Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73820.t1 | XP_003607568.2 | 95.5 | 382 | 17 | 0 | 1 | 382 | 1 | 382 | 4.70E-204 | 720.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73820.t1 | G7JCJ6 | 95.5 | 382 | 17 | 0 | 1 | 382 | 1 | 382 | 3.4e-204 | 720.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene73820 | 0.852857 | 3.51E-61 | -1.69E-46 |
| MS.gene049230 | MS.gene73820 | 0.834992 | 2.17E-56 | -1.69E-46 |
| MS.gene049254 | MS.gene73820 | 0.836671 | 8.16E-57 | -1.69E-46 |
| MS.gene049343 | MS.gene73820 | 0.800828 | 1.20E-48 | -1.69E-46 |
| MS.gene049378 | MS.gene73820 | 0.813041 | 3.13E-51 | -1.69E-46 |
| MS.gene049419 | MS.gene73820 | -0.83409 | 3.66E-56 | -1.69E-46 |
| MS.gene049424 | MS.gene73820 | 0.824024 | 1.01E-53 | -1.69E-46 |
| MS.gene049435 | MS.gene73820 | 0.819999 | 8.65E-53 | -1.69E-46 |
| MS.gene049452 | MS.gene73820 | 0.839403 | 1.62E-57 | -1.69E-46 |
| MS.gene049669 | MS.gene73820 | 0.841054 | 6.00E-58 | -1.69E-46 |
| MS.gene049983 | MS.gene73820 | 0.831833 | 1.33E-55 | -1.69E-46 |
| MS.gene050105 | MS.gene73820 | 0.863911 | 1.78E-64 | -1.69E-46 |
| MS.gene050355 | MS.gene73820 | 0.830516 | 2.81E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene73820 | 0.842219 | 2.96E-58 | -1.69E-46 |
| MS.gene050559 | MS.gene73820 | 0.806361 | 8.54E-50 | -1.69E-46 |
| MS.gene050561 | MS.gene73820 | 0.805206 | 1.49E-49 | -1.69E-46 |
| MS.gene050605 | MS.gene73820 | 0.84495 | 5.50E-59 | -1.69E-46 |
| MS.gene050623 | MS.gene73820 | -0.808331 | 3.26E-50 | -1.69E-46 |
| MS.gene050680 | MS.gene73820 | 0.844036 | 9.69E-59 | -1.69E-46 |
| MS.gene050750 | MS.gene73820 | 0.839819 | 1.26E-57 | -1.69E-46 |
| MS.gene050759 | MS.gene73820 | 0.815599 | 8.51E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene73820 | -0.840647 | 7.67E-58 | -1.69E-46 |
| MS.gene050953 | MS.gene73820 | 0.856662 | 2.76E-62 | -1.69E-46 |
| MS.gene050962 | MS.gene73820 | 0.811212 | 7.84E-51 | -1.69E-46 |
| MS.gene051122 | MS.gene73820 | 0.849174 | 3.83E-60 | -1.69E-46 |
| MS.gene051181 | MS.gene73820 | 0.837005 | 6.71E-57 | -1.69E-46 |
| MS.gene051368 | MS.gene73820 | 0.8811 | 3.18E-70 | -1.69E-46 |
| MS.gene051370 | MS.gene73820 | 0.820579 | 6.37E-53 | -1.69E-46 |
| MS.gene051452 | MS.gene73820 | 0.812453 | 4.21E-51 | -1.69E-46 |
| MS.gene051800 | MS.gene73820 | 0.805281 | 1.44E-49 | -1.69E-46 |
| MS.gene051924 | MS.gene73820 | -0.82131 | 4.32E-53 | -1.69E-46 |
| MS.gene051926 | MS.gene73820 | -0.840017 | 1.12E-57 | -1.69E-46 |
| MS.gene051983 | MS.gene73820 | 0.803984 | 2.68E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene73820 | 0.834988 | 2.18E-56 | -1.69E-46 |
| MS.gene052108 | MS.gene73820 | 0.829669 | 4.52E-55 | -1.69E-46 |
| MS.gene052176 | MS.gene73820 | 0.821228 | 4.51E-53 | -1.69E-46 |
| MS.gene052190 | MS.gene73820 | 0.808976 | 2.38E-50 | -1.69E-46 |
| MS.gene052208 | MS.gene73820 | 0.818331 | 2.07E-52 | -1.69E-46 |
| MS.gene052333 | MS.gene73820 | 0.87444 | 6.74E-68 | -1.69E-46 |
| MS.gene052426 | MS.gene73820 | 0.841147 | 5.67E-58 | -1.69E-46 |
| MS.gene052464 | MS.gene73820 | 0.811686 | 6.18E-51 | -1.69E-46 |
| MS.gene052500 | MS.gene73820 | 0.813443 | 2.55E-51 | -1.69E-46 |
| MS.gene052502 | MS.gene73820 | 0.810814 | 9.56E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene73820 | 0.839441 | 1.58E-57 | -1.69E-46 |
| MS.gene052586 | MS.gene73820 | 0.823361 | 1.44E-53 | -1.69E-46 |
| MS.gene052674 | MS.gene73820 | 0.841832 | 3.74E-58 | -1.69E-46 |
| MS.gene052675 | MS.gene73820 | 0.837659 | 4.56E-57 | -1.69E-46 |
| MS.gene052677 | MS.gene73820 | 0.843031 | 1.80E-58 | -1.69E-46 |
| MS.gene052685 | MS.gene73820 | 0.800131 | 1.66E-48 | -1.69E-46 |
| MS.gene052773 | MS.gene73820 | 0.819327 | 1.23E-52 | -1.69E-46 |
| MS.gene052826 | MS.gene73820 | 0.813797 | 2.13E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene73820 | 0.815401 | 9.42E-52 | -1.69E-46 |
| MS.gene052867 | MS.gene73820 | 0.814539 | 1.46E-51 | -1.69E-46 |
| MS.gene052954 | MS.gene73820 | 0.876213 | 1.67E-68 | -1.69E-46 |
| MS.gene053006 | MS.gene73820 | 0.857189 | 1.93E-62 | -1.69E-46 |
| MS.gene053008 | MS.gene73820 | 0.831365 | 1.74E-55 | -1.69E-46 |
| MS.gene05308 | MS.gene73820 | 0.8027 | 4.95E-49 | -1.69E-46 |
| MS.gene053166 | MS.gene73820 | 0.85541 | 6.43E-62 | -1.69E-46 |
| MS.gene053188 | MS.gene73820 | 0.812975 | 3.23E-51 | -1.69E-46 |
| MS.gene053201 | MS.gene73820 | 0.800693 | 1.28E-48 | -1.69E-46 |
| MS.gene053216 | MS.gene73820 | 0.814971 | 1.17E-51 | -1.69E-46 |
| MS.gene053226 | MS.gene73820 | 0.809795 | 1.59E-50 | -1.69E-46 |
| MS.gene053360 | MS.gene73820 | 0.819253 | 1.28E-52 | -1.69E-46 |
| MS.gene053931 | MS.gene73820 | 0.830366 | 3.06E-55 | -1.69E-46 |
| MS.gene053963 | MS.gene73820 | 0.816937 | 4.27E-52 | -1.69E-46 |
| MS.gene05414 | MS.gene73820 | 0.837551 | 4.86E-57 | -1.69E-46 |
| MS.gene05415 | MS.gene73820 | 0.864214 | 1.43E-64 | -1.69E-46 |
| MS.gene054160 | MS.gene73820 | 0.801235 | 9.91E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene73820 | 0.831481 | 1.63E-55 | -1.69E-46 |
| MS.gene054291 | MS.gene73820 | -0.827872 | 1.23E-54 | -1.69E-46 |
| MS.gene054405 | MS.gene73820 | 0.850165 | 2.03E-60 | -1.69E-46 |
| MS.gene054479 | MS.gene73820 | 0.865261 | 6.71E-65 | -1.69E-46 |
| MS.gene054537 | MS.gene73820 | 0.801094 | 1.06E-48 | -1.69E-46 |
| MS.gene054559 | MS.gene73820 | 0.830924 | 2.23E-55 | -1.69E-46 |
| MS.gene054651 | MS.gene73820 | 0.81851 | 1.89E-52 | -1.69E-46 |
| MS.gene054657 | MS.gene73820 | 0.850777 | 1.36E-60 | -1.69E-46 |
| MS.gene054658 | MS.gene73820 | 0.809792 | 1.59E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene73820 | 0.842619 | 2.32E-58 | -1.69E-46 |
| MS.gene05510 | MS.gene73820 | 0.87908 | 1.67E-69 | -1.69E-46 |
| MS.gene055166 | MS.gene73820 | 0.808691 | 2.74E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene73820 | 0.82764 | 1.40E-54 | -1.69E-46 |
| MS.gene055222 | MS.gene73820 | 0.840709 | 7.38E-58 | -1.69E-46 |
| MS.gene055225 | MS.gene73820 | 0.806724 | 7.16E-50 | -1.69E-46 |
| MS.gene055227 | MS.gene73820 | 0.82629 | 2.94E-54 | -1.69E-46 |
| MS.gene055228 | MS.gene73820 | 0.815344 | 9.70E-52 | -1.69E-46 |
| MS.gene055230 | MS.gene73820 | 0.820439 | 6.85E-53 | -1.69E-46 |
| MS.gene055367 | MS.gene73820 | 0.806367 | 8.51E-50 | -1.69E-46 |
| MS.gene055623 | MS.gene73820 | 0.832049 | 1.18E-55 | -1.69E-46 |
| MS.gene055701 | MS.gene73820 | 0.88609 | 4.63E-72 | -1.69E-46 |
| MS.gene055818 | MS.gene73820 | 0.855228 | 7.26E-62 | -1.69E-46 |
| MS.gene055841 | MS.gene73820 | 0.822889 | 1.86E-53 | -1.69E-46 |
| MS.gene055926 | MS.gene73820 | 0.807378 | 5.20E-50 | -1.69E-46 |
| MS.gene056162 | MS.gene73820 | 0.835701 | 1.44E-56 | -1.69E-46 |
| MS.gene056174 | MS.gene73820 | 0.842453 | 2.56E-58 | -1.69E-46 |
| MS.gene056252 | MS.gene73820 | 0.801786 | 7.64E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene73820 | 0.821031 | 5.01E-53 | -1.69E-46 |
| MS.gene056506 | MS.gene73820 | 0.870421 | 1.48E-66 | -1.69E-46 |
| MS.gene05659 | MS.gene73820 | 0.806259 | 8.97E-50 | -1.69E-46 |
| MS.gene056776 | MS.gene73820 | 0.817265 | 3.61E-52 | -1.69E-46 |
| MS.gene056779 | MS.gene73820 | 0.828805 | 7.33E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene73820 | 0.809035 | 2.31E-50 | -1.69E-46 |
| MS.gene056873 | MS.gene73820 | 0.836051 | 1.17E-56 | -1.69E-46 |
| MS.gene05690 | MS.gene73820 | 0.822525 | 2.26E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene73820 | 0.834538 | 2.83E-56 | -1.69E-46 |
| MS.gene057060 | MS.gene73820 | 0.820658 | 6.11E-53 | -1.69E-46 |
| MS.gene057156 | MS.gene73820 | -0.832032 | 1.19E-55 | -1.69E-46 |
| MS.gene057194 | MS.gene73820 | 0.837737 | 4.36E-57 | -1.69E-46 |
| MS.gene057208 | MS.gene73820 | 0.862607 | 4.50E-64 | -1.69E-46 |
| MS.gene057392 | MS.gene73820 | 0.802801 | 4.72E-49 | -1.69E-46 |
| MS.gene057598 | MS.gene73820 | 0.823 | 1.75E-53 | -1.69E-46 |
| MS.gene05761 | MS.gene73820 | 0.825925 | 3.59E-54 | -1.69E-46 |
| MS.gene057693 | MS.gene73820 | 0.834634 | 2.68E-56 | -1.69E-46 |
| MS.gene057855 | MS.gene73820 | 0.827794 | 1.28E-54 | -1.69E-46 |
| MS.gene057869 | MS.gene73820 | 0.806269 | 8.93E-50 | -1.69E-46 |
| MS.gene05795 | MS.gene73820 | 0.808511 | 2.99E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene73820 | 0.811872 | 5.63E-51 | -1.69E-46 |
| MS.gene058009 | MS.gene73820 | 0.837571 | 4.80E-57 | -1.69E-46 |
| MS.gene058010 | MS.gene73820 | 0.810794 | 9.65E-51 | -1.69E-46 |
| MS.gene058037 | MS.gene73820 | 0.816601 | 5.08E-52 | -1.69E-46 |
| MS.gene058146 | MS.gene73820 | 0.84587 | 3.10E-59 | -1.69E-46 |
| MS.gene058223 | MS.gene73820 | -0.832053 | 1.18E-55 | -1.69E-46 |
| MS.gene058399 | MS.gene73820 | 0.826913 | 2.09E-54 | -1.69E-46 |
| MS.gene058548 | MS.gene73820 | 0.847975 | 8.23E-60 | -1.69E-46 |
| MS.gene058549 | MS.gene73820 | 0.814353 | 1.61E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene73820 | 0.840041 | 1.10E-57 | -1.69E-46 |
| MS.gene058783 | MS.gene73820 | 0.819102 | 1.39E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene73820 | 0.852598 | 4.16E-61 | -1.69E-46 |
| MS.gene05897 | MS.gene73820 | 0.801742 | 7.80E-49 | -1.69E-46 |
| MS.gene059161 | MS.gene73820 | 0.827328 | 1.66E-54 | -1.69E-46 |
| MS.gene059283 | MS.gene73820 | 0.822088 | 2.86E-53 | -1.69E-46 |
| MS.gene059306 | MS.gene73820 | 0.815396 | 9.45E-52 | -1.69E-46 |
| MS.gene059317 | MS.gene73820 | 0.802237 | 6.17E-49 | -1.69E-46 |
| MS.gene059382 | MS.gene73820 | 0.814168 | 1.77E-51 | -1.69E-46 |
| MS.gene059569 | MS.gene73820 | 0.803337 | 3.66E-49 | -1.69E-46 |
| MS.gene059710 | MS.gene73820 | 0.813471 | 2.52E-51 | -1.69E-46 |
| MS.gene05979 | MS.gene73820 | 0.840057 | 1.09E-57 | -1.69E-46 |
| MS.gene059830 | MS.gene73820 | 0.811763 | 5.95E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene73820 | 0.805829 | 1.11E-49 | -1.69E-46 |
| MS.gene059952 | MS.gene73820 | 0.810612 | 1.06E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene73820 | 0.868866 | 4.75E-66 | -1.69E-46 |
| MS.gene060310 | MS.gene73820 | 0.820096 | 8.22E-53 | -1.69E-46 |
| MS.gene060322 | MS.gene73820 | 0.839078 | 1.97E-57 | -1.69E-46 |
| MS.gene060521 | MS.gene73820 | 0.802981 | 4.33E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene73820 | 0.831595 | 1.53E-55 | -1.69E-46 |
| MS.gene060683 | MS.gene73820 | 0.82184 | 3.26E-53 | -1.69E-46 |
| MS.gene060685 | MS.gene73820 | 0.82372 | 1.19E-53 | -1.69E-46 |
| MS.gene060802 | MS.gene73820 | 0.824849 | 6.46E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene73820 | 0.836784 | 7.64E-57 | -1.69E-46 |
| MS.gene060840 | MS.gene73820 | 0.806164 | 9.40E-50 | -1.69E-46 |
| MS.gene060850 | MS.gene73820 | 0.824257 | 8.90E-54 | -1.69E-46 |
| MS.gene060851 | MS.gene73820 | 0.830292 | 3.19E-55 | -1.69E-46 |
| MS.gene060852 | MS.gene73820 | 0.833308 | 5.75E-56 | -1.69E-46 |
| MS.gene060879 | MS.gene73820 | 0.813907 | 2.02E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene73820 | 0.830411 | 2.98E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene73820 | 0.812443 | 4.23E-51 | -1.69E-46 |
| MS.gene060998 | MS.gene73820 | 0.82374 | 1.18E-53 | -1.69E-46 |
| MS.gene061040 | MS.gene73820 | -0.812358 | 4.41E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73820.t1 | MTR_4g079720 | 95.550 | 382 | 17 | 0 | 1 | 382 | 1 | 382 | 0.0 | 746 |
| MS.gene73820.t1 | MTR_4g079720 | 94.241 | 382 | 16 | 1 | 1 | 382 | 1 | 376 | 0.0 | 730 |
| MS.gene73820.t1 | MTR_2g091180 | 43.947 | 380 | 176 | 6 | 11 | 382 | 4 | 354 | 5.97e-87 | 267 |
| MS.gene73820.t1 | MTR_2g091180 | 43.152 | 387 | 176 | 7 | 11 | 382 | 3 | 360 | 2.16e-84 | 261 |
| MS.gene73820.t1 | MTR_2g091180 | 43.152 | 387 | 176 | 7 | 11 | 382 | 4 | 361 | 2.40e-84 | 261 |
| MS.gene73820.t1 | MTR_2g091180 | 41.573 | 356 | 164 | 7 | 42 | 382 | 1 | 327 | 3.32e-66 | 213 |
| MS.gene73820.t1 | MTR_2g091180 | 40.364 | 275 | 136 | 4 | 11 | 278 | 4 | 257 | 1.34e-53 | 179 |
| MS.gene73820.t1 | MTR_8g463800 | 52.459 | 61 | 29 | 0 | 2 | 62 | 1 | 61 | 5.20e-16 | 79.3 |
| MS.gene73820.t1 | MTR_8g463800 | 52.459 | 61 | 29 | 0 | 2 | 62 | 1 | 61 | 6.64e-16 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73820.t1 | AT2G31130 | 59.459 | 74 | 24 | 1 | 4 | 77 | 1 | 68 | 2.76e-20 | 92.0 |
| MS.gene73820.t1 | AT2G31130 | 59.459 | 74 | 24 | 1 | 4 | 77 | 1 | 68 | 2.76e-20 | 92.0 |
| MS.gene73820.t1 | AT2G31130 | 59.459 | 74 | 24 | 1 | 4 | 77 | 1 | 68 | 2.76e-20 | 92.0 |
| MS.gene73820.t1 | AT2G31130 | 59.459 | 74 | 24 | 1 | 4 | 77 | 1 | 68 | 2.76e-20 | 92.0 |
| MS.gene73820.t1 | AT2G31130 | 59.459 | 74 | 24 | 1 | 4 | 77 | 1 | 68 | 2.76e-20 | 92.0 |
| MS.gene73820.t1 | AT2G31130 | 59.459 | 74 | 24 | 1 | 4 | 77 | 1 | 68 | 2.76e-20 | 92.0 |
Find 71 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATCTTTCCATGAAATTT+TGG | 0.133339 | 4.4:-31454141 | None:intergenic |
| TCCTTCAATTTCATGTGTTT+TGG | 0.177090 | 4.4:+31454051 | MS.gene73820:CDS |
| CTTCAGATTACCAACTTCTT+TGG | 0.191632 | 4.4:-31458398 | None:intergenic |
| TGGATGTGGACGGCATAAAT+TGG | 0.210693 | 4.4:+31452905 | MS.gene73820:CDS |
| GCATCAGTAACCTGATCTTT+TGG | 0.256965 | 4.4:-31454097 | None:intergenic |
| TTGCTTTCTAGCAGATTTCT+TGG | 0.260392 | 4.4:-31458556 | None:intergenic |
| TGCTAGAAAGCAAGAGTATA+AGG | 0.317925 | 4.4:+31458566 | MS.gene73820:CDS |
| TGTGATGGCGTGCGTGTATC+TGG | 0.319600 | 4.4:-31454415 | None:intergenic |
| TTCTCTGGTAGGTTTATCTA+TGG | 0.325519 | 4.4:+31454715 | MS.gene73820:intron |
| AAGACAACATGTTGGGAAAA+AGG | 0.331871 | 4.4:+31454303 | MS.gene73820:CDS |
| AAATCAAGTAAATGAGAAAA+TGG | 0.332230 | 4.4:+31454354 | MS.gene73820:CDS |
| AGTGATTTCATTGAATATCT+TGG | 0.346778 | 4.4:-31454383 | None:intergenic |
| TTCAGATTACCAACTTCTTT+GGG | 0.351485 | 4.4:-31458397 | None:intergenic |
| TGAATCCTCGGTTGTTTGCT+TGG | 0.362328 | 4.4:-31454176 | None:intergenic |
| GAAGCCAATCCAAAATTTCA+TGG | 0.382371 | 4.4:+31454132 | MS.gene73820:CDS |
| AGAATCAGATGCAGACTGTT+GGG | 0.391691 | 4.4:+31453984 | MS.gene73820:CDS |
| TTAACTTGTACCAGAACATA+AGG | 0.392992 | 4.4:-31454571 | None:intergenic |
| CTCGTTCAAGACAACATGTT+GGG | 0.395208 | 4.4:+31454296 | MS.gene73820:CDS |
| ATCTACAGAAGCTCCCATTC+AGG | 0.403281 | 4.4:-31458702 | None:intergenic |
| AAAGATCAGGTTACTGATGC+TGG | 0.409528 | 4.4:+31454100 | MS.gene73820:CDS |
| GAATTTAGATCAAACATTAC+AGG | 0.419398 | 4.4:+31458641 | MS.gene73820:CDS |
| TGAGCAGTTCCCTTATGTTC+TGG | 0.421839 | 4.4:+31454561 | MS.gene73820:CDS |
| TTAATTTCATTACGATGGTC+AGG | 0.423438 | 4.4:-31454526 | None:intergenic |
| CTCTGAATTCCCAAAAGATC+AGG | 0.431774 | 4.4:+31454087 | MS.gene73820:CDS |
| AAGGATATTAAATCAAATCT+TGG | 0.438091 | 4.4:+31454322 | MS.gene73820:CDS |
| ATGATCAATCTTTGAATCCT+CGG | 0.445144 | 4.4:-31454188 | None:intergenic |
| TCCAAAACACATGAAATTGA+AGG | 0.457238 | 4.4:-31454052 | None:intergenic |
| TAGTGTTTCAAAGCCAGCTT+TGG | 0.463367 | 4.4:+31454477 | MS.gene73820:CDS |
| GATATTCAATGAAATCACTT+TGG | 0.472630 | 4.4:+31454387 | MS.gene73820:CDS |
| TTTCATGGAAAGATCTGAAA+AGG | 0.475433 | 4.4:+31454147 | MS.gene73820:CDS |
| AGTATAAGGAGCTTGCAGTA+TGG | 0.488570 | 4.4:+31458580 | MS.gene73820:CDS |
| GAATTAGTTCCCAAAGAAGT+TGG | 0.489534 | 4.4:+31458388 | MS.gene73820:CDS |
| ATATCATGTCTTCTGCCTCC+AGG | 0.497633 | 4.4:-31452963 | None:intergenic |
| GAAATTTGAAAATATGTGCC+TGG | 0.506581 | 4.4:+31452945 | MS.gene73820:CDS |
| CTTGCCACTTCATCCAAAGC+TGG | 0.509797 | 4.4:-31454490 | None:intergenic |
| TATTATGATCACCATGGATG+TGG | 0.516106 | 4.4:+31452891 | None:intergenic |
| GCTTGAGGAAACTTGTGTTA+TGG | 0.522590 | 4.4:+31458348 | MS.gene73820:CDS |
| GAGAATCAGATGCAGACTGT+TGG | 0.523090 | 4.4:+31453983 | MS.gene73820:CDS |
| GGCTTTGAAACACTAGCTAC+AGG | 0.524775 | 4.4:-31454469 | None:intergenic |
| AAGTTATATTCTGATATCGT+TGG | 0.526909 | 4.4:+31454019 | MS.gene73820:CDS |
| CTTCAGATGATCTTCTTGCA+CGG | 0.536473 | 4.4:-31458326 | None:intergenic |
| TAACTTGTACCAGAACATAA+GGG | 0.537497 | 4.4:-31454570 | None:intergenic |
| TAGTGTGTCTGAACCTGAAT+GGG | 0.539352 | 4.4:+31458689 | MS.gene73820:CDS |
| AAAGCCAGCTTTGGATGAAG+TGG | 0.539961 | 4.4:+31454486 | MS.gene73820:CDS |
| ATTTATGCCGTCCACATCCA+TGG | 0.554553 | 4.4:-31452902 | None:intergenic |
| GAAACTTGTGTTATGGTGAC+TGG | 0.554745 | 4.4:+31458355 | MS.gene73820:CDS |
| GGATGTGGACGGCATAAATT+GGG | 0.555198 | 4.4:+31452906 | MS.gene73820:CDS |
| ATAGTGTGTCTGAACCTGAA+TGG | 0.563017 | 4.4:+31458688 | MS.gene73820:CDS |
| CAAAGAAGTTGGTAATCTGA+AGG | 0.564590 | 4.4:+31458399 | MS.gene73820:CDS |
| GTGGACGGCATAAATTGGGT+TGG | 0.566544 | 4.4:+31452910 | MS.gene73820:CDS |
| TGGTAATCTGAAGGCTAACA+AGG | 0.567175 | 4.4:+31458408 | MS.gene73820:CDS |
| AGAAGATCATCTGAAGCTTG+AGG | 0.576051 | 4.4:+31458333 | MS.gene73820:CDS |
| AAGATCAGGTTACTGATGCT+GGG | 0.576388 | 4.4:+31454101 | MS.gene73820:CDS |
| AAGGAGCTTGCAGTATGGCA+TGG | 0.587503 | 4.4:+31458585 | MS.gene73820:CDS |
| ATGGTGGTTCTATCTCATCC+AGG | 0.590037 | 4.4:+31454773 | MS.gene73820:CDS |
| GAAATCTCACAACCTTGTGA+TGG | 0.590279 | 4.4:-31454430 | None:intergenic |
| TTTAAGAAAACAAGGCGGCA+AGG | 0.591309 | 4.4:+31458522 | MS.gene73820:intron |
| TCTCGTTCAAGACAACATGT+TGG | 0.601662 | 4.4:+31454295 | MS.gene73820:CDS |
| ATTGGTACGAGTTCTTATGA+TGG | 0.602949 | 4.4:+31454613 | MS.gene73820:CDS |
| GAATCAGATGCAGACTGTTG+GGG | 0.611114 | 4.4:+31453985 | MS.gene73820:CDS |
| AATGATGTTGTACATAAGAC+CGG | 0.614771 | 4.4:+31454220 | MS.gene73820:CDS |
| AGATGACATAATCAAAGCAC+CGG | 0.626102 | 4.4:-31454239 | None:intergenic |
| TTTAGATCAAACATTACAGG+AGG | 0.628569 | 4.4:+31458644 | MS.gene73820:CDS |
| ATGATCACCATGGATGTGGA+CGG | 0.637739 | 4.4:+31452895 | MS.gene73820:CDS |
| GAAGGATATTATGATCACCA+TGG | 0.654134 | 4.4:+31452885 | None:intergenic |
| TGATGATTGTTCTAATAGCA+TGG | 0.676086 | 4.4:+31454754 | MS.gene73820:CDS |
| GATACACGCACGCCATCACA+AGG | 0.680730 | 4.4:+31454418 | MS.gene73820:CDS |
| TAATACCAAGCAAACAACCG+AGG | 0.708381 | 4.4:+31454171 | MS.gene73820:CDS |
| ATTTGAAAATATGTGCCTGG+AGG | 0.710944 | 4.4:+31452948 | MS.gene73820:CDS |
| GGCAGAAGACATGATATACG+AGG | 0.734207 | 4.4:+31452969 | MS.gene73820:CDS |
| TGATTGTTCTAATAGCATGG+TGG | 0.760060 | 4.4:+31454757 | MS.gene73820:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATTCATAAAAAATAAATT+AGG | - | chr4.4:31453669-31453688 | None:intergenic | 10.0% |
| !! | TTAAAAAAATTATCTCTATT+TGG | + | chr4.4:31458455-31458474 | MS.gene73820:intron | 10.0% |
| !!! | AAATAGAGATAATTTTTTTA+AGG | - | chr4.4:31458456-31458475 | None:intergenic | 10.0% |
| !!! | AATAGAGATAATTTTTTTAA+GGG | - | chr4.4:31458455-31458474 | None:intergenic | 10.0% |
| !!! | TCATTAAAAAATTATTTTAG+AGG | + | chr4.4:31456213-31456232 | MS.gene73820:intron | 10.0% |
| !!! | TGTTTTGAAATTTATTTTAT+AGG | - | chr4.4:31456442-31456461 | None:intergenic | 10.0% |
| !! | AAAAAATATCTAATTTCAGA+CGG | - | chr4.4:31456804-31456823 | None:intergenic | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | + | chr4.4:31455707-31455726 | MS.gene73820:intron | 15.0% |
| !! | AAAATAGTCAAAATGTTTAA+GGG | + | chr4.4:31453345-31453364 | MS.gene73820:intron | 15.0% |
| !! | AAACTAAAGTAAAAAGATAA+GGG | + | chr4.4:31455708-31455727 | MS.gene73820:intron | 15.0% |
| !! | CATAAAAATAAATAGTTAAG+AGG | + | chr4.4:31456293-31456312 | MS.gene73820:intron | 15.0% |
| !! | GCAATAAAATTCTTTATTAA+TGG | - | chr4.4:31457230-31457249 | None:intergenic | 15.0% |
| !! | TAAAATAGTCAAAATGTTTA+AGG | + | chr4.4:31453344-31453363 | MS.gene73820:intron | 15.0% |
| !! | TCAAATATAAATAAAACTCA+AGG | - | chr4.4:31453771-31453790 | None:intergenic | 15.0% |
| !!! | AAAAAAAAAGTTATTTTCAG+TGG | - | chr4.4:31456130-31456149 | None:intergenic | 15.0% |
| !!! | TTGAGTTATTTATGATTTTA+TGG | + | chr4.4:31457950-31457969 | MS.gene73820:intron | 15.0% |
| !!! | TTTATTTTATAGGAAAATGT+TGG | - | chr4.4:31456432-31456451 | None:intergenic | 15.0% |
| !! | AAAAGATGGAAGAAAAAAAA+GGG | - | chr4.4:31457282-31457301 | None:intergenic | 20.0% |
| !! | AAATCAAGTAAATGAGAAAA+TGG | + | chr4.4:31454354-31454373 | MS.gene73820:CDS | 20.0% |
| !! | AAGGATATTAAATCAAATCT+TGG | + | chr4.4:31454322-31454341 | MS.gene73820:CDS | 20.0% |
| !! | AATGCTTACAACAATAATTA+AGG | - | chr4.4:31453219-31453238 | None:intergenic | 20.0% |
| !! | ATGATTTAATATGCACATAT+AGG | + | chr4.4:31457429-31457448 | MS.gene73820:intron | 20.0% |
| !! | CATAAAAAATAAATTAGGCA+TGG | - | chr4.4:31453664-31453683 | None:intergenic | 20.0% |
| !! | CATTAAAATCACATAACTAT+AGG | - | chr4.4:31455758-31455777 | None:intergenic | 20.0% |
| !! | CTTATATATGTTTGTTCTTT+GGG | + | chr4.4:31453937-31453956 | MS.gene73820:intron | 20.0% |
| !! | GAAACACTAAAATAATGTAA+AGG | + | chr4.4:31456182-31456201 | MS.gene73820:intron | 20.0% |
| !! | GAAGAATATAACTTAAAACA+TGG | - | chr4.4:31456536-31456555 | None:intergenic | 20.0% |
| !! | GAATTATATGAAATAATACC+TGG | - | chr4.4:31454794-31454813 | None:intergenic | 20.0% |
| !! | TAAAACTAAATGATTCTGAA+TGG | + | chr4.4:31456492-31456511 | MS.gene73820:intron | 20.0% |
| !! | TAAAAGATGGAAGAAAAAAA+AGG | - | chr4.4:31457283-31457302 | None:intergenic | 20.0% |
| !! | TATATAAGAAATATAGTAGC+TGG | - | chr4.4:31453925-31453944 | None:intergenic | 20.0% |
| !! | TCACAAAATAACATTCAAAT+TGG | - | chr4.4:31457367-31457386 | None:intergenic | 20.0% |
| !! | TCATTCATAAAAAACAAACT+AGG | - | chr4.4:31453638-31453657 | None:intergenic | 20.0% |
| !! | TCTTATATATGTTTGTTCTT+TGG | + | chr4.4:31453936-31453955 | MS.gene73820:intron | 20.0% |
| !!! | AAAAAGGTATATAATTTGCA+TGG | - | chr4.4:31457023-31457042 | None:intergenic | 20.0% |
| !!! | AAAAGGTATATAATTTGCAT+GGG | - | chr4.4:31457022-31457041 | None:intergenic | 20.0% |
| !!! | AATTGCAAAACACAATTTTA+GGG | - | chr4.4:31453139-31453158 | None:intergenic | 20.0% |
| !!! | ACTTTAAAATTGTAGCTTAA+TGG | - | chr4.4:31455835-31455854 | None:intergenic | 20.0% |
| !!! | AGATAATTTTTTTAAGGGAA+GGG | - | chr4.4:31458450-31458469 | None:intergenic | 20.0% |
| !!! | ATGCAAATTATATACCTTTT+TGG | + | chr4.4:31457022-31457041 | MS.gene73820:intron | 20.0% |
| !!! | CATTTTTAATTTCATTACGA+TGG | - | chr4.4:31454534-31454553 | None:intergenic | 20.0% |
| !!! | CTAACTTAAATTACATTTTC+CGG | + | chr4.4:31458498-31458517 | MS.gene73820:intron | 20.0% |
| !!! | GAAAATGTAATTTAAGTTAG+AGG | - | chr4.4:31458498-31458517 | None:intergenic | 20.0% |
| !!! | TGTATTTTTTCTCTTTGATT+TGG | + | chr4.4:31454675-31454694 | MS.gene73820:intron | 20.0% |
| !!! | TTTCTAACACCATTATTTTT+TGG | + | chr4.4:31457333-31457352 | MS.gene73820:intron | 20.0% |
| !!! | TTTCTCTTATAGTTTTTCTA+AGG | + | chr4.4:31455058-31455077 | MS.gene73820:intron | 20.0% |
| !!! | TTTTTTTTCGACTATGTTAT+AGG | + | chr4.4:31456818-31456837 | MS.gene73820:intron | 20.0% |
| ! | AAAAATTCTTTCAGCTTGAA+CGG | + | chr4.4:31455310-31455329 | MS.gene73820:intron | 25.0% |
| ! | AAACATGAGATAAAGTCATA+AGG | - | chr4.4:31454648-31454667 | None:intergenic | 25.0% |
| ! | AAAGATGGAAGAAAAAAAAG+GGG | - | chr4.4:31457281-31457300 | None:intergenic | 25.0% |
| ! | AAGTTATATTCTGATATCGT+TGG | + | chr4.4:31454019-31454038 | MS.gene73820:CDS | 25.0% |
| ! | AATAATTAAGGCAGAATACT+AGG | - | chr4.4:31453207-31453226 | None:intergenic | 25.0% |
| ! | AATACCATGCCTAATTTATA+TGG | + | chr4.4:31453688-31453707 | MS.gene73820:intron | 25.0% |
| ! | ACTGAATGGTTTAATACTAT+CGG | - | chr4.4:31458180-31458199 | None:intergenic | 25.0% |
| ! | AGAAAGAAACAGAGAAATAA+AGG | - | chr4.4:31457823-31457842 | None:intergenic | 25.0% |
| ! | AGTGATTTCATTGAATATCT+TGG | - | chr4.4:31454386-31454405 | None:intergenic | 25.0% |
| ! | ATCATTACTGTTATAGAACA+AGG | + | chr4.4:31458295-31458314 | MS.gene73820:intron | 25.0% |
| ! | ATGATTTAATAGCCACATAT+AGG | + | chr4.4:31457386-31457405 | MS.gene73820:intron | 25.0% |
| ! | CAACTGTTCAAAATAAATCA+AGG | - | chr4.4:31457933-31457952 | None:intergenic | 25.0% |
| ! | CTAAGAAAAAATTACAGCAT+AGG | + | chr4.4:31453476-31453495 | MS.gene73820:intron | 25.0% |
| ! | CTACACAGTTTAAATATCTT+GGG | - | chr4.4:31455444-31455463 | None:intergenic | 25.0% |
| ! | CTCATATTGTATATACACAA+TGG | + | chr4.4:31453024-31453043 | MS.gene73820:intron | 25.0% |
| ! | CTTACTACTATTCACAAAAA+GGG | + | chr4.4:31456625-31456644 | MS.gene73820:intron | 25.0% |
| ! | GAAAGAAACAGAGAAATAAA+GGG | - | chr4.4:31457822-31457841 | None:intergenic | 25.0% |
| ! | GAATTTAGATCAAACATTAC+AGG | + | chr4.4:31458641-31458660 | MS.gene73820:CDS | 25.0% |
| ! | GATATTCAATGAAATCACTT+TGG | + | chr4.4:31454387-31454406 | MS.gene73820:CDS | 25.0% |
| ! | TTACTATGATAAATGTTGGT+AGG | + | chr4.4:31457457-31457476 | MS.gene73820:intron | 25.0% |
| !! | GAATTGCAAAACACAATTTT+AGG | - | chr4.4:31453140-31453159 | None:intergenic | 25.0% |
| !! | TGGATTCTTTAGTTTCAAAT+CGG | + | chr4.4:31453044-31453063 | MS.gene73820:intron | 25.0% |
| !! | TGTTGTTATTCAGATTTCTA+TGG | - | chr4.4:31456733-31456752 | None:intergenic | 25.0% |
| !!! | AGTTACTGAGTTTTGATATT+TGG | + | chr4.4:31454820-31454839 | MS.gene73820:intron | 25.0% |
| !!! | GAGATAATTTTTTTAAGGGA+AGG | - | chr4.4:31458451-31458470 | None:intergenic | 25.0% |
| !!! | TATACTTTTTCCCTATTAGT+AGG | + | chr4.4:31458016-31458035 | MS.gene73820:intron | 25.0% |
| !!! | TTTTTGGAACTTCTACATTA+GGG | + | chr4.4:31457038-31457057 | MS.gene73820:intron | 25.0% |
| AATCGTAAGATCCTACTAAT+AGG | - | chr4.4:31458030-31458049 | None:intergenic | 30.0% | |
| AATGATGTTGTACATAAGAC+CGG | + | chr4.4:31454220-31454239 | MS.gene73820:CDS | 30.0% | |
| AGAAAATTGTACGTAAAGCA+TGG | - | chr4.4:31456597-31456616 | None:intergenic | 30.0% | |
| AGAAATCTGAATAACAACAG+TGG | + | chr4.4:31456734-31456753 | MS.gene73820:intron | 30.0% | |
| AGTAGAAGCAAGAGATTATA+TGG | - | chr4.4:31455539-31455558 | None:intergenic | 30.0% | |
| ATAAAACTCAAGGAAGTCAA+AGG | - | chr4.4:31453761-31453780 | None:intergenic | 30.0% | |
| ATATCTAATTTCAGACGGAA+AGG | - | chr4.4:31456799-31456818 | None:intergenic | 30.0% | |
| ATCGTAAGATCCTACTAATA+GGG | - | chr4.4:31458029-31458048 | None:intergenic | 30.0% | |
| ATGATCAATCTTTGAATCCT+CGG | - | chr4.4:31454191-31454210 | None:intergenic | 30.0% | |
| ATTAACGTCCCATATAGATT+AGG | - | chr4.4:31453556-31453575 | None:intergenic | 30.0% | |
| CATAAAAAACAAACTAGGCA+TGG | - | chr4.4:31453633-31453652 | None:intergenic | 30.0% | |
| CTAATGTAGAAGTTCCAAAA+AGG | - | chr4.4:31457039-31457058 | None:intergenic | 30.0% | |
| GAAACTGATAAAGTTCTATC+AGG | - | chr4.4:31453739-31453758 | None:intergenic | 30.0% | |
| GAAATTTGAAAATATGTGCC+TGG | + | chr4.4:31452945-31452964 | MS.gene73820:CDS | 30.0% | |
| GACTCGATACCAAAAAATAA+TGG | - | chr4.4:31457345-31457364 | None:intergenic | 30.0% | |
| GCAGTTACTATGATAAATGT+TGG | + | chr4.4:31457453-31457472 | MS.gene73820:intron | 30.0% | |
| GCTACACAGTTTAAATATCT+TGG | - | chr4.4:31455445-31455464 | None:intergenic | 30.0% | |
| GCTTACTACTATTCACAAAA+AGG | + | chr4.4:31456624-31456643 | MS.gene73820:intron | 30.0% | |
| GGAAAATGTTGGTATATTAG+TGG | - | chr4.4:31456421-31456440 | None:intergenic | 30.0% | |
| GGAAACAGTGAAAAAGTAAA+CGG | + | chr4.4:31458606-31458625 | MS.gene73820:CDS | 30.0% | |
| TATAATCTCTTGCTTCTACT+CGG | + | chr4.4:31455539-31455558 | MS.gene73820:intron | 30.0% | |
| TATTTAAACTGTGTAGCTTG+TGG | + | chr4.4:31455448-31455467 | MS.gene73820:intron | 30.0% | |
| TCCAAAACACATGAAATTGA+AGG | - | chr4.4:31454055-31454074 | None:intergenic | 30.0% | |
| TGAAGTAATCACAGTGAAAT+TGG | + | chr4.4:31457556-31457575 | MS.gene73820:intron | 30.0% | |
| TGAGCTCATGCAAAAATATT+AGG | - | chr4.4:31453840-31453859 | None:intergenic | 30.0% | |
| TGATGATTGTTCTAATAGCA+TGG | + | chr4.4:31454754-31454773 | MS.gene73820:CDS | 30.0% | |
| TTAACTCACTATAGGCATTA+TGG | + | chr4.4:31454871-31454890 | MS.gene73820:intron | 30.0% | |
| TTAATTTCATTACGATGGTC+AGG | - | chr4.4:31454529-31454548 | None:intergenic | 30.0% | |
| TTCAGATTACCAACTTCTTT+GGG | - | chr4.4:31458400-31458419 | None:intergenic | 30.0% | |
| TTGTATCACATAAAACACCT+GGG | + | chr4.4:31455338-31455357 | MS.gene73820:intron | 30.0% | |
| TTTAGATCAAACATTACAGG+AGG | + | chr4.4:31458644-31458663 | MS.gene73820:CDS | 30.0% | |
| TTTCATGGAAAGATCTGAAA+AGG | + | chr4.4:31454147-31454166 | MS.gene73820:CDS | 30.0% | |
| TTTGTATCACATAAAACACC+TGG | + | chr4.4:31455337-31455356 | MS.gene73820:intron | 30.0% | |
| ! | AGAATTTTATTGCCAACACA+TGG | + | chr4.4:31457237-31457256 | MS.gene73820:intron | 30.0% |
| ! | ATGGAGAAAACTTTGTTGTA+AGG | - | chr4.4:31456902-31456921 | None:intergenic | 30.0% |
| ! | ATTGTATTGTTTTCTCTGGT+AGG | + | chr4.4:31454704-31454723 | MS.gene73820:intron | 30.0% |
| ! | ATTTCTCTGTTTCTTTCTTG+TGG | + | chr4.4:31457825-31457844 | MS.gene73820:intron | 30.0% |
| ! | ATTTTTGCATGAGCTCATAA+CGG | + | chr4.4:31453843-31453862 | MS.gene73820:intron | 30.0% |
| ! | CAGATCTTTCCATGAAATTT+TGG | - | chr4.4:31454144-31454163 | None:intergenic | 30.0% |
| ! | CTTCCATCTTTTATGTTTGA+GGG | + | chr4.4:31457290-31457309 | MS.gene73820:intron | 30.0% |
| ! | CTTTCCATGAAATTTTGGAT+TGG | - | chr4.4:31454139-31454158 | None:intergenic | 30.0% |
| ! | GATCATTGTATTGTTTTCTC+TGG | + | chr4.4:31454700-31454719 | MS.gene73820:intron | 30.0% |
| ! | TAACTTGTACCAGAACATAA+GGG | - | chr4.4:31454573-31454592 | None:intergenic | 30.0% |
| ! | TAAGAGGCAAAACAATTTTC+CGG | + | chr4.4:31456309-31456328 | MS.gene73820:intron | 30.0% |
| ! | TCCTTCAATTTCATGTGTTT+TGG | + | chr4.4:31454051-31454070 | MS.gene73820:CDS | 30.0% |
| ! | TCTAGCTTAGAGTTGAAATT+TGG | - | chr4.4:31455487-31455506 | None:intergenic | 30.0% |
| ! | TCTTCCATCTTTTATGTTTG+AGG | + | chr4.4:31457289-31457308 | MS.gene73820:intron | 30.0% |
| ! | TGGAGAAAACTTTGTTGTAA+GGG | - | chr4.4:31456901-31456920 | None:intergenic | 30.0% |
| !! | AAAGGGACATTACTTTTGTT+TGG | + | chr4.4:31456642-31456661 | MS.gene73820:intron | 30.0% |
| !! | TTAACTTGTACCAGAACATA+AGG | - | chr4.4:31454574-31454593 | None:intergenic | 30.0% |
| !!! | CTTTTTGGAACTTCTACATT+AGG | + | chr4.4:31457037-31457056 | MS.gene73820:intron | 30.0% |
| !!! | GAAGCATTTTAACTCACTAT+AGG | + | chr4.4:31454863-31454882 | MS.gene73820:intron | 30.0% |
| !!! | TTTAGTTTTGAACGCACTTA+CGG | - | chr4.4:31455696-31455715 | None:intergenic | 30.0% |
| !!! | TTTCCGGTTTTAAGAAAACA+AGG | + | chr4.4:31458514-31458533 | MS.gene73820:intron | 30.0% |
| AAAACACTCAATTCCCTTCT+GGG | + | chr4.4:31457154-31457173 | MS.gene73820:intron | 35.0% | |
| AAAACCTCTTTCTTCTCTCA+CGG | + | chr4.4:31457716-31457735 | MS.gene73820:intron | 35.0% | |
| AAATTGGTATGATTGCGAGT+TGG | + | chr4.4:31457572-31457591 | MS.gene73820:intron | 35.0% | |
| AACACCATGATACATGGAAA+TGG | - | chr4.4:31456244-31456263 | None:intergenic | 35.0% | |
| AACAGAGAAATAAAGGGAAG+AGG | - | chr4.4:31457816-31457835 | None:intergenic | 35.0% | |
| AACAGCCATCAAATTCAAGT+GGG | - | chr4.4:31455385-31455404 | None:intergenic | 35.0% | |
| AACTCTGATGTGATGACTAT+AGG | + | chr4.4:31457530-31457549 | MS.gene73820:intron | 35.0% | |
| AAGAAACCCAACCCAAATTT+GGG | - | chr4.4:31457616-31457635 | None:intergenic | 35.0% | |
| AAGAACAACACGAAACTGAA+TGG | - | chr4.4:31458194-31458213 | None:intergenic | 35.0% | |
| AAGACAACATGTTGGGAAAA+AGG | + | chr4.4:31454303-31454322 | MS.gene73820:CDS | 35.0% | |
| AAGATTCATGAGTTGCATAG+AGG | - | chr4.4:31455021-31455040 | None:intergenic | 35.0% | |
| ACACCATGATACATGGAAAT+GGG | - | chr4.4:31456243-31456262 | None:intergenic | 35.0% | |
| ACAGAGAAATAAAGGGAAGA+GGG | - | chr4.4:31457815-31457834 | None:intergenic | 35.0% | |
| AGATGACATAATCAAAGCAC+CGG | - | chr4.4:31454242-31454261 | None:intergenic | 35.0% | |
| ATAACCAAATTCTACCCAGA+AGG | - | chr4.4:31457171-31457190 | None:intergenic | 35.0% | |
| ATAACTATAGGACTGCAACA+AGG | - | chr4.4:31455746-31455765 | None:intergenic | 35.0% | |
| ATAATCTCTTGCTTCTACTC+GGG | + | chr4.4:31455540-31455559 | MS.gene73820:intron | 35.0% | |
| ATGACATGTATCACAAGCAA+TGG | - | chr4.4:31453101-31453120 | None:intergenic | 35.0% | |
| ATTCCCATTTCCATGTATCA+TGG | + | chr4.4:31456237-31456256 | MS.gene73820:intron | 35.0% | |
| ATTGGTACGAGTTCTTATGA+TGG | + | chr4.4:31454613-31454632 | MS.gene73820:CDS | 35.0% | |
| ATTTCCATGTATCATGGTGT+TGG | + | chr4.4:31456243-31456262 | MS.gene73820:intron | 35.0% | |
| ATTTGAAAATATGTGCCTGG+AGG | + | chr4.4:31452948-31452967 | MS.gene73820:CDS | 35.0% | |
| CGAGAATAAAATAAGCTCAG+CGG | - | chr4.4:31455223-31455242 | None:intergenic | 35.0% | |
| CTGGCAAGATTGAAAAACAA+TGG | - | chr4.4:31453906-31453925 | None:intergenic | 35.0% | |
| CTTCAGATTACCAACTTCTT+TGG | - | chr4.4:31458401-31458420 | None:intergenic | 35.0% | |
| GAAGCCAATCCAAAATTTCA+TGG | + | chr4.4:31454132-31454151 | MS.gene73820:CDS | 35.0% | |
| GAATTAGTTCCCAAAGAAGT+TGG | + | chr4.4:31458388-31458407 | MS.gene73820:CDS | 35.0% | |
| GACAAAGTTACTGATAACAG+AGG | - | chr4.4:31457853-31457872 | None:intergenic | 35.0% | |
| GATTTCAACCAACATGTGAT+TGG | - | chr4.4:31456991-31457010 | None:intergenic | 35.0% | |
| GCAACTTTAGCAAAAGTTGA+CGG | - | chr4.4:31455513-31455532 | None:intergenic | 35.0% | |
| GGTTGAAAGATTGTAAGTTG+AGG | - | chr4.4:31458064-31458083 | None:intergenic | 35.0% | |
| TAAAACACTCAATTCCCTTC+TGG | + | chr4.4:31457153-31457172 | MS.gene73820:intron | 35.0% | |
| TAACAGCCATCAAATTCAAG+TGG | - | chr4.4:31455386-31455405 | None:intergenic | 35.0% | |
| TAACCAAATTCTACCCAGAA+GGG | - | chr4.4:31457170-31457189 | None:intergenic | 35.0% | |
| TAACTATAGGACTGCAACAA+GGG | - | chr4.4:31455745-31455764 | None:intergenic | 35.0% | |
| TAAGAAACCCAACCCAAATT+TGG | - | chr4.4:31457617-31457636 | None:intergenic | 35.0% | |
| TATGTTTGTTCTTTGGGTAC+AGG | + | chr4.4:31453943-31453962 | MS.gene73820:intron | 35.0% | |
| TCAGCTGAAGAAAAACAGAT+TGG | + | chr4.4:31454595-31454614 | MS.gene73820:CDS | 35.0% | |
| TCTGTAGCATCTGATGAAAA+TGG | + | chr4.4:31456556-31456575 | MS.gene73820:intron | 35.0% | |
| TGATTGTTCTAATAGCATGG+TGG | + | chr4.4:31454757-31454776 | MS.gene73820:CDS | 35.0% | |
| TGTATCACATAAAACACCTG+GGG | + | chr4.4:31455339-31455358 | MS.gene73820:intron | 35.0% | |
| TTCTCTGGTAGGTTTATCTA+TGG | + | chr4.4:31454715-31454734 | MS.gene73820:intron | 35.0% | |
| ! | ATCACATGTTGGTTGAAATC+AGG | + | chr4.4:31456991-31457010 | MS.gene73820:intron | 35.0% |
| ! | ATCTTTTATGTTTGAGGGTG+GGG | + | chr4.4:31457295-31457314 | MS.gene73820:intron | 35.0% |
| ! | CAACAGGTGCCATATAAATT+AGG | - | chr4.4:31453700-31453719 | None:intergenic | 35.0% |
| ! | CATCAGTAACCTGATCTTTT+GGG | - | chr4.4:31454099-31454118 | None:intergenic | 35.0% |
| ! | CATCTTTTATGTTTGAGGGT+GGG | + | chr4.4:31457294-31457313 | MS.gene73820:intron | 35.0% |
| ! | GGAGAAAACTTTGTTGTAAG+GGG | - | chr4.4:31456900-31456919 | None:intergenic | 35.0% |
| ! | TGCTAGAAAGCAAGAGTATA+AGG | + | chr4.4:31458566-31458585 | MS.gene73820:CDS | 35.0% |
| ! | TTGCTTTCTAGCAGATTTCT+TGG | - | chr4.4:31458559-31458578 | None:intergenic | 35.0% |
| ! | TTTTAGTGAACTGAGACAAC+AGG | - | chr4.4:31453716-31453735 | None:intergenic | 35.0% |
| ! | TTTTATTGCCAACACATGGT+CGG | + | chr4.4:31457241-31457260 | MS.gene73820:intron | 35.0% |
| !! | ACTTTTTCCCAAATTTGGGT+TGG | + | chr4.4:31457606-31457625 | MS.gene73820:intron | 35.0% |
| !! | CAAAGAAGTTGGTAATCTGA+AGG | + | chr4.4:31458399-31458418 | MS.gene73820:CDS | 35.0% |
| !! | CTGGACTTTTTCCCAAATTT+GGG | + | chr4.4:31457602-31457621 | MS.gene73820:intron | 35.0% |
| !! | CTTTTTCCCAAATTTGGGTT+GGG | + | chr4.4:31457607-31457626 | MS.gene73820:intron | 35.0% |
| !! | TCTGGACTTTTTCCCAAATT+TGG | + | chr4.4:31457601-31457620 | MS.gene73820:intron | 35.0% |
| !! | TTCATGTGTTTTGGATGAGA+AGG | + | chr4.4:31454060-31454079 | MS.gene73820:CDS | 35.0% |
| !!! | AGCTTATTTTATTCTCGGGT+TGG | + | chr4.4:31455226-31455245 | MS.gene73820:intron | 35.0% |
| !!! | CGCTGAGCTTATTTTATTCT+CGG | + | chr4.4:31455221-31455240 | MS.gene73820:intron | 35.0% |
| !!! | GCTGAGCTTATTTTATTCTC+GGG | + | chr4.4:31455222-31455241 | MS.gene73820:intron | 35.0% |
| !!! | TTCTCTGTCGTTTTGTACTA+TGG | + | chr4.4:31455417-31455436 | MS.gene73820:intron | 35.0% |
| !!! | TTTTTTTAAGGGAAGGGAGT+AGG | - | chr4.4:31458444-31458463 | None:intergenic | 35.0% |
| AAACTCAGCTTAGGTGGTTT+GGG | - | chr4.4:31455153-31455172 | None:intergenic | 40.0% | |
| AAAGATCAGGTTACTGATGC+TGG | + | chr4.4:31454100-31454119 | MS.gene73820:CDS | 40.0% | |
| AACTTCTACATTAGGGTGCA+GGG | + | chr4.4:31457045-31457064 | MS.gene73820:intron | 40.0% | |
| AAGATCAGGTTACTGATGCT+GGG | + | chr4.4:31454101-31454120 | MS.gene73820:CDS | 40.0% | |
| AAGATGTTGTGTTGGATGTG+CGG | - | chr4.4:31455195-31455214 | None:intergenic | 40.0% | |
| ACACCCATGCCTAATCTATA+TGG | + | chr4.4:31453544-31453563 | MS.gene73820:intron | 40.0% | |
| ACAGCCATCAAATTCAAGTG+GGG | - | chr4.4:31455384-31455403 | None:intergenic | 40.0% | |
| ACATCAGAGTTTGTGTTTCG+TGG | - | chr4.4:31457521-31457540 | None:intergenic | 40.0% | |
| AGAATCAGATGCAGACTGTT+GGG | + | chr4.4:31453984-31454003 | MS.gene73820:CDS | 40.0% | |
| AGTATAAGGAGCTTGCAGTA+TGG | + | chr4.4:31458580-31458599 | MS.gene73820:CDS | 40.0% | |
| ATAGTGTGTCTGAACCTGAA+TGG | + | chr4.4:31458688-31458707 | MS.gene73820:CDS | 40.0% | |
| ATCACCCCACTTGAATTTGA+TGG | + | chr4.4:31455377-31455396 | MS.gene73820:intron | 40.0% | |
| ATCTGATGAAAATGGTGCAC+TGG | + | chr4.4:31456564-31456583 | MS.gene73820:intron | 40.0% | |
| ATTCCCTTCTGGGTAGAATT+TGG | + | chr4.4:31457164-31457183 | MS.gene73820:intron | 40.0% | |
| CACCCATGCCTAATCTATAT+GGG | + | chr4.4:31453545-31453564 | MS.gene73820:intron | 40.0% | |
| CATGTATCACAAGCAATGGT+AGG | - | chr4.4:31453097-31453116 | None:intergenic | 40.0% | |
| CATGTCTAATACCTCGCTAA+AGG | - | chr4.4:31453305-31453324 | None:intergenic | 40.0% | |
| CATTAGGAGAGTAGCTCATA+TGG | - | chr4.4:31455115-31455134 | None:intergenic | 40.0% | |
| CCACCCTCAAACATAAAAGA+TGG | - | chr4.4:31457296-31457315 | None:intergenic | 40.0% | |
| CTAGGTACACATAAACCAAG+AGG | - | chr4.4:31453189-31453208 | None:intergenic | 40.0% | |
| CTCGTTCAAGACAACATGTT+GGG | + | chr4.4:31454296-31454315 | MS.gene73820:CDS | 40.0% | |
| CTCTGAATTCCCAAAAGATC+AGG | + | chr4.4:31454087-31454106 | MS.gene73820:CDS | 40.0% | |
| CTTATCCAACTAAGTGGTGA+CGG | + | chr4.4:31454951-31454970 | MS.gene73820:intron | 40.0% | |
| CTTCAGATGATCTTCTTGCA+CGG | - | chr4.4:31458329-31458348 | None:intergenic | 40.0% | |
| GAAACTTGTGTTATGGTGAC+TGG | + | chr4.4:31458355-31458374 | MS.gene73820:CDS | 40.0% | |
| GAAATCTCACAACCTTGTGA+TGG | - | chr4.4:31454433-31454452 | None:intergenic | 40.0% | |
| GCATGTAGAGAGAAGACATT+AGG | - | chr4.4:31455131-31455150 | None:intergenic | 40.0% | |
| GCTTGAGGAAACTTGTGTTA+TGG | + | chr4.4:31458348-31458367 | MS.gene73820:CDS | 40.0% | |
| GTCCCATATAGATTAGGCAT+GGG | - | chr4.4:31453550-31453569 | None:intergenic | 40.0% | |
| GTCTACGTATGATCAAGATG+TGG | - | chr4.4:31458085-31458104 | None:intergenic | 40.0% | |
| TAATACCAAGCAAACAACCG+AGG | + | chr4.4:31454171-31454190 | MS.gene73820:CDS | 40.0% | |
| TAGTGTGTCTGAACCTGAAT+GGG | + | chr4.4:31458689-31458708 | MS.gene73820:CDS | 40.0% | |
| TAGTGTTTCAAAGCCAGCTT+TGG | + | chr4.4:31454477-31454496 | MS.gene73820:CDS | 40.0% | |
| TCTCGTTCAAGACAACATGT+TGG | + | chr4.4:31454295-31454314 | MS.gene73820:CDS | 40.0% | |
| TGAAAAACAATGGCAGTGCA+GGG | - | chr4.4:31453896-31453915 | None:intergenic | 40.0% | |
| TGAATAACAACAGTGGCTCT+AGG | + | chr4.4:31456741-31456760 | MS.gene73820:intron | 40.0% | |
| TGGAAGATAAAAGACACGTG+AGG | - | chr4.4:31457210-31457229 | None:intergenic | 40.0% | |
| TGGTAATCTGAAGGCTAACA+AGG | + | chr4.4:31458408-31458427 | MS.gene73820:CDS | 40.0% | |
| TGTTCTTTGGGTACAGGATA+CGG | + | chr4.4:31453949-31453968 | MS.gene73820:intron | 40.0% | |
| TTCAAGTGGGGTGATTGAAA+TGG | - | chr4.4:31455372-31455391 | None:intergenic | 40.0% | |
| TTGAAAAACAATGGCAGTGC+AGG | - | chr4.4:31453897-31453916 | None:intergenic | 40.0% | |
| TTTAAGAAAACAAGGCGGCA+AGG | + | chr4.4:31458522-31458541 | MS.gene73820:intron | 40.0% | |
| ! | AAAAGTATGCATCTCGGTGA+TGG | + | chr4.4:31455656-31455675 | MS.gene73820:intron | 40.0% |
| ! | AGAAGATCATCTGAAGCTTG+AGG | + | chr4.4:31458333-31458352 | MS.gene73820:CDS | 40.0% |
| ! | CCATCTTTTATGTTTGAGGG+TGG | + | chr4.4:31457293-31457312 | MS.gene73820:intron | 40.0% |
| ! | GAATAACAACAGTGGCTCTA+GGG | + | chr4.4:31456742-31456761 | MS.gene73820:intron | 40.0% |
| ! | GCATCAGTAACCTGATCTTT+TGG | - | chr4.4:31454100-31454119 | None:intergenic | 40.0% |
| ! | GCGGATTATATAGTCCTACT+CGG | - | chr4.4:31455635-31455654 | None:intergenic | 40.0% |
| ! | GGTGCCATATAAATTAGGCA+TGG | - | chr4.4:31453695-31453714 | None:intergenic | 40.0% |
| ! | TCATCGTTTTCCAACCACTA+GGG | - | chr4.4:31456684-31456703 | None:intergenic | 40.0% |
| ! | TCCGCAAAAAGTATGCATCT+CGG | + | chr4.4:31455650-31455669 | MS.gene73820:intron | 40.0% |
| ! | TCTTTTATGTTTGAGGGTGG+GGG | + | chr4.4:31457296-31457315 | MS.gene73820:intron | 40.0% |
| !! | AATAACAACAGTGGCTCTAG+GGG | + | chr4.4:31456743-31456762 | MS.gene73820:intron | 40.0% |
| !! | ACCAACATGTGATTGGTTTG+AGG | - | chr4.4:31456984-31457003 | None:intergenic | 40.0% |
| !! | ACCGAGATGCATACTTTTTG+CGG | - | chr4.4:31455654-31455673 | None:intergenic | 40.0% |
| !! | AGATAGTGGAAACTCAGCTT+AGG | - | chr4.4:31455162-31455181 | None:intergenic | 40.0% |
| !! | CCAACATGTGATTGGTTTGA+GGG | - | chr4.4:31456983-31457002 | None:intergenic | 40.0% |
| !! | TAAGATCGACGGTGTTGTAT+GGG | - | chr4.4:31455275-31455294 | None:intergenic | 40.0% |
| !!! | CCGCCTTGTTTTCTTAAAAC+CGG | - | chr4.4:31458520-31458539 | None:intergenic | 40.0% |
| !!! | CCGGTTTTAAGAAAACAAGG+CGG | + | chr4.4:31458517-31458536 | MS.gene73820:intron | 40.0% |
| AAATAAAGGGAAGAGGGAGG+AGG | - | chr4.4:31457809-31457828 | None:intergenic | 45.0% | |
| AACTCCTAGTTAGAACCCCT+TGG | - | chr4.4:31456368-31456387 | None:intergenic | 45.0% | |
| ACCCTGTTTAAACCAGCTAG+AGG | - | chr4.4:31453282-31453301 | None:intergenic | 45.0% | |
| ACTCCTAGTTAGAACCCCTT+GGG | - | chr4.4:31456367-31456386 | None:intergenic | 45.0% | |
| ACTGCAAGTGCACCTATATG+TGG | - | chr4.4:31457401-31457420 | None:intergenic | 45.0% | |
| AGGAAATGCAGCTCTACATG+CGG | - | chr4.4:31453169-31453188 | None:intergenic | 45.0% | |
| AGGAGAGTAGCTCATATGGA+GGG | - | chr4.4:31455111-31455130 | None:intergenic | 45.0% | |
| AGTCATATCACAAGAGGCAG+AGG | - | chr4.4:31455087-31455106 | None:intergenic | 45.0% | |
| AGTGGTTGTGTTCGCTTTCA+GGG | - | chr4.4:31456403-31456422 | None:intergenic | 45.0% | |
| ATATCATGTCTTCTGCCTCC+AGG | - | chr4.4:31452966-31452985 | None:intergenic | 45.0% | |
| ATGATCACCATGGATGTGGA+CGG | + | chr4.4:31452895-31452914 | MS.gene73820:CDS | 45.0% | |
| ATTCTAGACCGACCATGTGT+TGG | - | chr4.4:31457252-31457271 | None:intergenic | 45.0% | |
| ATTTATGCCGTCCACATCCA+TGG | - | chr4.4:31452905-31452924 | None:intergenic | 45.0% | |
| ATTTCCATGCAATCCCCTAG+TGG | + | chr4.4:31456667-31456686 | MS.gene73820:intron | 45.0% | |
| CAGTCCAACACCATGATACA+TGG | - | chr4.4:31456250-31456269 | None:intergenic | 45.0% | |
| CAGTTCAATTGGTGAGCTGA+GGG | + | chr4.4:31456338-31456357 | MS.gene73820:intron | 45.0% | |
| CCACTTAGTTGGATAAGGCT+TGG | - | chr4.4:31454948-31454967 | None:intergenic | 45.0% | |
| CCCTCAAACCAATCACATGT+TGG | + | chr4.4:31456980-31456999 | MS.gene73820:intron | 45.0% | |
| CGGAGATGAAGATGTTGTGT+TGG | - | chr4.4:31455203-31455222 | None:intergenic | 45.0% | |
| CGTCACCACTTAGTTGGATA+AGG | - | chr4.4:31454953-31454972 | None:intergenic | 45.0% | |
| CGTCCCATATAGATTAGGCA+TGG | - | chr4.4:31453551-31453570 | None:intergenic | 45.0% | |
| CTAGTGGTTGGAAAACGATG+AGG | + | chr4.4:31456683-31456702 | MS.gene73820:intron | 45.0% | |
| GAAACTCAGCTTAGGTGGTT+TGG | - | chr4.4:31455154-31455173 | None:intergenic | 45.0% | |
| GAACTTCTACATTAGGGTGC+AGG | + | chr4.4:31457044-31457063 | MS.gene73820:intron | 45.0% | |
| GAATCAGATGCAGACTGTTG+GGG | + | chr4.4:31453985-31454004 | MS.gene73820:CDS | 45.0% | |
| GAGAAATAAAGGGAAGAGGG+AGG | - | chr4.4:31457812-31457831 | None:intergenic | 45.0% | |
| GAGAATCAGATGCAGACTGT+TGG | + | chr4.4:31453983-31454002 | MS.gene73820:CDS | 45.0% | |
| GAGGGTAGTCATATCACAAG+AGG | - | chr4.4:31455093-31455112 | None:intergenic | 45.0% | |
| GCACGTTAAGCAAGTGGTTA+AGG | - | chr4.4:31456947-31456966 | None:intergenic | 45.0% | |
| GCATTGTAGTCAAAGCCATG+TGG | + | chr4.4:31453234-31453253 | MS.gene73820:intron | 45.0% | |
| GGATCAGGTGTCTTTGACAT+GGG | + | chr4.4:31457066-31457085 | MS.gene73820:intron | 45.0% | |
| GGATGTGGACGGCATAAATT+GGG | + | chr4.4:31452906-31452925 | MS.gene73820:CDS | 45.0% | |
| GGCAGAAGACATGATATACG+AGG | + | chr4.4:31452969-31452988 | MS.gene73820:CDS | 45.0% | |
| GGGGTGATTGAAATGGAAGA+GGG | - | chr4.4:31455365-31455384 | None:intergenic | 45.0% | |
| GTTGTATGGGATGGAGTGTA+GGG | - | chr4.4:31455262-31455281 | None:intergenic | 45.0% | |
| GTTTGTGTTTCGTGGATCGT+AGG | - | chr4.4:31457513-31457532 | None:intergenic | 45.0% | |
| TAGGAGAGTAGCTCATATGG+AGG | - | chr4.4:31455112-31455131 | None:intergenic | 45.0% | |
| TAGTGGAAACTCAGCTTAGG+TGG | - | chr4.4:31455159-31455178 | None:intergenic | 45.0% | |
| TAGTGGTTGTGTTCGCTTTC+AGG | - | chr4.4:31456404-31456423 | None:intergenic | 45.0% | |
| TCCAACAGGTTACTGTCAAC+CGG | - | chr4.4:31456860-31456879 | None:intergenic | 45.0% | |
| TGAATCCTCGGTTGTTTGCT+TGG | - | chr4.4:31454179-31454198 | None:intergenic | 45.0% | |
| TGACAGTAACCTGTTGGACA+CGG | + | chr4.4:31456862-31456881 | MS.gene73820:intron | 45.0% | |
| TGAGCAGTTCCCTTATGTTC+TGG | + | chr4.4:31454561-31454580 | MS.gene73820:CDS | 45.0% | |
| TGGATGTGGACGGCATAAAT+TGG | + | chr4.4:31452905-31452924 | MS.gene73820:CDS | 45.0% | |
| TGGGGTGATTGAAATGGAAG+AGG | - | chr4.4:31455366-31455385 | None:intergenic | 45.0% | |
| TGGTTGGAAAACGATGAGGT+TGG | + | chr4.4:31456687-31456706 | MS.gene73820:intron | 45.0% | |
| TGTAGAGCTGCATTTCCTCT+TGG | + | chr4.4:31453171-31453190 | MS.gene73820:intron | 45.0% | |
| TGTTGTATGGGATGGAGTGT+AGG | - | chr4.4:31455263-31455282 | None:intergenic | 45.0% | |
| TTAAACAGGGTCCTTTAGCG+AGG | + | chr4.4:31453291-31453310 | MS.gene73820:intron | 45.0% | |
| ! | ATGGTGGTTCTATCTCATCC+AGG | + | chr4.4:31454773-31454792 | MS.gene73820:CDS | 45.0% |
| ! | CATCGTTTTCCAACCACTAG+GGG | - | chr4.4:31456683-31456702 | None:intergenic | 45.0% |
| ! | CCAAGCCTTATCCAACTAAG+TGG | + | chr4.4:31454945-31454964 | MS.gene73820:intron | 45.0% |
| ! | CTCATCGTTTTCCAACCACT+AGG | - | chr4.4:31456685-31456704 | None:intergenic | 45.0% |
| ! | GCAAAACAATTTTCCGGAGC+AGG | + | chr4.4:31456315-31456334 | MS.gene73820:intron | 45.0% |
| ! | GCCTCTAGCTGGTTTAAACA+GGG | + | chr4.4:31453278-31453297 | MS.gene73820:intron | 45.0% |
| ! | GTATCATGGTGTTGGACTGT+TGG | + | chr4.4:31456251-31456270 | MS.gene73820:intron | 45.0% |
| !! | AAAGCCAGCTTTGGATGAAG+TGG | + | chr4.4:31454486-31454505 | MS.gene73820:CDS | 45.0% |
| !! | ATTGCGAGTTGGTTACTGTC+TGG | + | chr4.4:31457583-31457602 | MS.gene73820:intron | 45.0% |
| !! | GGCTTTGAAACACTAGCTAC+AGG | - | chr4.4:31454472-31454491 | None:intergenic | 45.0% |
| !! | GTAAGATCGACGGTGTTGTA+TGG | - | chr4.4:31455276-31455295 | None:intergenic | 45.0% |
| !! | TGTGATTGGTTTGAGGGAGA+AGG | - | chr4.4:31456977-31456996 | None:intergenic | 45.0% |
| AACAGGTTACTGTCAACCGG+TGG | - | chr4.4:31456857-31456876 | None:intergenic | 50.0% | |
| AAGGAGCTTGCAGTATGGCA+TGG | + | chr4.4:31458585-31458604 | MS.gene73820:CDS | 50.0% | |
| ACCAATTGAACTGCCTGCTC+CGG | - | chr4.4:31456331-31456350 | None:intergenic | 50.0% | |
| ACCGGTTGACAGTAACCTGT+TGG | + | chr4.4:31456856-31456875 | MS.gene73820:intron | 50.0% | |
| AGAAAATGAGGTGGCTTCGC+AGG | - | chr4.4:31457765-31457784 | None:intergenic | 50.0% | |
| AGGATCGTGAGTCAGATCGT+GGG | + | chr4.4:31457477-31457496 | MS.gene73820:intron | 50.0% | |
| AGTAACCTGTTGGACACGGA+AGG | + | chr4.4:31456866-31456885 | MS.gene73820:intron | 50.0% | |
| AGTCCCCTCGGAAGAAAATG+AGG | - | chr4.4:31457777-31457796 | None:intergenic | 50.0% | |
| ATCTCTTGCTTCTACTCGGG+CGG | + | chr4.4:31455543-31455562 | MS.gene73820:intron | 50.0% | |
| CCACACAGCTGTAAGATCGA+CGG | - | chr4.4:31455286-31455305 | None:intergenic | 50.0% | |
| CTCTGCTCAGATCTTCGTGA+TGG | + | chr4.4:31457692-31457711 | MS.gene73820:intron | 50.0% | |
| GCAGTTCAATTGGTGAGCTG+AGG | + | chr4.4:31456337-31456356 | MS.gene73820:intron | 50.0% | |
| GCGGAGACTAGACAAGATAG+TGG | - | chr4.4:31455176-31455195 | None:intergenic | 50.0% | |
| GGGATCAGGTGTCTTTGACA+TGG | + | chr4.4:31457065-31457084 | MS.gene73820:intron | 50.0% | |
| GTGGACGGCATAAATTGGGT+TGG | + | chr4.4:31452910-31452929 | MS.gene73820:CDS | 50.0% | |
| TACATTAGGGTGCAGGGATC+AGG | + | chr4.4:31457051-31457070 | MS.gene73820:intron | 50.0% | |
| TAGGATCGTGAGTCAGATCG+TGG | + | chr4.4:31457476-31457495 | MS.gene73820:intron | 50.0% | |
| TGATCCACGACTCTCGCAAA+TGG | - | chr4.4:31456921-31456940 | None:intergenic | 50.0% | |
| TGTAGCCGTCACCACTTAGT+TGG | - | chr4.4:31454959-31454978 | None:intergenic | 50.0% | |
| TTCGTGGATCGTAGGATCGT+GGG | - | chr4.4:31457505-31457524 | None:intergenic | 50.0% | |
| TTCTCCATTTGCGAGAGTCG+TGG | + | chr4.4:31456914-31456933 | MS.gene73820:intron | 50.0% | |
| TTTCGTGGATCGTAGGATCG+TGG | - | chr4.4:31457506-31457525 | None:intergenic | 50.0% | |
| ! | ACACCCAAGGGGTTCTAACT+AGG | + | chr4.4:31456361-31456380 | MS.gene73820:intron | 50.0% |
| ! | AGCCACCTCATTTTCTTCCG+AGG | + | chr4.4:31457769-31457788 | MS.gene73820:intron | 50.0% |
| ! | AGGTACGAAGTATCCACCAC+CGG | + | chr4.4:31456838-31456857 | MS.gene73820:intron | 50.0% |
| ! | ATGTTTAAGGCGCCTCTAGC+TGG | + | chr4.4:31453357-31453376 | MS.gene73820:intron | 50.0% |
| ! | CCACCTCATTTTCTTCCGAG+GGG | + | chr4.4:31457771-31457790 | MS.gene73820:intron | 50.0% |
| ! | CGCCTCTAGCTGGTTTAAAC+AGG | + | chr4.4:31453277-31453296 | MS.gene73820:intron | 50.0% |
| ! | CTTGCCACTTCATCCAAAGC+TGG | - | chr4.4:31454493-31454512 | None:intergenic | 50.0% |
| ! | GCCACCTCATTTTCTTCCGA+GGG | + | chr4.4:31457770-31457789 | MS.gene73820:intron | 50.0% |
| ! | GTTGGACTGTTGGCTGCTTT+AGG | + | chr4.4:31456261-31456280 | MS.gene73820:intron | 50.0% |
| !! | ACTAAGTGGTGACGGCTACA+TGG | + | chr4.4:31454959-31454978 | MS.gene73820:intron | 50.0% |
| !! | ATCGACGGTGTTGTATGGGA+TGG | - | chr4.4:31455271-31455290 | None:intergenic | 50.0% |
| AAATGAGGTGGCTTCGCAGG+TGG | - | chr4.4:31457762-31457781 | None:intergenic | 55.0% | |
| ACCTTCGGATGCTTGCCACA+TGG | - | chr4.4:31453252-31453271 | None:intergenic | 55.0% | |
| ACTCACCTTCCGTGTCCAAC+AGG | - | chr4.4:31456874-31456893 | None:intergenic | 55.0% | |
| AGGTTACTGTCAACCGGTGG+TGG | - | chr4.4:31456854-31456873 | None:intergenic | 55.0% | |
| AGTCCTACTCGGAGAGTCGA+GGG | - | chr4.4:31455624-31455643 | None:intergenic | 55.0% | |
| CAGGCCGTGAGAGAAGAAAG+AGG | - | chr4.4:31457723-31457742 | None:intergenic | 55.0% | |
| CCAACCACTAGGGGATTGCA+TGG | - | chr4.4:31456674-31456693 | None:intergenic | 55.0% | |
| CCATGCAATCCCCTAGTGGT+TGG | + | chr4.4:31456671-31456690 | MS.gene73820:intron | 55.0% | |
| CCCCTCGGAAGAAAATGAGG+TGG | - | chr4.4:31457774-31457793 | None:intergenic | 55.0% | |
| CCGTCGATCTTACAGCTGTG+TGG | + | chr4.4:31455283-31455302 | MS.gene73820:intron | 55.0% | |
| GATACACGCACGCCATCACA+AGG | + | chr4.4:31454418-31454437 | MS.gene73820:CDS | 55.0% | |
| GCGGAAGCGATACGCTTCTA+AGG | + | chr4.4:31455562-31455581 | MS.gene73820:intron | 55.0% | |
| GGTTTGAGGGAGAAGGAGCA+CGG | - | chr4.4:31456970-31456989 | None:intergenic | 55.0% | |
| TAGTCCTACTCGGAGAGTCG+AGG | - | chr4.4:31455625-31455644 | None:intergenic | 55.0% | |
| TATGTTTGAGGGTGGGGGCA+TGG | + | chr4.4:31457301-31457320 | MS.gene73820:intron | 55.0% | |
| TCCGGAGCAGGCAGTTCAAT+TGG | + | chr4.4:31456327-31456346 | MS.gene73820:intron | 55.0% | |
| TTGAAATGGAAGAGGGCCCC+AGG | - | chr4.4:31455358-31455377 | None:intergenic | 55.0% | |
| ! | GTTTGAGGGAGAAGGAGCAC+GGG | - | chr4.4:31456969-31456988 | None:intergenic | 55.0% |
| ! | TGCATCTCGGTGATGGCTCT+TGG | + | chr4.4:31455663-31455682 | MS.gene73820:intron | 55.0% |
| ! | TGGAGGAAGGTGTGAGAGAC+AGG | - | chr4.4:31457742-31457761 | None:intergenic | 55.0% |
| ! | TGTGATGGCGTGCGTGTATC+TGG | - | chr4.4:31454418-31454437 | None:intergenic | 55.0% |
| AAGGTCTCAGCGCCTCTAGC+TGG | + | chr4.4:31453267-31453286 | MS.gene73820:intron | 60.0% | |
| CTTCCGAGGGGACTGTGACA+CGG | + | chr4.4:31457783-31457802 | MS.gene73820:intron | 60.0% | |
| GCACGGGCACGTTAAGCAAG+TGG | - | chr4.4:31456953-31456972 | None:intergenic | 60.0% | |
| GCAGCTCTACATGCGGCAGT+GGG | - | chr4.4:31453162-31453181 | None:intergenic | 60.0% | |
| GCCATGTGGCAAGCATCCGA+AGG | + | chr4.4:31453248-31453267 | MS.gene73820:intron | 60.0% | |
| GTGAGCTGAGGGACACCCAA+GGG | + | chr4.4:31456349-31456368 | MS.gene73820:intron | 60.0% | |
| TGAGCTGAGGGACACCCAAG+GGG | + | chr4.4:31456350-31456369 | MS.gene73820:intron | 60.0% | |
| TGCAGCTCTACATGCGGCAG+TGG | - | chr4.4:31453163-31453182 | None:intergenic | 60.0% | |
| !! | GCTAGAGGCGCTGAGACCTT+CGG | - | chr4.4:31453267-31453286 | None:intergenic | 60.0% |
| AGGCCGTGTCACAGTCCCCT+CGG | - | chr4.4:31457789-31457808 | None:intergenic | 65.0% | |
| CCTACTCGGAGAGTCGAGGG+AGG | - | chr4.4:31455621-31455640 | None:intergenic | 65.0% | |
| CCTCCCTCGACTCTCCGAGT+AGG | + | chr4.4:31455618-31455637 | MS.gene73820:intron | 65.0% | |
| GGTGAGCTGAGGGACACCCA+AGG | + | chr4.4:31456348-31456367 | MS.gene73820:intron | 65.0% | |
| GTGGCTTCGCAGGTGGAGGA+AGG | - | chr4.4:31457755-31457774 | None:intergenic | 65.0% | |
| TGAGGTGGCTTCGCAGGTGG+AGG | - | chr4.4:31457759-31457778 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 31452895 | 31458722 | 31452895 | ID=MS.gene73820 |
| chr4.4 | mRNA | 31452895 | 31458722 | 31452895 | ID=MS.gene73820.t1;Parent=MS.gene73820 |
| chr4.4 | exon | 31452895 | 31452990 | 31452895 | ID=MS.gene73820.t1.exon1;Parent=MS.gene73820.t1 |
| chr4.4 | CDS | 31452895 | 31452990 | 31452895 | ID=cds.MS.gene73820.t1;Parent=MS.gene73820.t1 |
| chr4.4 | exon | 31453965 | 31454634 | 31453965 | ID=MS.gene73820.t1.exon2;Parent=MS.gene73820.t1 |
| chr4.4 | CDS | 31453965 | 31454634 | 31453965 | ID=cds.MS.gene73820.t1;Parent=MS.gene73820.t1 |
| chr4.4 | exon | 31454726 | 31454794 | 31454726 | ID=MS.gene73820.t1.exon3;Parent=MS.gene73820.t1 |
| chr4.4 | CDS | 31454726 | 31454794 | 31454726 | ID=cds.MS.gene73820.t1;Parent=MS.gene73820.t1 |
| chr4.4 | exon | 31458311 | 31458429 | 31458311 | ID=MS.gene73820.t1.exon4;Parent=MS.gene73820.t1 |
| chr4.4 | CDS | 31458311 | 31458429 | 31458311 | ID=cds.MS.gene73820.t1;Parent=MS.gene73820.t1 |
| chr4.4 | exon | 31458528 | 31458722 | 31458528 | ID=MS.gene73820.t1.exon5;Parent=MS.gene73820.t1 |
| chr4.4 | CDS | 31458528 | 31458722 | 31458528 | ID=cds.MS.gene73820.t1;Parent=MS.gene73820.t1 |
| Gene Sequence |
| Protein sequence |
