Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057601.t1 | XP_003604693.2 | 77.7 | 521 | 86 | 2 | 1 | 491 | 168 | 688 | 1.10E-210 | 742.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057601.t1 | Q9H7Z3 | 29.5 | 275 | 133 | 7 | 93 | 325 | 293 | 548 | 3.9e-18 | 94.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057601.t1 | G7JP36 | 77.7 | 521 | 86 | 2 | 1 | 491 | 168 | 688 | 8.2e-211 | 742.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049435 | MS.gene057601 | 0.808697 | 2.73E-50 | -1.69E-46 |
| MS.gene051800 | MS.gene057601 | 0.808232 | 3.43E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene057601 | 0.881398 | 2.48E-70 | -1.69E-46 |
| MS.gene057599 | MS.gene057601 | 0.90493 | 7.33E-80 | -1.69E-46 |
| MS.gene057600 | MS.gene057601 | 0.871512 | 6.46E-67 | -1.69E-46 |
| MS.gene057601 | MS.gene057855 | 0.832471 | 9.28E-56 | -1.69E-46 |
| MS.gene057601 | MS.gene058010 | 0.826298 | 2.93E-54 | -1.69E-46 |
| MS.gene057601 | MS.gene058979 | 0.804436 | 2.16E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene063407 | 0.811945 | 5.43E-51 | -1.69E-46 |
| MS.gene057601 | MS.gene067173 | 0.813962 | 1.96E-51 | -1.69E-46 |
| MS.gene057601 | MS.gene06723 | 0.807611 | 4.65E-50 | -1.69E-46 |
| MS.gene057601 | MS.gene06740 | 0.802233 | 6.18E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene068526 | 0.805819 | 1.11E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene069519 | 0.839412 | 1.61E-57 | -1.69E-46 |
| MS.gene057601 | MS.gene072041 | 0.824527 | 7.69E-54 | -1.69E-46 |
| MS.gene057601 | MS.gene072994 | 0.820519 | 6.57E-53 | -1.69E-46 |
| MS.gene057601 | MS.gene073008 | 0.80809 | 3.67E-50 | -1.69E-46 |
| MS.gene057601 | MS.gene073016 | -0.808974 | 2.38E-50 | -1.69E-46 |
| MS.gene057601 | MS.gene073853 | 0.803801 | 2.93E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene074604 | 0.80031 | 1.53E-48 | -1.69E-46 |
| MS.gene057601 | MS.gene07510 | 0.814915 | 1.21E-51 | -1.69E-46 |
| MS.gene057601 | MS.gene20859 | 0.811669 | 6.24E-51 | -1.69E-46 |
| MS.gene057601 | MS.gene24067 | 0.808707 | 2.71E-50 | -1.69E-46 |
| MS.gene057601 | MS.gene25985 | 0.802483 | 5.49E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene26498 | 0.802526 | 5.38E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene30301 | 0.808323 | 3.28E-50 | -1.69E-46 |
| MS.gene057601 | MS.gene34065 | 0.819396 | 1.19E-52 | -1.69E-46 |
| MS.gene057601 | MS.gene40381 | -0.802627 | 5.13E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene41838 | 0.811128 | 8.18E-51 | -1.69E-46 |
| MS.gene057601 | MS.gene41878 | 0.802068 | 6.68E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene43430 | 0.81837 | 2.03E-52 | -1.69E-46 |
| MS.gene057601 | MS.gene43973 | 0.83094 | 2.21E-55 | -1.69E-46 |
| MS.gene057601 | MS.gene44392 | 0.80399 | 2.68E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene45613 | 0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene45641 | 0.802977 | 4.34E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene50639 | 0.806811 | 6.86E-50 | -1.69E-46 |
| MS.gene057601 | MS.gene52437 | 0.81044 | 1.15E-50 | -1.69E-46 |
| MS.gene057601 | MS.gene60935 | 0.802204 | 6.27E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene62250 | 0.802746 | 4.85E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene64772 | 0.804823 | 1.80E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene67007 | 0.808868 | 2.51E-50 | -1.69E-46 |
| MS.gene057601 | MS.gene67662 | 0.811601 | 6.45E-51 | -1.69E-46 |
| MS.gene057601 | MS.gene67893 | 0.804564 | 2.03E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene70910 | 0.816438 | 5.53E-52 | -1.69E-46 |
| MS.gene057601 | MS.gene75866 | 0.826347 | 2.85E-54 | -1.69E-46 |
| MS.gene057601 | MS.gene76317 | 0.805295 | 1.43E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene77356 | 0.806176 | 9.34E-50 | -1.69E-46 |
| MS.gene057601 | MS.gene79285 | 0.840573 | 8.02E-58 | -1.69E-46 |
| MS.gene057601 | MS.gene80574 | 0.812624 | 3.86E-51 | -1.69E-46 |
| MS.gene057601 | MS.gene82806 | 0.805499 | 1.30E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene82879 | 0.801944 | 7.09E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene84840 | 0.800263 | 1.56E-48 | -1.69E-46 |
| MS.gene057601 | MS.gene90386 | 0.801376 | 9.27E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene90431 | 0.805422 | 1.35E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene90525 | 0.815071 | 1.12E-51 | -1.69E-46 |
| MS.gene057601 | MS.gene90585 | 0.817914 | 2.58E-52 | -1.69E-46 |
| MS.gene057601 | MS.gene91208 | 0.812477 | 4.16E-51 | -1.69E-46 |
| MS.gene057601 | MS.gene93340 | 0.812495 | 4.12E-51 | -1.69E-46 |
| MS.gene057601 | MS.gene95096 | 0.802633 | 5.11E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene96073 | 0.801779 | 7.66E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene96210 | 0.859213 | 4.83E-63 | -1.69E-46 |
| MS.gene057601 | MS.gene99986 | 0.820847 | 5.52E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057601.t1 | MTR_4g016590 | 43.621 | 243 | 98 | 6 | 187 | 395 | 355 | 592 | 9.65e-44 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057601.t1 | AT3G17712 | 28.194 | 227 | 130 | 7 | 187 | 395 | 376 | 587 | 1.52e-13 | 73.9 |
| MS.gene057601.t1 | AT3G17740 | 48.780 | 82 | 36 | 3 | 317 | 395 | 503 | 581 | 1.61e-13 | 73.9 |
| MS.gene057601.t1 | AT3G17712 | 28.194 | 227 | 130 | 7 | 187 | 395 | 345 | 556 | 2.40e-13 | 73.2 |
| MS.gene057601.t1 | AT3G17712 | 48.780 | 82 | 36 | 3 | 317 | 395 | 503 | 581 | 4.78e-13 | 72.0 |
Find 0 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAATAAATTGAAAAAAGA+TGG | + | 33146:3576-3595 | MS.gene057601:intergenic | 15.0% |
| !! | ATGAAATGTTAAATAAAACC+AGG | - | 33146:3089-3108 | MS.gene057601:CDS | 20.0% |
| !! | GGATGAATGATAATATTATA+GGG | - | 33146:3632-3651 | MS.gene057601:CDS | 20.0% |
| !! | TGAAATGTTAAATAAAACCA+GGG | - | 33146:3090-3109 | MS.gene057601:CDS | 20.0% |
| !! | TGGATGAATGATAATATTAT+AGG | - | 33146:3631-3650 | MS.gene057601:CDS | 20.0% |
| !!! | AAATGAAATTGACATTGATT+TGG | - | 33146:4322-4341 | MS.gene057601:CDS | 20.0% |
| !!! | GTCAATTTCATTTTCAAAAT+TGG | + | 33146:4315-4334 | MS.gene057601:intergenic | 20.0% |
| ! | AAAATACTCTTACAACATTC+TGG | - | 33146:3357-3376 | MS.gene057601:CDS | 25.0% |
| ! | TCCAAAATGTAAGCAAAAAT+AGG | + | 33146:3787-3806 | MS.gene057601:intergenic | 25.0% |
| ! | TGAAAAGAAAATTAGCATTC+TGG | - | 33146:3231-3250 | MS.gene057601:CDS | 25.0% |
| ! | TTTATACCTTTATCAGATGT+TGG | - | 33146:2998-3017 | MS.gene057601:intron | 25.0% |
| !! | AGTAATAGATTTTCATTCTC+TGG | + | 33146:3277-3296 | MS.gene057601:intergenic | 25.0% |
| !! | GTAATAGATTTTCATTCTCT+GGG | + | 33146:3276-3295 | MS.gene057601:intergenic | 25.0% |
| !! | TTCCATTTAAAACCTATTTG+AGG | + | 33146:3887-3906 | MS.gene057601:intergenic | 25.0% |
| !!! | AATTGACATTGATTTGGTTA+TGG | - | 33146:4328-4347 | MS.gene057601:CDS | 25.0% |
| !!! | ACCTATTTTTGCTTACATTT+TGG | - | 33146:3783-3802 | MS.gene057601:intron | 25.0% |
| !!! | ATCCTCAAATAGGTTTTAAA+TGG | - | 33146:3882-3901 | MS.gene057601:intron | 25.0% |
| !!! | CTTGTTTGATAAGCTTTAAA+AGG | + | 33146:3303-3322 | MS.gene057601:intergenic | 25.0% |
| !!! | GGAAAAACTTTATTTTTAGC+AGG | - | 33146:3903-3922 | MS.gene057601:intron | 25.0% |
| !!! | TGATGATGAAATTTTAGAGT+CGG | + | 33146:3050-3069 | MS.gene057601:intergenic | 25.0% |
| !!! | TGTCATTTTTATCCATTGAT+GGG | - | 33146:3742-3761 | MS.gene057601:intron | 25.0% |
| !!! | TTTTTTTTTCCCCTTAAAAG+TGG | - | 33146:3674-3693 | MS.gene057601:CDS | 25.0% |
| AAATTCTCAGTATCATCTTC+AGG | + | 33146:4392-4411 | MS.gene057601:intergenic | 30.0% | |
| AACCAAACTATTTCATCATG+CGG | + | 33146:3142-3161 | MS.gene057601:intergenic | 30.0% | |
| ACCATAGAAGTCAATGAATT+GGG | + | 33146:4838-4857 | MS.gene057601:intergenic | 30.0% | |
| AGAACCTTTGTCTAAAGATA+AGG | - | 33146:4280-4299 | MS.gene057601:intron | 30.0% | |
| ATAATCCCTTGAATATGTCT+GGG | - | 33146:2774-2793 | MS.gene057601:CDS | 30.0% | |
| ATAGCTCAGATGTGTTAATT+GGG | - | 33146:3325-3344 | MS.gene057601:CDS | 30.0% | |
| ATCATCACTTGAAGAATCTT+GGG | - | 33146:3063-3082 | MS.gene057601:intron | 30.0% | |
| ATGATAAAATGAAGTCTGCT+GGG | - | 33146:2873-2892 | MS.gene057601:CDS | 30.0% | |
| ATGTTAAAGGTTTGTATTGG+TGG | - | 33146:2801-2820 | MS.gene057601:CDS | 30.0% | |
| ATTACTAAGTGACACAATCA+TGG | + | 33146:3834-3853 | MS.gene057601:intergenic | 30.0% | |
| ATTCACGCAAAAATAAGAAG+AGG | + | 33146:3542-3561 | MS.gene057601:intergenic | 30.0% | |
| ATTTCAGAAGATCCTCAAAT+AGG | - | 33146:3872-3891 | MS.gene057601:intron | 30.0% | |
| CATGATGTTTGTAATGAAAC+TGG | + | 33146:4651-4670 | MS.gene057601:intergenic | 30.0% | |
| GACATATTCAAGGGATTATA+CGG | + | 33146:2773-2792 | MS.gene057601:intergenic | 30.0% | |
| GACATGTTAAAGGTTTGTAT+TGG | - | 33146:2798-2817 | MS.gene057601:CDS | 30.0% | |
| TATAATCCCTTGAATATGTC+TGG | - | 33146:2773-2792 | MS.gene057601:CDS | 30.0% | |
| TGGGAATTGATATTAATGCT+GGG | - | 33146:4424-4443 | MS.gene057601:CDS | 30.0% | |
| TTCACGCAAAAATAAGAAGA+GGG | + | 33146:3541-3560 | MS.gene057601:intergenic | 30.0% | |
| ! | ATTCTGGAAGTTACAAGTTA+TGG | - | 33146:3373-3392 | MS.gene057601:CDS | 30.0% |
| ! | TTATCTTGTTTGAACAGACT+TGG | - | 33146:3591-3610 | MS.gene057601:CDS | 30.0% |
| !! | AATTCATTGACTTCTATGGT+GGG | - | 33146:4838-4857 | MS.gene057601:CDS | 30.0% |
| !! | ATTTTCCAACCACTTTTAAG+GGG | + | 33146:3686-3705 | MS.gene057601:intergenic | 30.0% |
| !! | CATTTTCCAACCACTTTTAA+GGG | + | 33146:3687-3706 | MS.gene057601:intergenic | 30.0% |
| !! | TCATTTTCCAACCACTTTTA+AGG | + | 33146:3688-3707 | MS.gene057601:intergenic | 30.0% |
| !! | TTCTAAAGCCATATACTTTC+CGG | + | 33146:2909-2928 | MS.gene057601:intergenic | 30.0% |
| !!! | CTGTCATTTTTATCCATTGA+TGG | - | 33146:3741-3760 | MS.gene057601:intron | 30.0% |
| !!! | GATGATGAAATTTTAGAGTC+GGG | + | 33146:3049-3068 | MS.gene057601:intergenic | 30.0% |
| AAAAGAGGCTCGACTATATT+TGG | - | 33146:4809-4828 | MS.gene057601:CDS | 35.0% | |
| AACTCATCTTGTGTTGTATG+AGG | + | 33146:2980-2999 | MS.gene057601:intergenic | 35.0% | |
| AACTTTGTTCTTCCCATCAA+TGG | + | 33146:3757-3776 | MS.gene057601:intergenic | 35.0% | |
| AAGTTAATGACACTTTGACC+TGG | - | 33146:4457-4476 | MS.gene057601:CDS | 35.0% | |
| AATTCTTGCATGTTGTTCAG+AGG | - | 33146:3400-3419 | MS.gene057601:CDS | 35.0% | |
| ACCAAACTATTTCATCATGC+GGG | + | 33146:3141-3160 | MS.gene057601:intergenic | 35.0% | |
| ACCTTTGTCTAAAGATAAGG+AGG | - | 33146:4283-4302 | MS.gene057601:intron | 35.0% | |
| AGATGTGTTAATTGGGAGAT+GGG | - | 33146:3332-3351 | MS.gene057601:CDS | 35.0% | |
| ATTGATATTAATGCTGGGGA+TGG | - | 33146:4429-4448 | MS.gene057601:CDS | 35.0% | |
| CACCATAGAAGTCAATGAAT+TGG | + | 33146:4839-4858 | MS.gene057601:intergenic | 35.0% | |
| CATCATCACTTGAAGAATCT+TGG | - | 33146:3062-3081 | MS.gene057601:intron | 35.0% | |
| CCTTTGTCTAAAGATAAGGA+GGG | - | 33146:4284-4303 | MS.gene057601:intron | 35.0% | |
| CTGGGAATTGATATTAATGC+TGG | - | 33146:4423-4442 | MS.gene057601:CDS | 35.0% | |
| GATAGCTCAGATGTGTTAAT+TGG | - | 33146:3324-3343 | MS.gene057601:CDS | 35.0% | |
| GATGATAAAATGAAGTCTGC+TGG | - | 33146:2872-2891 | MS.gene057601:CDS | 35.0% | |
| GATGTACCAACATCTGATAA+AGG | + | 33146:3007-3026 | MS.gene057601:intergenic | 35.0% | |
| GGGAATTGATATTAATGCTG+GGG | - | 33146:4425-4444 | MS.gene057601:CDS | 35.0% | |
| TATGGAGGATAATCAAGATG+AGG | - | 33146:4346-4365 | MS.gene057601:CDS | 35.0% | |
| TTGATATTAATGCTGGGGAT+GGG | - | 33146:4430-4449 | MS.gene057601:CDS | 35.0% | |
| ! | AACGACTGTTTGAGCATTTT+TGG | - | 33146:4118-4137 | MS.gene057601:CDS | 35.0% |
| ! | GAAAATTAGCATTCTGGAGA+AGG | - | 33146:3237-3256 | MS.gene057601:CDS | 35.0% |
| ! | GTTGTATGAGGTGACAATTT+TGG | + | 33146:2968-2987 | MS.gene057601:intergenic | 35.0% |
| ! | TTGTATTGGTGGAATCAAAG+TGG | - | 33146:2812-2831 | MS.gene057601:CDS | 35.0% |
| ! | TTTTTCCCCTTAAAAGTGGT+TGG | - | 33146:3678-3697 | MS.gene057601:CDS | 35.0% |
| !! | CAATTCATTGACTTCTATGG+TGG | - | 33146:4837-4856 | MS.gene057601:CDS | 35.0% |
| !! | TCCCAATTCATTGACTTCTA+TGG | - | 33146:4834-4853 | MS.gene057601:CDS | 35.0% |
| !! | TGACATTGATTTGGTTATGG+AGG | - | 33146:4331-4350 | MS.gene057601:CDS | 35.0% |
| !!! | GAGCATTTTTGGAATAGTCA+TGG | - | 33146:4129-4148 | MS.gene057601:CDS | 35.0% |
| AACCATGGAAACCTTGAACT+TGG | + | 33146:3433-3452 | MS.gene057601:intergenic | 40.0% | |
| ACACTTTGACCTGGATCAAA+TGG | - | 33146:4466-4485 | MS.gene057601:CDS | 40.0% | |
| ACCCGCATGATGAAATAGTT+TGG | - | 33146:3137-3156 | MS.gene057601:CDS | 40.0% | |
| AGATGGCGATATTGATGCTT+TGG | - | 33146:2850-2869 | MS.gene057601:CDS | 40.0% | |
| AGCATACATCTTCCTAACCA+TGG | + | 33146:3448-3467 | MS.gene057601:intergenic | 40.0% | |
| AGTTCAAGGTTTCCATGGTT+AGG | - | 33146:3433-3452 | MS.gene057601:CDS | 40.0% | |
| AGTTCTTGCTGAACAATTGC+AGG | + | 33146:3958-3977 | MS.gene057601:intergenic | 40.0% | |
| ATAAGGTTGCAGGAATGCAA+CGG | - | 33146:3182-3201 | MS.gene057601:CDS | 40.0% | |
| ATGCCTATTCGAAGGAAGTT+AGG | - | 33146:4525-4544 | MS.gene057601:CDS | 40.0% | |
| CAGATGTGTTAATTGGGAGA+TGG | - | 33146:3331-3350 | MS.gene057601:CDS | 40.0% | |
| CCCTCCTTATCTTTAGACAA+AGG | + | 33146:4287-4306 | MS.gene057601:intergenic | 40.0% | |
| CTACCTAACTTCCTTCGAAT+AGG | + | 33146:4531-4550 | MS.gene057601:intergenic | 40.0% | |
| CTATTCGAAGGAAGTTAGGT+AGG | - | 33146:4529-4548 | MS.gene057601:CDS | 40.0% | |
| CTCTCACATGAAAATGAAGG+CGG | - | 33146:4239-4258 | MS.gene057601:intron | 40.0% | |
| GAAGAGGTTGTATCTGTTCA+TGG | + | 33146:4696-4715 | MS.gene057601:intergenic | 40.0% | |
| GAATCAAAGTGGTTCACTTG+GGG | - | 33146:2823-2842 | MS.gene057601:CDS | 40.0% | |
| GAGCTCTCACATGAAAATGA+AGG | - | 33146:4236-4255 | MS.gene057601:intron | 40.0% | |
| GAGGAATTTCTCCAAGTTCA+AGG | - | 33146:3419-3438 | MS.gene057601:CDS | 40.0% | |
| GGAATCAAAGTGGTTCACTT+GGG | - | 33146:2822-2841 | MS.gene057601:CDS | 40.0% | |
| GGAGTTCAACAAACTGACAA+GGG | - | 33146:3111-3130 | MS.gene057601:CDS | 40.0% | |
| GTCTAAAGATAAGGAGGGTA+CGG | - | 33146:4289-4308 | MS.gene057601:CDS | 40.0% | |
| TCAAGCTGATGATTCTTCAC+CGG | - | 33146:3930-3949 | MS.gene057601:intron | 40.0% | |
| TCAGATGTTGGTACATCTCA+AGG | - | 33146:3010-3029 | MS.gene057601:intron | 40.0% | |
| TCAGTCTTTGCAGATTTGAG+TGG | - | 33146:3998-4017 | MS.gene057601:intron | 40.0% | |
| TCTCACATGAAAATGAAGGC+GGG | - | 33146:4240-4259 | MS.gene057601:intron | 40.0% | |
| TGATATTAATGCTGGGGATG+GGG | - | 33146:4431-4450 | MS.gene057601:CDS | 40.0% | |
| TGCAACCTTATCTTGGAACT+CGG | + | 33146:3173-3192 | MS.gene057601:intergenic | 40.0% | |
| TGGAATCAAAGTGGTTCACT+TGG | - | 33146:2821-2840 | MS.gene057601:CDS | 40.0% | |
| TTCAGCCTGAAATAAAGCAG+TGG | + | 33146:4046-4065 | MS.gene057601:intergenic | 40.0% | |
| TTCTTCTGACCATTTGATCC+AGG | + | 33146:4478-4497 | MS.gene057601:intergenic | 40.0% | |
| TTTCACCCTGAACACAAAAG+AGG | - | 33146:4794-4813 | MS.gene057601:CDS | 40.0% | |
| ! | AATAGTCATGGTGCTAGAGT+CGG | - | 33146:4141-4160 | MS.gene057601:CDS | 40.0% |
| ! | ATACTGGTCCGGAAAGTATA+TGG | - | 33146:2898-2917 | MS.gene057601:CDS | 40.0% |
| ! | ATTGAAGCTTTGTCTGCTTC+AGG | - | 33146:3474-3493 | MS.gene057601:CDS | 40.0% |
| ! | CTTCTAGAGATTGTGATCAG+TGG | - | 33146:4502-4521 | MS.gene057601:CDS | 40.0% |
| ! | CTTTTGTGTTCAGGGTGAAA+AGG | + | 33146:4794-4813 | MS.gene057601:intergenic | 40.0% |
| ! | TTTTGCCGAGTTCCAAGATA+AGG | - | 33146:3165-3184 | MS.gene057601:CDS | 40.0% |
| !! | AGAATTTGCTACAAGCTGCT+GGG | - | 33146:4405-4424 | MS.gene057601:CDS | 40.0% |
| !! | AGTTGCCACTGCTTTATTTC+AGG | - | 33146:4038-4057 | MS.gene057601:intron | 40.0% |
| !!! | ATTTTGGAGCAACAAGACGT+AGG | + | 33146:2952-2971 | MS.gene057601:intergenic | 40.0% |
| AGGGATTATACGGTTTGTGC+CGG | + | 33146:2763-2782 | MS.gene057601:intergenic | 45.0% | |
| ATCAGTGGATGCCTATTCGA+AGG | - | 33146:4517-4536 | MS.gene057601:CDS | 45.0% | |
| ATGTCGCCCAGACATATTCA+AGG | + | 33146:2783-2802 | MS.gene057601:intergenic | 45.0% | |
| ATGTCTGGGCGACATGTTAA+AGG | - | 33146:2788-2807 | MS.gene057601:CDS | 45.0% | |
| CTCACATGAAAATGAAGGCG+GGG | - | 33146:4241-4260 | MS.gene057601:intron | 45.0% | |
| CTCCAAGTTCAAGGTTTCCA+TGG | - | 33146:3428-3447 | MS.gene057601:CDS | 45.0% | |
| GAGTGCTTCACTAGTAGAAG+AGG | + | 33146:4712-4731 | MS.gene057601:intergenic | 45.0% | |
| GAGTTCCAAGATAAGGTTGC+AGG | - | 33146:3172-3191 | MS.gene057601:CDS | 45.0% | |
| GATATTAATGCTGGGGATGG+GGG | - | 33146:4432-4451 | MS.gene057601:CDS | 45.0% | |
| GCATTCCTGCAACCTTATCT+TGG | + | 33146:3180-3199 | MS.gene057601:intergenic | 45.0% | |
| GGGAGTTCAACAAACTGACA+AGG | - | 33146:3110-3129 | MS.gene057601:CDS | 45.0% | |
| TCACATGAAAATGAAGGCGG+GGG | - | 33146:4242-4261 | MS.gene057601:intron | 45.0% | |
| TCTTTGCAGATTTGAGTGGC+AGG | - | 33146:4002-4021 | MS.gene057601:intron | 45.0% | |
| TGCTGAACAATTGCAGGATC+CGG | + | 33146:3952-3971 | MS.gene057601:intergenic | 45.0% | |
| TGGAGAAAGAGGAGGAAACT+AGG | - | 33146:4195-4214 | MS.gene057601:intron | 45.0% | |
| TGGATGCTCAGATCACTACT+TGG | - | 33146:3611-3630 | MS.gene057601:CDS | 45.0% | |
| TGTCGCCCAGACATATTCAA+GGG | + | 33146:2782-2801 | MS.gene057601:intergenic | 45.0% | |
| ! | TCGAGCCTCTTTTGTGTTCA+GGG | + | 33146:4802-4821 | MS.gene057601:intergenic | 45.0% |
| ! | TGAAGCACTCGAAACAGAAG+AGG | - | 33146:4722-4741 | MS.gene057601:CDS | 45.0% |
| !! | GAGAATTTGCTACAAGCTGC+TGG | - | 33146:4404-4423 | MS.gene057601:CDS | 45.0% |
| !! | TGTCAGTTTGTTGAACTCCC+TGG | + | 33146:3110-3129 | MS.gene057601:intergenic | 45.0% |
| ATGAAAATGAAGGCGGGGGT+TGG | - | 33146:4246-4265 | MS.gene057601:intron | 50.0% | |
| CACATGGTTGGAGAAAGAGG+AGG | - | 33146:4187-4206 | MS.gene057601:intron | 50.0% | |
| CTCCTCTTTCTCCAACCATG+TGG | + | 33146:4189-4208 | MS.gene057601:intergenic | 50.0% | |
| CTCTGCTCTGTGAGTAGCAA+AGG | + | 33146:4093-4112 | MS.gene057601:intergenic | 50.0% | |
| GGGATTATACGGTTTGTGCC+GGG | + | 33146:2762-2781 | MS.gene057601:intergenic | 50.0% | |
| GGTTCACTTGGGGAAAGAGA+TGG | - | 33146:2833-2852 | MS.gene057601:CDS | 50.0% | |
| GTCCACATGGTTGGAGAAAG+AGG | - | 33146:4184-4203 | MS.gene057601:intron | 50.0% | |
| GTGCTAGAGTCGGAGAAGAA+GGG | - | 33146:4151-4170 | MS.gene057601:CDS | 50.0% | |
| TAGGCAACGAGTCGTCAAAG+AGG | - | 33146:4214-4233 | MS.gene057601:intron | 50.0% | |
| TGCTAGAGTCGGAGAAGAAG+GGG | - | 33146:4152-4171 | MS.gene057601:CDS | 50.0% | |
| TGCTCTGTGAGTAGCAAAGG+AGG | + | 33146:4090-4109 | MS.gene057601:intergenic | 50.0% | |
| ! | GTCGAGCCTCTTTTGTGTTC+AGG | + | 33146:4803-4822 | MS.gene057601:intergenic | 50.0% |
| CTCTCGGTTGTCCACATGGT+TGG | - | 33146:4175-4194 | MS.gene057601:CDS | 55.0% | |
| CTTCAGGCAGCAAGCACTCT+AGG | - | 33146:3490-3509 | MS.gene057601:CDS | 55.0% | |
| GCAGGAATGCAACGGCAGAA+AGG | - | 33146:3190-3209 | MS.gene057601:CDS | 55.0% | |
| GGTGCTAGAGTCGGAGAAGA+AGG | - | 33146:4150-4169 | MS.gene057601:CDS | 55.0% | |
| TGAAGTCTGCTGGGCGATAC+TGG | - | 33146:2882-2901 | MS.gene057601:CDS | 55.0% | |
| TGCAGATTTGAGTGGCAGGC+TGG | - | 33146:4006-4025 | MS.gene057601:intron | 55.0% | |
| AGGCAGCAAGCACTCTAGGC+AGG | - | 33146:3494-3513 | MS.gene057601:CDS | 60.0% | |
| GTCGGAGAAGAAGGGGCTCT+CGG | - | 33146:4159-4178 | MS.gene057601:CDS | 60.0% | |
| TCTGCTGGGCGATACTGGTC+CGG | - | 33146:2887-2906 | MS.gene057601:CDS | 60.0% | |
| !! | AATGAAGGCGGGGGTTGGTC+TGG | - | 33146:4251-4270 | MS.gene057601:intron | 60.0% |
| GGGGCTCTCGGTTGTCCACA+TGG | - | 33146:4171-4190 | MS.gene057601:CDS | 65.0% | |
| !! | AAGGCGGGGGTTGGTCTGGT+TGG | - | 33146:4255-4274 | MS.gene057601:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 33146 | gene | 2748 | 4874 | 2748 | ID=MS.gene057601 |
| 33146 | mRNA | 2748 | 4874 | 2748 | ID=MS.gene057601.t1;Parent=MS.gene057601 |
| 33146 | exon | 4287 | 4874 | 4287 | ID=MS.gene057601.t1.exon1;Parent=MS.gene057601.t1 |
| 33146 | CDS | 4287 | 4874 | 4287 | ID=cds.MS.gene057601.t1;Parent=MS.gene057601.t1 |
| 33146 | exon | 4107 | 4200 | 4107 | ID=MS.gene057601.t1.exon2;Parent=MS.gene057601.t1 |
| 33146 | CDS | 4107 | 4200 | 4107 | ID=cds.MS.gene057601.t1;Parent=MS.gene057601.t1 |
| 33146 | exon | 3076 | 3697 | 3076 | ID=MS.gene057601.t1.exon3;Parent=MS.gene057601.t1 |
| 33146 | CDS | 3076 | 3697 | 3076 | ID=cds.MS.gene057601.t1;Parent=MS.gene057601.t1 |
| 33146 | exon | 2748 | 2919 | 2748 | ID=MS.gene057601.t1.exon4;Parent=MS.gene057601.t1 |
| 33146 | CDS | 2748 | 2919 | 2748 | ID=cds.MS.gene057601.t1;Parent=MS.gene057601.t1 |
| Gene Sequence |
| Protein sequence |
