Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068526.t1 | XP_013468327.1 | 92.2 | 880 | 69 | 0 | 1 | 880 | 1 | 880 | 0.00E+00 | 1234.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068526.t1 | Q9C895 | 44.1 | 903 | 479 | 4 | 1 | 880 | 1 | 900 | 8.2e-168 | 592.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068526.t1 | A0A072VK57 | 92.2 | 880 | 69 | 0 | 1 | 880 | 1 | 880 | 0.0e+00 | 1234.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene068526 | 0.822844 | 1.91E-53 | -1.69E-46 |
MS.gene049159 | MS.gene068526 | 0.854849 | 9.36E-62 | -1.69E-46 |
MS.gene049254 | MS.gene068526 | 0.864204 | 1.44E-64 | -1.69E-46 |
MS.gene049343 | MS.gene068526 | 0.842501 | 2.49E-58 | -1.69E-46 |
MS.gene049404 | MS.gene068526 | 0.836444 | 9.32E-57 | -1.69E-46 |
MS.gene049435 | MS.gene068526 | 0.83965 | 1.40E-57 | -1.69E-46 |
MS.gene049452 | MS.gene068526 | 0.841445 | 4.73E-58 | -1.69E-46 |
MS.gene049501 | MS.gene068526 | 0.805875 | 1.08E-49 | -1.69E-46 |
MS.gene049850 | MS.gene068526 | 0.815684 | 8.15E-52 | -1.69E-46 |
MS.gene049983 | MS.gene068526 | 0.837144 | 6.18E-57 | -1.69E-46 |
MS.gene050026 | MS.gene068526 | 0.832294 | 1.03E-55 | -1.69E-46 |
MS.gene050073 | MS.gene068526 | 0.811705 | 6.12E-51 | -1.69E-46 |
MS.gene050119 | MS.gene068526 | 0.832118 | 1.13E-55 | -1.69E-46 |
MS.gene050156 | MS.gene068526 | 0.814838 | 1.26E-51 | -1.69E-46 |
MS.gene050355 | MS.gene068526 | 0.814703 | 1.35E-51 | -1.69E-46 |
MS.gene050442 | MS.gene068526 | 0.834131 | 3.58E-56 | -1.69E-46 |
MS.gene050559 | MS.gene068526 | 0.831922 | 1.27E-55 | -1.69E-46 |
MS.gene050561 | MS.gene068526 | 0.834209 | 3.42E-56 | -1.69E-46 |
MS.gene050562 | MS.gene068526 | 0.817289 | 3.56E-52 | -1.69E-46 |
MS.gene050605 | MS.gene068526 | 0.83233 | 1.01E-55 | -1.69E-46 |
MS.gene050680 | MS.gene068526 | 0.8176 | 3.03E-52 | -1.69E-46 |
MS.gene050719 | MS.gene068526 | 0.817017 | 4.10E-52 | -1.69E-46 |
MS.gene050721 | MS.gene068526 | 0.816093 | 6.61E-52 | -1.69E-46 |
MS.gene050724 | MS.gene068526 | 0.807477 | 4.96E-50 | -1.69E-46 |
MS.gene050750 | MS.gene068526 | 0.815376 | 9.54E-52 | -1.69E-46 |
MS.gene050759 | MS.gene068526 | 0.822212 | 2.67E-53 | -1.69E-46 |
MS.gene050780 | MS.gene068526 | 0.810712 | 1.01E-50 | -1.69E-46 |
MS.gene050844 | MS.gene068526 | 0.834155 | 3.53E-56 | -1.69E-46 |
MS.gene050953 | MS.gene068526 | 0.824548 | 7.61E-54 | -1.69E-46 |
MS.gene050962 | MS.gene068526 | 0.807781 | 4.27E-50 | -1.69E-46 |
MS.gene051181 | MS.gene068526 | 0.843984 | 1.00E-58 | -1.69E-46 |
MS.gene051198 | MS.gene068526 | 0.840585 | 7.96E-58 | -1.69E-46 |
MS.gene051279 | MS.gene068526 | 0.821397 | 4.13E-53 | -1.69E-46 |
MS.gene051332 | MS.gene068526 | 0.801582 | 8.41E-49 | -1.69E-46 |
MS.gene051368 | MS.gene068526 | 0.829587 | 4.74E-55 | -1.69E-46 |
MS.gene051543 | MS.gene068526 | 0.804451 | 2.15E-49 | -1.69E-46 |
MS.gene051744 | MS.gene068526 | 0.863438 | 2.49E-64 | -1.69E-46 |
MS.gene051800 | MS.gene068526 | 0.830791 | 2.41E-55 | -1.69E-46 |
MS.gene052012 | MS.gene068526 | 0.811204 | 7.87E-51 | -1.69E-46 |
MS.gene052020 | MS.gene068526 | 0.813416 | 2.59E-51 | -1.69E-46 |
MS.gene052190 | MS.gene068526 | 0.818933 | 1.51E-52 | -1.69E-46 |
MS.gene052208 | MS.gene068526 | 0.816866 | 4.43E-52 | -1.69E-46 |
MS.gene052239 | MS.gene068526 | -0.803419 | 3.52E-49 | -1.69E-46 |
MS.gene052323 | MS.gene068526 | 0.809372 | 1.96E-50 | -1.69E-46 |
MS.gene052333 | MS.gene068526 | 0.836772 | 7.69E-57 | -1.69E-46 |
MS.gene052500 | MS.gene068526 | 0.81271 | 3.70E-51 | -1.69E-46 |
MS.gene052502 | MS.gene068526 | 0.803215 | 3.88E-49 | -1.69E-46 |
MS.gene052516 | MS.gene068526 | 0.815867 | 7.42E-52 | -1.69E-46 |
MS.gene052519 | MS.gene068526 | 0.84748 | 1.13E-59 | -1.69E-46 |
MS.gene052582 | MS.gene068526 | 0.819535 | 1.10E-52 | -1.69E-46 |
MS.gene052584 | MS.gene068526 | 0.821044 | 4.98E-53 | -1.69E-46 |
MS.gene052611 | MS.gene068526 | 0.835997 | 1.21E-56 | -1.69E-46 |
MS.gene052674 | MS.gene068526 | 0.813923 | 2.00E-51 | -1.69E-46 |
MS.gene052675 | MS.gene068526 | 0.814604 | 1.42E-51 | -1.69E-46 |
MS.gene052677 | MS.gene068526 | 0.818069 | 2.38E-52 | -1.69E-46 |
MS.gene052773 | MS.gene068526 | 0.823135 | 1.63E-53 | -1.69E-46 |
MS.gene052826 | MS.gene068526 | 0.808326 | 3.27E-50 | -1.69E-46 |
MS.gene052863 | MS.gene068526 | 0.847815 | 9.11E-60 | -1.69E-46 |
MS.gene052867 | MS.gene068526 | 0.816707 | 4.81E-52 | -1.69E-46 |
MS.gene052896 | MS.gene068526 | 0.806246 | 9.03E-50 | -1.69E-46 |
MS.gene052954 | MS.gene068526 | 0.823472 | 1.36E-53 | -1.69E-46 |
MS.gene053006 | MS.gene068526 | 0.821776 | 3.37E-53 | -1.69E-46 |
MS.gene053008 | MS.gene068526 | 0.847723 | 9.66E-60 | -1.69E-46 |
MS.gene053079 | MS.gene068526 | 0.822585 | 2.19E-53 | -1.69E-46 |
MS.gene053166 | MS.gene068526 | 0.840708 | 7.39E-58 | -1.69E-46 |
MS.gene053201 | MS.gene068526 | 0.82007 | 8.33E-53 | -1.69E-46 |
MS.gene053202 | MS.gene068526 | 0.815222 | 1.03E-51 | -1.69E-46 |
MS.gene053226 | MS.gene068526 | 0.861271 | 1.15E-63 | -1.69E-46 |
MS.gene053296 | MS.gene068526 | 0.819745 | 9.88E-53 | -1.69E-46 |
MS.gene05364 | MS.gene068526 | 0.809129 | 2.20E-50 | -1.69E-46 |
MS.gene053931 | MS.gene068526 | 0.809 | 2.35E-50 | -1.69E-46 |
MS.gene053966 | MS.gene068526 | 0.8065 | 7.98E-50 | -1.69E-46 |
MS.gene053998 | MS.gene068526 | 0.842044 | 3.29E-58 | -1.69E-46 |
MS.gene05414 | MS.gene068526 | 0.812215 | 4.74E-51 | -1.69E-46 |
MS.gene05415 | MS.gene068526 | 0.848696 | 5.20E-60 | -1.69E-46 |
MS.gene054236 | MS.gene068526 | 0.843073 | 1.75E-58 | -1.69E-46 |
MS.gene05423 | MS.gene068526 | 0.808258 | 3.38E-50 | -1.69E-46 |
MS.gene054405 | MS.gene068526 | 0.818524 | 1.87E-52 | -1.69E-46 |
MS.gene054467 | MS.gene068526 | 0.804985 | 1.66E-49 | -1.69E-46 |
MS.gene054472 | MS.gene068526 | 0.802962 | 4.37E-49 | -1.69E-46 |
MS.gene054479 | MS.gene068526 | 0.837019 | 6.65E-57 | -1.69E-46 |
MS.gene054559 | MS.gene068526 | 0.834466 | 2.95E-56 | -1.69E-46 |
MS.gene054576 | MS.gene068526 | 0.809055 | 2.29E-50 | -1.69E-46 |
MS.gene054582 | MS.gene068526 | 0.802614 | 5.16E-49 | -1.69E-46 |
MS.gene054651 | MS.gene068526 | 0.851059 | 1.14E-60 | -1.69E-46 |
MS.gene054657 | MS.gene068526 | 0.823341 | 1.46E-53 | -1.69E-46 |
MS.gene054658 | MS.gene068526 | 0.821296 | 4.35E-53 | -1.69E-46 |
MS.gene054775 | MS.gene068526 | 0.837094 | 6.37E-57 | -1.69E-46 |
MS.gene054943 | MS.gene068526 | 0.802309 | 5.96E-49 | -1.69E-46 |
MS.gene054994 | MS.gene068526 | 0.841629 | 4.23E-58 | -1.69E-46 |
MS.gene05510 | MS.gene068526 | 0.808976 | 2.38E-50 | -1.69E-46 |
MS.gene055166 | MS.gene068526 | 0.82299 | 1.76E-53 | -1.69E-46 |
MS.gene055222 | MS.gene068526 | 0.816196 | 6.26E-52 | -1.69E-46 |
MS.gene055227 | MS.gene068526 | 0.851737 | 7.30E-61 | -1.69E-46 |
MS.gene055228 | MS.gene068526 | 0.832003 | 1.21E-55 | -1.69E-46 |
MS.gene055230 | MS.gene068526 | 0.802403 | 5.70E-49 | -1.69E-46 |
MS.gene055464 | MS.gene068526 | 0.807678 | 4.49E-50 | -1.69E-46 |
MS.gene055512 | MS.gene068526 | 0.812416 | 4.29E-51 | -1.69E-46 |
MS.gene055586 | MS.gene068526 | 0.823284 | 1.50E-53 | -1.69E-46 |
MS.gene055589 | MS.gene068526 | 0.806149 | 9.46E-50 | -1.69E-46 |
MS.gene055623 | MS.gene068526 | 0.813786 | 2.15E-51 | -1.69E-46 |
MS.gene055701 | MS.gene068526 | 0.826486 | 2.64E-54 | -1.69E-46 |
MS.gene055778 | MS.gene068526 | 0.800948 | 1.13E-48 | -1.69E-46 |
MS.gene055818 | MS.gene068526 | 0.860656 | 1.77E-63 | -1.69E-46 |
MS.gene055841 | MS.gene068526 | 0.810813 | 9.57E-51 | -1.69E-46 |
MS.gene055926 | MS.gene068526 | 0.822755 | 2.00E-53 | -1.69E-46 |
MS.gene05604 | MS.gene068526 | 0.814503 | 1.49E-51 | -1.69E-46 |
MS.gene056050 | MS.gene068526 | 0.839306 | 1.71E-57 | -1.69E-46 |
MS.gene056162 | MS.gene068526 | 0.845211 | 4.68E-59 | -1.69E-46 |
MS.gene056173 | MS.gene068526 | 0.837732 | 4.37E-57 | -1.69E-46 |
MS.gene056174 | MS.gene068526 | 0.843055 | 1.77E-58 | -1.69E-46 |
MS.gene056252 | MS.gene068526 | 0.816946 | 4.25E-52 | -1.69E-46 |
MS.gene056366 | MS.gene068526 | 0.830214 | 3.33E-55 | -1.69E-46 |
MS.gene056506 | MS.gene068526 | 0.837307 | 5.61E-57 | -1.69E-46 |
MS.gene056595 | MS.gene068526 | 0.804148 | 2.48E-49 | -1.69E-46 |
MS.gene05659 | MS.gene068526 | 0.814381 | 1.59E-51 | -1.69E-46 |
MS.gene056776 | MS.gene068526 | 0.800427 | 1.45E-48 | -1.69E-46 |
MS.gene05686 | MS.gene068526 | 0.85217 | 5.50E-61 | -1.69E-46 |
MS.gene05690 | MS.gene068526 | 0.813684 | 2.26E-51 | -1.69E-46 |
MS.gene057026 | MS.gene068526 | 0.832681 | 8.23E-56 | -1.69E-46 |
MS.gene057060 | MS.gene068526 | 0.807407 | 5.13E-50 | -1.69E-46 |
MS.gene057208 | MS.gene068526 | 0.861075 | 1.32E-63 | -1.69E-46 |
MS.gene057444 | MS.gene068526 | 0.837828 | 4.13E-57 | -1.69E-46 |
MS.gene057598 | MS.gene068526 | 0.858487 | 7.96E-63 | -1.69E-46 |
MS.gene057601 | MS.gene068526 | 0.805819 | 1.11E-49 | -1.69E-46 |
MS.gene057693 | MS.gene068526 | 0.829817 | 4.16E-55 | -1.69E-46 |
MS.gene057855 | MS.gene068526 | 0.888198 | 7.30E-73 | -1.69E-46 |
MS.gene057869 | MS.gene068526 | 0.84065 | 7.65E-58 | -1.69E-46 |
MS.gene057915 | MS.gene068526 | 0.836451 | 9.29E-57 | -1.69E-46 |
MS.gene058008 | MS.gene068526 | 0.823181 | 1.59E-53 | -1.69E-46 |
MS.gene058009 | MS.gene068526 | 0.857938 | 1.16E-62 | -1.69E-46 |
MS.gene058010 | MS.gene068526 | 0.868165 | 7.99E-66 | -1.69E-46 |
MS.gene058037 | MS.gene068526 | 0.810539 | 1.10E-50 | -1.69E-46 |
MS.gene058146 | MS.gene068526 | 0.812665 | 3.78E-51 | -1.69E-46 |
MS.gene058427 | MS.gene068526 | 0.814054 | 1.87E-51 | -1.69E-46 |
MS.gene058548 | MS.gene068526 | 0.824986 | 6.00E-54 | -1.69E-46 |
MS.gene058595 | MS.gene068526 | 0.826889 | 2.12E-54 | -1.69E-46 |
MS.gene058625 | MS.gene068526 | 0.839311 | 1.71E-57 | -1.69E-46 |
MS.gene058636 | MS.gene068526 | 0.80046 | 1.43E-48 | -1.69E-46 |
MS.gene05868 | MS.gene068526 | 0.810877 | 9.26E-51 | -1.69E-46 |
MS.gene058781 | MS.gene068526 | 0.82586 | 3.72E-54 | -1.69E-46 |
MS.gene058783 | MS.gene068526 | 0.8454 | 4.16E-59 | -1.69E-46 |
MS.gene058829 | MS.gene068526 | 0.821304 | 4.33E-53 | -1.69E-46 |
MS.gene058979 | MS.gene068526 | 0.968379 | 1.36E-128 | -1.69E-46 |
MS.gene05897 | MS.gene068526 | 0.806495 | 8.00E-50 | -1.69E-46 |
MS.gene059272 | MS.gene068526 | 0.805305 | 1.42E-49 | -1.69E-46 |
MS.gene059283 | MS.gene068526 | 0.818871 | 1.56E-52 | -1.69E-46 |
MS.gene059306 | MS.gene068526 | 0.820703 | 5.96E-53 | -1.69E-46 |
MS.gene059382 | MS.gene068526 | 0.815048 | 1.13E-51 | -1.69E-46 |
MS.gene059439 | MS.gene068526 | 0.800861 | 1.18E-48 | -1.69E-46 |
MS.gene059550 | MS.gene068526 | 0.814622 | 1.40E-51 | -1.69E-46 |
MS.gene059570 | MS.gene068526 | 0.821182 | 4.62E-53 | -1.69E-46 |
MS.gene059625 | MS.gene068526 | 0.816166 | 6.36E-52 | -1.69E-46 |
MS.gene059789 | MS.gene068526 | 0.805566 | 1.25E-49 | -1.69E-46 |
MS.gene05979 | MS.gene068526 | 0.813997 | 1.93E-51 | -1.69E-46 |
MS.gene059842 | MS.gene068526 | 0.832852 | 7.46E-56 | -1.69E-46 |
MS.gene060011 | MS.gene068526 | 0.851847 | 6.80E-61 | -1.69E-46 |
MS.gene060167 | MS.gene068526 | 0.808926 | 2.44E-50 | -1.69E-46 |
MS.gene060310 | MS.gene068526 | 0.83466 | 2.64E-56 | -1.69E-46 |
MS.gene060322 | MS.gene068526 | 0.846223 | 2.49E-59 | -1.69E-46 |
MS.gene060521 | MS.gene068526 | 0.80605 | 9.93E-50 | -1.69E-46 |
MS.gene06052 | MS.gene068526 | 0.842645 | 2.28E-58 | -1.69E-46 |
MS.gene060572 | MS.gene068526 | 0.810362 | 1.20E-50 | -1.69E-46 |
MS.gene060683 | MS.gene068526 | 0.813918 | 2.01E-51 | -1.69E-46 |
MS.gene060685 | MS.gene068526 | 0.819779 | 9.71E-53 | -1.69E-46 |
MS.gene060803 | MS.gene068526 | 0.805176 | 1.51E-49 | -1.69E-46 |
MS.gene060935 | MS.gene068526 | 0.851766 | 7.17E-61 | -1.69E-46 |
MS.gene060937 | MS.gene068526 | 0.837733 | 4.37E-57 | -1.69E-46 |
MS.gene060998 | MS.gene068526 | 0.817318 | 3.51E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068526.t1 | MTR_1g068830 | 97.045 | 880 | 26 | 0 | 1 | 880 | 1 | 880 | 0.0 | 1733 |
MS.gene068526.t1 | MTR_5g085010 | 87.841 | 880 | 107 | 0 | 1 | 880 | 1 | 880 | 0.0 | 1502 |
MS.gene068526.t1 | MTR_7g046250 | 31.719 | 867 | 580 | 6 | 18 | 880 | 19 | 877 | 3.63e-127 | 404 |
MS.gene068526.t1 | MTR_7g046250 | 32.993 | 685 | 448 | 5 | 18 | 699 | 19 | 695 | 1.98e-98 | 323 |
MS.gene068526.t1 | MTR_5g065520 | 50.347 | 288 | 47 | 3 | 275 | 551 | 1 | 203 | 4.46e-68 | 233 |
MS.gene068526.t1 | MTR_3g060950 | 76.429 | 140 | 17 | 2 | 724 | 861 | 73 | 198 | 8.44e-59 | 200 |
MS.gene068526.t1 | MTR_8g064230 | 82.143 | 84 | 15 | 0 | 252 | 335 | 2 | 85 | 4.62e-38 | 137 |
MS.gene068526.t1 | MTR_5g065540 | 70.175 | 57 | 15 | 1 | 39 | 93 | 2 | 58 | 1.96e-18 | 80.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068526.t1 | AT1G55250 | 55.215 | 882 | 392 | 3 | 1 | 880 | 1 | 881 | 0.0 | 932 |
MS.gene068526.t1 | AT1G55250 | 54.111 | 900 | 392 | 6 | 1 | 880 | 1 | 899 | 0.0 | 913 |
MS.gene068526.t1 | AT1G55250 | 53.710 | 903 | 392 | 5 | 1 | 880 | 1 | 900 | 0.0 | 909 |
MS.gene068526.t1 | AT1G55250 | 58.158 | 380 | 158 | 1 | 502 | 880 | 4 | 383 | 9.61e-144 | 431 |
MS.gene068526.t1 | AT1G55250 | 56.091 | 394 | 158 | 2 | 502 | 880 | 4 | 397 | 1.31e-139 | 421 |
MS.gene068526.t1 | AT2G44950 | 30.926 | 886 | 586 | 11 | 8 | 880 | 6 | 878 | 1.47e-117 | 379 |
MS.gene068526.t1 | AT2G44950 | 30.015 | 673 | 448 | 9 | 8 | 669 | 6 | 666 | 2.85e-74 | 257 |
Find 163 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCCTCAATAGAATCTTTC+TGG | 0.156125 | 1.1:+50261358 | None:intergenic |
CTTCCACATCTTTCTGAATT+TGG | 0.157200 | 1.1:+50252833 | None:intergenic |
CAGAATTCAGCTCAGCAATT+TGG | 0.228587 | 1.1:+50251834 | None:intergenic |
GAAGGAGTTGAAGTTGAAAT+TGG | 0.231877 | 1.1:-50257915 | MS.gene068526:CDS |
TCAACATTGGATTGCTGAAT+TGG | 0.236912 | 1.1:-50258089 | MS.gene068526:CDS |
CAAATGTGCTGAACAGGTTT+TGG | 0.250460 | 1.1:-50256297 | MS.gene068526:CDS |
GCTGAACAAGCTGCTGATTC+TGG | 0.251145 | 1.1:+50261845 | None:intergenic |
ATTGACAAACCTGAAGTTCT+TGG | 0.253258 | 1.1:+50258276 | None:intergenic |
TTTCTAGTTGGTTGATGATA+TGG | 0.255629 | 1.1:-50261633 | MS.gene068526:intron |
CTTTGCGTCGGTTATCTACT+AGG | 0.292056 | 1.1:-50261293 | MS.gene068526:CDS |
GGAGAATGGTTGGTTGAATT+TGG | 0.292304 | 1.1:+50262726 | None:intergenic |
GTTACAGATTGAAAAGTTAC+AGG | 0.298097 | 1.1:-50255917 | MS.gene068526:intron |
TCTGACATTAAACGCCTTAC+AGG | 0.299793 | 1.1:-50260867 | MS.gene068526:intron |
CAAAGATTCTTTGGAAACTT+TGG | 0.300310 | 1.1:-50261582 | MS.gene068526:CDS |
GATTGATGATATGACGAAAA+AGG | 0.308345 | 1.1:-50260991 | MS.gene068526:CDS |
CTTTCAGATTCTCTAACTTC+TGG | 0.330016 | 1.1:+50255063 | None:intergenic |
GCCCTGTCTGCAGGCTTCTC+AGG | 0.332687 | 1.1:+50258498 | None:intergenic |
AACGCAGAAACACGCTTTAC+AGG | 0.334237 | 1.1:-50261815 | MS.gene068526:CDS |
TCGGGAGTTAGAATTTGTTT+TGG | 0.337092 | 1.1:-50255887 | MS.gene068526:CDS |
TGGGAGAGGCAAAGATTCTT+TGG | 0.337753 | 1.1:-50261591 | MS.gene068526:CDS |
TATCATCAATCTTAGACATT+TGG | 0.341485 | 1.1:+50261003 | None:intergenic |
TTCAGCTTTATCTAAAGAAA+TGG | 0.347729 | 1.1:-50257637 | MS.gene068526:CDS |
AAGCTGAACTAGAGGAGTTA+AGG | 0.349863 | 1.1:-50254921 | MS.gene068526:CDS |
TTCCCACCTGGCAAACTCTA+AGG | 0.353582 | 1.1:+50252924 | None:intergenic |
AGAGTTTGCCAGGTGGGAAT+TGG | 0.354577 | 1.1:-50252920 | MS.gene068526:CDS |
TCAGCTTTATCTAAAGAAAT+GGG | 0.360839 | 1.1:-50257636 | MS.gene068526:CDS |
AAAGAAATTCCAAGAACTTC+AGG | 0.368208 | 1.1:-50258285 | MS.gene068526:intron |
GTTGATGATATGGCTCTTCT+CGG | 0.369040 | 1.1:-50261623 | MS.gene068526:CDS |
TGCAAACAAATGTGCTGAAC+AGG | 0.371578 | 1.1:-50256303 | MS.gene068526:CDS |
TCAATGTTCCTGTAGACTAT+TGG | 0.374103 | 1.1:-50254007 | MS.gene068526:intron |
AGATGAGGCTTCTTGTTGTT+GGG | 0.375831 | 1.1:+50262777 | None:intergenic |
TTCCCTTCCTTCGTGTCATC+CGG | 0.390660 | 1.1:-50261406 | MS.gene068526:CDS |
TCCTAGAGTCAGAATTGTTA+TGG | 0.391813 | 1.1:+50257867 | None:intergenic |
CAAATGATCAACTTCAACAT+TGG | 0.395091 | 1.1:-50258102 | MS.gene068526:CDS |
AAACCCATGGCCCTGTCTGC+AGG | 0.401224 | 1.1:+50258489 | None:intergenic |
GCTCTTCTCGGGGTACAAGC+TGG | 0.401727 | 1.1:-50261611 | MS.gene068526:CDS |
CCTGCCTGTGGAACAGCATT+TGG | 0.404398 | 1.1:-50250737 | MS.gene068526:CDS |
AACCTCGATTTCAGATATAT+AGG | 0.404698 | 1.1:+50254122 | None:intergenic |
TACGATGGAAGAGGCCAAAC+AGG | 0.408232 | 1.1:-50257786 | MS.gene068526:CDS |
AGCTGAACTAGAGGAGTTAA+GGG | 0.411687 | 1.1:-50254920 | MS.gene068526:CDS |
CAATTCCCGAGTATACTCTT+TGG | 0.412514 | 1.1:-50258125 | MS.gene068526:CDS |
ATCCAGAAAGATTCTATTGA+GGG | 0.419466 | 1.1:-50261360 | MS.gene068526:CDS |
ATTTAGCGGCTTCTGATAGA+AGG | 0.423094 | 1.1:+50252977 | None:intergenic |
TTGATGATATGGCTCTTCTC+GGG | 0.429244 | 1.1:-50261622 | MS.gene068526:CDS |
AAGATGAGGCTTCTTGTTGT+TGG | 0.429347 | 1.1:+50262776 | None:intergenic |
GGTGAAACGCGGGAAGAAAC+AGG | 0.432248 | 1.1:+50262747 | None:intergenic |
TCAAGATTTCTTTGTATACA+TGG | 0.438637 | 1.1:+50250779 | None:intergenic |
CAGCCGCCTTAGAGTTTGCC+AGG | 0.439108 | 1.1:-50252930 | MS.gene068526:CDS |
AAAAGTTACAGGAGGAGAAT+CGG | 0.444664 | 1.1:-50255906 | MS.gene068526:CDS |
TCCAATGCTGATTCAGTGAA+TGG | 0.450902 | 1.1:-50258531 | MS.gene068526:CDS |
GGAAGCTTGTGAAAAGGAAT+TGG | 0.451020 | 1.1:-50252815 | MS.gene068526:CDS |
TTCATCTTGAGTACATTTAG+CGG | 0.459767 | 1.1:+50252963 | None:intergenic |
AATGCAAAAGGATGCAGCTA+TGG | 0.467843 | 1.1:-50258565 | MS.gene068526:CDS |
TGCTCCGTCCAGGCTGATGC+AGG | 0.468473 | 1.1:-50261880 | MS.gene068526:intron |
TCCTGAGAAGCCTGCAGACA+GGG | 0.471244 | 1.1:-50258499 | MS.gene068526:CDS |
ATCTAAAGAAATGGGGATGA+TGG | 0.472663 | 1.1:-50257628 | MS.gene068526:CDS |
CTCTTCTCGGGGTACAAGCT+GGG | 0.477873 | 1.1:-50261610 | MS.gene068526:CDS |
ACGCAGACCAGTATCCTGTT+TGG | 0.480102 | 1.1:+50257772 | None:intergenic |
CAGGGTTAACGTCTCAAAAC+GGG | 0.481009 | 1.1:-50257939 | MS.gene068526:CDS |
TCCATTCACTGAATCAGCAT+TGG | 0.484524 | 1.1:+50258530 | None:intergenic |
GAAGAGGCCAAACAGGATAC+TGG | 0.487514 | 1.1:-50257779 | MS.gene068526:intron |
CCCAGTTTGATGAAAATGAA+AGG | 0.491792 | 1.1:-50254897 | MS.gene068526:intron |
CATTTGCCAAAGAGTATACT+CGG | 0.492660 | 1.1:+50258119 | None:intergenic |
CTACATAGAAGTAGATCATC+CGG | 0.493035 | 1.1:+50261387 | None:intergenic |
GCCTAGAAGATTATCAGAAA+AGG | 0.494202 | 1.1:-50255855 | MS.gene068526:intron |
AAGAATTGAGGATATAGGTC+AGG | 0.494365 | 1.1:-50261226 | MS.gene068526:CDS |
CGCCTTAGAGTTTGCCAGGT+GGG | 0.494648 | 1.1:-50252926 | MS.gene068526:CDS |
TTATGTCATGCAGGAGTTCA+CGG | 0.495128 | 1.1:-50251892 | MS.gene068526:intron |
TTCCACAGGCAGGACATTTG+CGG | 0.497983 | 1.1:+50250747 | None:intergenic |
AAACATTTCAAATACCTGTA+AGG | 0.500187 | 1.1:+50260853 | None:intergenic |
AAAGTTACAGGAGGAGAATC+GGG | 0.500243 | 1.1:-50255905 | MS.gene068526:CDS |
ATGGAAAGAATTGAGGATAT+AGG | 0.501506 | 1.1:-50261231 | MS.gene068526:CDS |
AGGCAGGACATTTGCGGTGA+CGG | 0.501630 | 1.1:+50250753 | None:intergenic |
AATCCAGAAAGATTCTATTG+AGG | 0.504272 | 1.1:-50261361 | MS.gene068526:CDS |
GCAGGGTTAACGTCTCAAAA+CGG | 0.509035 | 1.1:-50257940 | MS.gene068526:CDS |
TGAGGCTATTAAAGTTAAAG+AGG | 0.509176 | 1.1:-50254157 | MS.gene068526:CDS |
CTCCTGAGAAGCCTGCAGAC+AGG | 0.509679 | 1.1:-50258500 | MS.gene068526:CDS |
AATCACTTCACGAAAATTGT+CGG | 0.513242 | 1.1:+50260965 | None:intergenic |
TTCTGAGCTCCAAGATGCAC+GGG | 0.513678 | 1.1:-50258327 | MS.gene068526:CDS |
CTGTCCAAATGCTGTTCCAC+AGG | 0.513830 | 1.1:+50250733 | None:intergenic |
ATTCACTGAATCAGCATTGG+AGG | 0.514943 | 1.1:+50258533 | None:intergenic |
CCAAATGCTGTTCCACAGGC+AGG | 0.515641 | 1.1:+50250737 | None:intergenic |
GTTCAGCACATTTGTTTGCA+AGG | 0.516708 | 1.1:+50256306 | None:intergenic |
ATTGGACAGATATAAATCAT+TGG | 0.516869 | 1.1:-50258071 | MS.gene068526:CDS |
AGATGTGGAAGCTTGTGAAA+AGG | 0.521111 | 1.1:-50252821 | MS.gene068526:CDS |
CAAAGCCGAGTTTCGTGTGA+TGG | 0.522522 | 1.1:-50257661 | MS.gene068526:CDS |
CTGTTGAAGTTGATCAGCTA+AGG | 0.522647 | 1.1:+50253171 | None:intergenic |
CATATGTATTATACCTTCTG+TGG | 0.523609 | 1.1:+50261185 | None:intergenic |
AAAAGGAATTGGACAGTGAA+AGG | 0.524187 | 1.1:-50252804 | MS.gene068526:intron |
CTCAATTGAATGCTTCAACT+CGG | 0.529213 | 1.1:+50258464 | None:intergenic |
CACGGAGATTTATCCACAGA+AGG | 0.529280 | 1.1:-50261198 | MS.gene068526:intron |
AGTCAGTCTGAAAATGCAAA+AGG | 0.532068 | 1.1:-50258577 | MS.gene068526:CDS |
AATGAAGTCTACAAAAGCAT+TGG | 0.533686 | 1.1:-50256273 | MS.gene068526:intron |
TTTGCGTCGGTTATCTACTA+GGG | 0.536181 | 1.1:-50261292 | MS.gene068526:CDS |
AATCAACCAACACTGGGATC+AGG | 0.540393 | 1.1:-50261728 | MS.gene068526:intron |
TAATTGCAATCAACCAACAC+TGG | 0.541368 | 1.1:-50261735 | MS.gene068526:CDS |
TTTGCTGTTAGGAGAATGGT+TGG | 0.546271 | 1.1:+50262716 | None:intergenic |
AATGGGGATGATGGACGAGC+AGG | 0.546445 | 1.1:-50257619 | MS.gene068526:CDS |
GCATTCAATTGAGGAAGCCA+AGG | 0.546475 | 1.1:-50258454 | MS.gene068526:intron |
AGGAGAGCTTGACGAGATTG+TGG | 0.546788 | 1.1:-50258628 | MS.gene068526:CDS |
ATGCAAAAGGATGCAGCTAT+GGG | 0.546927 | 1.1:-50258564 | MS.gene068526:CDS |
TGAAGCCATCACACGAAACT+CGG | 0.548398 | 1.1:+50257656 | None:intergenic |
TAGATAACCGACGCAAAGCA+AGG | 0.550352 | 1.1:+50261298 | None:intergenic |
ATCATTGGCAGAGTCTCTGC+AGG | 0.554470 | 1.1:-50258056 | MS.gene068526:intron |
GAAACAGGAGTGAGAAGATG+AGG | 0.556873 | 1.1:+50262762 | None:intergenic |
AAGCCTGCAGACAGGGCCAT+GGG | 0.559995 | 1.1:-50258492 | MS.gene068526:CDS |
CCAACATCTGTTGCAGCAAG+TGG | 0.560620 | 1.1:-50253954 | MS.gene068526:CDS |
GAAGCCTGCAGACAGGGCCA+TGG | 0.560728 | 1.1:-50258493 | MS.gene068526:CDS |
CTCGGGGTACAAGCTGGGAG+AGG | 0.560766 | 1.1:-50261605 | MS.gene068526:CDS |
AGGAAGCCCTTGCTTTGCGT+CGG | 0.560789 | 1.1:-50261305 | MS.gene068526:CDS |
CGAGTTGAAGCATTCAATTG+AGG | 0.561024 | 1.1:-50258463 | MS.gene068526:CDS |
TGATCAGATGGAAAGAATTG+AGG | 0.561074 | 1.1:-50261238 | MS.gene068526:CDS |
TATTAAAGTTAAAGAGGCTG+AGG | 0.563348 | 1.1:-50254151 | MS.gene068526:CDS |
GAGGGATGACTATAATATCA+AGG | 0.565391 | 1.1:-50253927 | MS.gene068526:intron |
TGGACGAGCAGGTGAAGCGA+TGG | 0.565581 | 1.1:-50257608 | MS.gene068526:CDS |
TCCATAACAATTCTGACTCT+AGG | 0.568748 | 1.1:-50257868 | MS.gene068526:CDS |
CATCCGGATGACACGAAGGA+AGG | 0.572324 | 1.1:+50261403 | None:intergenic |
CTGAAGCTGCTTGTGAACAA+AGG | 0.572664 | 1.1:-50254957 | MS.gene068526:CDS |
TAACGTCTCAAAACGGGAGA+AGG | 0.575407 | 1.1:-50257933 | MS.gene068526:CDS |
GGAATTGGCTGATGCTGAGA+AGG | 0.575750 | 1.1:-50252905 | MS.gene068526:CDS |
TGAGATTACTAATTATGTTG+AGG | 0.578428 | 1.1:-50261325 | MS.gene068526:CDS |
CCACTTGCTGCAACAGATGT+TGG | 0.580687 | 1.1:+50253954 | None:intergenic |
TCTTGAAATTACGATGGAAG+AGG | 0.580999 | 1.1:-50257795 | MS.gene068526:CDS |
TTTCTGAGCTCCAAGATGCA+CGG | 0.582913 | 1.1:-50258328 | MS.gene068526:CDS |
AGATACCGTTGATGATCAGA+TGG | 0.584592 | 1.1:-50261250 | MS.gene068526:CDS |
TCACTAAGAGCAACATTGAG+TGG | 0.584786 | 1.1:-50257540 | MS.gene068526:CDS |
GAATAACCTGATCCCAGTGT+TGG | 0.585715 | 1.1:+50261722 | None:intergenic |
AACCTATATATCTGAAATCG+AGG | 0.589196 | 1.1:-50254124 | MS.gene068526:intron |
AGCATCAGCCAATTCCCACC+TGG | 0.596588 | 1.1:+50252912 | None:intergenic |
ATCCGGATGACACGAAGGAA+GGG | 0.598223 | 1.1:+50261404 | None:intergenic |
CAGCTTTATCTAAAGAAATG+GGG | 0.599897 | 1.1:-50257635 | MS.gene068526:CDS |
TCTTTCCATCTGATCATCAA+CGG | 0.601325 | 1.1:+50261245 | None:intergenic |
CGACCAAATTCAGAAAGATG+TGG | 0.602428 | 1.1:-50252836 | MS.gene068526:CDS |
ATTGCTGAGCTGAATTCTGA+AGG | 0.603898 | 1.1:-50251830 | MS.gene068526:CDS |
AGATAACCGACGCAAAGCAA+GGG | 0.606298 | 1.1:+50261299 | None:intergenic |
CACCGCAAATGTCCTGCCTG+TGG | 0.609399 | 1.1:-50250749 | MS.gene068526:CDS |
AAACACAAGGAGTATACTGT+TGG | 0.609461 | 1.1:-50260927 | MS.gene068526:CDS |
CTGTTCTGACCGTCCAAAGG+AGG | 0.610575 | 1.1:-50251738 | MS.gene068526:intron |
CAGAAGTTAGAGAATCTGAA+AGG | 0.612893 | 1.1:-50255062 | MS.gene068526:CDS |
TCTTGTTGTTGGGTTCGTCG+TGG | 0.614659 | 1.1:+50262787 | None:intergenic |
AAGAGCAACATTGAGTGGAA+AGG | 0.617926 | 1.1:-50257535 | MS.gene068526:intron |
TGATGATATGGCTCTTCTCG+GGG | 0.619933 | 1.1:-50261621 | MS.gene068526:CDS |
GTTGCAGCAAGTGGCTGAGA+GGG | 0.621288 | 1.1:-50253945 | MS.gene068526:CDS |
TGGAGTCTGCTGTTAATGCA+AGG | 0.625436 | 1.1:-50257895 | MS.gene068526:CDS |
TGTCTGTTCTGACCGTCCAA+AGG | 0.626715 | 1.1:-50251741 | MS.gene068526:CDS |
TGCTGCAGAAGCTGAACTAG+AGG | 0.629556 | 1.1:-50254929 | MS.gene068526:CDS |
AATTGCAATCAACCAACACT+GGG | 0.631357 | 1.1:-50261734 | MS.gene068526:CDS |
GAGTTCACGGAAGAAGCTTG+AGG | 0.633563 | 1.1:-50251879 | MS.gene068526:CDS |
AAGTACCTTGTGGATTATCG+AGG | 0.633911 | 1.1:+50261555 | None:intergenic |
TGTTGCAGCAAGTGGCTGAG+AGG | 0.640275 | 1.1:-50253946 | MS.gene068526:CDS |
CTTCAACTCGGACAAACCCA+TGG | 0.641274 | 1.1:+50258476 | None:intergenic |
GAATGATCTTGAAATTACGA+TGG | 0.643737 | 1.1:-50257801 | MS.gene068526:CDS |
GGTTGAATTTGGTGAAACGC+GGG | 0.644185 | 1.1:+50262737 | None:intergenic |
ACAGATTGAAAAGTTACAGG+AGG | 0.653733 | 1.1:-50255914 | MS.gene068526:intron |
AGATCATCCGGATGACACGA+AGG | 0.657010 | 1.1:+50261399 | None:intergenic |
TACTCTCCATGCAAAACACA+AGG | 0.662712 | 1.1:-50260940 | MS.gene068526:CDS |
GCTTGTATCAGAAAGCGTGA+AGG | 0.670954 | 1.1:-50253233 | MS.gene068526:CDS |
ATTTGCCAAAGAGTATACTC+GGG | 0.676867 | 1.1:+50258120 | None:intergenic |
CAAACTCTAAGGCGGCTGCG+AGG | 0.683577 | 1.1:+50252935 | None:intergenic |
CCGCCTTAGAGTTTGCCAGG+TGG | 0.688256 | 1.1:-50252927 | MS.gene068526:CDS |
TGGTTGAATTTGGTGAAACG+CGG | 0.705123 | 1.1:+50262736 | None:intergenic |
CCACCTGGCAAACTCTAAGG+CGG | 0.716860 | 1.1:+50252927 | None:intergenic |
GATTACCTCGATAATCCACA+AGG | 0.721386 | 1.1:-50261560 | MS.gene068526:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 50250706 | 50262823 | 50250706 | ID=MS.gene068526 |
chr1.1 | mRNA | 50250706 | 50262823 | 50250706 | ID=MS.gene068526.t1;Parent=MS.gene068526 |
chr1.1 | exon | 50262713 | 50262823 | 50262713 | ID=MS.gene068526.t1.exon1;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50262713 | 50262823 | 50262713 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50261729 | 50261890 | 50261729 | ID=MS.gene068526.t1.exon2;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50261729 | 50261890 | 50261729 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50261561 | 50261648 | 50261561 | ID=MS.gene068526.t1.exon3;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50261561 | 50261648 | 50261561 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50261199 | 50261429 | 50261199 | ID=MS.gene068526.t1.exon4;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50261199 | 50261429 | 50261199 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50260868 | 50261035 | 50260868 | ID=MS.gene068526.t1.exon5;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50260868 | 50261035 | 50260868 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50258455 | 50258648 | 50258455 | ID=MS.gene068526.t1.exon6;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50258455 | 50258648 | 50258455 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50258286 | 50258369 | 50258286 | ID=MS.gene068526.t1.exon7;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50258286 | 50258369 | 50258286 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50258057 | 50258176 | 50258057 | ID=MS.gene068526.t1.exon8;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50258057 | 50258176 | 50258057 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50257780 | 50257966 | 50257780 | ID=MS.gene068526.t1.exon9;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50257780 | 50257966 | 50257780 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50257536 | 50257696 | 50257536 | ID=MS.gene068526.t1.exon10;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50257536 | 50257696 | 50257536 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50256274 | 50256345 | 50256274 | ID=MS.gene068526.t1.exon11;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50256274 | 50256345 | 50256274 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50255856 | 50255932 | 50255856 | ID=MS.gene068526.t1.exon12;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50255856 | 50255932 | 50255856 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50254898 | 50255089 | 50254898 | ID=MS.gene068526.t1.exon13;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50254898 | 50255089 | 50254898 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50254125 | 50254197 | 50254125 | ID=MS.gene068526.t1.exon14;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50254125 | 50254197 | 50254125 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50253928 | 50254014 | 50253928 | ID=MS.gene068526.t1.exon15;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50253928 | 50254014 | 50253928 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50253117 | 50253254 | 50253117 | ID=MS.gene068526.t1.exon16;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50253117 | 50253254 | 50253117 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50252805 | 50253007 | 50252805 | ID=MS.gene068526.t1.exon17;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50252805 | 50253007 | 50252805 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50251739 | 50251901 | 50251739 | ID=MS.gene068526.t1.exon18;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50251739 | 50251901 | 50251739 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
chr1.1 | exon | 50250706 | 50250837 | 50250706 | ID=MS.gene068526.t1.exon19;Parent=MS.gene068526.t1 |
chr1.1 | CDS | 50250706 | 50250837 | 50250706 | ID=cds.MS.gene068526.t1;Parent=MS.gene068526.t1 |
Gene Sequence |
Protein sequence |