Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67007.t1 | XP_004499020.1 | 79.4 | 407 | 46 | 2 | 1 | 369 | 82 | 488 | 2.00E-167 | 598.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67007.t1 | Q9S9X4 | 55.0 | 407 | 142 | 4 | 1 | 369 | 97 | 500 | 8.1e-117 | 421.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67007.t1 | A0A1S2Y425 | 79.4 | 407 | 46 | 2 | 1 | 369 | 82 | 488 | 1.4e-167 | 598.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene67007 | 0.83908 | 1.96E-57 | -1.69E-46 |
| MS.gene049159 | MS.gene67007 | 0.875452 | 3.05E-68 | -1.69E-46 |
| MS.gene049254 | MS.gene67007 | 0.825777 | 3.90E-54 | -1.69E-46 |
| MS.gene049283 | MS.gene67007 | 0.801405 | 9.14E-49 | -1.69E-46 |
| MS.gene049368 | MS.gene67007 | 0.831104 | 2.02E-55 | -1.69E-46 |
| MS.gene049404 | MS.gene67007 | 0.819301 | 1.25E-52 | -1.69E-46 |
| MS.gene049452 | MS.gene67007 | 0.864148 | 1.50E-64 | -1.69E-46 |
| MS.gene049801 | MS.gene67007 | 0.802812 | 4.70E-49 | -1.69E-46 |
| MS.gene049983 | MS.gene67007 | 0.877505 | 5.96E-69 | -1.69E-46 |
| MS.gene050273 | MS.gene67007 | 0.818106 | 2.33E-52 | -1.69E-46 |
| MS.gene050306 | MS.gene67007 | 0.805987 | 1.02E-49 | -1.69E-46 |
| MS.gene050384 | MS.gene67007 | 0.821991 | 3.01E-53 | -1.69E-46 |
| MS.gene050386 | MS.gene67007 | 0.81206 | 5.13E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene67007 | 0.803774 | 2.97E-49 | -1.69E-46 |
| MS.gene050605 | MS.gene67007 | 0.803529 | 3.34E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene67007 | 0.823529 | 1.32E-53 | -1.69E-46 |
| MS.gene050654 | MS.gene67007 | 0.828744 | 7.58E-55 | -1.69E-46 |
| MS.gene050689 | MS.gene67007 | 0.835291 | 1.83E-56 | -1.69E-46 |
| MS.gene050737 | MS.gene67007 | 0.815678 | 8.17E-52 | -1.69E-46 |
| MS.gene050759 | MS.gene67007 | 0.846095 | 2.69E-59 | -1.69E-46 |
| MS.gene050826 | MS.gene67007 | 0.804636 | 1.96E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene67007 | 0.84691 | 1.61E-59 | -1.69E-46 |
| MS.gene050962 | MS.gene67007 | 0.837743 | 4.34E-57 | -1.69E-46 |
| MS.gene051066 | MS.gene67007 | 0.804954 | 1.69E-49 | -1.69E-46 |
| MS.gene051181 | MS.gene67007 | 0.815145 | 1.07E-51 | -1.69E-46 |
| MS.gene051198 | MS.gene67007 | 0.839957 | 1.16E-57 | -1.69E-46 |
| MS.gene051279 | MS.gene67007 | 0.805025 | 1.63E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene67007 | 0.812891 | 3.37E-51 | -1.69E-46 |
| MS.gene051363 | MS.gene67007 | 0.822878 | 1.87E-53 | -1.69E-46 |
| MS.gene051368 | MS.gene67007 | 0.808545 | 2.94E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene67007 | 0.80707 | 6.05E-50 | -1.69E-46 |
| MS.gene051800 | MS.gene67007 | 0.835491 | 1.63E-56 | -1.69E-46 |
| MS.gene052307 | MS.gene67007 | 0.812695 | 3.73E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene67007 | 0.834084 | 3.68E-56 | -1.69E-46 |
| MS.gene052516 | MS.gene67007 | 0.848356 | 6.46E-60 | -1.69E-46 |
| MS.gene052518 | MS.gene67007 | 0.802683 | 4.99E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene67007 | 0.843053 | 1.78E-58 | -1.69E-46 |
| MS.gene052674 | MS.gene67007 | 0.821458 | 3.99E-53 | -1.69E-46 |
| MS.gene052675 | MS.gene67007 | 0.819726 | 9.98E-53 | -1.69E-46 |
| MS.gene052677 | MS.gene67007 | 0.823172 | 1.60E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene67007 | 0.808281 | 3.34E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene67007 | 0.856515 | 3.05E-62 | -1.69E-46 |
| MS.gene052954 | MS.gene67007 | 0.814916 | 1.21E-51 | -1.69E-46 |
| MS.gene053006 | MS.gene67007 | 0.800739 | 1.25E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene67007 | 0.854879 | 9.17E-62 | -1.69E-46 |
| MS.gene053079 | MS.gene67007 | 0.821231 | 4.51E-53 | -1.69E-46 |
| MS.gene053166 | MS.gene67007 | 0.817434 | 3.30E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene67007 | 0.819802 | 9.59E-53 | -1.69E-46 |
| MS.gene05350 | MS.gene67007 | 0.8166 | 5.09E-52 | -1.69E-46 |
| MS.gene053621 | MS.gene67007 | 0.811249 | 7.69E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene67007 | 0.822689 | 2.07E-53 | -1.69E-46 |
| MS.gene053931 | MS.gene67007 | 0.837089 | 6.38E-57 | -1.69E-46 |
| MS.gene05415 | MS.gene67007 | 0.814268 | 1.68E-51 | -1.69E-46 |
| MS.gene054236 | MS.gene67007 | 0.83669 | 8.07E-57 | -1.69E-46 |
| MS.gene054479 | MS.gene67007 | 0.824699 | 7.01E-54 | -1.69E-46 |
| MS.gene05458 | MS.gene67007 | 0.816086 | 6.63E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene67007 | 0.867194 | 1.64E-65 | -1.69E-46 |
| MS.gene054657 | MS.gene67007 | 0.803264 | 3.79E-49 | -1.69E-46 |
| MS.gene054775 | MS.gene67007 | 0.808321 | 3.28E-50 | -1.69E-46 |
| MS.gene054994 | MS.gene67007 | 0.833547 | 5.01E-56 | -1.69E-46 |
| MS.gene05510 | MS.gene67007 | 0.817872 | 2.63E-52 | -1.69E-46 |
| MS.gene05517 | MS.gene67007 | 0.831961 | 1.24E-55 | -1.69E-46 |
| MS.gene055222 | MS.gene67007 | 0.826036 | 3.38E-54 | -1.69E-46 |
| MS.gene055227 | MS.gene67007 | 0.817768 | 2.78E-52 | -1.69E-46 |
| MS.gene055228 | MS.gene67007 | 0.816147 | 6.42E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene67007 | 0.813675 | 2.27E-51 | -1.69E-46 |
| MS.gene055623 | MS.gene67007 | 0.822583 | 2.19E-53 | -1.69E-46 |
| MS.gene055818 | MS.gene67007 | 0.838491 | 2.79E-57 | -1.69E-46 |
| MS.gene055841 | MS.gene67007 | 0.819489 | 1.13E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene67007 | 0.845682 | 3.49E-59 | -1.69E-46 |
| MS.gene056045 | MS.gene67007 | 0.812224 | 4.72E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene67007 | 0.835745 | 1.40E-56 | -1.69E-46 |
| MS.gene056181 | MS.gene67007 | 0.800045 | 1.73E-48 | -1.69E-46 |
| MS.gene056252 | MS.gene67007 | 0.803717 | 3.05E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene67007 | 0.8244 | 8.24E-54 | -1.69E-46 |
| MS.gene056595 | MS.gene67007 | 0.816814 | 4.55E-52 | -1.69E-46 |
| MS.gene056699 | MS.gene67007 | 0.809235 | 2.09E-50 | -1.69E-46 |
| MS.gene056776 | MS.gene67007 | 0.821133 | 4.75E-53 | -1.69E-46 |
| MS.gene056834 | MS.gene67007 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene05686 | MS.gene67007 | 0.843346 | 1.48E-58 | -1.69E-46 |
| MS.gene05690 | MS.gene67007 | 0.843735 | 1.17E-58 | -1.69E-46 |
| MS.gene057034 | MS.gene67007 | 0.823748 | 1.17E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene67007 | 0.855664 | 5.42E-62 | -1.69E-46 |
| MS.gene057444 | MS.gene67007 | 0.806179 | 9.33E-50 | -1.69E-46 |
| MS.gene057598 | MS.gene67007 | 0.812428 | 4.26E-51 | -1.69E-46 |
| MS.gene057601 | MS.gene67007 | 0.808868 | 2.51E-50 | -1.69E-46 |
| MS.gene057693 | MS.gene67007 | 0.834496 | 2.90E-56 | -1.69E-46 |
| MS.gene057855 | MS.gene67007 | 0.842958 | 1.88E-58 | -1.69E-46 |
| MS.gene057869 | MS.gene67007 | 0.83702 | 6.65E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene67007 | 0.819468 | 1.14E-52 | -1.69E-46 |
| MS.gene058008 | MS.gene67007 | 0.820967 | 5.18E-53 | -1.69E-46 |
| MS.gene058009 | MS.gene67007 | 0.852934 | 3.33E-61 | -1.69E-46 |
| MS.gene058010 | MS.gene67007 | 0.87001 | 2.02E-66 | -1.69E-46 |
| MS.gene058081 | MS.gene67007 | 0.80951 | 1.83E-50 | -1.69E-46 |
| MS.gene058126 | MS.gene67007 | 0.804551 | 2.05E-49 | -1.69E-46 |
| MS.gene058292 | MS.gene67007 | 0.80906 | 2.28E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene67007 | 0.81525 | 1.02E-51 | -1.69E-46 |
| MS.gene05847 | MS.gene67007 | 0.804332 | 2.27E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene67007 | 0.827479 | 1.53E-54 | -1.69E-46 |
| MS.gene058595 | MS.gene67007 | 0.824376 | 8.35E-54 | -1.69E-46 |
| MS.gene058625 | MS.gene67007 | 0.813103 | 3.03E-51 | -1.69E-46 |
| MS.gene058781 | MS.gene67007 | 0.864398 | 1.25E-64 | -1.69E-46 |
| MS.gene058783 | MS.gene67007 | 0.891927 | 2.54E-74 | -1.69E-46 |
| MS.gene058979 | MS.gene67007 | 0.84932 | 3.49E-60 | -1.69E-46 |
| MS.gene05897 | MS.gene67007 | 0.802492 | 5.47E-49 | -1.69E-46 |
| MS.gene059283 | MS.gene67007 | 0.822437 | 2.37E-53 | -1.69E-46 |
| MS.gene05978 | MS.gene67007 | 0.803236 | 3.84E-49 | -1.69E-46 |
| MS.gene05979 | MS.gene67007 | 0.808766 | 2.64E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene67007 | 0.857568 | 1.49E-62 | -1.69E-46 |
| MS.gene060011 | MS.gene67007 | 0.840722 | 7.33E-58 | -1.69E-46 |
| MS.gene060259 | MS.gene67007 | 0.804047 | 2.61E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene67007 | 0.839005 | 2.05E-57 | -1.69E-46 |
| MS.gene060322 | MS.gene67007 | 0.833247 | 5.95E-56 | -1.69E-46 |
| MS.gene060435 | MS.gene67007 | 0.803118 | 4.06E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene67007 | 0.843541 | 1.31E-58 | -1.69E-46 |
| MS.gene060777 | MS.gene67007 | 0.806544 | 7.81E-50 | -1.69E-46 |
| MS.gene060802 | MS.gene67007 | 0.810512 | 1.11E-50 | -1.69E-46 |
| MS.gene060803 | MS.gene67007 | 0.830972 | 2.17E-55 | -1.69E-46 |
| MS.gene060932 | MS.gene67007 | 0.832734 | 7.98E-56 | -1.69E-46 |
| MS.gene060933 | MS.gene67007 | 0.801477 | 8.84E-49 | -1.69E-46 |
| MS.gene060935 | MS.gene67007 | 0.862363 | 5.34E-64 | -1.69E-46 |
| MS.gene060937 | MS.gene67007 | 0.847453 | 1.15E-59 | -1.69E-46 |
| MS.gene060998 | MS.gene67007 | 0.808597 | 2.86E-50 | -1.69E-46 |
| MS.gene06121 | MS.gene67007 | 0.800336 | 1.51E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67007.t1 | MTR_1g018790 | 87.224 | 407 | 14 | 2 | 1 | 369 | 84 | 490 | 0.0 | 696 |
| MS.gene67007.t1 | MTR_4g094932 | 51.338 | 411 | 157 | 4 | 1 | 369 | 66 | 475 | 6.99e-138 | 403 |
| MS.gene67007.t1 | MTR_2g021030 | 23.936 | 376 | 200 | 7 | 2 | 334 | 33 | 365 | 3.95e-17 | 82.8 |
| MS.gene67007.t1 | MTR_2g021030 | 24.202 | 376 | 199 | 8 | 2 | 334 | 33 | 365 | 4.25e-17 | 83.2 |
| MS.gene67007.t1 | MTR_1g114610 | 25.600 | 375 | 180 | 14 | 3 | 332 | 43 | 363 | 4.52e-16 | 79.3 |
| MS.gene67007.t1 | MTR_3g107280 | 32.847 | 137 | 90 | 2 | 198 | 332 | 146 | 282 | 2.54e-12 | 68.6 |
| MS.gene67007.t1 | MTR_4g080020 | 25.000 | 396 | 235 | 14 | 2 | 349 | 35 | 416 | 2.41e-11 | 65.9 |
| MS.gene67007.t1 | MTR_1g012520 | 36.190 | 105 | 65 | 2 | 230 | 332 | 180 | 284 | 5.85e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67007.t1 | AT1G47056 | 61.125 | 409 | 117 | 6 | 1 | 369 | 63 | 469 | 1.37e-165 | 473 |
| MS.gene67007.t1 | AT4G07400 | 58.231 | 407 | 129 | 4 | 1 | 369 | 97 | 500 | 1.35e-156 | 452 |
| MS.gene67007.t1 | AT5G67250 | 57.033 | 391 | 129 | 4 | 1 | 353 | 66 | 455 | 7.84e-135 | 395 |
| MS.gene67007.t1 | AT3G50080 | 51.613 | 403 | 150 | 7 | 1 | 365 | 64 | 459 | 2.72e-124 | 368 |
| MS.gene67007.t1 | AT4G15475 | 27.273 | 308 | 194 | 12 | 44 | 332 | 274 | 570 | 2.82e-17 | 84.0 |
| MS.gene67007.t1 | AT4G15475 | 23.855 | 415 | 228 | 10 | 1 | 332 | 32 | 441 | 6.47e-17 | 82.8 |
| MS.gene67007.t1 | AT5G23340 | 24.857 | 350 | 213 | 12 | 3 | 332 | 33 | 352 | 7.73e-13 | 69.7 |
Find 0 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TGTTTGAAGGAACTTTATAA+TGG | + | 8721:11221-11240 | MS.gene67007:CDS | 25.0% |
| CAGAAAGATGTAAGTTGTTA+AGG | + | 8721:11493-11512 | MS.gene67007:intron | 30.0% | |
| TCAAATCGATTAAACAGAGA+AGG | - | 8721:10859-10878 | MS.gene67007:intergenic | 30.0% | |
| TTAAACAGAGAAGGAATTAC+CGG | - | 8721:10850-10869 | MS.gene67007:intergenic | 30.0% | |
| ! | AGCTTTTGCTAAGAATTGTA+AGG | + | 8721:11023-11042 | MS.gene67007:CDS | 30.0% |
| ! | GCTTTTGCTAAGAATTGTAA+GGG | + | 8721:11024-11043 | MS.gene67007:CDS | 30.0% |
| ! | TCTTGTACTTTTGGATCTAA+AGG | + | 8721:11069-11088 | MS.gene67007:intron | 30.0% |
| !!! | CTTTATAATGGACAGTGTTT+TGG | + | 8721:11233-11252 | MS.gene67007:CDS | 30.0% |
| !!! | TGTTTTGGTTCGTTGATTTT+AGG | + | 8721:11248-11267 | MS.gene67007:CDS | 30.0% |
| AAAGCCAATCTCTCTAGATT+CGG | - | 8721:11665-11684 | None:intergenic | 35.0% | |
| ACCTTCACTTTCACCAAATT+GGG | - | 8721:11818-11837 | MS.gene67007:intergenic | 35.0% | |
| AGCACCAATTCTTGCAAATT+AGG | - | 8721:11590-11609 | MS.gene67007:intergenic | 35.0% | |
| AGGCTTCAGATTAGTGATAT+TGG | + | 8721:11383-11402 | MS.gene67007:CDS | 35.0% | |
| CTAAGAATTGTAAGGGTTTG+AGG | + | 8721:11031-11050 | MS.gene67007:CDS | 35.0% | |
| GCACCAATTCTTGCAAATTA+GGG | - | 8721:11589-11608 | MS.gene67007:intergenic | 35.0% | |
| GTTAAGGAAGCTACATATGA+TGG | + | 8721:11509-11528 | MS.gene67007:CDS | 35.0% | |
| ! | GTTGAAGACGATTTGTTTGA+AGG | + | 8721:11208-11227 | MS.gene67007:CDS | 35.0% |
| ! | TTGAAGCTATTTCGATGTTC+CGG | + | 8721:11290-11309 | MS.gene67007:CDS | 35.0% |
| ! | TTGCAAGAATTGGTGCTTAT+TGG | + | 8721:11593-11612 | MS.gene67007:CDS | 35.0% |
| ! | TTGCCCTAATTTGCAAGAAT+TGG | + | 8721:11583-11602 | MS.gene67007:CDS | 35.0% |
| ! | TTGTTGAGGTTCATTTTGAG+AGG | + | 8721:11363-11382 | MS.gene67007:CDS | 35.0% |
| AAGCCAATCTCTCTAGATTC+GGG | - | 8721:11664-11683 | None:intergenic | 40.0% | |
| AAGTCCCATATCAGTACACT+CGG | - | 8721:11463-11482 | None:intergenic | 40.0% | |
| ATTTCCAAACTCACTCTCGT+AGG | - | 8721:11626-11645 | MS.gene67007:intergenic | 40.0% | |
| ATTTCGATGTTCCGGTGATT+GGG | + | 8721:11298-11317 | MS.gene67007:CDS | 40.0% | |
| GACCTTCACTTTCACCAAAT+TGG | - | 8721:11819-11838 | MS.gene67007:intergenic | 40.0% | |
| GAGAGTGAGTTTGGAAATGT+TGG | + | 8721:11628-11647 | MS.gene67007:CDS | 40.0% | |
| GGTTTGAGGAAATTATCGTG+TGG | + | 8721:11045-11064 | MS.gene67007:intron | 40.0% | |
| TATTTCGATGTTCCGGTGAT+TGG | + | 8721:11297-11316 | MS.gene67007:CDS | 40.0% | |
| TTGTGTGCAAGTGATACTGT+TGG | + | 8721:11683-11702 | MS.gene67007:CDS | 40.0% | |
| TTTCCAAACTCACTCTCGTA+GGG | - | 8721:11625-11644 | MS.gene67007:intergenic | 40.0% | |
| ! | AAAAAGCGTATCCCAATCAC+CGG | - | 8721:11312-11331 | MS.gene67007:intergenic | 40.0% |
| ! | AGGAAGCTACATATGATGGA+TGG | + | 8721:11513-11532 | MS.gene67007:CDS | 40.0% |
| ! | AGTGAAGGTCAAGAAGTGTA+AGG | + | 8721:11829-11848 | MS.gene67007:CDS | 40.0% |
| ! | GTGAAGGTCAAGAAGTGTAA+GGG | + | 8721:11830-11849 | MS.gene67007:CDS | 40.0% |
| ! | TCCCAATTTGGTGAAAGTGA+AGG | + | 8721:11814-11833 | MS.gene67007:CDS | 40.0% |
| ! | TCGTGTGGATCTTGTACTTT+TGG | + | 8721:11060-11079 | MS.gene67007:intron | 40.0% |
| ! | TTGCATTGCTGCAAAGTGTT+TGG | + | 8721:11721-11740 | MS.gene67007:CDS | 40.0% |
| ! | TTGGATCTAAAGGTATGACG+CGG | + | 8721:11079-11098 | MS.gene67007:intron | 40.0% |
| !! | AGCTACATATGATGGATGGA+AGG | + | 8721:11517-11536 | MS.gene67007:CDS | 40.0% |
| !! | AGTTGTCCTGTTTCTGATCT+TGG | + | 8721:11767-11786 | MS.gene67007:CDS | 40.0% |
| !! | ATGATGGATGGAAGGCAAAT+CGG | + | 8721:11525-11544 | MS.gene67007:CDS | 40.0% |
| !! | GGATACGCTTTTTACGCTTA+TGG | + | 8721:11319-11338 | MS.gene67007:CDS | 40.0% |
| !! | GTTGTCCTGTTTCTGATCTT+GGG | + | 8721:11768-11787 | MS.gene67007:CDS | 40.0% |
| AGTCCCATATCAGTACACTC+GGG | - | 8721:11462-11481 | MS.gene67007:intergenic | 45.0% | |
| AGTGGCGAGTATGATTGTTG+AGG | + | 8721:11349-11368 | MS.gene67007:CDS | 45.0% | |
| CAAGATGCTAGTGCTAGTGA+TGG | + | 8721:11935-11954 | MS.gene67007:CDS | 45.0% | |
| CGCGAAGTTTGATCTTCTTC+CGG | + | 8721:10828-10847 | MS.gene67007:CDS | 45.0% | |
| GCAGCAATGCAAGATATCTC+AGG | - | 8721:11713-11732 | MS.gene67007:intergenic | 45.0% | |
| GGTTTCTGTAGCTGTGAATC+TGG | + | 8721:11892-11911 | MS.gene67007:CDS | 45.0% | |
| TAACCCTACGAGAGTGAGTT+TGG | + | 8721:11619-11638 | MS.gene67007:CDS | 45.0% | |
| TACGCTTATGGCTGAAAGAG+TGG | + | 8721:11331-11350 | MS.gene67007:CDS | 45.0% | |
| TCCATCCCAAGATCAGAAAC+AGG | - | 8721:11776-11795 | MS.gene67007:intergenic | 45.0% | |
| TGATCTTGGGATGGAAGCTT+TGG | + | 8721:11781-11800 | MS.gene67007:CDS | 45.0% | |
| TGGCGATGAAGGGTTAATTG+CGG | + | 8721:11550-11569 | MS.gene67007:CDS | 45.0% | |
| TTGAAGGACAGAGTCGTCAA+CGG | + | 8721:10794-10813 | MS.gene67007:CDS | 45.0% | |
| TTGCCCGAATCTAGAGAGAT+TGG | + | 8721:11658-11677 | MS.gene67007:CDS | 45.0% | |
| ! | ACACCCGAGTGTACTGATAT+GGG | + | 8721:11456-11475 | MS.gene67007:intron | 45.0% |
| ! | GGATGGAAGCTTTGGCAAAT+GGG | + | 8721:11789-11808 | MS.gene67007:CDS | 45.0% |
| !! | CAAATCGGATTGGCGATGAA+GGG | + | 8721:11540-11559 | MS.gene67007:CDS | 45.0% |
| !! | TCCTGTTTCTGATCTTGGGA+TGG | + | 8721:11772-11791 | MS.gene67007:CDS | 45.0% |
| !! | TGTAAGGGTGTTACACCTGA+AGG | + | 8721:11845-11864 | MS.gene67007:CDS | 45.0% |
| AATCGTCTTCAACGACGCAG+CGG | - | 8721:11201-11220 | None:intergenic | 50.0% | |
| AATTGTCGGTGAAGCGGCTT+AGG | + | 8721:11129-11148 | MS.gene67007:CDS | 50.0% | |
| AGCTTAAGGCGCGTGAGATT+AGG | - | 8721:10967-10986 | MS.gene67007:intergenic | 50.0% | |
| ATTGTCGGTGAAGCGGCTTA+GGG | + | 8721:11130-11149 | MS.gene67007:CDS | 50.0% | |
| GATGCTAGTGCTAGTGATGG+TGG | + | 8721:11938-11957 | MS.gene67007:CDS | 50.0% | |
| GGATGGAAGGCAAATCGGAT+TGG | + | 8721:11530-11549 | MS.gene67007:CDS | 50.0% | |
| GGCAAATGGGTGTCCCAATT+TGG | + | 8721:11802-11821 | MS.gene67007:CDS | 50.0% | |
| TAGGGGAATTGCTGAGACTG+CGG | + | 8721:11148-11167 | MS.gene67007:CDS | 50.0% | |
| TCGAGGAATTGTCGGTGAAG+CGG | + | 8721:11123-11142 | MS.gene67007:CDS | 50.0% | |
| TGTAGCTGTGAATCTGGACG+CGG | + | 8721:11898-11917 | MS.gene67007:CDS | 50.0% | |
| TTACACCTGAAGGTGGGGAT+TGG | + | 8721:11855-11874 | MS.gene67007:CDS | 50.0% | |
| ! | AGGGTGTTACACCTGAAGGT+GGG | + | 8721:11849-11868 | MS.gene67007:CDS | 50.0% |
| ! | GACACCCGAGTGTACTGATA+TGG | + | 8721:11455-11474 | MS.gene67007:intron | 50.0% |
| ! | GGGATGGAAGCTTTGGCAAA+TGG | + | 8721:11788-11807 | MS.gene67007:CDS | 50.0% |
| !! | AAGGGTGTTACACCTGAAGG+TGG | + | 8721:11848-11867 | MS.gene67007:CDS | 50.0% |
| !! | GATGGTGGAGCACAAGAGAA+TGG | + | 8721:11953-11972 | MS.gene67007:CDS | 50.0% |
| !! | GCAAATCGGATTGGCGATGA+AGG | + | 8721:11539-11558 | MS.gene67007:CDS | 50.0% |
| !! | GGATTGGTTGAGGCACACTA+GGG | + | 8721:11871-11890 | MS.gene67007:CDS | 50.0% |
| CGAACGTACGGATGCTGGAA+TGG | + | 8721:10999-11018 | MS.gene67007:CDS | 55.0% | |
| CTCAACCAATCCCCACCTTC+AGG | - | 8721:11863-11882 | MS.gene67007:intergenic | 55.0% | |
| TGAAAATTGCGCTGCGCTCG+AGG | + | 8721:11106-11125 | MS.gene67007:CDS | 55.0% | |
| TTGTCGGTGAAGCGGCTTAG+GGG | + | 8721:11131-11150 | MS.gene67007:CDS | 55.0% | |
| ! | GGGTGTTACACCTGAAGGTG+GGG | + | 8721:11850-11869 | MS.gene67007:CDS | 55.0% |
| !! | CTGAAGGTGGGGATTGGTTG+AGG | + | 8721:11861-11880 | MS.gene67007:CDS | 55.0% |
| !! | GGGATTGGTTGAGGCACACT+AGG | + | 8721:11870-11889 | MS.gene67007:CDS | 55.0% |
| CGCCGGCAAACGAGTGAACA+CGG | - | 8721:10763-10782 | MS.gene67007:intergenic | 60.0% | |
| CGCTGCGCTCGAGGAATTGT+CGG | + | 8721:11115-11134 | MS.gene67007:CDS | 60.0% | |
| CTTCAACGTGAAGCCACCGC+CGG | - | 8721:10780-10799 | MS.gene67007:intergenic | 60.0% | |
| GGGAATTGCTGAGACTGCGG+TGG | + | 8721:11151-11170 | MS.gene67007:CDS | 60.0% | |
| TGTCGCGAACGTACGGATGC+TGG | + | 8721:10994-11013 | MS.gene67007:CDS | 60.0% | |
| ACTGCGGTGGCTGAGCCGAT+TGG | + | 8721:11164-11183 | MS.gene67007:CDS | 65.0% | |
| CGGCGGTGGCTTCACGTTGA+AGG | + | 8721:10778-10797 | MS.gene67007:CDS | 65.0% | |
| GGTGGCTGAGCCGATTGGAC+CGG | + | 8721:11169-11188 | MS.gene67007:CDS | 65.0% | |
| GTGGCTGAGCCGATTGGACC+GGG | + | 8721:11170-11189 | MS.gene67007:CDS | 65.0% | |
| GTTCACTCGTTTGCCGGCGG+TGG | + | 8721:10764-10783 | MS.gene67007:CDS | 65.0% | |
| TGAGCCGATTGGACCGGGTG+TGG | + | 8721:11175-11194 | MS.gene67007:CDS | 65.0% | |
| AACGACGCAGCGGCCACACC+CGG | - | 8721:11191-11210 | None:intergenic | 70.0% | |
| CCGCGCGTGTCGCGAACGTA+CGG | + | 8721:10987-11006 | MS.gene67007:CDS | 70.0% | |
| CCGTACGTTCGCGACACGCG+CGG | - | 8721:10990-11009 | MS.gene67007:intergenic | 70.0% | |
| CGCGACACGCGCGGAGCTTA+AGG | - | 8721:10981-11000 | MS.gene67007:intergenic | 70.0% | |
| GCGGCCACACCCGGTCCAAT+CGG | - | 8721:11182-11201 | MS.gene67007:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8721 | gene | 10763 | 11996 | 10763 | ID=MS.gene67007 |
| 8721 | mRNA | 10763 | 11996 | 10763 | ID=MS.gene67007.t1;Parent=MS.gene67007 |
| 8721 | exon | 10763 | 11061 | 10763 | ID=MS.gene67007.t1.exon1;Parent=MS.gene67007.t1 |
| 8721 | CDS | 10763 | 11061 | 10763 | ID=cds.MS.gene67007.t1;Parent=MS.gene67007.t1 |
| 8721 | exon | 11091 | 11425 | 11091 | ID=MS.gene67007.t1.exon2;Parent=MS.gene67007.t1 |
| 8721 | CDS | 11091 | 11425 | 11091 | ID=cds.MS.gene67007.t1;Parent=MS.gene67007.t1 |
| 8721 | exon | 11507 | 11996 | 11507 | ID=MS.gene67007.t1.exon3;Parent=MS.gene67007.t1 |
| 8721 | CDS | 11507 | 11996 | 11507 | ID=cds.MS.gene67007.t1;Parent=MS.gene67007.t1 |
| Gene Sequence |
| Protein sequence |
