AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene038326

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038326.t1 MTR_5g091450 86.790 810 62 3 1 783 1 792 0.0 1409
MS.gene038326.t1 MTR_5g091180 58.333 780 211 10 7 756 7 702 0.0 797
MS.gene038326.t1 MTR_5g091430 60.201 598 179 6 188 783 10 550 0.0 667
MS.gene038326.t1 MTR_5g091550 54.352 517 155 7 3 478 2 478 2.53e-167 492
MS.gene038326.t1 MTR_5g091550 53.831 522 155 7 3 478 2 483 1.79e-166 490
MS.gene038326.t1 MTR_5g091530 59.801 403 114 3 92 466 2 384 6.02e-152 449
MS.gene038326.t1 MTR_5g091410 67.029 276 89 2 176 450 27 301 9.74e-120 372
MS.gene038326.t1 MTR_5g091410 65.665 233 68 2 551 783 329 549 8.05e-76 256
MS.gene038326.t1 MTR_5g086700 57.062 354 113 6 174 492 533 882 4.80e-112 367
MS.gene038326.t1 MTR_5g086700 69.388 147 42 2 29 175 41 184 1.61e-58 216
MS.gene038326.t1 MTR_5g086700 57.062 354 113 6 174 492 533 882 5.37e-112 367
MS.gene038326.t1 MTR_5g086700 69.388 147 42 2 29 175 41 184 1.70e-58 216
MS.gene038326.t1 MTR_3g079840 60.063 318 95 4 174 462 528 842 5.33e-108 356
MS.gene038326.t1 MTR_3g079840 66.667 147 48 1 29 175 34 179 8.62e-58 214
MS.gene038326.t1 MTR_3g079840 60.063 318 95 4 174 462 529 843 5.48e-108 356
MS.gene038326.t1 MTR_3g079840 66.667 147 48 1 29 175 35 180 8.65e-58 214
MS.gene038326.t1 MTR_1g041240 51.186 295 114 4 174 438 529 823 1.05e-82 286
MS.gene038326.t1 MTR_1g041240 53.289 152 69 2 29 180 36 185 1.08e-44 174
MS.gene038326.t1 MTR_1g041240 51.186 295 114 4 174 438 528 822 1.23e-82 286
MS.gene038326.t1 MTR_1g041240 54.000 150 67 2 31 180 37 184 1.42e-44 174
MS.gene038326.t1 MTR_1g041240 51.186 295 114 4 174 438 530 824 1.23e-82 286
MS.gene038326.t1 MTR_1g041240 54.000 150 67 2 31 180 39 186 1.40e-44 174
MS.gene038326.t1 MTR_7g107200 41.732 127 72 2 51 175 13 139 2.32e-27 115
MS.gene038326.t1 MTR_1g042160 36.508 126 79 1 51 175 13 138 8.43e-27 112
MS.gene038326.t1 MTR_1g073800 35.976 164 87 5 26 175 13 172 3.31e-22 100
MS.gene038326.t1 MTR_1g073790 39.844 128 68 4 51 175 62 183 3.32e-22 103
MS.gene038326.t1 MTR_1g044450 39.683 126 71 3 51 175 65 186 5.44e-22 102
MS.gene038326.t1 MTR_4g123750 32.796 186 110 6 41 216 9 189 8.55e-22 97.4
MS.gene038326.t1 MTR_4g123750 29.630 135 92 2 44 176 169 302 1.98e-12 69.3
MS.gene038326.t1 MTR_7g107160 35.294 136 75 4 52 176 131 264 6.06e-17 84.7
MS.gene038326.t1 MTR_3g106700 31.852 135 82 2 51 175 406 540 1.25e-16 85.5
MS.gene038326.t1 MTR_3g106700 29.365 126 85 3 54 175 71 196 1.02e-14 79.3
MS.gene038326.t1 MTR_8g011730 28.188 149 93 4 30 175 3 140 3.45e-16 81.3
MS.gene038326.t1 MTR_8g006190 36.283 113 66 2 69 175 10 122 8.92e-16 80.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene038326.t1 AT5G06600 48.023 354 143 8 174 492 529 876 2.59e-82 283
MS.gene038326.t1 AT5G06600 63.699 146 51 2 32 176 36 180 6.78e-53 199
MS.gene038326.t1 AT3G11910 46.045 354 151 7 174 492 526 874 7.30e-82 284
MS.gene038326.t1 AT3G11910 61.429 140 53 1 38 177 41 179 7.35e-51 193
MS.gene038326.t1 AT3G11910 46.045 354 151 7 174 492 526 874 7.30e-82 284
MS.gene038326.t1 AT3G11910 61.429 140 53 1 38 177 41 179 7.35e-51 193
MS.gene038326.t1 AT3G11910 46.045 354 151 7 174 492 527 875 7.90e-82 284
MS.gene038326.t1 AT3G11910 61.429 140 53 1 38 177 42 180 7.64e-51 193
MS.gene038326.t1 AT3G11910 46.045 354 151 7 174 492 527 875 7.90e-82 284
MS.gene038326.t1 AT3G11910 61.429 140 53 1 38 177 42 180 7.64e-51 193
MS.gene038326.t1 AT5G06600 48.023 354 143 8 174 492 528 875 9.62e-82 283
MS.gene038326.t1 AT5G06600 63.699 146 51 2 32 176 35 179 8.86e-53 199
MS.gene038326.t1 AT5G06600 48.023 354 143 8 174 492 529 876 9.71e-82 283
MS.gene038326.t1 AT5G06600 63.699 146 51 2 32 176 36 180 8.96e-53 199
MS.gene038326.t1 AT3G58250 46.094 128 66 2 51 175 10 137 9.84e-30 120
MS.gene038326.t1 AT3G58370 45.669 127 67 1 51 175 9 135 1.56e-28 117
MS.gene038326.t1 AT3G58270 46.825 126 66 1 51 176 8 132 2.39e-28 117
MS.gene038326.t1 AT3G58270 46.825 126 66 1 51 176 8 132 2.39e-28 117
MS.gene038326.t1 AT3G58270 46.825 126 66 1 51 176 8 132 2.39e-28 117
MS.gene038326.t1 AT3G58210 32.273 220 129 4 51 261 8 216 1.41e-26 112
MS.gene038326.t1 AT3G58410 40.000 125 71 2 51 175 8 128 2.58e-26 110
MS.gene038326.t1 AT3G27040 37.681 138 84 1 51 186 9 146 3.13e-24 103
MS.gene038326.t1 AT2G01790 37.725 167 90 4 54 206 11 177 8.90e-23 99.4
MS.gene038326.t1 AT3G58340 28.899 218 139 5 51 260 8 217 2.07e-22 99.8
MS.gene038326.t1 AT3G58260 34.395 157 95 3 52 200 9 165 5.54e-22 98.2
MS.gene038326.t1 AT3G58340 29.108 213 135 5 51 260 8 207 5.72e-22 98.2
MS.gene038326.t1 AT3G58360 37.241 145 88 2 51 193 8 151 7.77e-22 97.4
MS.gene038326.t1 AT2G05410 36.957 138 83 3 52 186 9 145 1.10e-21 97.1
MS.gene038326.t1 AT3G58350 35.433 127 80 1 51 175 8 134 1.48e-21 96.7
MS.gene038326.t1 AT3G58350 35.433 127 80 1 51 175 8 134 1.48e-21 96.7
MS.gene038326.t1 AT3G58410 38.400 125 59 3 51 175 29 135 2.01e-21 96.7
MS.gene038326.t1 AT5G43560 41.732 127 69 3 53 179 72 193 2.83e-21 100
MS.gene038326.t1 AT5G43560 41.732 127 69 3 53 179 72 193 2.83e-21 100
MS.gene038326.t1 AT1G04300 40.476 126 70 3 51 175 69 190 1.32e-20 98.2
MS.gene038326.t1 AT5G52330 37.795 127 74 3 53 179 22 143 1.33e-20 95.5
MS.gene038326.t1 AT5G52330 37.795 127 74 3 53 179 22 143 1.33e-20 95.5
MS.gene038326.t1 AT5G52330 37.795 127 74 3 53 179 22 143 1.33e-20 95.5
MS.gene038326.t1 AT3G58290 32.973 185 102 6 51 219 11 189 2.50e-20 92.4
MS.gene038326.t1 AT3G17380 32.738 168 106 4 42 202 12 179 8.67e-20 91.7
MS.gene038326.t1 AT3G58220 34.884 129 76 4 52 175 13 138 9.16e-20 93.6
MS.gene038326.t1 AT3G58220 34.884 129 76 4 52 175 13 138 1.34e-19 91.7
MS.gene038326.t1 AT3G58220 34.884 129 76 4 52 175 13 138 1.51e-19 91.7
MS.gene038326.t1 AT3G58220 34.884 129 76 4 52 175 13 138 2.67e-19 89.0
MS.gene038326.t1 AT3G58220 34.884 129 76 4 52 175 13 138 2.70e-19 90.1
MS.gene038326.t1 AT1G04300 38.806 134 69 4 51 175 69 198 4.19e-19 93.2
MS.gene038326.t1 AT2G05420 36.364 143 81 3 53 186 11 152 5.60e-19 89.0
MS.gene038326.t1 AT1G31390 38.136 118 71 1 51 166 8 125 9.51e-19 87.4
MS.gene038326.t1 AT3G44790 36.957 138 81 2 51 186 5 138 4.95e-18 86.7
MS.gene038326.t1 AT1G04300 41.667 108 58 3 69 175 68 171 1.31e-17 88.6
MS.gene038326.t1 AT3G58200 32.456 114 77 0 51 164 8 121 7.95e-17 82.8
MS.gene038326.t1 AT3G44800 35.433 127 80 1 51 175 5 131 1.21e-16 82.8
MS.gene038326.t1 AT3G58400 33.871 124 79 2 72 193 24 146 1.60e-16 81.6
MS.gene038326.t1 AT4G09780 39.259 135 77 3 51 182 214 346 3.24e-16 82.4
MS.gene038326.t1 AT4G09770 38.519 135 78 3 51 182 160 292 1.50e-15 78.6
MS.gene038326.t1 AT4G09770 38.519 135 78 3 51 182 160 292 1.50e-15 78.6
MS.gene038326.t1 AT2G25320 30.405 148 92 3 51 188 404 550 1.81e-15 81.6
MS.gene038326.t1 AT2G25320 26.190 126 89 3 54 175 75 200 1.96e-14 78.2
MS.gene038326.t1 AT2G25320 30.405 148 92 3 51 188 405 551 1.81e-15 81.6
MS.gene038326.t1 AT2G25320 26.190 126 89 3 54 175 76 201 1.93e-14 78.2
MS.gene038326.t1 AT4G09770 38.519 135 78 3 51 182 186 318 2.03e-15 78.6
MS.gene038326.t1 AT3G58240 29.952 207 124 6 51 241 8 209 2.76e-15 78.2
MS.gene038326.t1 AT2G25320 30.405 148 92 3 51 188 405 551 4.70e-15 80.5
MS.gene038326.t1 AT2G25320 26.923 130 83 4 54 175 76 201 3.02e-14 77.8
MS.gene038326.t1 AT5G26260 30.233 129 85 3 69 193 82 209 5.11e-15 77.8
MS.gene038326.t1 AT1G31400 35.172 145 87 4 51 191 8 149 1.84e-14 75.1
MS.gene038326.t1 AT2G42460 36.567 134 80 3 52 183 10 140 5.34e-14 73.9
MS.gene038326.t1 AT4G09780 36.986 146 76 5 51 182 214 357 7.06e-14 75.1
MS.gene038326.t1 AT2G25330 26.923 130 83 4 54 175 50 175 4.14e-13 73.6
MS.gene038326.t1 AT2G25330 32.593 135 81 2 51 175 359 493 3.62e-12 70.5
MS.gene038326.t1 AT3G29580 32.540 126 81 3 51 174 8 131 6.16e-13 70.9
MS.gene038326.t1 AT3G20370 34.615 130 79 3 51 175 218 346 8.99e-12 67.8
MS.gene038326.t1 AT3G20370 34.615 130 79 3 51 175 240 368 1.03e-11 67.8
MS.gene038326.t1 AT2G32870 31.013 158 97 6 29 176 253 408 1.08e-11 68.2
MS.gene038326.t1 AT3G58280 31.731 104 65 3 74 175 31 130 2.15e-11 66.2
MS.gene038326.t1 AT2G04170 29.730 111 74 2 69 175 29 139 2.65e-11 65.9
MS.gene038326.t1 AT2G04170 29.730 111 74 2 69 175 29 139 2.65e-11 65.9
MS.gene038326.t1 AT5G26280 30.631 111 73 2 69 175 81 191 2.73e-11 66.2
MS.gene038326.t1 AT5G26280 30.631 111 73 2 69 175 100 210 2.82e-11 66.6
MS.gene038326.t1 AT2G04170 29.730 111 74 2 69 175 151 261 6.51e-11 65.5
MS.gene038326.t1 AT2G04170 29.730 111 74 2 69 175 111 221 6.79e-11 65.5
MS.gene038326.t1 AT2G04170 29.730 111 74 2 69 175 151 261 7.57e-11 65.5
MS.gene038326.t1 AT2G04170 29.730 111 74 2 69 175 151 261 7.57e-11 65.5
MS.gene038326.t1 AT2G04170 29.839 124 79 3 69 184 151 274 9.42e-11 64.3

Find 141 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCTTCAATCTCATCAATTT+TGG 0.131114 5.4:+72176762 None:intergenic
TTCAACCAAGTCTTCTTTAA+AGG 0.147736 5.4:+72177128 None:intergenic
TCCACAGTGTTGGGAGTTTC+AGG 0.162960 5.4:+72182287 None:intergenic
CTTAACAAGCTTAAATAAAT+TGG 0.174133 5.4:-72178190 MS.gene038326:CDS
CAGCTCAATTCCAGCGCTTT+TGG 0.197378 5.4:-72179122 MS.gene038326:CDS
GGACCATTTGTCCATGTATT+TGG 0.218747 5.4:-72181905 MS.gene038326:CDS
CCCTTTCTTGTTCATTGAAT+TGG 0.231596 5.4:+72181008 None:intergenic
ACATATCATCCTTTCCCTTA+TGG 0.242950 5.4:+72178391 None:intergenic
TCTTCATCCGATGGAGAAAA+AGG 0.245749 5.4:+72177651 None:intergenic
CCATGAGTGCAGTTAGAAAA+TGG 0.257433 5.4:-72177907 MS.gene038326:intron
ATCTTGGTCAGTGCTCTTCT+TGG 0.258512 5.4:+72176924 None:intergenic
TTGAGAAGAGCTGGCTTTGC+TGG 0.273775 5.4:+72177341 None:intergenic
TCCGTCACATTGTTCCCTTT+TGG 0.282535 5.4:+72181925 None:intergenic
TCCAATTCAGTTTGCGCCTC+CGG 0.296644 5.4:+72176637 None:intergenic
AGCAAATACACAAATCAAAA+TGG 0.312364 5.4:+72176574 None:intergenic
CCTCCCTACGCAACTGCTTC+AGG 0.312763 5.4:-72177166 MS.gene038326:CDS
TTCGATTCACATGGAGAATT+GGG 0.315381 5.4:-72182235 MS.gene038326:CDS
TTTCGATTCACATGGAGAAT+TGG 0.317807 5.4:-72182236 MS.gene038326:CDS
ACTGCATTGAAGTTAACTTT+AGG 0.321422 5.4:+72177084 None:intergenic
TCTTCAATGCTTCATTATCT+TGG 0.326570 5.4:+72176908 None:intergenic
TCTCCTTTCATCTTTGTTAC+CGG 0.330006 5.4:+72182512 None:intergenic
GCTGGTACCTTCATCATTAG+TGG 0.337647 5.4:+72177524 None:intergenic
ACGATACATCTCGTCCATTT+CGG 0.343878 5.4:-72179080 MS.gene038326:CDS
ATTCAGATGTATTTGAAGTT+GGG 0.347725 5.4:-72182181 MS.gene038326:CDS
TCCTGATGTGCGTTCATACT+TGG 0.356835 5.4:-72177827 MS.gene038326:CDS
AGAAGGTCTACAGAATCTTC+AGG 0.363813 5.4:-72176606 MS.gene038326:CDS
GACCTCTTCTTGTCCTTTGA+CGG 0.368043 5.4:+72177206 None:intergenic
AATGTTAATTTCTTGTCAAC+AGG 0.368724 5.4:+72178010 None:intergenic
AAGCAGTTGCGTAGGGAGGC+TGG 0.371713 5.4:+72177170 None:intergenic
CCCGGAGGCGCAAACTGAAT+TGG 0.373000 5.4:-72176638 MS.gene038326:CDS
ACAAGAAGAGGTCTCAAAAC+TGG 0.378335 5.4:-72177196 MS.gene038326:CDS
CAAGAGAGTTGCGTTGTGTT+TGG 0.385406 5.4:+72176839 None:intergenic
CAATGAACAAGAAAGGGATT+GGG 0.391490 5.4:-72181002 MS.gene038326:CDS
ATGCGTGTCAGCGGCCGAAA+TGG 0.391617 5.4:+72179066 None:intergenic
TATTCAGATGTATTTGAAGT+TGG 0.397400 5.4:-72182182 MS.gene038326:CDS
AGATGAAGACCTTGCAAAAC+AGG 0.401155 5.4:-72180416 MS.gene038326:CDS
CCAATTCAGTTTGCGCCTCC+GGG 0.402649 5.4:+72176638 None:intergenic
CCCTTCTATGGCAGTTATGC+TGG 0.403569 5.4:-72178252 MS.gene038326:intron
AATCAAAGATGAAGAATCAT+TGG 0.415099 5.4:-72177628 MS.gene038326:CDS
TCAATGAACAAGAAAGGGAT+TGG 0.426035 5.4:-72181003 MS.gene038326:CDS
GTTTGTGAGGGAAGTCTTTG+AGG 0.426518 5.4:+72176864 None:intergenic
CCCTTATGGAGAGGCTCAAT+GGG 0.427339 5.4:+72178405 None:intergenic
TCCCATTGAGCCTCTCCATA+AGG 0.433943 5.4:-72178406 MS.gene038326:CDS
CATCCAAATACATGGACAAA+TGG 0.437660 5.4:+72181902 None:intergenic
ACCAATTCAATGAACAAGAA+AGG 0.439765 5.4:-72181009 MS.gene038326:CDS
TCCCTTATGGAGAGGCTCAA+TGG 0.441465 5.4:+72178404 None:intergenic
GGCTGACTATCCACAGTGTT+GGG 0.442470 5.4:+72182278 None:intergenic
TAAAGTTCAATCTCTTCATC+AGG 0.447128 5.4:+72178156 None:intergenic
TCCAAGTATGAACGCACATC+AGG 0.466295 5.4:+72177826 None:intergenic
CATCAATATCTTTCAAGTCT+AGG 0.467462 5.4:+72177310 None:intergenic
TGAAGAGATTGAACTTTATG+AGG 0.473021 5.4:-72178151 MS.gene038326:intron
CTGACACGCATTGAGGAAGC+AGG 0.478145 5.4:-72179054 MS.gene038326:CDS
TTCACTTCCTTCATACGTCT+CGG 0.481263 5.4:-72180977 MS.gene038326:CDS
CAGCTAATTTGCCCAATGGT+TGG 0.482354 5.4:-72181870 MS.gene038326:CDS
AATTGCATGATCTTCGTAAA+GGG 0.483893 5.4:-72180952 MS.gene038326:CDS
ACAAGCTTAAATAAATTGGC+TGG 0.484761 5.4:-72178186 MS.gene038326:CDS
CGCAACTGCTTCAGGAGTTG+AGG 0.488592 5.4:-72177158 MS.gene038326:CDS
CCAATTCAATGAACAAGAAA+GGG 0.492931 5.4:-72181008 MS.gene038326:CDS
TTCAGATGTATTTGAAGTTG+GGG 0.498270 5.4:-72182180 MS.gene038326:CDS
TGCATAACTACTCCAACCAT+TGG 0.500693 5.4:+72181858 None:intergenic
CCCATTGAGCCTCTCCATAA+GGG 0.501094 5.4:-72178405 MS.gene038326:CDS
GAGAGTTGCGTTGTGTTTGG+TGG 0.502859 5.4:+72176842 None:intergenic
GCAACTGCTTCAGGAGTTGA+GGG 0.507243 5.4:-72177157 MS.gene038326:CDS
TCTTTGATTTCTTCATCCGA+TGG 0.512081 5.4:+72177642 None:intergenic
TGTAGCTCAACAGTTAAAAG+TGG 0.515848 5.4:-72177556 MS.gene038326:CDS
GGAATATGTGCACAATCTCC+AGG 0.518923 5.4:-72177806 MS.gene038326:intron
AAATTGCATGATCTTCGTAA+AGG 0.521351 5.4:-72180953 MS.gene038326:CDS
CAGGATTGATTGATGGAAGC+CGG 0.522662 5.4:-72182531 None:intergenic
GCATAACTACTCCAACCATT+GGG 0.523533 5.4:+72181859 None:intergenic
AATGAACAAGAAAGGGATTG+GGG 0.524524 5.4:-72181001 MS.gene038326:CDS
CAATCTCAGCATTCCGTCAA+AGG 0.525036 5.4:-72177219 MS.gene038326:CDS
TTTGGAAGTGGAGCATGGAC+CGG 0.526588 5.4:-72178536 MS.gene038326:intron
TGAAGCTCAACTGGCAAAAG+TGG 0.527775 5.4:-72177391 MS.gene038326:CDS
AGGCTGACTATCCACAGTGT+TGG 0.532200 5.4:+72182277 None:intergenic
TATTGCCTTTAAAGAAGACT+TGG 0.532758 5.4:-72177133 MS.gene038326:CDS
TTGTGTTTGGTGGTTTGTGA+GGG 0.534784 5.4:+72176852 None:intergenic
AGCAGTTGCGTAGGGAGGCT+GGG 0.540158 5.4:+72177171 None:intergenic
AAGCTTGTTAAGATTTCTGA+TGG 0.540451 5.4:+72178201 None:intergenic
CTTCACCGTTTCGATTCACA+TGG 0.542335 5.4:-72182244 MS.gene038326:CDS
AACGGTGAAGAATCTTTGAC+AGG 0.545138 5.4:+72182257 None:intergenic
CAATTTACCGAGACGTATGA+AGG 0.547085 5.4:+72180970 None:intergenic
GAAGGTCTACAGAATCTTCA+GGG 0.550028 5.4:-72176605 MS.gene038326:CDS
ACAGGGACCGCTCACAATGA+AGG 0.552508 5.4:-72177366 MS.gene038326:CDS
CTTAATTTCAGGAGAAGTAA+CGG 0.553281 5.4:+72182479 None:intergenic
TTGCCAATACCCAAAAGCGC+TGG 0.557699 5.4:+72179112 None:intergenic
CAAAGATGAAGAATCATTGG+AGG 0.557950 5.4:-72177625 MS.gene038326:CDS
CAAAAGCGCTGGAATTGAGC+TGG 0.558135 5.4:+72179123 None:intergenic
GTCTTGAACATCCAAATACA+TGG 0.558257 5.4:+72181894 None:intergenic
ATTCTCCATGTGAATCGAAA+CGG 0.561641 5.4:+72182239 None:intergenic
TGATATTATATGCTTTCAGA+AGG 0.562815 5.4:-72177884 MS.gene038326:CDS
GACTCAGCTAATTTGCCCAA+TGG 0.564019 5.4:-72181874 MS.gene038326:CDS
GCTGGAACCTTCATTGTGAG+CGG 0.569556 5.4:+72177359 None:intergenic
ATGAACGCACATCAGGATAA+CGG 0.571343 5.4:+72177833 None:intergenic
ACTCCTGAAGCAGTTGCGTA+GGG 0.572958 5.4:+72177163 None:intergenic
TCGATTCACATGGAGAATTG+GGG 0.573954 5.4:-72182234 MS.gene038326:CDS
AAAAGAAAGATAACACATAG+AGG 0.574625 5.4:-72182456 MS.gene038326:intron
AACATGTACTCTGTGAGAAG+AGG 0.577282 5.4:-72181802 MS.gene038326:intron
GAAGACCTTGCAAAACAGGT+TGG 0.580445 5.4:-72180412 MS.gene038326:CDS
CGATTCACATGGAGAATTGG+GGG 0.582983 5.4:-72182233 MS.gene038326:CDS
TCGGCCGCTGACACGCATTG+AGG 0.585685 5.4:-72179061 MS.gene038326:CDS
TTTGATCATTAGCGAGACGA+TGG 0.588794 5.4:+72176689 None:intergenic
ATTAACATTTCAAGAAAGTG+AGG 0.589285 5.4:-72177996 MS.gene038326:intron
TGAATTGGAAAGTCATGAGA+AGG 0.590278 5.4:-72176623 MS.gene038326:CDS
AACTCCTGAAGCAGTTGCGT+AGG 0.591168 5.4:+72177162 None:intergenic
TCTATGGCAGTTATGCTGGA+AGG 0.597694 5.4:-72178248 MS.gene038326:intron
GCCAACAATTCAAAATTCGT+CGG 0.598812 5.4:-72177498 MS.gene038326:CDS
ACAGTTAAAAGTGGACATAG+AGG 0.599638 5.4:-72177547 MS.gene038326:CDS
ATAGAGGCCACTAATGATGA+AGG 0.600160 5.4:-72177531 MS.gene038326:CDS
TCATCCTTTCCCTTATGGAG+AGG 0.601023 5.4:+72178396 None:intergenic
AAATACACAAATCAAAATGG+AGG 0.601137 5.4:+72176577 None:intergenic
GCAGGTTGGAGAACTGAAAG+TGG 0.602124 5.4:-72178593 MS.gene038326:intron
AATTAATGATATGATACTTG+AGG 0.602906 5.4:-72177460 MS.gene038326:CDS
TTCCGTCAAAGGACAAGAAG+AGG 0.603943 5.4:-72177208 MS.gene038326:CDS
GTTGTGTTTGGTGGTTTGTG+AGG 0.604368 5.4:+72176851 None:intergenic
AATACACAAATCAAAATGGA+GGG 0.608058 5.4:+72176578 None:intergenic
ATTTCAGGAGAAGTAACGGT+AGG 0.610525 5.4:+72182483 None:intergenic
TGAGCCTCTCCATAAGGGAA+AGG 0.610715 5.4:-72178400 MS.gene038326:CDS
CCCAAAAGGGAACAATGTGA+CGG 0.610722 5.4:-72181926 MS.gene038326:CDS
AAGTGTTGAAGAGAAAATCC+CGG 0.614365 5.4:-72176656 MS.gene038326:CDS
CCTTCACAATAGTGTTGAGA+AGG 0.614803 5.4:+72176989 None:intergenic
AGATACGGCTGAGCATATAA+CGG 0.616781 5.4:-72180870 MS.gene038326:intron
CAATGTGGATGAGAAAGATA+CGG 0.620680 5.4:-72180885 MS.gene038326:CDS
AGTTAACTTCAATGCAGTCA+AGG 0.621155 5.4:-72177079 MS.gene038326:CDS
TGACACGCATTGAGGAAGCA+GGG 0.624439 5.4:-72179053 MS.gene038326:CDS
ACAGGCTCACACAAGACAGT+TGG 0.628095 5.4:+72178028 None:intergenic
TCGTAGACTATGACAAAGTG+AGG 0.630356 5.4:-72180369 MS.gene038326:CDS
CCTTCTCAACACTATTGTGA+AGG 0.632483 5.4:-72176989 MS.gene038326:CDS
TCTCGTCAATTAGAACAAGT+TGG 0.633272 5.4:-72177024 MS.gene038326:CDS
AGAACTGAAAGTGGTAAACA+AGG 0.635246 5.4:-72178584 MS.gene038326:CDS
CAACTGGCAAAAGTGGACAC+AGG 0.637463 5.4:-72177384 MS.gene038326:CDS
TCAGATGTATTTGAAGTTGG+GGG 0.638171 5.4:-72182179 MS.gene038326:CDS
AACTTGTTCTAATTGACGAG+AGG 0.641144 5.4:+72177026 None:intergenic
AAGCCGGTAACAAAGATGAA+AGG 0.641389 5.4:-72182515 MS.gene038326:CDS
CCTGAAGCAGTTGCGTAGGG+AGG 0.643484 5.4:+72177166 None:intergenic
GCTTCCTCAATGCGTGTCAG+CGG 0.654810 5.4:+72179057 None:intergenic
TTGACGAGAGGTGAACGCGT+CGG 0.655338 5.4:+72177038 None:intergenic
AACTGGCAAAAGTGGACACA+GGG 0.655974 5.4:-72177383 MS.gene038326:CDS
TATTGATGCTATGATAGATG+AGG 0.684819 5.4:-72177295 MS.gene038326:CDS
ACCTGAAACTCCCAACACTG+TGG 0.701320 5.4:-72182288 MS.gene038326:CDS
AGTTGAAGTAACATGCAATG+TGG 0.732861 5.4:-72180900 MS.gene038326:CDS
TGTTGAAGAGAAAATCCCGG+AGG 0.793807 5.4:-72176653 MS.gene038326:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATAAAGATATAAAAGA+AGG + chr5.4:72180365-72180384 None:intergenic 10.0%
!!! CTTTATTAAGATTTTTTTTA+GGG + chr5.4:72178932-72178951 None:intergenic 10.0%
!!! TAAAATAATTGTTTTCTATA+AGG + chr5.4:72179736-72179755 None:intergenic 10.0%
!!! TCTTTATTAAGATTTTTTTT+AGG + chr5.4:72178933-72178952 None:intergenic 10.0%
!!! TTTATTAAGATTTTTTTTAG+GGG + chr5.4:72178931-72178950 None:intergenic 10.0%
!! AAATCTTAATAAAGAAAAAC+CGG - chr5.4:72178938-72178957 MS.gene038326:intron 15.0%
!! AACATTATGAATATTATTTC+AGG + chr5.4:72176990-72177009 None:intergenic 15.0%
!! ACATTATGAATATTATTTCA+GGG + chr5.4:72176989-72177008 None:intergenic 15.0%
!! TAAATCAATAAGAAAACAAA+TGG + chr5.4:72181176-72181195 None:intergenic 15.0%
!! TATATATATATTCAAACTGT+AGG + chr5.4:72177721-72177740 None:intergenic 15.0%
!! TGATAATAAAAAATATTCTC+AGG - chr5.4:72178661-72178680 MS.gene038326:intron 15.0%
!!! GATTTGTTATATAATTTATG+AGG - chr5.4:72179854-72179873 MS.gene038326:intron 15.0%
!!! GTACTTTATTAAGTTTTATT+AGG + chr5.4:72178909-72178928 None:intergenic 15.0%
!! AAAGCACAAAAATAAAGAAA+AGG - chr5.4:72178516-72178535 MS.gene038326:intron 20.0%
!! AATACATTTAGTATCAACTA+AGG + chr5.4:72180834-72180853 None:intergenic 20.0%
!! AATCTTAATAAAGAAAAACC+GGG - chr5.4:72178939-72178958 MS.gene038326:intron 20.0%
!! AATTAATGATATGATACTTG+AGG - chr5.4:72181647-72181666 MS.gene038326:intron 20.0%
!! ACAAACAAAACAAATATCTA+AGG + chr5.4:72178588-72178607 None:intergenic 20.0%
!! ACTTCAAATCATAGATAAAT+TGG + chr5.4:72180463-72180482 None:intergenic 20.0%
!! AGAAAAAGGATAAGAATAAA+TGG + chr5.4:72181395-72181414 None:intergenic 20.0%
!! AGTGGAAAAAAAAAATTAGA+AGG + chr5.4:72177138-72177157 None:intergenic 20.0%
!! CATTATGAATATTATTTCAG+GGG + chr5.4:72176988-72177007 None:intergenic 20.0%
!! CCTTTAATTAAACATCAAAA+AGG + chr5.4:72181332-72181351 None:intergenic 20.0%
!! CTTAAATTAAGTGAAAAACT+TGG + chr5.4:72176744-72176763 None:intergenic 20.0%
!! CTTAACAAGCTTAAATAAAT+TGG - chr5.4:72180917-72180936 MS.gene038326:CDS 20.0%
!! CTTCATAATATAAATGTTAC+CGG + chr5.4:72180593-72180612 None:intergenic 20.0%
!! GAAAAAGGATAAGAATAAAT+GGG + chr5.4:72181394-72181413 None:intergenic 20.0%
!! TAAAGTACAAATATCATATG+AGG + chr5.4:72179295-72179314 None:intergenic 20.0%
!! TATAAAAAATGACAGTGTTT+CGG + chr5.4:72178321-72178340 None:intergenic 20.0%
!! TTGGTTGAAAAATTTAAAGA+AGG - chr5.4:72181993-72182012 MS.gene038326:intron 20.0%
!!! AATCTACTATTTCATGTTTT+GGG - chr5.4:72180268-72180287 MS.gene038326:intron 20.0%
!!! AATTTAGGATAGAATATTCT+CGG + chr5.4:72179006-72179025 None:intergenic 20.0%
!!! AGCAGAATTAAAATTGTTTT+TGG - chr5.4:72180553-72180572 MS.gene038326:intron 20.0%
!!! ATCTTTCTTTTCTTAATTTC+AGG + chr5.4:72176642-72176661 None:intergenic 20.0%
!!! ATTAAAATTGTTTTTGGAAG+TGG - chr5.4:72180559-72180578 MS.gene038326:intron 20.0%
!!! CAAGTTTTTCACTTAATTTA+AGG - chr5.4:72176742-72176761 MS.gene038326:CDS 20.0%
!!! CCTTTTTGATGTTTAATTAA+AGG - chr5.4:72181329-72181348 MS.gene038326:intron 20.0%
!!! TGAAAATGCACATAATTTTT+GGG - chr5.4:72178027-72178046 MS.gene038326:CDS 20.0%
!!! TTTATTCTTATCCTTTTTCT+AGG - chr5.4:72181395-72181414 MS.gene038326:intron 20.0%
! AAAAGAAAGATAACACATAG+AGG - chr5.4:72176651-72176670 MS.gene038326:CDS 25.0%
! AAACACCACAAATATTCATA+TGG + chr5.4:72179818-72179837 None:intergenic 25.0%
! AAGAGATCTTATGAATTTAC+AGG + chr5.4:72180080-72180099 None:intergenic 25.0%
! AATCAAAGATGAAGAATCAT+TGG - chr5.4:72181479-72181498 MS.gene038326:intron 25.0%
! AATGTTAATTTCTTGTCAAC+AGG + chr5.4:72181100-72181119 None:intergenic 25.0%
! AATTGCCATATGAATATTTG+TGG - chr5.4:72179810-72179829 MS.gene038326:intron 25.0%
! ACAATAGAGATTGAATGTTA+CGG + chr5.4:72178406-72178425 None:intergenic 25.0%
! AGTTCAGTAGAAAAGTTTAA+TGG + chr5.4:72177605-72177624 None:intergenic 25.0%
! ATAAACAAAGCTAAGATAGA+TGG + chr5.4:72180312-72180331 None:intergenic 25.0%
! ATCATGATGCTTTAATTAGT+TGG - chr5.4:72179777-72179796 MS.gene038326:intron 25.0%
! ATTAACATTTCAAGAAAGTG+AGG - chr5.4:72181111-72181130 MS.gene038326:intron 25.0%
! ATTATGGCTAGTAATATGAT+AGG - chr5.4:72179609-72179628 MS.gene038326:intron 25.0%
! CGTTACAAAGAAAAAACTAT+AGG + chr5.4:72180433-72180452 None:intergenic 25.0%
! GACAAACTGCATTATTATAT+AGG - chr5.4:72180671-72180690 MS.gene038326:intron 25.0%
! GAGAATATTCTATCCTAAAT+TGG - chr5.4:72179005-72179024 MS.gene038326:intron 25.0%
! TAACTTAGTGTACATTAACT+GGG + chr5.4:72181148-72181167 None:intergenic 25.0%
! TATCTCCTCTACTATTAAAA+GGG + chr5.4:72177657-72177676 None:intergenic 25.0%
! TCAATCTATCTATATGTGTT+TGG - chr5.4:72179207-72179226 MS.gene038326:intron 25.0%
! TCATTATATGAGAAGTTGAA+GGG + chr5.4:72180134-72180153 None:intergenic 25.0%
! TGATATTATATGCTTTCAGA+AGG - chr5.4:72181223-72181242 MS.gene038326:intron 25.0%
! TGCTAATATATGTGATATGT+AGG - chr5.4:72179935-72179954 MS.gene038326:intron 25.0%
! TGTAATGAACAGACTAAATA+GGG + chr5.4:72177333-72177352 None:intergenic 25.0%
! TGTAGGCAACATAATTTATT+GGG + chr5.4:72179678-72179697 None:intergenic 25.0%
! TTAACATATGTTCTGGTAAA+CGG - chr5.4:72180804-72180823 MS.gene038326:intron 25.0%
! TTAGCAAGGTAACAAATTAT+TGG + chr5.4:72177541-72177560 None:intergenic 25.0%
! TTGTAATGAACAGACTAAAT+AGG + chr5.4:72177334-72177353 None:intergenic 25.0%
! TTGTAGGCAACATAATTTAT+TGG + chr5.4:72179679-72179698 None:intergenic 25.0%
! TTGTGATTTAACATATGTTC+TGG - chr5.4:72180797-72180816 MS.gene038326:intron 25.0%
!! ATCTTCAATCTCATCAATTT+TGG + chr5.4:72182348-72182367 None:intergenic 25.0%
!! ATTCAGATGTATTTGAAGTT+GGG - chr5.4:72176926-72176945 MS.gene038326:CDS 25.0%
!! CAATCTACTATTTCATGTTT+TGG - chr5.4:72180267-72180286 MS.gene038326:intron 25.0%
!! CTGAAAATGCACATAATTTT+TGG - chr5.4:72178026-72178045 MS.gene038326:CDS 25.0%
!! GAGCAAAACAAAAACATTTT+AGG - chr5.4:72181504-72181523 MS.gene038326:intron 25.0%
!! GATATTTGTACTTTATTTCG+AGG - chr5.4:72179300-72179319 MS.gene038326:intron 25.0%
!! TATTCAGATGTATTTGAAGT+TGG - chr5.4:72176925-72176944 MS.gene038326:CDS 25.0%
!!! ACTTTTTCATTTCTGATTGT+TGG - chr5.4:72180153-72180172 MS.gene038326:intron 25.0%
!!! GAGCGTTTTAAATATGTAAT+TGG + chr5.4:72179033-72179052 None:intergenic 25.0%
!!! GATGTCATTTAACATTTTCA+AGG - chr5.4:72178781-72178800 MS.gene038326:intron 25.0%
!!! GGTTTTCATATTGATTGTTT+TGG - chr5.4:72180405-72180424 MS.gene038326:CDS 25.0%
!!! TTATTCTGAAATATTTGCAC+TGG - chr5.4:72178441-72178460 MS.gene038326:intron 25.0%
!!! TTCTCTTTCATTTTGTTTGA+TGG + chr5.4:72177998-72178017 None:intergenic 25.0%
!!! TTTGCTTTTAATTCCAGAAT+TGG + chr5.4:72177397-72177416 None:intergenic 25.0%
AAATTGCATGATCTTCGTAA+AGG - chr5.4:72178154-72178173 MS.gene038326:CDS 30.0%
AACATCAAAAAGGAAATACC+TGG + chr5.4:72181322-72181341 None:intergenic 30.0%
AAGGAGTAAAATGCTAAATG+TGG + chr5.4:72179413-72179432 None:intergenic 30.0%
AATCTGAATCTTGTCAATTG+AGG - chr5.4:72178845-72178864 MS.gene038326:intron 30.0%
AATTGCATGATCTTCGTAAA+GGG - chr5.4:72178155-72178174 MS.gene038326:CDS 30.0%
ACAAGCTTAAATAAATTGGC+TGG - chr5.4:72180921-72180940 MS.gene038326:CDS 30.0%
ACCAATTCAATGAACAAGAA+AGG - chr5.4:72178098-72178117 MS.gene038326:intron 30.0%
ACTGCATTGAAGTTAACTTT+AGG + chr5.4:72182026-72182045 None:intergenic 30.0%
AGATCACCTTTATAATAGTG+TGG + chr5.4:72178555-72178574 None:intergenic 30.0%
AGTTAGTTACTGGGTTAATT+AGG - chr5.4:72179640-72179659 MS.gene038326:intron 30.0%
ATAAAAGAAGGTAGTCGAAA+TGG + chr5.4:72180353-72180372 None:intergenic 30.0%
ATAACACATAGAGGTAATCA+AGG - chr5.4:72176660-72176679 MS.gene038326:CDS 30.0%
ATAAGGAATGTTAGCATTAG+AGG - chr5.4:72177679-72177698 MS.gene038326:intron 30.0%
ATGACATACTTTGACAATGA+AGG + chr5.4:72179521-72179540 None:intergenic 30.0%
ATGCTTTAATTAGTTGGAAG+AGG - chr5.4:72179783-72179802 MS.gene038326:intron 30.0%
ATGTTGCCTACAAAAAAACT+GGG - chr5.4:72179686-72179705 MS.gene038326:intron 30.0%
ATTAAGTGAAAAACTTGGAG+AGG + chr5.4:72176739-72176758 None:intergenic 30.0%
CAAAAGACCAAAATAGATGT+TGG - chr5.4:72179141-72179160 MS.gene038326:CDS 30.0%
CAATAGAGATTGAATGTTAC+GGG + chr5.4:72178405-72178424 None:intergenic 30.0%
CACTGAAGTTATATACACAT+AGG + chr5.4:72177112-72177131 None:intergenic 30.0%
CATTATATGAGAAGTTGAAG+GGG + chr5.4:72180133-72180152 None:intergenic 30.0%
CCAATTCAATGAACAAGAAA+GGG - chr5.4:72178099-72178118 MS.gene038326:intron 30.0%
CGTAAAATTTGAATGAGCAA+GGG + chr5.4:72177582-72177601 None:intergenic 30.0%
CTAAATGTATTTCCCTTCTA+TGG - chr5.4:72180843-72180862 MS.gene038326:intron 30.0%
CTAGTAATATGATAGGTAAC+CGG - chr5.4:72179616-72179635 MS.gene038326:intron 30.0%
CTATCTCCTCTACTATTAAA+AGG + chr5.4:72177658-72177677 None:intergenic 30.0%
CTCATTCTGATTTAAATTGC+AGG - chr5.4:72180496-72180515 MS.gene038326:intron 30.0%
CTTAATTTCAGGAGAAGTAA+CGG + chr5.4:72176631-72176650 None:intergenic 30.0%
GCAATTTAAATCAGAATGAG+AGG + chr5.4:72180496-72180515 None:intergenic 30.0%
GCAGTTTGTCAATCATATAT+AGG + chr5.4:72180661-72180680 None:intergenic 30.0%
GGAAAGAATACATATACAAG+TGG + chr5.4:72177636-72177655 None:intergenic 30.0%
GGTTAATTAGGTACTTAGTT+AGG - chr5.4:72179652-72179671 MS.gene038326:intron 30.0%
GTAACTTAGTGTACATTAAC+TGG + chr5.4:72181149-72181168 None:intergenic 30.0%
GTCATTATATGAGAAGTTGA+AGG + chr5.4:72180135-72180154 None:intergenic 30.0%
GTCTTACGTTGTAAAATAAG+AGG - chr5.4:72178821-72178840 MS.gene038326:intron 30.0%
GTTATATGATCCTGAAAAAG+AGG - chr5.4:72180752-72180771 MS.gene038326:intron 30.0%
TAAAGTTCAATCTCTTCATC+AGG + chr5.4:72180954-72180973 None:intergenic 30.0%
TAAGGAATGTTAGCATTAGA+GGG - chr5.4:72177680-72177699 MS.gene038326:intron 30.0%
TATATGTGATATGTAGGAAG+AGG - chr5.4:72179941-72179960 MS.gene038326:intron 30.0%
TATGTAATTGGCACCAATTT+AGG + chr5.4:72179021-72179040 None:intergenic 30.0%
TATGTTGCCTACAAAAAAAC+TGG - chr5.4:72179685-72179704 MS.gene038326:intron 30.0%
TATTGATGCTATGATAGATG+AGG - chr5.4:72181812-72181831 MS.gene038326:CDS 30.0%
TCTTCAATGCTTCATTATCT+TGG + chr5.4:72182202-72182221 None:intergenic 30.0%
TGAAGAGATTGAACTTTATG+AGG - chr5.4:72180956-72180975 MS.gene038326:CDS 30.0%
TGACATACTTTGACAATGAA+GGG + chr5.4:72179520-72179539 None:intergenic 30.0%
TTCAACCAAGTCTTCTTTAA+AGG + chr5.4:72181982-72182001 None:intergenic 30.0%
TTCTGATTTAAATTGCAGGT+TGG - chr5.4:72180500-72180519 MS.gene038326:intron 30.0%
TTTACTTGAATGATGTTTCG+TGG + chr5.4:72180636-72180655 None:intergenic 30.0%
! ACTACAACCAACATCTATTT+TGG + chr5.4:72179151-72179170 None:intergenic 30.0%
! CATCAATATCTTTCAAGTCT+AGG + chr5.4:72181800-72181819 None:intergenic 30.0%
! CTTTTAATAGTAGAGGAGAT+AGG - chr5.4:72177656-72177675 MS.gene038326:CDS 30.0%
! TATTGCCTTTAAAGAAGACT+TGG - chr5.4:72181974-72181993 MS.gene038326:intron 30.0%
! TCTTTCCCTTTTAATAGTAG+AGG - chr5.4:72177649-72177668 MS.gene038326:CDS 30.0%
! TGTTTGATGGTAAATGCTAA+GGG + chr5.4:72177985-72178004 None:intergenic 30.0%
! TTCAAGTTAAGCCTAGAAAA+AGG + chr5.4:72181409-72181428 None:intergenic 30.0%
! TTCAGATGTATTTGAAGTTG+GGG - chr5.4:72176927-72176946 MS.gene038326:CDS 30.0%
! TTGTTTGATGGTAAATGCTA+AGG + chr5.4:72177986-72178005 None:intergenic 30.0%
!! AAGCTTGTTAAGATTTCTGA+TGG + chr5.4:72180909-72180928 None:intergenic 30.0%
!! ATCGACAAAGTTTTATCAGA+AGG - chr5.4:72181849-72181868 MS.gene038326:CDS 30.0%
!! CTCTATTGTACTATTTCTGT+TGG - chr5.4:72178417-72178436 MS.gene038326:CDS 30.0%
!! TCGACAAAGTTTTATCAGAA+GGG - chr5.4:72181850-72181869 MS.gene038326:CDS 30.0%
!! TTTGGCTTGAAATACTCATA+AGG + chr5.4:72178362-72178381 None:intergenic 30.0%
!!! ATTTCTGATTGTTGGCTTTT+AGG - chr5.4:72180161-72180180 MS.gene038326:intron 30.0%
!!! CAACATCTATTTTGGTCTTT+TGG + chr5.4:72179143-72179162 None:intergenic 30.0%
!!! CTTTTTTTGAACTCTTTCCA+AGG - chr5.4:72177956-72177975 MS.gene038326:intron 30.0%
!!! GAAATTTTTTTTCGCTGTTC+AGG - chr5.4:72181431-72181450 MS.gene038326:intron 30.0%
!!! TCTAAACCCAGTTTTTTTGT+AGG + chr5.4:72179695-72179714 None:intergenic 30.0%
AAAATTTGTGGAAAGTCCCT+TGG - chr5.4:72179094-72179113 MS.gene038326:CDS 35.0%
AACTGGGTTTAGACTTTAGA+TGG - chr5.4:72179702-72179721 MS.gene038326:intron 35.0%
AATGAACAAGAAAGGGATTG+GGG - chr5.4:72178106-72178125 MS.gene038326:intron 35.0%
ACAGTTAAAAGTGGACATAG+AGG - chr5.4:72181560-72181579 MS.gene038326:intron 35.0%
ACATATCATCCTTTCCCTTA+TGG + chr5.4:72180719-72180738 None:intergenic 35.0%
AGAACTGAAAGTGGTAAACA+AGG - chr5.4:72180523-72180542 MS.gene038326:intron 35.0%
AGATTGACAGTTCATCAATG+AGG + chr5.4:72179194-72179213 None:intergenic 35.0%
AGGCAGAAAAAATTGAGCTA+TGG + chr5.4:72179372-72179391 None:intergenic 35.0%
AGGGAAACAGAATGTCTTAT+AGG + chr5.4:72179501-72179520 None:intergenic 35.0%
AGTTAACTTCAATGCAGTCA+AGG - chr5.4:72182028-72182047 MS.gene038326:intron 35.0%
AGTTGAAGTAACATGCAATG+TGG - chr5.4:72178207-72178226 MS.gene038326:CDS 35.0%
ATAGTAGAGGAGATAGGATA+AGG - chr5.4:72177662-72177681 MS.gene038326:intron 35.0%
ATATATGCAGCACTATCAAG+AGG - chr5.4:72180384-72180403 MS.gene038326:CDS 35.0%
ATTAGCAAGTGTATTCACCA+AGG + chr5.4:72179114-72179133 None:intergenic 35.0%
ATTATTTCAGGGGAATGTGT+AGG + chr5.4:72176978-72176997 None:intergenic 35.0%
ATTCTCCATGTGAATCGAAA+CGG + chr5.4:72176871-72176890 None:intergenic 35.0%
CAAAGATGAAGAATCATTGG+AGG - chr5.4:72181482-72181501 MS.gene038326:intron 35.0%
CAATGAACAAGAAAGGGATT+GGG - chr5.4:72178105-72178124 MS.gene038326:intron 35.0%
CAATGTGGATGAGAAAGATA+CGG - chr5.4:72178222-72178241 MS.gene038326:CDS 35.0%
CATCCAAATACATGGACAAA+TGG + chr5.4:72177208-72177227 None:intergenic 35.0%
CATGTTGAAAAGACCAATTC+TGG - chr5.4:72177381-72177400 MS.gene038326:CDS 35.0%
CCCTTTCTTGTTCATTGAAT+TGG + chr5.4:72178102-72178121 None:intergenic 35.0%
CTAGATAGAATCGACTAAGT+AGG + chr5.4:72177052-72177071 None:intergenic 35.0%
GAGATTGAACTTTATGAGGT+TGG - chr5.4:72180960-72180979 MS.gene038326:CDS 35.0%
GATGGAATTAACTGTTGTCT+TGG + chr5.4:72180294-72180313 None:intergenic 35.0%
GCCAACAATTCAAAATTCGT+CGG - chr5.4:72181609-72181628 MS.gene038326:intron 35.0%
GCGTAAAATTTGAATGAGCA+AGG + chr5.4:72177583-72177602 None:intergenic 35.0%
GGTTCTATCATGTTGTACTT+GGG - chr5.4:72179228-72179247 MS.gene038326:intron 35.0%
GTCTTGAACATCCAAATACA+TGG + chr5.4:72177216-72177235 None:intergenic 35.0%
TCAACACAACATAAACGAGA+GGG + chr5.4:72180225-72180244 None:intergenic 35.0%
TCAATGAACAAGAAAGGGAT+TGG - chr5.4:72178104-72178123 MS.gene038326:intron 35.0%
TCACCTCCACACTATTATAA+AGG - chr5.4:72178546-72178565 MS.gene038326:CDS 35.0%
TCACCTTTATAATAGTGTGG+AGG + chr5.4:72178552-72178571 None:intergenic 35.0%
TCTCCTTTCATCTTTGTTAC+CGG + chr5.4:72176598-72176617 None:intergenic 35.0%
TCTCGTCAATTAGAACAAGT+TGG - chr5.4:72182083-72182102 MS.gene038326:intron 35.0%
TGAATTGGAAAGTCATGAGA+AGG - chr5.4:72182484-72182503 MS.gene038326:CDS 35.0%
TGCAATAGCTGACTAAACAT+AGG + chr5.4:72178275-72178294 None:intergenic 35.0%
TGTAGCTCAACAGTTAAAAG+TGG - chr5.4:72181551-72181570 MS.gene038326:intron 35.0%
TTAACCCAGTAACTAACTAC+CGG + chr5.4:72179638-72179657 None:intergenic 35.0%
TTAGCAAGTGTATTCACCAA+GGG + chr5.4:72179113-72179132 None:intergenic 35.0%
TTCAACACAACATAAACGAG+AGG + chr5.4:72180226-72180245 None:intergenic 35.0%
TTCGATTCACATGGAGAATT+GGG - chr5.4:72176872-72176891 MS.gene038326:CDS 35.0%
TTTCCATCGAGTGATGATTA+TGG - chr5.4:72179593-72179612 MS.gene038326:intron 35.0%
TTTCGATTCACATGGAGAAT+TGG - chr5.4:72176871-72176890 MS.gene038326:CDS 35.0%
TTTGAAAAAAGAGCGAGACT+CGG - chr5.4:72182160-72182179 MS.gene038326:intron 35.0%
! AACTTGTTCTAATTGACGAG+AGG + chr5.4:72182084-72182103 None:intergenic 35.0%
! AATGAAGCTTGGTTTGACTT+TGG + chr5.4:72178380-72178399 None:intergenic 35.0%
! ACCTTCAATTTTCTTGCAAG+GGG - chr5.4:72179467-72179486 MS.gene038326:intron 35.0%
! ACTTAGTCGATTCTATCTAG+TGG - chr5.4:72177052-72177071 MS.gene038326:CDS 35.0%
! AGATGTTGGTTGTAGTGATA+AGG - chr5.4:72179155-72179174 MS.gene038326:intron 35.0%
! CACCTTCAATTTTCTTGCAA+GGG - chr5.4:72179466-72179485 MS.gene038326:intron 35.0%
! GTCTTTTCAACATGAATGCA+TGG + chr5.4:72177375-72177394 None:intergenic 35.0%
! TCAGATGTATTTGAAGTTGG+GGG - chr5.4:72176928-72176947 MS.gene038326:CDS 35.0%
! TCTTTGATTTCTTCATCCGA+TGG + chr5.4:72181468-72181487 None:intergenic 35.0%
! TGGTTCTATCATGTTGTACT+TGG - chr5.4:72179227-72179246 MS.gene038326:intron 35.0%
! TTCAGCGTTTTTGTCAACAT+TGG + chr5.4:72181700-72181719 None:intergenic 35.0%
! TTCCACAAATTTTGCAAGCT+GGG + chr5.4:72179087-72179106 None:intergenic 35.0%
! TTTCCACAAATTTTGCAAGC+TGG + chr5.4:72179088-72179107 None:intergenic 35.0%
!! AAGTGTTGAAGAGAAAATCC+CGG - chr5.4:72182451-72182470 MS.gene038326:intron 35.0%
!! ATGACATCTGCTTTTGAACA+TGG + chr5.4:72178769-72178788 None:intergenic 35.0%
!! CTTTCATTTTTGCATCCCAT+CGG + chr5.4:72181368-72181387 None:intergenic 35.0%
!! GGTTCGTGATGATTTTTCAA+CGG - chr5.4:72179875-72179894 MS.gene038326:intron 35.0%
!! GTGTGCTTATTTTCCCAAAA+GGG - chr5.4:72177168-72177187 MS.gene038326:CDS 35.0%
!!! ACCTTGTAGTTTTTCAAGCT+TGG + chr5.4:72182318-72182337 None:intergenic 35.0%
!!! GTTGGCTTTTAGGCAAATTT+TGG - chr5.4:72180171-72180190 MS.gene038326:intron 35.0%
!!! TTTTGAATTGTTGGCTTTGC+TGG + chr5.4:72181604-72181623 None:intergenic 35.0%
!!! TTTTTTTTTCCACTCTGAGC+AGG - chr5.4:72177144-72177163 MS.gene038326:CDS 35.0%
AAAATTGAGCTATGGCTCAC+AGG + chr5.4:72179364-72179383 None:intergenic 40.0%
AAATTGAGCTATGGCTCACA+GGG + chr5.4:72179363-72179382 None:intergenic 40.0%
AACATGTACTCTGTGAGAAG+AGG - chr5.4:72177305-72177324 MS.gene038326:CDS 40.0%
AACGGTGAAGAATCTTTGAC+AGG + chr5.4:72176853-72176872 None:intergenic 40.0%
AAGCCGGTAACAAAGATGAA+AGG - chr5.4:72176592-72176611 MS.gene038326:CDS 40.0%
ACAAGAAGAGGTCTCAAAAC+TGG - chr5.4:72181911-72181930 MS.gene038326:CDS 40.0%
ACATATGTTCTGGTAAACGG+TGG - chr5.4:72180807-72180826 MS.gene038326:intron 40.0%
ACGATACATCTCGTCCATTT+CGG - chr5.4:72180027-72180046 MS.gene038326:intron 40.0%
AGAAGGTCTACAGAATCTTC+AGG - chr5.4:72182501-72182520 MS.gene038326:CDS 40.0%
AGATACGGCTGAGCATATAA+CGG - chr5.4:72178237-72178256 MS.gene038326:CDS 40.0%
AGATGAAGACCTTGCAAAAC+AGG - chr5.4:72178691-72178710 MS.gene038326:intron 40.0%
AGTTATGCCTATTGTTGTGC+AGG - chr5.4:72181042-72181061 MS.gene038326:intron 40.0%
ATAGAGGCCACTAATGATGA+AGG - chr5.4:72181576-72181595 MS.gene038326:intron 40.0%
ATCCTGAAAAAGAGGAGCTA+AGG - chr5.4:72180760-72180779 MS.gene038326:intron 40.0%
ATGAACGCACATCAGGATAA+CGG + chr5.4:72181277-72181296 None:intergenic 40.0%
ATTTCAGGAGAAGTAACGGT+AGG + chr5.4:72176627-72176646 None:intergenic 40.0%
CAATTTACCGAGACGTATGA+AGG + chr5.4:72178140-72178159 None:intergenic 40.0%
CCATGAGTGCAGTTAGAAAA+TGG - chr5.4:72181200-72181219 MS.gene038326:intron 40.0%
CCTTCTCAACACTATTGTGA+AGG - chr5.4:72182118-72182137 MS.gene038326:intron 40.0%
CGATGGGATGCAAAAATGAA+AGG - chr5.4:72181366-72181385 MS.gene038326:intron 40.0%
GAAGATACTCGATGACATGA+AGG + chr5.4:72179432-72179451 None:intergenic 40.0%
GAAGGTCTACAGAATCTTCA+GGG - chr5.4:72182502-72182521 MS.gene038326:CDS 40.0%
GCATAACTACTCCAACCATT+GGG + chr5.4:72177251-72177270 None:intergenic 40.0%
GCCAAGCTTGAAAAACTACA+AGG - chr5.4:72182314-72182333 MS.gene038326:intron 40.0%
GCTAAACTAGTGTCTTTCCA+TGG - chr5.4:72177556-72177575 MS.gene038326:CDS 40.0%
GGACCATTTGTCCATGTATT+TGG - chr5.4:72177202-72177221 MS.gene038326:CDS 40.0%
GTAACCGGTAGTTAGTTACT+GGG - chr5.4:72179631-72179650 MS.gene038326:intron 40.0%
GTAATCTCCTGCACAACAAT+AGG + chr5.4:72181052-72181071 None:intergenic 40.0%
TAGCCATAATCATCACTCGA+TGG + chr5.4:72179599-72179618 None:intergenic 40.0%
TCAAAGTATGTCATCCGAGA+GGG - chr5.4:72179527-72179546 MS.gene038326:intron 40.0%
TCGATTCACATGGAGAATTG+GGG - chr5.4:72176873-72176892 MS.gene038326:CDS 40.0%
TCGTAGACTATGACAAAGTG+AGG - chr5.4:72178738-72178757 MS.gene038326:intron 40.0%
TCTTCATCCGATGGAGAAAA+AGG + chr5.4:72181459-72181478 None:intergenic 40.0%
TGCATAACTACTCCAACCAT+TGG + chr5.4:72177252-72177271 None:intergenic 40.0%
TGGGTTGCATGCAATTCTAA+TGG - chr5.4:72179247-72179266 MS.gene038326:intron 40.0%
TTAGCATTAGAGGGAGAGTT+GGG - chr5.4:72177689-72177708 MS.gene038326:intron 40.0%
TTATTGCACATATCTGCTCC+CGG + chr5.4:72178960-72178979 None:intergenic 40.0%
TTCACTTCCTTCATACGTCT+CGG - chr5.4:72178130-72178149 MS.gene038326:intron 40.0%
TTCCCAGCTTGCAAAATTTG+TGG - chr5.4:72179082-72179101 MS.gene038326:CDS 40.0%
TTGAAGTTGGGGGTTACAAA+TGG - chr5.4:72176938-72176957 MS.gene038326:CDS 40.0%
TTTGATCATTAGCGAGACGA+TGG + chr5.4:72182421-72182440 None:intergenic 40.0%
! ACATTCATCCACTAGCTTCA+AGG + chr5.4:72179056-72179075 None:intergenic 40.0%
! ACTTTCCAACCTGTTTTGCA+AGG + chr5.4:72178703-72178722 None:intergenic 40.0%
! AGGCAATTAGTTTAGTCCGA+TGG - chr5.4:72181349-72181368 MS.gene038326:intron 40.0%
! CATTCATCCACTAGCTTCAA+GGG + chr5.4:72179055-72179074 None:intergenic 40.0%
! CCATTTTCTAACTGCACTCA+TGG + chr5.4:72181203-72181222 None:intergenic 40.0%
! CCTTCACAATAGTGTTGAGA+AGG + chr5.4:72182121-72182140 None:intergenic 40.0%
! GCACCTTCAATTTTCTTGCA+AGG - chr5.4:72179465-72179484 MS.gene038326:intron 40.0%
! GCCGACGAATTTTGAATTGT+TGG + chr5.4:72181613-72181632 None:intergenic 40.0%
! GGAAAGACACTAGTTTAGCA+AGG + chr5.4:72177555-72177574 None:intergenic 40.0%
! GGCAATTAGTTTAGTCCGAT+GGG - chr5.4:72181350-72181369 MS.gene038326:intron 40.0%
! TACCTTAGCTCCTCTTTTTC+AGG + chr5.4:72180765-72180784 None:intergenic 40.0%
! TAGTCGATTCTATCTAGTGG+CGG - chr5.4:72177055-72177074 MS.gene038326:CDS 40.0%
! TCAGGTTCCTTTTTCTCCAT+CGG - chr5.4:72181449-72181468 MS.gene038326:intron 40.0%
! TTGTGTTTGGTGGTTTGTGA+GGG + chr5.4:72182258-72182277 None:intergenic 40.0%
! TTTTCTTGCAAGGGGCTTAT+TGG - chr5.4:72179475-72179494 MS.gene038326:intron 40.0%
!! CGTGTGCTTATTTTCCCAAA+AGG - chr5.4:72177167-72177186 MS.gene038326:CDS 40.0%
!!! TGAAGGTGCTGCATGTTTTT+GGG + chr5.4:72179454-72179473 None:intergenic 40.0%
!!! TTGAAGGTGCTGCATGTTTT+TGG + chr5.4:72179455-72179474 None:intergenic 40.0%
!!! TTGTTTTTGGAAGTGGAGCA+TGG - chr5.4:72180566-72180585 MS.gene038326:intron 40.0%
AACTGGCAAAAGTGGACACA+GGG - chr5.4:72181724-72181743 MS.gene038326:intron 45.0%
ACAACGCGTTTATGCAGAAG+AGG - chr5.4:72178470-72178489 MS.gene038326:intron 45.0%
AGGTCGAAGAAAGAACTCAG+TGG - chr5.4:72178490-72178509 MS.gene038326:intron 45.0%
ATCTTGGTCAGTGCTCTTCT+TGG + chr5.4:72182186-72182205 None:intergenic 45.0%
ATGTCATCCGAGAGGGATTT+GGG - chr5.4:72179534-72179553 MS.gene038326:intron 45.0%
ATTTGAATGAGCAAGGGCCA+TGG + chr5.4:72177576-72177595 None:intergenic 45.0%
CAAAAACGCTGAAGCTCAAC+TGG - chr5.4:72181707-72181726 MS.gene038326:intron 45.0%
CAAGAGAGTTGCGTTGTGTT+TGG + chr5.4:72182271-72182290 None:intergenic 45.0%
CAATCTCAGCATTCCGTCAA+AGG - chr5.4:72181888-72181907 MS.gene038326:CDS 45.0%
CCAGCATAACTGCCATAGAA+GGG + chr5.4:72180858-72180877 None:intergenic 45.0%
CCCAAAAGGGAACAATGTGA+CGG - chr5.4:72177181-72177200 MS.gene038326:CDS 45.0%
CGATTCACATGGAGAATTGG+GGG - chr5.4:72176874-72176893 MS.gene038326:CDS 45.0%
CTTCACCGTTTCGATTCACA+TGG - chr5.4:72176863-72176882 MS.gene038326:CDS 45.0%
GAAGACCTTGCAAAACAGGT+TGG - chr5.4:72178695-72178714 MS.gene038326:intron 45.0%
GACCTCTTCTTGTCCTTTGA+CGG + chr5.4:72181904-72181923 None:intergenic 45.0%
GCCCCTTGCAAGAAAATTGA+AGG + chr5.4:72179471-72179490 None:intergenic 45.0%
GCTGGTACCTTCATCATTAG+TGG + chr5.4:72181586-72181605 None:intergenic 45.0%
GGAATATGTGCACAATCTCC+AGG - chr5.4:72181301-72181320 MS.gene038326:intron 45.0%
GGTAACCGGTAGTTAGTTAC+TGG - chr5.4:72179630-72179649 MS.gene038326:intron 45.0%
GGTGATGCATGTCTACATAG+TGG + chr5.4:72178081-72178100 None:intergenic 45.0%
GTAAATGCTAAGGGTTGCCT+TGG + chr5.4:72177976-72177995 None:intergenic 45.0%
GTCAAAGTATGTCATCCGAG+AGG - chr5.4:72179526-72179545 MS.gene038326:intron 45.0%
GTTAGCATTAGAGGGAGAGT+TGG - chr5.4:72177688-72177707 MS.gene038326:intron 45.0%
GTTTGTGAGGGAAGTCTTTG+AGG + chr5.4:72182246-72182265 None:intergenic 45.0%
TAGCATTAGAGGGAGAGTTG+GGG - chr5.4:72177690-72177709 MS.gene038326:intron 45.0%
TATGTCATCCGAGAGGGATT+TGG - chr5.4:72179533-72179552 MS.gene038326:intron 45.0%
TCATCCTTTCCCTTATGGAG+AGG + chr5.4:72180714-72180733 None:intergenic 45.0%
TCCAAGTATGAACGCACATC+AGG + chr5.4:72181284-72181303 None:intergenic 45.0%
TCCAGCATAACTGCCATAGA+AGG + chr5.4:72180859-72180878 None:intergenic 45.0%
TCCTGATGTGCGTTCATACT+TGG - chr5.4:72181280-72181299 MS.gene038326:intron 45.0%
TCTATGGCAGTTATGCTGGA+AGG - chr5.4:72180859-72180878 MS.gene038326:intron 45.0%
TGAAGCTCAACTGGCAAAAG+TGG - chr5.4:72181716-72181735 MS.gene038326:intron 45.0%
TGTTACGGGCAAATGAAGCT+TGG + chr5.4:72178391-72178410 None:intergenic 45.0%
TGTTGAAGAGAAAATCCCGG+AGG - chr5.4:72182454-72182473 MS.gene038326:intron 45.0%
TTCCGTCAAAGGACAAGAAG+AGG - chr5.4:72181899-72181918 MS.gene038326:CDS 45.0%
! AGCTCAATTCCAGCGCTTTT+GGG - chr5.4:72179986-72180005 MS.gene038326:intron 45.0%
! CAGCTAATTTGCCCAATGGT+TGG - chr5.4:72177237-72177256 MS.gene038326:CDS 45.0%
! CCGTCACATTGTTCCCTTTT+GGG + chr5.4:72177184-72177203 None:intergenic 45.0%
! GACTCAGCTAATTTGCCCAA+TGG - chr5.4:72177233-72177252 MS.gene038326:CDS 45.0%
! GGAGAATTGGGGGATTTTCT+TGG - chr5.4:72176884-72176903 MS.gene038326:CDS 45.0%
! GTTGTGTTTGGTGGTTTGTG+AGG + chr5.4:72182259-72182278 None:intergenic 45.0%
! TCCGTCACATTGTTCCCTTT+TGG + chr5.4:72177185-72177204 None:intergenic 45.0%
!! ATTCCAGCGCTTTTGGGTAT+TGG - chr5.4:72179992-72180011 MS.gene038326:intron 45.0%
!! GAGAGAGAGGCATCTTGTTA+AGG - chr5.4:72177867-72177886 MS.gene038326:CDS 45.0%
!!! GCTGATGTTTTGAGAAGAGC+TGG + chr5.4:72181778-72181797 None:intergenic 45.0%
AAACGCTCCCTTGAAGCTAG+TGG - chr5.4:72179045-72179064 MS.gene038326:intron 50.0%
AACTCCTGAAGCAGTTGCGT+AGG + chr5.4:72181948-72181967 None:intergenic 50.0%
ACAACCCACCACAATCATGC+AGG + chr5.4:72177507-72177526 None:intergenic 50.0%
ACAGGCTCACACAAGACAGT+TGG + chr5.4:72181082-72181101 None:intergenic 50.0%
ACCTGAAACTCCCAACACTG+TGG - chr5.4:72176819-72176838 MS.gene038326:CDS 50.0%
ACTCCTGAAGCAGTTGCGTA+GGG + chr5.4:72181947-72181966 None:intergenic 50.0%
AGAAGCCTGCATGATTGTGG+TGG - chr5.4:72177499-72177518 MS.gene038326:CDS 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr5.4:72177800-72177819 MS.gene038326:intron 50.0%
AGGCTGACTATCCACAGTGT+TGG + chr5.4:72176833-72176852 None:intergenic 50.0%
AGGCTTCTCAGAGGAAGTTG+TGG + chr5.4:72177487-72177506 None:intergenic 50.0%
CAACTGGCAAAAGTGGACAC+AGG - chr5.4:72181723-72181742 MS.gene038326:intron 50.0%
CAATCATGCAGGCTTCTCAG+AGG + chr5.4:72177496-72177515 None:intergenic 50.0%
CAGTTGCAGCGAGACAGATA+AGG + chr5.4:72176693-72176712 None:intergenic 50.0%
CCCATTGAGCCTCTCCATAA+GGG - chr5.4:72180702-72180721 MS.gene038326:intron 50.0%
CCCTTATGGAGAGGCTCAAT+GGG + chr5.4:72180705-72180724 None:intergenic 50.0%
CCCTTCTATGGCAGTTATGC+TGG - chr5.4:72180855-72180874 MS.gene038326:intron 50.0%
CTGAGAAGCCTGCATGATTG+TGG - chr5.4:72177496-72177515 MS.gene038326:CDS 50.0%
GAAGCCTGCATGATTGTGGT+GGG - chr5.4:72177500-72177519 MS.gene038326:CDS 50.0%
GAGAGTTGCGTTGTGTTTGG+TGG + chr5.4:72182268-72182287 None:intergenic 50.0%
GCAACTGCTTCAGGAGTTGA+GGG - chr5.4:72181950-72181969 MS.gene038326:intron 50.0%
GCTGGAACCTTCATTGTGAG+CGG + chr5.4:72181751-72181770 None:intergenic 50.0%
GGCTGACTATCCACAGTGTT+GGG + chr5.4:72176832-72176851 None:intergenic 50.0%
GGTTGCAAGATCAAGTGCAG+AGG + chr5.4:72179392-72179411 None:intergenic 50.0%
TCCAATTCAGTTTGCGCCTC+CGG + chr5.4:72182473-72182492 None:intergenic 50.0%
TCCCATTGAGCCTCTCCATA+AGG - chr5.4:72180701-72180720 MS.gene038326:intron 50.0%
TCCCTTATGGAGAGGCTCAA+TGG + chr5.4:72180706-72180725 None:intergenic 50.0%
TGACACGCATTGAGGAAGCA+GGG - chr5.4:72180054-72180073 MS.gene038326:intron 50.0%
TGAGCCTCTCCATAAGGGAA+AGG - chr5.4:72180707-72180726 MS.gene038326:intron 50.0%
TTTGGAAGTGGAGCATGGAC+CGG - chr5.4:72180571-72180590 MS.gene038326:intron 50.0%
! ACAGGGTCTGTGAGGTGTTA+TGG + chr5.4:72179346-72179365 None:intergenic 50.0%
! CAGCTCAATTCCAGCGCTTT+TGG - chr5.4:72179985-72180004 MS.gene038326:intron 50.0%
! GCAGGTTGGAGAACTGAAAG+TGG - chr5.4:72180514-72180533 MS.gene038326:intron 50.0%
! TCCACAGTGTTGGGAGTTTC+AGG + chr5.4:72176823-72176842 None:intergenic 50.0%
! TTGCCAATACCCAAAAGCGC+TGG + chr5.4:72179998-72180017 None:intergenic 50.0%
!! CAAAAGCGCTGGAATTGAGC+TGG + chr5.4:72179987-72180006 None:intergenic 50.0%
!! TTGAGAAGAGCTGGCTTTGC+TGG + chr5.4:72181769-72181788 None:intergenic 50.0%
ACAGGGACCGCTCACAATGA+AGG - chr5.4:72181741-72181760 MS.gene038326:intron 55.0%
CCAATTCAGTTTGCGCCTCC+GGG + chr5.4:72182472-72182491 None:intergenic 55.0%
CCCACTTCCCAAATCCCTCT+CGG + chr5.4:72179544-72179563 None:intergenic 55.0%
CCGAGAGGGATTTGGGAAGT+GGG - chr5.4:72179541-72179560 MS.gene038326:intron 55.0%
CGCAACTGCTTCAGGAGTTG+AGG - chr5.4:72181949-72181968 MS.gene038326:intron 55.0%
CTGACACGCATTGAGGAAGC+AGG - chr5.4:72180053-72180072 MS.gene038326:intron 55.0%
GCTTCCTCAATGCGTGTCAG+CGG + chr5.4:72180053-72180072 None:intergenic 55.0%
TATGGCTCACAGGGTCTGTG+AGG + chr5.4:72179354-72179373 None:intergenic 55.0%
TCCGAGAGGGATTTGGGAAG+TGG - chr5.4:72179540-72179559 MS.gene038326:intron 55.0%
TTGACGAGAGGTGAACGCGT+CGG + chr5.4:72182072-72182091 None:intergenic 55.0%
AAGCACACGCCTGCTCAGAG+TGG + chr5.4:72177156-72177175 None:intergenic 60.0%
AAGCAGTTGCGTAGGGAGGC+TGG + chr5.4:72181940-72181959 None:intergenic 60.0%
AGCAGTTGCGTAGGGAGGCT+GGG + chr5.4:72181939-72181958 None:intergenic 60.0%
ATGCGTGTCAGCGGCCGAAA+TGG + chr5.4:72180044-72180063 None:intergenic 60.0%
CCTCCCTACGCAACTGCTTC+AGG - chr5.4:72181941-72181960 MS.gene038326:CDS 60.0%
CCTGAAGCAGTTGCGTAGGG+AGG + chr5.4:72181944-72181963 None:intergenic 60.0%
! CCCGGAGGCGCAAACTGAAT+TGG - chr5.4:72182469-72182488 MS.gene038326:CDS 60.0%
TCGGCCGCTGACACGCATTG+AGG - chr5.4:72180046-72180065 MS.gene038326:intron 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 72176588 72182541 72176588 ID=MS.gene038326
chr5.4 mRNA 72176588 72182541 72176588 ID=MS.gene038326.t1;Parent=MS.gene038326
chr5.4 exon 72182457 72182541 72182457 ID=MS.gene038326.t1.exon1;Parent=MS.gene038326.t1
chr5.4 CDS 72182457 72182541 72182457 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
chr5.4 exon 72182170 72182320 72182170 ID=MS.gene038326.t1.exon2;Parent=MS.gene038326.t1
chr5.4 CDS 72182170 72182320 72182170 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
chr5.4 exon 72181803 72181963 72181803 ID=MS.gene038326.t1.exon3;Parent=MS.gene038326.t1
chr5.4 CDS 72181803 72181963 72181803 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
chr5.4 exon 72180871 72181040 72180871 ID=MS.gene038326.t1.exon4;Parent=MS.gene038326.t1
chr5.4 CDS 72180871 72181040 72180871 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
chr5.4 exon 72180327 72180446 72180327 ID=MS.gene038326.t1.exon5;Parent=MS.gene038326.t1
chr5.4 CDS 72180327 72180446 72180327 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
chr5.4 exon 72179050 72179172 72179050 ID=MS.gene038326.t1.exon6;Parent=MS.gene038326.t1
chr5.4 CDS 72179050 72179172 72179050 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
chr5.4 exon 72178537 72178611 72178537 ID=MS.gene038326.t1.exon7;Parent=MS.gene038326.t1
chr5.4 CDS 72178537 72178611 72178537 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
chr5.4 exon 72178348 72178436 72178348 ID=MS.gene038326.t1.exon8;Parent=MS.gene038326.t1
chr5.4 CDS 72178348 72178436 72178348 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
chr5.4 exon 72178152 72178260 72178152 ID=MS.gene038326.t1.exon9;Parent=MS.gene038326.t1
chr5.4 CDS 72178152 72178260 72178152 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
chr5.4 exon 72177997 72178065 72177997 ID=MS.gene038326.t1.exon10;Parent=MS.gene038326.t1
chr5.4 CDS 72177997 72178065 72177997 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
chr5.4 exon 72177807 72177917 72177807 ID=MS.gene038326.t1.exon11;Parent=MS.gene038326.t1
chr5.4 CDS 72177807 72177917 72177807 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
chr5.4 exon 72176588 72177676 72176588 ID=MS.gene038326.t1.exon12;Parent=MS.gene038326.t1
chr5.4 CDS 72176588 72177676 72176588 ID=cds.MS.gene038326.t1;Parent=MS.gene038326.t1
Gene Sequence

>MS.gene038326

ATGGAAGCCGGTAACAAAGATGAAAGGAGAACTTCTCCTACCGTTACTTCTCCTGAAATTAAGAAAAGAAAGATAACACATAGAGGTAATCAAGGCATGATACCTTATCTGTCTCGCTGCAACTGTAGAACAACGCTTATCTGTTTTACCTCTCCAAGTTTTTCACTTAATTTAAGGCATGATACTTAACTTCTCTTTTAATTTATATTGACGAACATTAGTTTCTGTTCAACCTGAAACTCCCAACACTGTGGATAGTCAGCCTGTCAAAGATTCTTCACCGTTTCGATTCACATGGAGAATTGGGGGATTTTCTTGGATAAATACGATAAAGCTCTATTCAGATGTATTTGAAGTTGGGGGTTACAAATGGTATTGTGCTTACTGCCTACACATTCCCCTGAAATAATATTCATAATGTTCATCTTTCTATTTCAGTAGAAGTGAATCGTTTCGTTTGACCTACTTAGTCGATTCTATCTAGTGGCGGAAGTAATTTTGTTGTAGCTGTCATATTAGTTCCTATGTGTATATAACTTCAGTGTTGCCTTCTAATTTTTTTTTTCCACTCTGAGCAGGCGTGTGCTTATTTTCCCAAAAGGGAACAATGTGACGGACCATTTGTCCATGTATTTGGATGTTCAAGACTCAGCTAATTTGCCCAATGGTTGGAGTAGTTATGCACAGTTTAGCTTGACAGTAGTTAATCAAATGAACAACATGTACTCTGTGAGAAGAGGTACCCTATTTAGTCTGTTCATTACAATTGTTACAAAATGAACTACCATGCATTCATGTTGAAAAGACCAATTCTGGAATTAAAAGCAAAGAATGTTGTAAGATGTTTGTTGCATTTACTGAAAGAGAAATTTTATTTTTGAAAAAGTCAACTTGCACCACAACTTCCTCTGAGAAGCCTGCATGATTGTGGTGGGTTGTTTTATGATTAACCAATAATTTGTTACCTTGCTAAACTAGTGTCTTTCCATGGCCCTTGCTCATTCAAATTTTACGCCATTAAACTTTTCTACTGAACTTGAAGCTACCACTTGTATATGTATTCTTTCCCTTTTAATAGTAGAGGAGATAGGATAAGGAATGTTAGCATTAGAGGGAGAGTTGGGGTAGCACCTACAGTTTGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGCATCTTGTTAAGGTTAAAATAAACAAAAAGTATCTAATGCATGCAATTTAATGCATTGAGAACTTAGAAATTTTAACTTCTTTTTTTGAACTCTTTCCAAGGCAACCCTTAGCATTTACCATCAAACAAAATGAAAGAGAAAATAGAAACTGAAAATGCACATAATTTTTGGGCATAGCTGCATTATTTGTGACTTTGTTTCCACTATGTAGACATGCATCACCAATTCAATGAACAAGAAAGGGATTGGGGTTTCACTTCCTTCATACGTCTCGGTAAATTGCATGATCTTCGTAAAGGGTATCTTATGAATGATACTCTTGTAGTTGAAGTTGAAGTAACATGCAATGTGGATGAGAAAGATACGGCTGAGCATATAACGGTAAGTAAATATTCCTATGTTTAGTCAGCTATTGCAATCAACTCGATGACTGTTCTTGTCCGAAACACTGTCATTTTTTATATGTTTCTCATGAGTAGTTCCTTATGAGTATTTCAAGCCAAAGTCAAACCAAGCTTCATTTGCCCGTAACATTCAATCTCTATTGTACTATTTCTGTTGGTTTATTCTGAAATATTTGCACTGGATTTATACAACGCGTTTATGCAGAAGAGGTCGAAGAAAGAACTCAGTGGAAAAAAGCACAAAAATAAAGAAAAGGAAGAGACTCACCTCCACACTATTATAAAGGTGATCTAAGCTTGCTTCCTTAGATATTTGTTTTGTTTGTATCTTTAGAAACATGCTGTTAACAGCTCAATTAGATTGTATTTATATTTATACTGATAATAAAAAATATTCTCAGGTTGTACGAGATGAAGACCTTGCAAAACAGGTTGGAAAGTATATATATTTTGATCTCGTAGACTATGACAAAGTGAGGAGTTTCCATGTTCAAAAGCAGATGTCATTTAACATTTTCAAGGTATCATCATCAGTTACAGTCTTACGTTGTAAAATAAGAGGAAATCTGAATCTTGTCAATTGAGGATTGATGTACAAGCACTAATGTGATTATATAGAATAAGCCTAATAAAACTTAATAAAGTACCCCTAAAAAAAATCTTAATAAAGAAAAACCGGGAGCAGATATGTGCAATAATGACAGATACGACTAAATACGCACCGAGAATATTCTATCCTAAATTGGTGCCAATTACATATTTAAAACGCTCCCTTGAAGCTAGTGGATGAATGTCGAACATTCCCAGCTTGCAAAATTTGTGGAAAGTCCCTTGGTGAATACACTTGCTAATTGAAGTCCAAAAGACCAAAATAGATGTTGGTTGTAGTGATAAGGTCATTATTTAATTCCTCATTGATGAACTGTCAATCTATCTATATGTGTTTGGTTCTATCATGTTGTACTTGGGTTGCATGCAATTCTAATGGAAGAAATTTTATCACAGATAAGCCTCATATGATATTTGTACTTTATTTCGAGGTTATCAAGTATGATCTTCGTCCATAACACCTCACAGACCCTGTGAGCCATAGCTCAATTTTTTCTGCCTCTGCACTTGATCTTGCAACCACATTTAGCATTTTACTCCTTCATGTCATCGAGTATCTTCCCAAAAACATGCAGCACCTTCAATTTTCTTGCAAGGGGCTTATTGGCCTATAAGACATTCTGTTTCCCTTCATTGTCAAAGTATGTCATCCGAGAGGGATTTGGGAAGTGGGAATATTGATAACGTCATTGCAACTTCAATTTTCCATCGAGTGATGATTATGGCTAGTAATATGATAGGTAACCGGTAGTTAGTTACTGGGTTAATTAGGTACTTAGTTAGGCCCAATAAATTATGTTGCCTACAAAAAAACTGGGTTTAGACTTTAGATGGAGATACATCCTTATAGAAAACAATTATTTTAAAATCAATACTTAAATATAAAATCATGATGCTTTAATTAGTTGGAAGAGGAAACAATTGCCATATGAATATTTGTGGTGTTTATGCTCTTGATTTTATGATTTGTTATATAATTTATGAGGTTCGTGATGATTTTTCAACGGATGTATTATTTTTGTATGTTTGATTTTTCTGTTTTATTGCTAATATATGTGATATGTAGGAAGAGGTTGCTATAGAGTTTTGCATACCAGCTCAATTCCAGCGCTTTTGGGTATTGGCAAAGCGTGAAAACGATACATCTCGTCCATTTCGGCCGCTGACACGCATTGAGGAAGCAGGGCCTGTAAATTCATAAGATCTCTTGAAGCTTATCAATATTATTTTATTGACATACCCCTTCAACTTCTCATATAATGACTTTTTCATTTCTGATTGTTGGCTTTTAGGCAAATTTTGGATTTGTATAAAAAAAACTCAGCTTCTTTCCCTCTCGTTTATGTTGTGTTGAATTTGTTCATGACATGTTATATCAATCTACTATTTCATGTTTTGGGCCAAGACAACAGTTAATTCCATCTATCTTAGCTTTGTTTATTTTTACTTTTTTATTTTGCCATTTCGACTACCTTCTTTTATATCTTTATAATATATATGCAGCACTATCAAGAGGTTTTCATATTGATTGTTTTGGATCCTATAGTTTTTTCTTTGTAACGCAGTACACCAATTTATCTATGATTTGAAGTTTATTTTTTTCCTCTCATTCTGATTTAAATTGCAGGTTGGAGAACTGAAAGTGGTAAACAAGGTTCACAAAGCAGAATTAAAATTGTTTTTGGAAGTGGAGCATGGACCGGTAACATTTATATTATGAAGTTGTATACTATATTTTGATACCACGAAACATCATTCAAGTAAAATCCTATATATGATTGACAAACTGCATTATTATATAGGATTTGTGTCCCATTGAGCCTCTCCATAAGGGAAAGGATGATATGTTACTTTTTTTCAAGTTATATGATCCTGAAAAAGAGGAGCTAAGGTACTGAATAATTTATTGTGATTTAACATATGTTCTGGTAAACGGTGGACCTTAGTTGATACTAAATGTATTTCCCTTCTATGGCAGTTATGCTGGAAGGCTCTTTGTGAACTGTACTCATAAGCCATCAGAAATCTTAACAAGCTTAAATAAATTGGCTGGCTATGATCCTGATGAAGAGATTGAACTTTATGAGGTTGGTTTGTTTTTTCTGATTTATTATTTATCTGTTGTACAACATATTTGTCGAGTTACGAGTTAGTTATGCCTATTGTTGTGCAGGAGATTACGTCTGTACCAACTGTCTTGTGTGAGCCTGTTGACAAGAAATTAACATTTCAAGAAAGTGAGGTATAACACATACCCAGTTAATGTACACTAAGTTACTGCACCATTTGTTTTCTTATTGATTTATTTTCCATGAGTGCAGTTAGAAAATGGTGATATTATATGCTTTCAGAAGGCTTCTAAAATGAATAACGAGAAGCATTTCCGTTATCCTGATGTGCGTTCATACTTGGAATATGTGCACAATCTCCAGGTATTTCCTTTTTGATGTTTAATTAAAGGCAATTAGTTTAGTCCGATGGGATGCAAAAATGAAAGGTACCCATTTATTCTTATCCTTTTTCTAGGCTTAACTTGAACTGAAATTTTTTTTCGCTGTTCAGGTTCCTTTTTCTCCATCGGATGAAGAAATCAAAGATGAAGAATCATTGGAGGAGCAAAACAAAAACATTTTAGGAGAAGAAACAAATGTTGATAAAAATGTAGCTCAACAGTTAAAAGTGGACATAGAGGCCACTAATGATGAAGGTACCAGCAAAGCCAACAATTCAAAATTCGTCGGCATAGACTTTGAAAAAATTAATGATATGATACTTGAGGAGTTGAGAATATCATTGCTTCAACAAACCAATGTTGACAAAAACGCTGAAGCTCAACTGGCAAAAGTGGACACAGGGACCGCTCACAATGAAGGTTCCAGCAAAGCCAGCTCTTCTCAAAACATCAGCCTAGACTTGAAAGATATTGATGCTATGATAGATGAGGATGTCATTGCTGCAATCGACAAAGTTTTATCAGAAGGGAATACTATTTCATTACAATCTCAGCATTCCGTCAAAGGACAAGAAGAGGTCTCAAAACTGGATCCCAGCCTCCCTACGCAACTGCTTCAGGAGTTGAGGGATATTGCCTTTAAAGAAGACTTGGTTGAAAAATTTAAAGAAGGTATCACTCCTAAAGTTAACTTCAATGCAGTCAAGGAAAAAATTGACGCTAATGCCGACGCGTTCACCTCTCGTCAATTAGAACAAGTTGGTGTTGTTGTCGACCTTCTCAACACTATTGTGAAGGTGTTTGAGCAACTAAAAAATTTGAAAAAAGAGCGAGACTCGGCCAAGAAGAGCACTGACCAAGATAATGAAGCATTGAAGAAGACGAGACAAAAAATATTGACCTCAAAGACTTCCCTCACAAACCACCAAACACAACGCAACTCTCTTGATGCTCAAATTGCTGATCTTAAAGCCAAGCTTGAAAAACTACAAGGTGACAGAGCCAAAATTGATGAGATTGAAGATCAAGAGAAAGATAAGATCACATCTTTTCACAAAGAAGTTAAATCAATTTTCCATCGTCTCGCTAATGATCAAATCAAATTGAAAAGTGTTGAAGAGAAAATCCCGGAGGCGCAAACTGAATTGGAAAGTCATGAGAAGGTCTACAGAATCTTCAGGGCAATCCCTCCATTTTGA
Protein sequence

>MS.gene038326.t1

MEAGNKDERRTSPTVTSPEIKKRKITHRVSVQPETPNTVDSQPVKDSSPFRFTWRIGGFSWINTIKLYSDVFEVGGYKWRVLIFPKGNNVTDHLSMYLDVQDSANLPNGWSSYAQFSLTVVNQMNNMYSVRRDMHHQFNEQERDWGFTSFIRLGKLHDLRKGYLMNDTLVVEVEVTCNVDEKDTAEHITVVRDEDLAKQVGKYIYFDLVDYDKVRSFHVQKQMSFNIFKEEVAIEFCIPAQFQRFWVLAKRENDTSRPFRPLTRIEEAGPVGELKVVNKVHKAELKLFLEVEHGPDLCPIEPLHKGKDDMLLFFKLYDPEKEELSYAGRLFVNCTHKPSEILTSLNKLAGYDPDEEIELYEEITSVPTVLCEPVDKKLTFQESELENGDIICFQKASKMNNEKHFRYPDVRSYLEYVHNLQVPFSPSDEEIKDEESLEEQNKNILGEETNVDKNVAQQLKVDIEATNDEGTSKANNSKFVGIDFEKINDMILEELRISLLQQTNVDKNAEAQLAKVDTGTAHNEGSSKASSSQNISLDLKDIDAMIDEDVIAAIDKVLSEGNTISLQSQHSVKGQEEVSKLDPSLPTQLLQELRDIAFKEDLVEKFKEGITPKVNFNAVKEKIDANADAFTSRQLEQVGVVVDLLNTIVKVFEQLKNLKKERDSAKKSTDQDNEALKKTRQKILTSKTSLTNHQTQRNSLDAQIADLKAKLEKLQGDRAKIDEIEDQEKDKITSFHKEVKSIFHRLANDQIKLKSVEEKIPEAQTELESHEKVYRIFRAIPPF