Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030037.t1 | AET00387.2 | 31.8 | 790 | 209 | 8 | 12 | 473 | 5 | 792 | 9.90E-79 | 304.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030037.t1 | Q9FPT1 | 64.1 | 131 | 46 | 1 | 38 | 167 | 56 | 186 | 5.0e-47 | 190.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030037.t1 | G7KD59 | 31.8 | 790 | 209 | 8 | 12 | 473 | 5 | 792 | 7.1e-79 | 304.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030037.t1 | MTR_5g091430 | 73.737 | 297 | 75 | 2 | 180 | 473 | 254 | 550 | 8.78e-143 | 420 |
MS.gene030037.t1 | MTR_5g091450 | 73.741 | 278 | 72 | 1 | 197 | 473 | 515 | 792 | 5.44e-132 | 400 |
MS.gene030037.t1 | MTR_5g091450 | 55.435 | 184 | 69 | 5 | 1 | 180 | 1 | 175 | 3.48e-57 | 202 |
MS.gene030037.t1 | MTR_5g091180 | 72.075 | 265 | 61 | 3 | 188 | 446 | 445 | 702 | 8.91e-112 | 346 |
MS.gene030037.t1 | MTR_5g091180 | 51.256 | 199 | 84 | 6 | 7 | 194 | 7 | 203 | 5.55e-53 | 190 |
MS.gene030037.t1 | MTR_5g091410 | 61.207 | 232 | 79 | 3 | 242 | 473 | 329 | 549 | 1.05e-76 | 250 |
MS.gene030037.t1 | MTR_5g086700 | 64.901 | 151 | 48 | 2 | 22 | 167 | 41 | 191 | 3.38e-61 | 216 |
MS.gene030037.t1 | MTR_5g086700 | 64.901 | 151 | 48 | 2 | 22 | 167 | 41 | 191 | 3.50e-61 | 216 |
MS.gene030037.t1 | MTR_3g079840 | 62.745 | 153 | 50 | 2 | 22 | 167 | 34 | 186 | 2.14e-59 | 211 |
MS.gene030037.t1 | MTR_3g079840 | 62.745 | 153 | 50 | 2 | 22 | 167 | 35 | 187 | 2.25e-59 | 211 |
MS.gene030037.t1 | MTR_1g041240 | 53.846 | 156 | 68 | 3 | 13 | 167 | 35 | 187 | 1.16e-50 | 186 |
MS.gene030037.t1 | MTR_1g041240 | 56.757 | 148 | 56 | 3 | 27 | 167 | 42 | 188 | 1.99e-50 | 185 |
MS.gene030037.t1 | MTR_1g041240 | 56.757 | 148 | 56 | 3 | 27 | 167 | 40 | 186 | 2.10e-50 | 185 |
MS.gene030037.t1 | MTR_5g091550 | 46.073 | 191 | 81 | 5 | 3 | 191 | 2 | 172 | 8.76e-44 | 160 |
MS.gene030037.t1 | MTR_5g091550 | 44.898 | 196 | 81 | 6 | 3 | 191 | 2 | 177 | 1.88e-41 | 154 |
MS.gene030037.t1 | MTR_5g091530 | 55.652 | 115 | 47 | 3 | 80 | 192 | 4 | 116 | 9.03e-29 | 117 |
MS.gene030037.t1 | MTR_1g042160 | 33.333 | 180 | 113 | 3 | 38 | 214 | 13 | 188 | 1.11e-28 | 115 |
MS.gene030037.t1 | MTR_7g107200 | 36.434 | 129 | 78 | 3 | 38 | 162 | 13 | 141 | 2.00e-23 | 102 |
MS.gene030037.t1 | MTR_1g044450 | 38.462 | 130 | 75 | 3 | 37 | 164 | 64 | 190 | 1.30e-20 | 95.9 |
MS.gene030037.t1 | MTR_1g073790 | 37.692 | 130 | 76 | 3 | 37 | 164 | 61 | 187 | 8.38e-20 | 93.2 |
MS.gene030037.t1 | MTR_7g107160 | 34.532 | 139 | 78 | 3 | 39 | 165 | 131 | 268 | 1.29e-19 | 91.7 |
MS.gene030037.t1 | MTR_7g107160 | 38.158 | 76 | 46 | 1 | 95 | 169 | 4 | 79 | 9.26e-11 | 64.3 |
MS.gene030037.t1 | MTR_1g073800 | 35.385 | 130 | 81 | 3 | 37 | 164 | 48 | 176 | 1.11e-17 | 85.5 |
MS.gene030037.t1 | MTR_3g106700 | 30.657 | 137 | 81 | 5 | 36 | 162 | 66 | 198 | 5.47e-17 | 84.7 |
MS.gene030037.t1 | MTR_3g106700 | 30.968 | 155 | 94 | 6 | 33 | 174 | 401 | 555 | 2.71e-14 | 76.3 |
MS.gene030037.t1 | MTR_8g011730 | 33.117 | 154 | 89 | 4 | 38 | 186 | 14 | 158 | 3.23e-16 | 80.5 |
MS.gene030037.t1 | MTR_8g006190 | 34.167 | 120 | 71 | 3 | 51 | 162 | 5 | 124 | 3.75e-15 | 77.8 |
MS.gene030037.t1 | MTR_4g123750 | 31.429 | 140 | 86 | 5 | 56 | 187 | 40 | 177 | 3.25e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene030037.t1 | AT5G06600 | 55.172 | 174 | 66 | 4 | 6 | 167 | 13 | 186 | 2.18e-56 | 202 |
MS.gene030037.t1 | AT5G06600 | 55.172 | 174 | 66 | 4 | 6 | 167 | 12 | 185 | 3.29e-56 | 202 |
MS.gene030037.t1 | AT5G06600 | 55.172 | 174 | 66 | 4 | 6 | 167 | 13 | 186 | 3.29e-56 | 202 |
MS.gene030037.t1 | AT3G11910 | 55.128 | 156 | 69 | 1 | 13 | 167 | 29 | 184 | 6.25e-55 | 198 |
MS.gene030037.t1 | AT3G11910 | 55.128 | 156 | 69 | 1 | 13 | 167 | 29 | 184 | 6.25e-55 | 198 |
MS.gene030037.t1 | AT3G11910 | 55.128 | 156 | 69 | 1 | 13 | 167 | 30 | 185 | 6.50e-55 | 198 |
MS.gene030037.t1 | AT3G11910 | 55.128 | 156 | 69 | 1 | 13 | 167 | 30 | 185 | 6.50e-55 | 198 |
MS.gene030037.t1 | AT3G58250 | 43.750 | 128 | 69 | 2 | 38 | 162 | 10 | 137 | 3.15e-27 | 111 |
MS.gene030037.t1 | AT3G58270 | 37.500 | 176 | 99 | 3 | 38 | 208 | 8 | 177 | 2.18e-26 | 110 |
MS.gene030037.t1 | AT3G58270 | 37.500 | 176 | 99 | 3 | 38 | 208 | 8 | 177 | 2.18e-26 | 110 |
MS.gene030037.t1 | AT3G58270 | 37.500 | 176 | 99 | 3 | 38 | 208 | 8 | 177 | 2.18e-26 | 110 |
MS.gene030037.t1 | AT3G58410 | 37.500 | 136 | 83 | 1 | 38 | 173 | 8 | 141 | 2.32e-26 | 109 |
MS.gene030037.t1 | AT3G58370 | 40.157 | 127 | 72 | 2 | 38 | 160 | 9 | 135 | 6.87e-23 | 99.0 |
MS.gene030037.t1 | AT3G58360 | 35.915 | 142 | 84 | 2 | 36 | 173 | 6 | 144 | 7.80e-23 | 99.0 |
MS.gene030037.t1 | AT3G58410 | 34.014 | 147 | 81 | 2 | 28 | 174 | 19 | 149 | 1.85e-22 | 98.6 |
MS.gene030037.t1 | AT3G58340 | 33.784 | 148 | 94 | 2 | 38 | 181 | 8 | 155 | 4.04e-22 | 97.1 |
MS.gene030037.t1 | AT3G58200 | 38.261 | 115 | 67 | 3 | 38 | 149 | 8 | 121 | 6.86e-22 | 96.7 |
MS.gene030037.t1 | AT3G58340 | 34.043 | 141 | 92 | 1 | 38 | 177 | 8 | 148 | 8.49e-22 | 96.3 |
MS.gene030037.t1 | AT3G58210 | 36.735 | 147 | 87 | 3 | 30 | 173 | 3 | 146 | 8.95e-22 | 96.3 |
MS.gene030037.t1 | AT3G58350 | 34.307 | 137 | 86 | 2 | 38 | 170 | 8 | 144 | 2.36e-21 | 94.7 |
MS.gene030037.t1 | AT3G58350 | 34.307 | 137 | 86 | 2 | 38 | 170 | 8 | 144 | 2.36e-21 | 94.7 |
MS.gene030037.t1 | AT3G58260 | 36.429 | 140 | 84 | 3 | 39 | 173 | 9 | 148 | 2.25e-20 | 92.0 |
MS.gene030037.t1 | AT2G05420 | 35.811 | 148 | 83 | 4 | 32 | 170 | 5 | 149 | 4.35e-20 | 90.9 |
MS.gene030037.t1 | AT2G05410 | 37.762 | 143 | 82 | 4 | 31 | 170 | 4 | 142 | 1.07e-19 | 90.1 |
MS.gene030037.t1 | AT1G04300 | 39.231 | 130 | 74 | 3 | 37 | 164 | 68 | 194 | 4.68e-19 | 91.3 |
MS.gene030037.t1 | AT5G43560 | 38.298 | 141 | 81 | 4 | 41 | 178 | 73 | 210 | 5.49e-19 | 90.9 |
MS.gene030037.t1 | AT5G43560 | 38.298 | 141 | 81 | 4 | 41 | 178 | 73 | 210 | 5.49e-19 | 90.9 |
MS.gene030037.t1 | AT1G31390 | 37.398 | 123 | 73 | 2 | 33 | 151 | 3 | 125 | 1.06e-18 | 86.3 |
MS.gene030037.t1 | AT1G31400 | 34.483 | 145 | 88 | 4 | 33 | 173 | 3 | 144 | 2.24e-18 | 85.5 |
MS.gene030037.t1 | AT3G27040 | 31.884 | 138 | 92 | 2 | 38 | 173 | 9 | 146 | 9.99e-18 | 83.6 |
MS.gene030037.t1 | AT1G04300 | 36.957 | 138 | 74 | 4 | 37 | 164 | 68 | 202 | 1.48e-17 | 86.3 |
MS.gene030037.t1 | AT5G52330 | 37.795 | 127 | 74 | 3 | 41 | 165 | 23 | 146 | 2.79e-17 | 84.0 |
MS.gene030037.t1 | AT5G52330 | 37.795 | 127 | 74 | 3 | 41 | 165 | 23 | 146 | 2.79e-17 | 84.0 |
MS.gene030037.t1 | AT5G52330 | 37.795 | 127 | 74 | 3 | 41 | 165 | 23 | 146 | 2.79e-17 | 84.0 |
MS.gene030037.t1 | AT3G58290 | 33.824 | 136 | 77 | 4 | 38 | 161 | 11 | 145 | 1.57e-16 | 80.1 |
MS.gene030037.t1 | AT1G04300 | 42.342 | 111 | 59 | 3 | 56 | 164 | 68 | 175 | 2.18e-16 | 82.8 |
MS.gene030037.t1 | AT2G25320 | 29.197 | 137 | 83 | 5 | 36 | 162 | 70 | 202 | 6.93e-16 | 81.3 |
MS.gene030037.t1 | AT2G25320 | 30.556 | 144 | 87 | 6 | 33 | 164 | 399 | 541 | 7.04e-14 | 75.1 |
MS.gene030037.t1 | AT2G25320 | 29.197 | 137 | 83 | 5 | 36 | 162 | 71 | 203 | 6.93e-16 | 81.3 |
MS.gene030037.t1 | AT2G25320 | 30.556 | 144 | 87 | 6 | 33 | 164 | 400 | 542 | 6.98e-14 | 75.1 |
MS.gene030037.t1 | AT2G25320 | 29.197 | 137 | 83 | 5 | 36 | 162 | 71 | 203 | 1.56e-15 | 80.1 |
MS.gene030037.t1 | AT2G25320 | 30.556 | 144 | 87 | 6 | 33 | 164 | 400 | 542 | 2.34e-13 | 73.2 |
MS.gene030037.t1 | AT3G58440 | 37.795 | 127 | 72 | 5 | 38 | 160 | 10 | 133 | 2.71e-15 | 79.0 |
MS.gene030037.t1 | AT2G25330 | 29.412 | 136 | 82 | 5 | 37 | 162 | 46 | 177 | 6.68e-15 | 77.8 |
MS.gene030037.t1 | AT2G25330 | 29.518 | 166 | 99 | 5 | 30 | 177 | 351 | 516 | 3.62e-11 | 65.9 |
MS.gene030037.t1 | AT3G58400 | 32.800 | 125 | 80 | 3 | 59 | 179 | 24 | 148 | 1.75e-14 | 74.3 |
MS.gene030037.t1 | AT3G17380 | 32.836 | 134 | 83 | 3 | 59 | 187 | 45 | 176 | 2.01e-14 | 74.3 |
MS.gene030037.t1 | AT3G17380 | 29.323 | 133 | 91 | 1 | 33 | 162 | 170 | 302 | 1.44e-12 | 68.9 |
MS.gene030037.t1 | AT3G58220 | 32.061 | 131 | 75 | 5 | 39 | 160 | 13 | 138 | 3.17e-14 | 74.3 |
MS.gene030037.t1 | AT3G58220 | 32.061 | 131 | 75 | 5 | 39 | 160 | 13 | 138 | 4.07e-14 | 74.7 |
MS.gene030037.t1 | AT2G01790 | 30.769 | 143 | 95 | 2 | 35 | 173 | 5 | 147 | 4.25e-14 | 72.8 |
MS.gene030037.t1 | AT3G44800 | 32.450 | 151 | 94 | 5 | 38 | 180 | 5 | 155 | 4.66e-14 | 73.6 |
MS.gene030037.t1 | AT2G32870 | 30.323 | 155 | 92 | 3 | 25 | 163 | 256 | 410 | 6.34e-14 | 73.9 |
MS.gene030037.t1 | AT3G58220 | 32.061 | 131 | 75 | 5 | 39 | 160 | 13 | 138 | 7.86e-14 | 72.0 |
MS.gene030037.t1 | AT3G44790 | 33.784 | 148 | 89 | 5 | 38 | 180 | 5 | 148 | 8.55e-14 | 72.8 |
MS.gene030037.t1 | AT3G58220 | 32.061 | 131 | 75 | 5 | 39 | 160 | 13 | 138 | 9.36e-14 | 73.2 |
MS.gene030037.t1 | AT3G58220 | 32.168 | 143 | 78 | 6 | 39 | 167 | 13 | 150 | 1.27e-13 | 72.0 |
MS.gene030037.t1 | AT2G42460 | 36.567 | 134 | 80 | 4 | 39 | 170 | 10 | 140 | 2.05e-13 | 71.2 |
MS.gene030037.t1 | AT3G58430 | 31.061 | 132 | 82 | 4 | 38 | 167 | 8 | 132 | 4.70e-12 | 67.4 |
MS.gene030037.t1 | AT1G58270 | 32.800 | 125 | 76 | 3 | 39 | 160 | 254 | 373 | 7.35e-12 | 67.4 |
MS.gene030037.t1 | AT3G46190 | 30.328 | 122 | 82 | 1 | 39 | 160 | 183 | 301 | 8.18e-12 | 66.6 |
MS.gene030037.t1 | AT3G58430 | 31.061 | 132 | 82 | 4 | 38 | 167 | 8 | 132 | 1.28e-11 | 67.0 |
MS.gene030037.t1 | AT3G46190 | 30.328 | 122 | 82 | 1 | 39 | 160 | 163 | 281 | 1.71e-11 | 65.5 |
Find 80 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAACCAAATCCTCTTTAA+AGG | 0.130602 | 5.2:+77383485 | None:intergenic |
CCTTCAATGCTTCATTATTT+TGG | 0.184786 | 5.2:+77383265 | None:intergenic |
TCCACAGTGTTGACAGTTTC+AGG | 0.199373 | 5.2:+77384993 | None:intergenic |
CAACACTGACTTGTTCTAAT+TGG | 0.227007 | 5.2:+77383376 | None:intergenic |
ATCAACGAGGCGATGGAAAA+TGG | 0.274943 | 5.2:+77383053 | None:intergenic |
TTAAAGCTGGGGATTATAAT+TGG | 0.278804 | 5.2:-77384893 | MS.gene030037:intron |
CAGTTCACATTGTCCCCTTT+GGG | 0.284331 | 5.2:+77384741 | None:intergenic |
GAACTGTTTGTCCCTGTATT+TGG | 0.285951 | 5.2:-77384724 | MS.gene030037:CDS |
CATCGCCTTTAAAGAGGATT+TGG | 0.307011 | 5.2:-77383490 | MS.gene030037:CDS |
ACTGCGTTGAAGTTATCTTT+TGG | 0.321932 | 5.2:+77383441 | None:intergenic |
CCTCTCTGAGCAACTTCTTC+AGG | 0.338224 | 5.2:-77383523 | MS.gene030037:CDS |
GAGAGTTAAGTTGTGTTTGT+TGG | 0.343736 | 5.2:+77383199 | None:intergenic |
CTCCGGAATTTGACCTTCAA+TGG | 0.346689 | 5.2:+77383011 | None:intergenic |
GAATGATACTCTTATTGTTC+AGG | 0.348487 | 5.2:-77384348 | MS.gene030037:CDS |
AGCAAAGACATAAATCAAAA+TGG | 0.350329 | 5.2:+77382931 | None:intergenic |
ACAGTTCACATTGTCCCCTT+TGG | 0.355393 | 5.2:+77384740 | None:intergenic |
CTTTGAAGTGTTGTCTTTGT+TGG | 0.364472 | 5.2:+77383695 | None:intergenic |
CCAAAATAATGAAGCATTGA+AGG | 0.364943 | 5.2:-77383265 | MS.gene030037:CDS |
AGGACAAGAAGCCTCGAAAC+TGG | 0.383209 | 5.2:-77383553 | MS.gene030037:CDS |
CACTTTCTCGTGCATTGAAC+TGG | 0.386925 | 5.2:+77384435 | None:intergenic |
AAGACGGTGCTGAGCATGTA+AGG | 0.406417 | 5.2:-77384292 | MS.gene030037:CDS |
AACCATTGAAGGTCAAATTC+CGG | 0.412168 | 5.2:-77383013 | MS.gene030037:CDS |
TTCACAAGATACCCACTTGC+AGG | 0.417142 | 5.2:+77384368 | None:intergenic |
TCTAATTCAGTTTGAGCCTC+CGG | 0.423520 | 5.2:+77382994 | None:intergenic |
TATTCAGATGTATTTAAAGC+TGG | 0.424191 | 5.2:-77384906 | MS.gene030037:CDS |
TCAATGCACGAGAAAGTGAT+TGG | 0.429775 | 5.2:-77384430 | MS.gene030037:CDS |
CATCTGCAACATCCAAATAC+AGG | 0.446954 | 5.2:+77384712 | None:intergenic |
ATTCAGATGTATTTAAAGCT+GGG | 0.448008 | 5.2:-77384905 | MS.gene030037:CDS |
GTCAAATTGAAAACCATTGA+AGG | 0.458212 | 5.2:-77383024 | MS.gene030037:CDS |
CAATGCACGAGAAAGTGATT+GGG | 0.459106 | 5.2:-77384429 | MS.gene030037:CDS |
AATAATTACACTGTGAGAAA+AGG | 0.470901 | 5.2:-77384624 | MS.gene030037:intron |
AAAAGAAAGACAACGAATAC+AGG | 0.472256 | 5.2:-77385749 | MS.gene030037:intron |
GTCAGGCTGCGCGATTCAAA+TGG | 0.472294 | 5.2:-77384968 | MS.gene030037:CDS |
GCAACTTCTTCAGGAGTTGA+GGG | 0.472922 | 5.2:-77383514 | MS.gene030037:CDS |
TGTCAACACTGTGGATAGTC+AGG | 0.475646 | 5.2:-77384985 | MS.gene030037:CDS |
GAAGCTCTATCGAATCTTCA+AGG | 0.476401 | 5.2:-77382962 | MS.gene030037:CDS |
AAGAAGTTGCTCAGAGAGGT+TGG | 0.479834 | 5.2:+77383527 | None:intergenic |
GTGTACTTATTTACCCCAAA+GGG | 0.483142 | 5.2:-77384755 | MS.gene030037:CDS |
GATGCAGTTACTTTGCCATA+TGG | 0.487013 | 5.2:-77384693 | MS.gene030037:CDS |
CAGTTACTTTGCCATATGGT+TGG | 0.487154 | 5.2:-77384689 | MS.gene030037:CDS |
GTCTGTGAAAGATGTCTTTG+TGG | 0.490969 | 5.2:+77383221 | None:intergenic |
AGCAACTTCTTCAGGAGTTG+AGG | 0.503075 | 5.2:-77383515 | MS.gene030037:CDS |
AGGTGACAGGGACAAATTTG+TGG | 0.506782 | 5.2:-77383130 | MS.gene030037:CDS |
AAATCTCAGCATTCTGTACA+AGG | 0.508974 | 5.2:-77383573 | MS.gene030037:CDS |
AGAAGTTGCTCAGAGAGGTT+GGG | 0.517374 | 5.2:+77383528 | None:intergenic |
GAGGGACATCGCCTTTAAAG+AGG | 0.517716 | 5.2:-77383496 | MS.gene030037:CDS |
GCATGTCTGCTCCAACCATA+TGG | 0.518309 | 5.2:+77384678 | None:intergenic |
AGACATGCACAGTTTAGCAT+TGG | 0.526471 | 5.2:-77384663 | MS.gene030037:CDS |
GTTGGTACCTTCATCATGAG+TGG | 0.527895 | 5.2:+77383713 | None:intergenic |
CTTGATCATCAACGAGGCGA+TGG | 0.532154 | 5.2:+77383046 | None:intergenic |
GAGGTTGGGATCCAGTTTCG+AGG | 0.539249 | 5.2:+77383542 | None:intergenic |
AGAAGCTCAAGAGTCAAAAG+TGG | 0.548650 | 5.2:-77383745 | MS.gene030037:CDS |
AAGACATAAATCAAAATGGA+GGG | 0.558434 | 5.2:+77382935 | None:intergenic |
GGTTATGCAGAAGAGATTGA+AGG | 0.574444 | 5.2:-77383826 | MS.gene030037:intron |
CGTGTACTTATTTACCCCAA+AGG | 0.575914 | 5.2:-77384756 | MS.gene030037:CDS |
TTCAGATGTATTTAAAGCTG+GGG | 0.580150 | 5.2:-77384904 | MS.gene030037:CDS |
AAGGAGGTGGTGAAAATGAA+AGG | 0.588012 | 5.2:-77385787 | MS.gene030037:CDS |
ATCTTCTCAATAACATTGTG+AGG | 0.590327 | 5.2:-77383347 | MS.gene030037:CDS |
GACTTGTTCTAATTGGTGAG+AGG | 0.599483 | 5.2:+77383383 | None:intergenic |
ATAGAGACCACTCATGATGA+AGG | 0.600160 | 5.2:-77383720 | MS.gene030037:CDS |
AATGCACGAGAAAGTGATTG+GGG | 0.609643 | 5.2:-77384428 | MS.gene030037:CDS |
AAAGACATAAATCAAAATGG+AGG | 0.614222 | 5.2:+77382934 | None:intergenic |
GCAGAAGAGATTGAAGGACC+AGG | 0.617045 | 5.2:-77383820 | MS.gene030037:intron |
GATTTGTTTGATCCTGCAAG+TGG | 0.618417 | 5.2:-77384380 | MS.gene030037:CDS |
ATTCTCACAGGCTAGATGGA+AGG | 0.621171 | 5.2:-77385806 | None:intergenic |
AGACATAAATCAAAATGGAG+GGG | 0.626342 | 5.2:+77382936 | None:intergenic |
ACAGGCTAGATGGAAGGAGG+TGG | 0.630158 | 5.2:-77385800 | None:intergenic |
ATCTGCAACATCCAAATACA+GGG | 0.645455 | 5.2:+77384713 | None:intergenic |
ATTTGTTTGATCCTGCAAGT+GGG | 0.646262 | 5.2:-77384379 | MS.gene030037:CDS |
CTCACAGGCTAGATGGAAGG+AGG | 0.646988 | 5.2:-77385803 | None:intergenic |
AGACGGTGCTGAGCATGTAA+GGG | 0.649892 | 5.2:-77384291 | MS.gene030037:intron |
CGCAATGTGGATGAGAAAGA+CGG | 0.650370 | 5.2:-77384308 | MS.gene030037:CDS |
AGTTCACATTGTCCCCTTTG+GGG | 0.653119 | 5.2:+77384742 | None:intergenic |
CCTGAAGAAGTTGCTCAGAG+AGG | 0.665960 | 5.2:+77383523 | None:intergenic |
GGATCAAACAAATCACAAAG+AGG | 0.668141 | 5.2:+77384389 | None:intergenic |
TGTTAAAGTAACACGCAATG+TGG | 0.690876 | 5.2:-77384321 | MS.gene030037:CDS |
CATTGAAGGTCAAATTCCGG+AGG | 0.691134 | 5.2:-77383010 | MS.gene030037:CDS |
TGTACTTATTTACCCCAAAG+GGG | 0.693824 | 5.2:-77384754 | MS.gene030037:CDS |
ACCTGAAACTGTCAACACTG+TGG | 0.702025 | 5.2:-77384994 | MS.gene030037:CDS |
ATTTGACTTGATCATCAACG+AGG | 0.752249 | 5.2:+77383040 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTATATGATAGATATT+TGG | - | chr5.2:77384571-77384590 | MS.gene030037:intron | 10.0% |
!! | TTAAACTTAAAACTTACATT+AGG | + | chr5.2:77384526-77384545 | None:intergenic | 15.0% |
!! | ATGTTCATTGTATTCATTTA+TGG | + | chr5.2:77383111-77383130 | None:intergenic | 20.0% |
!! | GAAATTATCTAAAAAACTAG+TGG | + | chr5.2:77384672-77384691 | None:intergenic | 20.0% |
!! | TATCATATAAAAAATTAGCC+CGG | + | chr5.2:77384565-77384584 | None:intergenic | 20.0% |
!! | TGTTCAAAAAAAAAACTGTA+AGG | + | chr5.2:77384156-77384175 | None:intergenic | 20.0% |
!! | TTCATTTATTAACAACTGTA+AGG | + | chr5.2:77384190-77384209 | None:intergenic | 20.0% |
!! | TTGGTTGAAAAATTTAAACA+CGG | - | chr5.2:77385265-77385284 | MS.gene030037:intron | 20.0% |
!! | TTTCAACATAGATATATGTA+TGG | + | chr5.2:77384216-77384235 | None:intergenic | 20.0% |
!!! | AGTTTCTCTTATAGTTTTTT+AGG | + | chr5.2:77383321-77383340 | None:intergenic | 20.0% |
!!! | TTTTAGATAATTTCTCAATC+TGG | - | chr5.2:77384678-77384697 | MS.gene030037:CDS | 20.0% |
! | AATAATTACACTGTGAGAAA+AGG | - | chr5.2:77384112-77384131 | MS.gene030037:intron | 25.0% |
! | ACTAATATAACAACTACGAT+AGG | + | chr5.2:77383900-77383919 | None:intergenic | 25.0% |
! | AGATATTCTTACGTACTTTA+GGG | - | chr5.2:77384473-77384492 | MS.gene030037:intron | 25.0% |
! | ATCTAAAAAACTAGTGGTTT+GGG | + | chr5.2:77384666-77384685 | None:intergenic | 25.0% |
! | CTCTGTAATATGTAAATCAA+AGG | - | chr5.2:77383076-77383095 | MS.gene030037:CDS | 25.0% |
! | GATTTCAAATCCAATTGTAT+AGG | - | chr5.2:77383485-77383504 | MS.gene030037:CDS | 25.0% |
! | GTAACAAATTCGAACATTTA+GGG | - | chr5.2:77384759-77384778 | MS.gene030037:CDS | 25.0% |
! | GTACAATAGAAATAGTCATA+AGG | + | chr5.2:77384835-77384854 | None:intergenic | 25.0% |
! | TAACAAATTCGAACATTTAG+GGG | - | chr5.2:77384760-77384779 | MS.gene030037:CDS | 25.0% |
! | TAGATATTCTTACGTACTTT+AGG | - | chr5.2:77384472-77384491 | MS.gene030037:intron | 25.0% |
! | TATCTAAAAAACTAGTGGTT+TGG | + | chr5.2:77384667-77384686 | None:intergenic | 25.0% |
! | TATGTTGAAAAGAGAAATGA+TGG | - | chr5.2:77384226-77384245 | MS.gene030037:intron | 25.0% |
!! | AAAAGAGAAATGATGGAATT+AGG | - | chr5.2:77384233-77384252 | MS.gene030037:intron | 25.0% |
!! | ATTCAGATGTATTTAAAGCT+GGG | - | chr5.2:77383831-77383850 | MS.gene030037:intron | 25.0% |
!! | CTTTGATTTACATATTACAG+AGG | + | chr5.2:77383078-77383097 | None:intergenic | 25.0% |
!! | TATTCAGATGTATTTAAAGC+TGG | - | chr5.2:77383830-77383849 | MS.gene030037:intron | 25.0% |
!! | TCTGTGGATTTAATTTATAC+TGG | - | chr5.2:77384859-77384878 | MS.gene030037:intron | 25.0% |
!! | TTCGTTGTCTTTCTTTTATT+AGG | + | chr5.2:77382984-77383003 | None:intergenic | 25.0% |
!!! | TAAATGTTCGAATTTGTTAC+CGG | + | chr5.2:77384759-77384778 | None:intergenic | 25.0% |
AAAAGAAAGACAACGAATAC+AGG | - | chr5.2:77382987-77383006 | MS.gene030037:CDS | 30.0% | |
AACAAATTCGAACATTTAGG+GGG | - | chr5.2:77384761-77384780 | MS.gene030037:intron | 30.0% | |
AACATAGATGAATTAAGCGT+AGG | - | chr5.2:77383126-77383145 | MS.gene030037:CDS | 30.0% | |
AATATATTCTCCTAAACTGC+AGG | - | chr5.2:77383583-77383602 | MS.gene030037:CDS | 30.0% | |
ACAATCTTAGAAAGAGAGTT+GGG | - | chr5.2:77383159-77383178 | MS.gene030037:CDS | 30.0% | |
AGCACTTATAGTAGAAAAGA+TGG | - | chr5.2:77383184-77383203 | MS.gene030037:CDS | 30.0% | |
ATATATTCTCCTAAACTGCA+GGG | - | chr5.2:77383584-77383603 | MS.gene030037:CDS | 30.0% | |
ATCCTTACTATAGAATCTAC+CGG | + | chr5.2:77383251-77383270 | None:intergenic | 30.0% | |
ATCTTCTCAATAACATTGTG+AGG | - | chr5.2:77385389-77385408 | MS.gene030037:intron | 30.0% | |
CAAAAATAAAGAGTCATTGG+AGG | - | chr5.2:77384952-77384971 | MS.gene030037:CDS | 30.0% | |
CCAAAAGAAACCTATACAAT+TGG | + | chr5.2:77383498-77383517 | None:intergenic | 30.0% | |
CTGTAAGGAACAAAATGAAT+AGG | + | chr5.2:77384141-77384160 | None:intergenic | 30.0% | |
GAATGATACTCTTATTGTTC+AGG | - | chr5.2:77384388-77384407 | MS.gene030037:CDS | 30.0% | |
GCACAAAAATAAAGAGTCAT+TGG | - | chr5.2:77384949-77384968 | MS.gene030037:CDS | 30.0% | |
GGTAACAAATTCGAACATTT+AGG | - | chr5.2:77384758-77384777 | MS.gene030037:CDS | 30.0% | |
GTCAAATTGAAAACCATTGA+AGG | - | chr5.2:77385712-77385731 | MS.gene030037:intron | 30.0% | |
TAACAACTGTAAGGAACAAT+TGG | + | chr5.2:77384181-77384200 | None:intergenic | 30.0% | |
TAACTTCTAAACAAAGTCAC+CGG | - | chr5.2:77384543-77384562 | MS.gene030037:intron | 30.0% | |
TAGAAAAGATGGTGCAAATT+AGG | - | chr5.2:77383195-77383214 | MS.gene030037:CDS | 30.0% | |
TGAACTGAATATGAACAACT+GGG | - | chr5.2:77384888-77384907 | MS.gene030037:intron | 30.0% | |
TTAAAGCTGGGGATTATAAT+TGG | - | chr5.2:77383843-77383862 | MS.gene030037:intron | 30.0% | |
TTCAACCAAATCCTCTTTAA+AGG | + | chr5.2:77385254-77385273 | None:intergenic | 30.0% | |
TTTCTATTGTACTATCTCTG+TGG | - | chr5.2:77384843-77384862 | MS.gene030037:intron | 30.0% | |
TTTGAAAAAAGAGCAAGACT+CGG | - | chr5.2:77385432-77385451 | MS.gene030037:intron | 30.0% | |
! | CCAATTGTATAGGTTTCTTT+TGG | - | chr5.2:77383495-77383514 | MS.gene030037:CDS | 30.0% |
! | CCTTCAATGCTTCATTATTT+TGG | + | chr5.2:77385474-77385493 | None:intergenic | 30.0% |
! | TACAGAATGCTGAGATTTTA+AGG | + | chr5.2:77385161-77385180 | None:intergenic | 30.0% |
! | TTCAGATGTATTTAAAGCTG+GGG | - | chr5.2:77383832-77383851 | MS.gene030037:intron | 30.0% |
! | TTTGGGTAGAGTTCAAATTT+TGG | + | chr5.2:77384649-77384668 | None:intergenic | 30.0% |
!! | ATTGACAGAGTTTTATCAGA+AGG | - | chr5.2:77385124-77385143 | MS.gene030037:intron | 30.0% |
!! | CCAAAATAATGAAGCATTGA+AGG | - | chr5.2:77385471-77385490 | MS.gene030037:intron | 30.0% |
!! | TACCTGGCTTGATTTATTTT+GGG | + | chr5.2:77384499-77384518 | None:intergenic | 30.0% |
!! | TTGACAGAGTTTTATCAGAA+GGG | - | chr5.2:77385125-77385144 | MS.gene030037:intron | 30.0% |
!!! | TTTTGTGCTTTTTTTCTTCC+TGG | + | chr5.2:77384937-77384956 | None:intergenic | 30.0% |
AAATCTCAGCATTCTGTACA+AGG | - | chr5.2:77385163-77385182 | MS.gene030037:intron | 35.0% | |
AACCATTGAAGGTCAAATTC+CGG | - | chr5.2:77385723-77385742 | MS.gene030037:intron | 35.0% | |
AACTTCTAAACAAAGTCACC+GGG | - | chr5.2:77384544-77384563 | MS.gene030037:intron | 35.0% | |
ACAAATTCGAACATTTAGGG+GGG | - | chr5.2:77384762-77384781 | MS.gene030037:intron | 35.0% | |
ACATATTACAGAGGCTAAGT+AGG | + | chr5.2:77383069-77383088 | None:intergenic | 35.0% | |
AGTAAGGATAGTAGTTCAGA+TGG | - | chr5.2:77383262-77383281 | MS.gene030037:CDS | 35.0% | |
ATCTGCAACATCCAAATACA+GGG | + | chr5.2:77384026-77384045 | None:intergenic | 35.0% | |
ATTTGTTTGATCCTGCAAGT+GGG | - | chr5.2:77384357-77384376 | MS.gene030037:CDS | 35.0% | |
CAATCTTAGAAAGAGAGTTG+GGG | - | chr5.2:77383160-77383179 | MS.gene030037:CDS | 35.0% | |
CAGTGAGAGATACTTCAATT+AGG | - | chr5.2:77383546-77383565 | MS.gene030037:CDS | 35.0% | |
CTGAACTGAATATGAACAAC+TGG | - | chr5.2:77384887-77384906 | MS.gene030037:intron | 35.0% | |
GAACTGAATATGAACAACTG+GGG | - | chr5.2:77384889-77384908 | MS.gene030037:intron | 35.0% | |
GACAATCTTAGAAAGAGAGT+TGG | - | chr5.2:77383158-77383177 | MS.gene030037:CDS | 35.0% | |
GGATCAAACAAATCACAAAG+AGG | + | chr5.2:77384350-77384369 | None:intergenic | 35.0% | |
GTGTACTTATTTACCCCAAA+GGG | - | chr5.2:77383981-77384000 | MS.gene030037:intron | 35.0% | |
TGAAAAACTACAAGGTGACA+GGG | - | chr5.2:77385594-77385613 | MS.gene030037:intron | 35.0% | |
TGTACTTATTTACCCCAAAG+GGG | - | chr5.2:77383982-77384001 | MS.gene030037:intron | 35.0% | |
TGTTAAAGTAACACGCAATG+TGG | - | chr5.2:77384415-77384434 | MS.gene030037:CDS | 35.0% | |
TTGAAAAACTACAAGGTGAC+AGG | - | chr5.2:77385593-77385612 | MS.gene030037:intron | 35.0% | |
! | AAGCCTTATCCAAGTAAGTA+GGG | + | chr5.2:77383430-77383449 | None:intergenic | 35.0% |
! | ACTGCGTTGAAGTTATCTTT+TGG | + | chr5.2:77385298-77385317 | None:intergenic | 35.0% |
! | GAGAGTTAAGTTGTGTTTGT+TGG | + | chr5.2:77385540-77385559 | None:intergenic | 35.0% |
! | GAGGGAAAATGACATAGTTT+TGG | + | chr5.2:77384627-77384646 | None:intergenic | 35.0% |
! | GGACAATTGACAGATTTTCT+CGG | - | chr5.2:77383789-77383808 | MS.gene030037:CDS | 35.0% |
! | GGTAGAGTTCAAATTTTGGA+GGG | + | chr5.2:77384645-77384664 | None:intergenic | 35.0% |
! | TCAATCTGGAACACTAATTC+TGG | - | chr5.2:77384692-77384711 | MS.gene030037:CDS | 35.0% |
! | TTTCTTTTGGTATCCAAGTC+AGG | - | chr5.2:77383508-77383527 | MS.gene030037:CDS | 35.0% |
!! | ACATTCTCTGAAACAGTTCA+TGG | - | chr5.2:77383867-77383886 | MS.gene030037:intron | 35.0% |
!! | ATTTGACTTGATCATCAACG+AGG | + | chr5.2:77385699-77385718 | None:intergenic | 35.0% |
!! | CAACACTGACTTGTTCTAAT+TGG | + | chr5.2:77385363-77385382 | None:intergenic | 35.0% |
!! | CTACCTGGCTTGATTTATTT+TGG | + | chr5.2:77384500-77384519 | None:intergenic | 35.0% |
!! | CTTTGAAGTGTTGTCTTTGT+TGG | + | chr5.2:77385044-77385063 | None:intergenic | 35.0% |
!!! | ACCTTGTAGTTTTTCAAGCT+TGG | + | chr5.2:77385590-77385609 | None:intergenic | 35.0% |
AAGGAGGTGGTGAAAATGAA+AGG | - | chr5.2:77382949-77382968 | MS.gene030037:CDS | 40.0% | |
AAGGATAGTAGTTCAGATGG+AGG | - | chr5.2:77383265-77383284 | MS.gene030037:CDS | 40.0% | |
AATGCACGAGAAAGTGATTG+GGG | - | chr5.2:77384308-77384327 | MS.gene030037:CDS | 40.0% | |
AATGCTTATCCCTGCAGTTT+AGG | + | chr5.2:77383596-77383615 | None:intergenic | 40.0% | |
ACAAGTTCATGAACCTGACT+TGG | + | chr5.2:77383524-77383543 | None:intergenic | 40.0% | |
AGAAGCTCAAGAGTCAAAAG+TGG | - | chr5.2:77384991-77385010 | MS.gene030037:CDS | 40.0% | |
AGACATGCACAGTTTAGCAT+TGG | - | chr5.2:77384073-77384092 | MS.gene030037:intron | 40.0% | |
AGATGGTGCAAATTAGGCTT+AGG | - | chr5.2:77383201-77383220 | MS.gene030037:CDS | 40.0% | |
ATAGAGACCACTCATGATGA+AGG | - | chr5.2:77385016-77385035 | MS.gene030037:intron | 40.0% | |
CAAATTCGAACATTTAGGGG+GGG | - | chr5.2:77384763-77384782 | MS.gene030037:intron | 40.0% | |
CAATGCACGAGAAAGTGATT+GGG | - | chr5.2:77384307-77384326 | MS.gene030037:CDS | 40.0% | |
CAGCGAATTAGCTGAAAACT+TGG | + | chr5.2:77383674-77383693 | None:intergenic | 40.0% | |
CATCTGCAACATCCAAATAC+AGG | + | chr5.2:77384027-77384046 | None:intergenic | 40.0% | |
CGAATTAGCTGAAAACTTGG+AGG | + | chr5.2:77383671-77383690 | None:intergenic | 40.0% | |
CGTGTACTTATTTACCCCAA+AGG | - | chr5.2:77383980-77383999 | MS.gene030037:intron | 40.0% | |
CTACTTACTTGGATAAGGCT+TGG | - | chr5.2:77383429-77383448 | MS.gene030037:CDS | 40.0% | |
GAACTGTTTGTCCCTGTATT+TGG | - | chr5.2:77384012-77384031 | MS.gene030037:intron | 40.0% | |
GAAGCTCTATCGAATCTTCA+AGG | - | chr5.2:77385774-77385793 | MS.gene030037:CDS | 40.0% | |
GACCGGTAGATTCTATAGTA+AGG | - | chr5.2:77383246-77383265 | MS.gene030037:CDS | 40.0% | |
GAGGATAGTCAGATCACTAA+AGG | - | chr5.2:77383284-77383303 | MS.gene030037:CDS | 40.0% | |
GCCAAGCTTGAAAAACTACA+AGG | - | chr5.2:77385586-77385605 | MS.gene030037:intron | 40.0% | |
GGTTATGCAGAAGAGATTGA+AGG | - | chr5.2:77384910-77384929 | MS.gene030037:CDS | 40.0% | |
GTCAGATCACTAAAGGTAGA+AGG | - | chr5.2:77383291-77383310 | MS.gene030037:CDS | 40.0% | |
GTCTGTGAAAGATGTCTTTG+TGG | + | chr5.2:77385518-77385537 | None:intergenic | 40.0% | |
TCAATGCACGAGAAAGTGAT+TGG | - | chr5.2:77384306-77384325 | MS.gene030037:CDS | 40.0% | |
TCAGTATGTAGAGAGAAGAC+CGG | - | chr5.2:77383229-77383248 | MS.gene030037:CDS | 40.0% | |
TCTAATTCAGTTTGAGCCTC+CGG | + | chr5.2:77385745-77385764 | None:intergenic | 40.0% | |
TGTTACCGGAAACGTACTTT+CGG | + | chr5.2:77384745-77384764 | None:intergenic | 40.0% | |
! | ACTTACATTAGGTTGCTACC+TGG | + | chr5.2:77384515-77384534 | None:intergenic | 40.0% |
! | CAAGCCTTATCCAAGTAAGT+AGG | + | chr5.2:77383431-77383450 | None:intergenic | 40.0% |
! | CAGTTACTTTGCCATATGGT+TGG | - | chr5.2:77384047-77384066 | MS.gene030037:intron | 40.0% |
! | CATCGCCTTTAAAGAGGATT+TGG | - | chr5.2:77385246-77385265 | MS.gene030037:intron | 40.0% |
! | CTATCTAGCTCGTTAATCTC+TGG | + | chr5.2:77383356-77383375 | None:intergenic | 40.0% |
! | GACTTGTTCTAATTGGTGAG+AGG | + | chr5.2:77385356-77385375 | None:intergenic | 40.0% |
! | GATGCAGTTACTTTGCCATA+TGG | - | chr5.2:77384043-77384062 | MS.gene030037:intron | 40.0% |
! | GATTTGTTTGATCCTGCAAG+TGG | - | chr5.2:77384356-77384375 | MS.gene030037:CDS | 40.0% |
! | GGGTAGAGTTCAAATTTTGG+AGG | + | chr5.2:77384646-77384665 | None:intergenic | 40.0% |
! | GTGTCACTGTTCTTTGATAC+TGG | - | chr5.2:77383034-77383053 | MS.gene030037:CDS | 40.0% |
!! | TTCTCTGAAACAGTTCATGG+TGG | - | chr5.2:77383870-77383889 | MS.gene030037:intron | 40.0% |
!!! | GTTTTTTTTCCACTCTGAGC+AGG | - | chr5.2:77383957-77383976 | MS.gene030037:intron | 40.0% |
AAGAAGTTGCTCAGAGAGGT+TGG | + | chr5.2:77385212-77385231 | None:intergenic | 45.0% | |
ACAGTTCACATTGTCCCCTT+TGG | + | chr5.2:77383999-77384018 | None:intergenic | 45.0% | |
ACCTGAAACTGTCAACACTG+TGG | - | chr5.2:77383742-77383761 | MS.gene030037:CDS | 45.0% | |
AGAAGTTGCTCAGAGAGGTT+GGG | + | chr5.2:77385211-77385230 | None:intergenic | 45.0% | |
AGCAACTTCTTCAGGAGTTG+AGG | - | chr5.2:77385221-77385240 | MS.gene030037:intron | 45.0% | |
AGGTGACAGGGACAAATTTG+TGG | - | chr5.2:77385606-77385625 | MS.gene030037:intron | 45.0% | |
AGTAAGTAGGGTCGACTACA+TGG | + | chr5.2:77383418-77383437 | None:intergenic | 45.0% | |
AGTTCACATTGTCCCCTTTG+GGG | + | chr5.2:77383997-77384016 | None:intergenic | 45.0% | |
ATCAACGAGGCGATGGAAAA+TGG | + | chr5.2:77385686-77385705 | None:intergenic | 45.0% | |
CACTTTCTCGTGCATTGAAC+TGG | + | chr5.2:77384304-77384323 | None:intergenic | 45.0% | |
CAGTTCACATTGTCCCCTTT+GGG | + | chr5.2:77383998-77384017 | None:intergenic | 45.0% | |
CATTGAAGGTCAAATTCCGG+AGG | - | chr5.2:77385726-77385745 | MS.gene030037:intron | 45.0% | |
CGACCCTACTTACTTGGATA+AGG | - | chr5.2:77383424-77383443 | MS.gene030037:CDS | 45.0% | |
CGCAATGTGGATGAGAAAGA+CGG | - | chr5.2:77384428-77384447 | MS.gene030037:CDS | 45.0% | |
CTCCGGAATTTGACCTTCAA+TGG | + | chr5.2:77385728-77385747 | None:intergenic | 45.0% | |
GCAACTTCTTCAGGAGTTGA+GGG | - | chr5.2:77385222-77385241 | MS.gene030037:intron | 45.0% | |
GGCCCAAAATAAATCAAGCC+AGG | - | chr5.2:77384494-77384513 | MS.gene030037:intron | 45.0% | |
GTTGGTACCTTCATCATGAG+TGG | + | chr5.2:77385026-77385045 | None:intergenic | 45.0% | |
TGGTGCAAATTAGGCTTAGG+TGG | - | chr5.2:77383204-77383223 | MS.gene030037:CDS | 45.0% | |
TGTAGTCGACCCTACTTACT+TGG | - | chr5.2:77383418-77383437 | MS.gene030037:CDS | 45.0% | |
TGTCAACACTGTGGATAGTC+AGG | - | chr5.2:77383751-77383770 | MS.gene030037:CDS | 45.0% | |
TTCACAAGATACCCACTTGC+AGG | + | chr5.2:77384371-77384390 | None:intergenic | 45.0% | |
! | CACTACCGAAAGTACGTTTC+CGG | - | chr5.2:77384737-77384756 | MS.gene030037:CDS | 45.0% |
!! | TCCACAGTGTTGACAGTTTC+AGG | + | chr5.2:77383746-77383765 | None:intergenic | 45.0% |
AGGACAAGAAGCCTCGAAAC+TGG | - | chr5.2:77385183-77385202 | MS.gene030037:intron | 50.0% | |
CCTCTCTGAGCAACTTCTTC+AGG | - | chr5.2:77385213-77385232 | MS.gene030037:intron | 50.0% | |
CCTGAAGAAGTTGCTCAGAG+AGG | + | chr5.2:77385216-77385235 | None:intergenic | 50.0% | |
CTTGATCATCAACGAGGCGA+TGG | + | chr5.2:77385693-77385712 | None:intergenic | 50.0% | |
GCAGAAGAGATTGAAGGACC+AGG | - | chr5.2:77384916-77384935 | MS.gene030037:CDS | 50.0% | |
GCATGTCTGCTCCAACCATA+TGG | + | chr5.2:77384061-77384080 | None:intergenic | 50.0% | |
! | AAGACGGTGCTGAGCATGTA+AGG | - | chr5.2:77384444-77384463 | MS.gene030037:CDS | 50.0% |
! | AGACGGTGCTGAGCATGTAA+GGG | - | chr5.2:77384445-77384464 | MS.gene030037:CDS | 50.0% |
! | GAGGGACATCGCCTTTAAAG+AGG | - | chr5.2:77385240-77385259 | MS.gene030037:intron | 50.0% |
AAGTACACGCCTGCTCAGAG+TGG | + | chr5.2:77383969-77383988 | None:intergenic | 55.0% | |
GAGGTTGGGATCCAGTTTCG+AGG | + | chr5.2:77385197-77385216 | None:intergenic | 55.0% | |
GTCAGGCTGCGCGATTCAAA+TGG | - | chr5.2:77383768-77383787 | MS.gene030037:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 77382945 | 77385813 | 77382945 | ID=MS.gene030037 |
chr5.2 | mRNA | 77382945 | 77385813 | 77382945 | ID=MS.gene030037.t1;Parent=MS.gene030037 |
chr5.2 | exon | 77385750 | 77385813 | 77385750 | ID=MS.gene030037.t1.exon1;Parent=MS.gene030037.t1 |
chr5.2 | CDS | 77385750 | 77385813 | 77385750 | ID=cds.MS.gene030037.t1;Parent=MS.gene030037.t1 |
chr5.2 | exon | 77384894 | 77385026 | 77384894 | ID=MS.gene030037.t1.exon2;Parent=MS.gene030037.t1 |
chr5.2 | CDS | 77384894 | 77385026 | 77384894 | ID=cds.MS.gene030037.t1;Parent=MS.gene030037.t1 |
chr5.2 | exon | 77384625 | 77384779 | 77384625 | ID=MS.gene030037.t1.exon3;Parent=MS.gene030037.t1 |
chr5.2 | CDS | 77384625 | 77384779 | 77384625 | ID=cds.MS.gene030037.t1;Parent=MS.gene030037.t1 |
chr5.2 | exon | 77384292 | 77384467 | 77384292 | ID=MS.gene030037.t1.exon4;Parent=MS.gene030037.t1 |
chr5.2 | CDS | 77384292 | 77384467 | 77384292 | ID=cds.MS.gene030037.t1;Parent=MS.gene030037.t1 |
chr5.2 | exon | 77382945 | 77383838 | 77382945 | ID=MS.gene030037.t1.exon5;Parent=MS.gene030037.t1 |
chr5.2 | CDS | 77382945 | 77383838 | 77382945 | ID=cds.MS.gene030037.t1;Parent=MS.gene030037.t1 |
Gene Sequence |
Protein sequence |