene038342:intron | 40.0% |
! | ACTTGATTTGATCATCAGCG+AGG | + | chr5.4:72492967-72492986 | None:intergenic | 40.0% |
! | ATACACGAGTGATGGAAGTT+GGG | - | chr5.4:72490300-72490319 | MS.gene038342:intron | 40.0% |
! | CCAAGTTTTCAGCTAGTTCA+CGG | - | chr5.4:72487808-72487827 | MS.gene038342:CDS | 40.0% |
! | CCATTTGATGGCAGTTATGT+TGG | - | chr5.4:72491472-72491491 | MS.gene038342:intron | 40.0% |
! | CCTTTCCAATCTGTTTTGCA+AGG | + | chr5.4:72489917-72489936 | None:intergenic | 40.0% |
! | CGACTTGTTCTAATTGGTGA+GGG | + | chr5.4:72492625-72492644 | None:intergenic | 40.0% |
! | GACTTGTTCTAATTGGTGAG+GGG | + | chr5.4:72492624-72492643 | None:intergenic | 40.0% |
! | GAGAGTTGAGTTGTGTTTGT+TGG | + | chr5.4:72492808-72492827 | None:intergenic | 40.0% |
! | GTTAGCCCTCTGAATTTGTT+TGG | + | chr5.4:72489442-72489461 | None:intergenic | 40.0% |
! | TCTAAGTATGAAGGCACATC+AGG | + | chr5.4:72491995-72492014 | None:intergenic | 40.0% |
! | TTGATGGCAGTTATGTTGGA+AGG | - | chr5.4:72491476-72491495 | MS.gene038342:intron | 40.0% |
! | TTTTTGCTCAAGTAGCCTAC+TGG | - | chr5.4:72488474-72488493 | MS.gene038342:intron | 40.0% |
!! | AATTCCAGCGCTTTTGGTTA+TGG | - | chr5.4:72490571-72490590 | MS.gene038342:CDS | 40.0% |
!! | CGTGTACTTATTTTCCGAGA+AGG | - | chr5.4:72488197-72488216 | MS.gene038342:CDS | 40.0% |
!! | GAGGGATATTGCTTTTAAGG+AGG | - | chr5.4:72492508-72492527 | MS.gene038342:intron | 40.0% |
!! | GGTTTTCGTATGGAGTGTTT+TGG | - | chr5.4:72491002-72491021 | MS.gene038342:intron | 40.0% |
AATCGTGCCTATTGTTGTGC+AGG | - | chr5.4:72491755-72491774 | MS.gene038342:intron | 45.0% | |
ACAAGCTCACACATGACACT+TGG | + | chr5.4:72491795-72491814 | None:intergenic | 45.0% | |
ACACATCTACTCCAACCATC+CGG | + | chr5.4:72488281-72488300 | None:intergenic | 45.0% | |
ACATTGTCTCGCTGCATTGT+AGG | - | chr5.4:72487761-72487780 | MS.gene038342:CDS | 45.0% | |
AGGAGAGGTTGAAGAAAGAC+CGG | - | chr5.4:72489739-72489758 | MS.gene038342:CDS | 45.0% | |
AGGCTCTTTGTGAACTGTAC+TGG | - | chr5.4:72491496-72491515 | MS.gene038342:intron | 45.0% | |
AGTTATTGGCAAACGGAGCA+TGG | + | chr5.4:72489645-72489664 | None:intergenic | 45.0% | |
ATCATACCTGTCGACCTTCT+CGG | - | chr5.4:72490607-72490626 | MS.gene038342:CDS | 45.0% | |
CAGTGACAGATACTCCGATT+AGG | - | chr5.4:72487681-72487700 | MS.gene038342:CDS | 45.0% | |
CCACCTTAATGGTACACAAG+TGG | + | chr5.4:72488702-72488721 | None:intergenic | 45.0% | |
CCACTTGTGTACCATTAAGG+TGG | - | chr5.4:72488699-72488718 | MS.gene038342:intron | 45.0% | |
CCGAGAAGGAAACAATGTGA+TGG | - | chr5.4:72488211-72488230 | MS.gene038342:intron | 45.0% | |
CCGTGAACTAGCTGAAAACT+TGG | + | chr5.4:72487811-72487830 | None:intergenic | 45.0% | |
CTGCACTGAATTTGGACAAC+GGG | - | chr5.4:72489709-72489728 | MS.gene038342:intron | 45.0% | |
CTTCCCACAATAGATAGAGC+CGG | + | chr5.4:72488091-72488110 | None:intergenic | 45.0% | |
GCCAATTCAATTGTGACACG+TGG | + | chr5.4:72488850-72488869 | None:intergenic | 45.0% | |
GCCACGTGTCACAATTGAAT+TGG | - | chr5.4:72488846-72488865 | MS.gene038342:CDS | 45.0% | |
GCTGGTATCTTCAACATGAG+TGG | + | chr5.4:72492297-72492316 | None:intergenic | 45.0% | |
GCTTCCTCAATGTGTGTCAA+AGG | + | chr5.4:72490633-72490652 | None:intergenic | 45.0% | |
GGAGATTAGGATCCAGTTTC+CGG | + | chr5.4:72492466-72492485 | None:intergenic | 45.0% | |
GGCCCAAAATAAATCAAGCC+AGG | - | chr5.4:72489391-72489410 | MS.gene038342:intron | 45.0% | |
GGTGGAATGTCACATGACAT+TGG | - | chr5.4:72488717-72488736 | MS.gene038342:intron | 45.0% | |
GTCTGCGAAAGAAGTCTTTG+AGG | + | chr5.4:72492786-72492805 | None:intergenic | 45.0% | |
GTGACATAATGCCGTGACAT+TGG | + | chr5.4:72488872-72488891 | None:intergenic | 45.0% | |
TCCGGAGGTTCAAACTGAAT+TGG | - | chr5.4:72493009-72493028 | MS.gene038342:CDS | 45.0% | |
TCTCCCTGAGAAACTTCTTC+AGG | - | chr5.4:72492481-72492500 | MS.gene038342:CDS | 45.0% | |
TGAAGCTCAGCAGTCAAAAG+TGG | - | chr5.4:72492262-72492281 | MS.gene038342:intron | 45.0% | |
TTGACACACATTGAGGAAGC+AGG | - | chr5.4:72490633-72490652 | MS.gene038342:intron | 45.0% | |
TTTGATCATCAGCGAGGTGA+TGG | + | chr5.4:72492961-72492980 | None:intergenic | 45.0% | |
TTTGGACAACGGGATTATGC+AGG | - | chr5.4:72489719-72489738 | MS.gene038342:intron | 45.0% | |
! | ATAGCCGGCTCTATCTATTG+TGG | - | chr5.4:72488084-72488103 | MS.gene038342:CDS | 45.0% |
! | ATGAAGGCACATCAGGATAG+CGG | + | chr5.4:72491988-72492007 | None:intergenic | 45.0% |
! | CCGACTTGTTCTAATTGGTG+AGG | + | chr5.4:72492626-72492645 | None:intergenic | 45.0% |
! | TACCGTAGCTCCTCTTTTTC+AGG | + | chr5.4:72491380-72491399 | None:intergenic | 45.0% |
! | TAGCCGGCTCTATCTATTGT+GGG | - | chr5.4:72488085-72488104 | MS.gene038342:CDS | 45.0% |
! | TCTAGTTCCTAGGGTGATAG+TGG | - | chr5.4:72488951-72488970 | MS.gene038342:intron | 45.0% |
! | TGCAGATTCAGCTAGTTTGC+CGG | - | chr5.4:72488259-72488278 | MS.gene038342:intron | 45.0% |
! | TGGGGATTTTCTATGTCCGA+AGG | - | chr5.4:72489970-72489989 | MS.gene038342:intron | 45.0% |
! | TTTGCCATAACCAAAAGCGC+TGG | + | chr5.4:72490578-72490597 | None:intergenic | 45.0% |
!! | CAGCACCGACTTGTTCTAAT+TGG | + | chr5.4:72492631-72492650 | None:intergenic | 45.0% |
!!! | TGTTTTTGGAAGTGGAGCGT+GGG | - | chr5.4:72491190-72491209 | MS.gene038342:intron | 45.0% |
!!! | TTGTTTTTGGAAGTGGAGCG+TGG | - | chr5.4:72491189-72491208 | MS.gene038342:intron | 45.0% |
!!! | TATTTTTTCATAAAATAAAA+GGG | - | chr5.4:72488664-72488683 | MS.gene038342:intron | 5.0% |
!!! | TTATTTTTTCATAAAATAAA+AGG | - | chr5.4:72488663-72488682 | MS.gene038342:intron | 5.0% |
ACAACGGGATTATGCAGGAG+AGG | - | chr5.4:72489724-72489743 | MS.gene038342:intron | 50.0% | |
ACAAGGAGAAGTCCGGAAAC+TGG | - | chr5.4:72492451-72492470 | MS.gene038342:CDS | 50.0% | |
ACCTGAAACTGCCAACACTG+TGG | - | chr5.4:72487885-72487904 | MS.gene038342:CDS | 50.0% | |
ACTCCGCTCAATCAAGTGAC+TGG | - | chr5.4:72490237-72490256 | MS.gene038342:intron | 50.0% | |
AGTGTGTTTGTCCAGCCAGT+AGG | + | chr5.4:72488492-72488511 | None:intergenic | 50.0% | |
ATGTGTGTCAAAGGCCGAGA+AGG | + | chr5.4:72490624-72490643 | None:intergenic | 50.0% | |
ATTCCCAGCTTGCAATGTCC+TGG | - | chr5.4:72490269-72490288 | MS.gene038342:intron | 50.0% | |
CACCCAGTCACTTGATTGAG+CGG | + | chr5.4:72490243-72490262 | None:intergenic | 50.0% | |
CTCCGCTCAATCAAGTGACT+GGG | - | chr5.4:72490238-72490257 | MS.gene038342:intron | 50.0% | |
CTTCCAGGACATTGCAAGCT+GGG | + | chr5.4:72490275-72490294 | None:intergenic | 50.0% | |
GGAGAGGTTGAAGAAAGACC+GGG | - | chr5.4:72489740-72489759 | MS.gene038342:CDS | 50.0% | |
TCGGCCTTTGACACACATTG+AGG | - | chr5.4:72490626-72490645 | MS.gene038342:CDS | 50.0% | |
TCGTGCATGCACAACTCAGT+TGG | + | chr5.4:72488584-72488603 | None:intergenic | 50.0% | |
TCTTCCAGGACATTGCAAGC+TGG | + | chr5.4:72490276-72490295 | None:intergenic | 50.0% | |
TGGCAAAGGATCCACAGTGT+TGG | + | chr5.4:72487899-72487918 | None:intergenic | 50.0% | |
! | CAGCTCAATTCCAGCGCTTT+TGG | - | chr5.4:72490565-72490584 | MS.gene038342:intron | 50.0% |
! | GAAGAGGTTGCTGTTGCGTT+TGG | - | chr5.4:72490537-72490556 | MS.gene038342:intron | 50.0% |
! | GATTCAGCTAGTTTGCCGGA+TGG | - | chr5.4:72488263-72488282 | MS.gene038342:intron | 50.0% |
!! | CAAAAGCGCTGGAATTGAGC+TGG | + | chr5.4:72490567-72490586 | None:intergenic | 50.0% |
!! | CAACTCAGTTGGTAGCTGCA+AGG | + | chr5.4:72488573-72488592 | None:intergenic | 50.0% |
!! | TCCACAGTGTTGGCAGTTTC+AGG | + | chr5.4:72487889-72487908 | None:intergenic | 50.0% |
CTCTCAGCCACTATCACCCT+AGG | + | chr5.4:72488961-72488980 | None:intergenic | 55.0% | |
TGCTCAAGTAGCCTACTGGC+TGG | - | chr5.4:72488478-72488497 | MS.gene038342:intron | 55.0% | |
! | CAGCTAGTTTGCCGGATGGT+TGG | - | chr5.4:72488267-72488286 | MS.gene038342:intron | 55.0% |
!! | CTAGGGTGATAGTGGCTGAG+AGG | - | chr5.4:72488959-72488978 | MS.gene038342:intron | 55.0% |
AGGGGTCGGGGTTCGAACTT+CGG | + | chr5.4:72488538-72488557 | None:intergenic | 60.0% | |
CAAAGGCCGAGAAGGTCGAC+AGG | + | chr5.4:72490616-72490635 | None:intergenic | 60.0% | |
TTTGGAAGTGGAGCGTGGGC+TGG | - | chr5.4:72491194-72491213 | MS.gene038342:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 72487307 | 72493081 | 72487307 | ID=MS.gene038342 |
chr5.4 | mRNA | 72487307 | 72493081 | 72487307 | ID=MS.gene038342.t1;Parent=MS.gene038342 |
chr5.4 | exon | 72493003 | 72493081 | 72493003 | ID=MS.gene038342.t1.exon1;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72493003 | 72493081 | 72493003 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72492381 | 72492513 | 72492381 | ID=MS.gene038342.t1.exon2;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72492381 | 72492513 | 72492381 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72492032 | 72492192 | 72492032 | ID=MS.gene038342.t1.exon3;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72492032 | 72492192 | 72492032 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72491025 | 72491188 | 72491025 | ID=MS.gene038342.t1.exon4;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72491025 | 72491188 | 72491025 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72490567 | 72490647 | 72490567 | ID=MS.gene038342.t1.exon5;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72490567 | 72490647 | 72490567 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72490372 | 72490491 | 72490372 | ID=MS.gene038342.t1.exon6;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72490372 | 72490491 | 72490372 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72489729 | 72489851 | 72489729 | ID=MS.gene038342.t1.exon7;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72489729 | 72489851 | 72489729 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72489173 | 72489247 | 72489173 | ID=MS.gene038342.t1.exon8;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72489173 | 72489247 | 72489173 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72488992 | 72489080 | 72488992 | ID=MS.gene038342.t1.exon9;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72488992 | 72489080 | 72488992 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72488794 | 72488902 | 72488794 | ID=MS.gene038342.t1.exon10;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72488794 | 72488902 | 72488794 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72488543 | 72488611 | 72488543 | ID=MS.gene038342.t1.exon11;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72488543 | 72488611 | 72488543 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72488355 | 72488465 | 72488355 | ID=MS.gene038342.t1.exon12;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72488355 | 72488465 | 72488355 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
chr5.4 | exon | 72487307 | 72488227 | 72487307 | ID=MS.gene038342.t1.exon13;Parent=MS.gene038342.t1 |
chr5.4 | CDS | 72487307 | 72488227 | 72487307 | ID=cds.MS.gene038342.t1;Parent=MS.gene038342.t1 |
Gene Sequence |
Protein sequence |