Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67662.t1 | XP_013463860.1 | 96.4 | 551 | 13 | 1 | 1 | 551 | 1 | 544 | 1.70E-287 | 998 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67662.t1 | P54729 | 26.6 | 403 | 266 | 9 | 60 | 451 | 142 | 525 | 3.3e-26 | 121.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67662.t1 | A0A072VIE6 | 96.4 | 551 | 13 | 1 | 1 | 551 | 1 | 544 | 1.2e-287 | 998.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene67662 | 0.837467 | 5.11E-57 | -1.69E-46 |
| MS.gene049159 | MS.gene67662 | 0.857623 | 1.44E-62 | -1.69E-46 |
| MS.gene04918 | MS.gene67662 | 0.824989 | 5.99E-54 | -1.69E-46 |
| MS.gene04920 | MS.gene67662 | 0.804951 | 1.69E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene67662 | 0.864288 | 1.35E-64 | -1.69E-46 |
| MS.gene049283 | MS.gene67662 | 0.843564 | 1.30E-58 | -1.69E-46 |
| MS.gene049343 | MS.gene67662 | 0.834325 | 3.20E-56 | -1.69E-46 |
| MS.gene049368 | MS.gene67662 | 0.822645 | 2.12E-53 | -1.69E-46 |
| MS.gene049404 | MS.gene67662 | 0.829342 | 5.43E-55 | -1.69E-46 |
| MS.gene049419 | MS.gene67662 | -0.807736 | 4.37E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene67662 | 0.806714 | 7.19E-50 | -1.69E-46 |
| MS.gene049435 | MS.gene67662 | 0.820329 | 7.27E-53 | -1.69E-46 |
| MS.gene049452 | MS.gene67662 | 0.850478 | 1.66E-60 | -1.69E-46 |
| MS.gene049499 | MS.gene67662 | 0.823275 | 1.51E-53 | -1.69E-46 |
| MS.gene049666 | MS.gene67662 | 0.806217 | 9.16E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene67662 | 0.810554 | 1.09E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene67662 | 0.872093 | 4.14E-67 | -1.69E-46 |
| MS.gene050026 | MS.gene67662 | 0.81745 | 3.28E-52 | -1.69E-46 |
| MS.gene050073 | MS.gene67662 | 0.816502 | 5.35E-52 | -1.69E-46 |
| MS.gene050105 | MS.gene67662 | 0.804294 | 2.31E-49 | -1.69E-46 |
| MS.gene050355 | MS.gene67662 | 0.812151 | 4.90E-51 | -1.69E-46 |
| MS.gene050442 | MS.gene67662 | 0.812103 | 5.02E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene67662 | 0.867389 | 1.42E-65 | -1.69E-46 |
| MS.gene050561 | MS.gene67662 | 0.868242 | 7.55E-66 | -1.69E-46 |
| MS.gene050562 | MS.gene67662 | 0.858723 | 6.77E-63 | -1.69E-46 |
| MS.gene050605 | MS.gene67662 | 0.817182 | 3.77E-52 | -1.69E-46 |
| MS.gene050646 | MS.gene67662 | 0.804229 | 2.39E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene67662 | 0.822841 | 1.91E-53 | -1.69E-46 |
| MS.gene050689 | MS.gene67662 | 0.802535 | 5.36E-49 | -1.69E-46 |
| MS.gene050759 | MS.gene67662 | 0.849435 | 3.24E-60 | -1.69E-46 |
| MS.gene050844 | MS.gene67662 | 0.801018 | 1.10E-48 | -1.69E-46 |
| MS.gene050962 | MS.gene67662 | 0.838719 | 2.43E-57 | -1.69E-46 |
| MS.gene051181 | MS.gene67662 | 0.847578 | 1.06E-59 | -1.69E-46 |
| MS.gene051198 | MS.gene67662 | 0.853053 | 3.08E-61 | -1.69E-46 |
| MS.gene051247 | MS.gene67662 | 0.80204 | 6.77E-49 | -1.69E-46 |
| MS.gene051279 | MS.gene67662 | 0.842793 | 2.08E-58 | -1.69E-46 |
| MS.gene051332 | MS.gene67662 | 0.828742 | 7.59E-55 | -1.69E-46 |
| MS.gene051343 | MS.gene67662 | 0.807039 | 6.14E-50 | -1.69E-46 |
| MS.gene051363 | MS.gene67662 | 0.810425 | 1.16E-50 | -1.69E-46 |
| MS.gene051368 | MS.gene67662 | 0.844215 | 8.68E-59 | -1.69E-46 |
| MS.gene051543 | MS.gene67662 | 0.810485 | 1.13E-50 | -1.69E-46 |
| MS.gene051574 | MS.gene67662 | 0.802772 | 4.79E-49 | -1.69E-46 |
| MS.gene051597 | MS.gene67662 | 0.835917 | 1.27E-56 | -1.69E-46 |
| MS.gene051744 | MS.gene67662 | 0.867704 | 1.12E-65 | -1.69E-46 |
| MS.gene051800 | MS.gene67662 | 0.831023 | 2.11E-55 | -1.69E-46 |
| MS.gene051975 | MS.gene67662 | 0.828896 | 6.97E-55 | -1.69E-46 |
| MS.gene052012 | MS.gene67662 | 0.815754 | 7.86E-52 | -1.69E-46 |
| MS.gene052037 | MS.gene67662 | 0.800711 | 1.27E-48 | -1.69E-46 |
| MS.gene052108 | MS.gene67662 | 0.808357 | 3.22E-50 | -1.69E-46 |
| MS.gene052208 | MS.gene67662 | 0.825593 | 4.31E-54 | -1.69E-46 |
| MS.gene052239 | MS.gene67662 | -0.820112 | 8.15E-53 | -1.69E-46 |
| MS.gene052333 | MS.gene67662 | 0.824377 | 8.34E-54 | -1.69E-46 |
| MS.gene052463 | MS.gene67662 | 0.807425 | 5.09E-50 | -1.69E-46 |
| MS.gene052500 | MS.gene67662 | 0.833401 | 5.45E-56 | -1.69E-46 |
| MS.gene052502 | MS.gene67662 | 0.822235 | 2.64E-53 | -1.69E-46 |
| MS.gene052516 | MS.gene67662 | 0.824574 | 7.50E-54 | -1.69E-46 |
| MS.gene052518 | MS.gene67662 | 0.804848 | 1.77E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene67662 | 0.849135 | 3.93E-60 | -1.69E-46 |
| MS.gene052582 | MS.gene67662 | 0.846272 | 2.41E-59 | -1.69E-46 |
| MS.gene052584 | MS.gene67662 | 0.851937 | 6.41E-61 | -1.69E-46 |
| MS.gene052586 | MS.gene67662 | 0.807522 | 4.85E-50 | -1.69E-46 |
| MS.gene052674 | MS.gene67662 | 0.807785 | 4.26E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene67662 | 0.80778 | 4.28E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene67662 | 0.813768 | 2.17E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene67662 | 0.834267 | 3.31E-56 | -1.69E-46 |
| MS.gene052826 | MS.gene67662 | 0.828011 | 1.14E-54 | -1.69E-46 |
| MS.gene052863 | MS.gene67662 | 0.824321 | 8.60E-54 | -1.69E-46 |
| MS.gene052867 | MS.gene67662 | 0.801581 | 8.42E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene67662 | 0.843846 | 1.09E-58 | -1.69E-46 |
| MS.gene053006 | MS.gene67662 | 0.858242 | 9.42E-63 | -1.69E-46 |
| MS.gene053008 | MS.gene67662 | 0.827378 | 1.62E-54 | -1.69E-46 |
| MS.gene053079 | MS.gene67662 | 0.841248 | 5.33E-58 | -1.69E-46 |
| MS.gene05308 | MS.gene67662 | 0.830321 | 3.14E-55 | -1.69E-46 |
| MS.gene053166 | MS.gene67662 | 0.818659 | 1.75E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene67662 | 0.872644 | 2.71E-67 | -1.69E-46 |
| MS.gene053272 | MS.gene67662 | -0.828719 | 7.69E-55 | -1.69E-46 |
| MS.gene05350 | MS.gene67662 | 0.803419 | 3.52E-49 | -1.69E-46 |
| MS.gene053541 | MS.gene67662 | 0.801736 | 7.82E-49 | -1.69E-46 |
| MS.gene053542 | MS.gene67662 | 0.815192 | 1.05E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene67662 | 0.800397 | 1.47E-48 | -1.69E-46 |
| MS.gene05364 | MS.gene67662 | 0.834054 | 3.74E-56 | -1.69E-46 |
| MS.gene053931 | MS.gene67662 | 0.86468 | 1.02E-64 | -1.69E-46 |
| MS.gene053963 | MS.gene67662 | 0.81705 | 4.03E-52 | -1.69E-46 |
| MS.gene053995 | MS.gene67662 | 0.804498 | 2.10E-49 | -1.69E-46 |
| MS.gene053998 | MS.gene67662 | 0.811364 | 7.27E-51 | -1.69E-46 |
| MS.gene05414 | MS.gene67662 | 0.819278 | 1.26E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene67662 | 0.847039 | 1.49E-59 | -1.69E-46 |
| MS.gene054236 | MS.gene67662 | 0.817759 | 2.79E-52 | -1.69E-46 |
| MS.gene054479 | MS.gene67662 | 0.845756 | 3.33E-59 | -1.69E-46 |
| MS.gene054576 | MS.gene67662 | 0.822161 | 2.75E-53 | -1.69E-46 |
| MS.gene05458 | MS.gene67662 | 0.816949 | 4.25E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene67662 | 0.889917 | 1.58E-73 | -1.69E-46 |
| MS.gene054657 | MS.gene67662 | 0.83567 | 1.47E-56 | -1.69E-46 |
| MS.gene054658 | MS.gene67662 | 0.816354 | 5.77E-52 | -1.69E-46 |
| MS.gene054775 | MS.gene67662 | 0.828305 | 9.68E-55 | -1.69E-46 |
| MS.gene054892 | MS.gene67662 | 0.827313 | 1.68E-54 | -1.69E-46 |
| MS.gene054893 | MS.gene67662 | 0.831859 | 1.31E-55 | -1.69E-46 |
| MS.gene054994 | MS.gene67662 | 0.840569 | 8.04E-58 | -1.69E-46 |
| MS.gene05510 | MS.gene67662 | 0.808054 | 3.74E-50 | -1.69E-46 |
| MS.gene055166 | MS.gene67662 | 0.807286 | 5.45E-50 | -1.69E-46 |
| MS.gene05517 | MS.gene67662 | 0.831767 | 1.38E-55 | -1.69E-46 |
| MS.gene055222 | MS.gene67662 | 0.849889 | 2.42E-60 | -1.69E-46 |
| MS.gene055227 | MS.gene67662 | 0.810608 | 1.06E-50 | -1.69E-46 |
| MS.gene055228 | MS.gene67662 | 0.81591 | 7.25E-52 | -1.69E-46 |
| MS.gene055464 | MS.gene67662 | 0.811675 | 6.22E-51 | -1.69E-46 |
| MS.gene055512 | MS.gene67662 | 0.802088 | 6.62E-49 | -1.69E-46 |
| MS.gene055513 | MS.gene67662 | 0.801128 | 1.04E-48 | -1.69E-46 |
| MS.gene055586 | MS.gene67662 | 0.85937 | 4.33E-63 | -1.69E-46 |
| MS.gene055589 | MS.gene67662 | 0.819994 | 8.67E-53 | -1.69E-46 |
| MS.gene055623 | MS.gene67662 | 0.831004 | 2.13E-55 | -1.69E-46 |
| MS.gene055701 | MS.gene67662 | 0.80503 | 1.63E-49 | -1.69E-46 |
| MS.gene055724 | MS.gene67662 | 0.800659 | 1.30E-48 | -1.69E-46 |
| MS.gene055778 | MS.gene67662 | 0.825497 | 4.54E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene67662 | 0.83763 | 4.64E-57 | -1.69E-46 |
| MS.gene055841 | MS.gene67662 | 0.868124 | 8.24E-66 | -1.69E-46 |
| MS.gene055926 | MS.gene67662 | 0.811563 | 6.58E-51 | -1.69E-46 |
| MS.gene056045 | MS.gene67662 | 0.805283 | 1.44E-49 | -1.69E-46 |
| MS.gene056050 | MS.gene67662 | 0.82942 | 5.20E-55 | -1.69E-46 |
| MS.gene056162 | MS.gene67662 | 0.864934 | 8.50E-65 | -1.69E-46 |
| MS.gene056174 | MS.gene67662 | 0.868474 | 6.36E-66 | -1.69E-46 |
| MS.gene056215 | MS.gene67662 | 0.807376 | 5.21E-50 | -1.69E-46 |
| MS.gene056252 | MS.gene67662 | 0.816402 | 5.63E-52 | -1.69E-46 |
| MS.gene056363 | MS.gene67662 | 0.810869 | 9.30E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene67662 | 0.824458 | 7.98E-54 | -1.69E-46 |
| MS.gene056480 | MS.gene67662 | 0.817255 | 3.63E-52 | -1.69E-46 |
| MS.gene056506 | MS.gene67662 | 0.839502 | 1.52E-57 | -1.69E-46 |
| MS.gene056595 | MS.gene67662 | 0.805039 | 1.62E-49 | -1.69E-46 |
| MS.gene05659 | MS.gene67662 | 0.809922 | 1.49E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene67662 | 0.833118 | 6.41E-56 | -1.69E-46 |
| MS.gene056776 | MS.gene67662 | 0.840949 | 6.39E-58 | -1.69E-46 |
| MS.gene056779 | MS.gene67662 | 0.805944 | 1.05E-49 | -1.69E-46 |
| MS.gene056834 | MS.gene67662 | 0.802772 | 4.79E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene67662 | 0.889415 | 2.47E-73 | -1.69E-46 |
| MS.gene056873 | MS.gene67662 | 0.800211 | 1.60E-48 | -1.69E-46 |
| MS.gene05690 | MS.gene67662 | 0.854483 | 1.19E-61 | -1.69E-46 |
| MS.gene056973 | MS.gene67662 | 0.852225 | 5.31E-61 | -1.69E-46 |
| MS.gene056986 | MS.gene67662 | 0.814784 | 1.29E-51 | -1.69E-46 |
| MS.gene057026 | MS.gene67662 | 0.802285 | 6.03E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene67662 | 0.816961 | 4.22E-52 | -1.69E-46 |
| MS.gene057060 | MS.gene67662 | 0.807155 | 5.80E-50 | -1.69E-46 |
| MS.gene057102 | MS.gene67662 | 0.824002 | 1.02E-53 | -1.69E-46 |
| MS.gene057208 | MS.gene67662 | 0.902232 | 1.20E-78 | -1.69E-46 |
| MS.gene057314 | MS.gene67662 | 0.810656 | 1.03E-50 | -1.69E-46 |
| MS.gene057392 | MS.gene67662 | 0.821951 | 3.07E-53 | -1.69E-46 |
| MS.gene057444 | MS.gene67662 | 0.824016 | 1.01E-53 | -1.69E-46 |
| MS.gene057598 | MS.gene67662 | 0.858953 | 5.78E-63 | -1.69E-46 |
| MS.gene057601 | MS.gene67662 | 0.811601 | 6.45E-51 | -1.69E-46 |
| MS.gene057611 | MS.gene67662 | 0.813431 | 2.57E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene67662 | 0.848168 | 7.28E-60 | -1.69E-46 |
| MS.gene057855 | MS.gene67662 | 0.864829 | 9.18E-65 | -1.69E-46 |
| MS.gene057869 | MS.gene67662 | 0.829497 | 4.98E-55 | -1.69E-46 |
| MS.gene057915 | MS.gene67662 | 0.838525 | 2.73E-57 | -1.69E-46 |
| MS.gene05795 | MS.gene67662 | 0.802347 | 5.86E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene67662 | 0.856092 | 4.06E-62 | -1.69E-46 |
| MS.gene058009 | MS.gene67662 | 0.877829 | 4.59E-69 | -1.69E-46 |
| MS.gene058010 | MS.gene67662 | 0.864935 | 8.50E-65 | -1.69E-46 |
| MS.gene058037 | MS.gene67662 | 0.815962 | 7.07E-52 | -1.69E-46 |
| MS.gene058081 | MS.gene67662 | 0.806293 | 8.83E-50 | -1.69E-46 |
| MS.gene058088 | MS.gene67662 | 0.814416 | 1.56E-51 | -1.69E-46 |
| MS.gene058126 | MS.gene67662 | 0.800594 | 1.34E-48 | -1.69E-46 |
| MS.gene058146 | MS.gene67662 | 0.808924 | 2.44E-50 | -1.69E-46 |
| MS.gene058223 | MS.gene67662 | -0.806438 | 8.23E-50 | -1.69E-46 |
| MS.gene058292 | MS.gene67662 | 0.826793 | 2.23E-54 | -1.69E-46 |
| MS.gene058355 | MS.gene67662 | 0.80056 | 1.36E-48 | -1.69E-46 |
| MS.gene058427 | MS.gene67662 | 0.845779 | 3.28E-59 | -1.69E-46 |
| MS.gene05847 | MS.gene67662 | 0.818341 | 2.06E-52 | -1.69E-46 |
| MS.gene058548 | MS.gene67662 | 0.834688 | 2.59E-56 | -1.69E-46 |
| MS.gene058595 | MS.gene67662 | 0.8137 | 2.24E-51 | -1.69E-46 |
| MS.gene058625 | MS.gene67662 | 0.832633 | 8.46E-56 | -1.69E-46 |
| MS.gene058781 | MS.gene67662 | 0.878878 | 1.97E-69 | -1.69E-46 |
| MS.gene058783 | MS.gene67662 | 0.896139 | 4.91E-76 | -1.69E-46 |
| MS.gene058979 | MS.gene67662 | 0.879428 | 1.26E-69 | -1.69E-46 |
| MS.gene05897 | MS.gene67662 | 0.8357 | 1.44E-56 | -1.69E-46 |
| MS.gene059272 | MS.gene67662 | 0.802868 | 4.57E-49 | -1.69E-46 |
| MS.gene059283 | MS.gene67662 | 0.825214 | 5.30E-54 | -1.69E-46 |
| MS.gene059317 | MS.gene67662 | 0.806537 | 7.84E-50 | -1.69E-46 |
| MS.gene05952 | MS.gene67662 | 0.814965 | 1.18E-51 | -1.69E-46 |
| MS.gene059550 | MS.gene67662 | 0.800712 | 1.27E-48 | -1.69E-46 |
| MS.gene059625 | MS.gene67662 | 0.811291 | 7.54E-51 | -1.69E-46 |
| MS.gene05978 | MS.gene67662 | 0.803471 | 3.43E-49 | -1.69E-46 |
| MS.gene05979 | MS.gene67662 | 0.809913 | 1.50E-50 | -1.69E-46 |
| MS.gene059842 | MS.gene67662 | 0.856408 | 3.28E-62 | -1.69E-46 |
| MS.gene05985 | MS.gene67662 | -0.844505 | 7.25E-59 | -1.69E-46 |
| MS.gene059935 | MS.gene67662 | 0.812186 | 4.81E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene67662 | 0.844405 | 7.72E-59 | -1.69E-46 |
| MS.gene060244 | MS.gene67662 | 0.809171 | 2.16E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene67662 | 0.814207 | 1.73E-51 | -1.69E-46 |
| MS.gene060310 | MS.gene67662 | 0.85052 | 1.61E-60 | -1.69E-46 |
| MS.gene060322 | MS.gene67662 | 0.82858 | 8.31E-55 | -1.69E-46 |
| MS.gene060365 | MS.gene67662 | 0.818312 | 2.09E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene67662 | 0.805648 | 1.21E-49 | -1.69E-46 |
| MS.gene060435 | MS.gene67662 | 0.820867 | 5.47E-53 | -1.69E-46 |
| MS.gene060521 | MS.gene67662 | 0.81339 | 2.62E-51 | -1.69E-46 |
| MS.gene06052 | MS.gene67662 | 0.824726 | 6.90E-54 | -1.69E-46 |
| MS.gene060777 | MS.gene67662 | 0.822036 | 2.94E-53 | -1.69E-46 |
| MS.gene060803 | MS.gene67662 | 0.809263 | 2.06E-50 | -1.69E-46 |
| MS.gene060840 | MS.gene67662 | 0.819677 | 1.02E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene67662 | 0.801205 | 1.01E-48 | -1.69E-46 |
| MS.gene060933 | MS.gene67662 | 0.836604 | 8.49E-57 | -1.69E-46 |
| MS.gene060935 | MS.gene67662 | 0.886062 | 4.74E-72 | -1.69E-46 |
| MS.gene060937 | MS.gene67662 | 0.874503 | 6.42E-68 | -1.69E-46 |
| MS.gene060998 | MS.gene67662 | 0.805732 | 1.16E-49 | -1.69E-46 |
| MS.gene061160 | MS.gene67662 | 0.800439 | 1.44E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67662.t1 | MTR_2g450730 | 96.370 | 551 | 13 | 1 | 1 | 551 | 1 | 544 | 0.0 | 1078 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67662.t1 | AT2G12550 | 56.050 | 562 | 227 | 8 | 1 | 546 | 1 | 558 | 0.0 | 632 |
Find 128 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAAATCATCTTCTTATT+TGG | 0.145142 | 2.3:+40107576 | None:intergenic |
| TGTAAATCAGAATTGGTTTC+TGG | 0.155036 | 2.3:+40108210 | None:intergenic |
| CAGATCCACGGCCTTCTTTA+AGG | 0.187611 | 2.3:+40108520 | None:intergenic |
| CTACTCACCTCAATGACTTT+TGG | 0.271684 | 2.3:+40111251 | None:intergenic |
| AGAAACCAATTCTGATTTAC+AGG | 0.272571 | 2.3:-40108208 | MS.gene67662:intron |
| TACTGTCACTTCTCCTCAAC+AGG | 0.299237 | 2.3:-40114547 | MS.gene67662:CDS |
| GGGGTGGTGGCATTTCATTC+TGG | 0.301341 | 2.3:-40109362 | MS.gene67662:CDS |
| TACCTAATTGGGTTAGGGTT+AGG | 0.307949 | 2.3:+40114595 | None:intergenic |
| TCATGCTACGGGACATTAGA+TGG | 0.315239 | 2.3:-40109668 | MS.gene67662:CDS |
| GAATTCTACCAGCACAAATA+AGG | 0.341318 | 2.3:+40114637 | None:intergenic |
| ACCCTAACCCTAACCCAATT+AGG | 0.342476 | 2.3:-40114597 | MS.gene67662:CDS |
| AAGAAGTCGATTTAGAGAAT+TGG | 0.355332 | 2.3:-40114725 | MS.gene67662:CDS |
| CTGAACGAATTGGTCACTAT+TGG | 0.357481 | 2.3:-40108491 | MS.gene67662:CDS |
| GATCTTCAACCCCATTCATT+TGG | 0.359756 | 2.3:+40107755 | None:intergenic |
| ACCTAATTGGGTTAGGGTTA+GGG | 0.372520 | 2.3:+40114596 | None:intergenic |
| CTTAAAGAAGGCCGTGGATC+TGG | 0.374229 | 2.3:-40108519 | MS.gene67662:CDS |
| AGATCCACGGCCTTCTTTAA+GGG | 0.381674 | 2.3:+40108521 | None:intergenic |
| TGTTACCTGTAAATCAGAAT+TGG | 0.383655 | 2.3:+40108203 | None:intergenic |
| ACCATGTCAATTTGCAGTAT+TGG | 0.385264 | 2.3:+40109702 | None:intergenic |
| TGCAAAAGCGAAGTTTGTTC+AGG | 0.395049 | 2.3:-40109306 | MS.gene67662:intron |
| CATAACTGAGTACCTGTCTA+TGG | 0.395210 | 2.3:-40107620 | MS.gene67662:CDS |
| CTCATAGGCTTGCTCGTATT+AGG | 0.406605 | 2.3:-40114494 | MS.gene67662:intron |
| CTTGCCTTGATTTCTCCAAC+TGG | 0.414108 | 2.3:+40109339 | None:intergenic |
| TTTGATACCTAATTGGGTTA+GGG | 0.418819 | 2.3:+40114590 | None:intergenic |
| GAATGAACAATCAAGATGTT+GGG | 0.423602 | 2.3:-40108720 | MS.gene67662:CDS |
| TTCATTAACCTTATTTGTGC+TGG | 0.424720 | 2.3:-40114645 | MS.gene67662:CDS |
| CTGCAACTGCATTGGCTGAA+AGG | 0.425202 | 2.3:-40112305 | MS.gene67662:CDS |
| TTCTTCACGTAATGAAGAAA+TGG | 0.425445 | 2.3:+40114701 | None:intergenic |
| TTCCTGCCCTAGCCATTTCA+AGG | 0.427968 | 2.3:+40109625 | None:intergenic |
| CTGTCTATGGTTGAGTCTGC+AGG | 0.429526 | 2.3:-40107607 | MS.gene67662:CDS |
| TGCTGGAAAGCGCCTTGAAA+TGG | 0.430491 | 2.3:-40109637 | MS.gene67662:CDS |
| GACATTCTAGACCAAATGAA+TGG | 0.434790 | 2.3:-40107766 | MS.gene67662:CDS |
| TGCCATTGATTTCCTTGTTG+AGG | 0.440595 | 2.3:-40108695 | MS.gene67662:CDS |
| GACATTGAAGTTAATATTGA+AGG | 0.441170 | 2.3:-40107649 | MS.gene67662:CDS |
| CCAGGGAGCAAAAGCGGTAT+GGG | 0.441248 | 2.3:-40108550 | MS.gene67662:intron |
| CGAATGAACAATCAAGATGT+TGG | 0.443559 | 2.3:-40108721 | MS.gene67662:CDS |
| GCAGCAGTTGAATTCATTTG+AGG | 0.444304 | 2.3:+40107841 | None:intergenic |
| TGAACGAATTGGTCACTATT+GGG | 0.444732 | 2.3:-40108490 | MS.gene67662:intron |
| AGTGACAGTAGCGAGAATCT+TGG | 0.449149 | 2.3:+40114560 | None:intergenic |
| ATTTGGCAGGGCAGTAATGA+TGG | 0.451862 | 2.3:-40112068 | MS.gene67662:intron |
| AGAAGAAAGGGATGTGGAGA+TGG | 0.456681 | 2.3:-40107722 | MS.gene67662:CDS |
| GGTTGCATATTCTCAGCCTC+AGG | 0.456720 | 2.3:+40107862 | None:intergenic |
| ATCACAATAAAACAGAAGAA+AGG | 0.465013 | 2.3:-40107735 | MS.gene67662:CDS |
| CATAGACAGGTACTCAGTTA+TGG | 0.465982 | 2.3:+40107621 | None:intergenic |
| GGCATTTCATTCTGGCCAGT+TGG | 0.467585 | 2.3:-40109354 | MS.gene67662:CDS |
| TTGAGACTAGAGCTGCTTGA+AGG | 0.470120 | 2.3:-40109383 | MS.gene67662:CDS |
| ACATTCTAGACCAAATGAAT+GGG | 0.470306 | 2.3:-40107765 | MS.gene67662:CDS |
| ACAAGTGATAAGGCCTCATC+TGG | 0.470489 | 2.3:+40108787 | None:intergenic |
| TTGAGGAACAAAGCTCTCAT+AGG | 0.473510 | 2.3:-40114509 | MS.gene67662:CDS |
| TCCAGGGAGCAAAAGCGGTA+TGG | 0.475210 | 2.3:-40108551 | MS.gene67662:intron |
| GAAGTGAGGATTATCGCAAT+TGG | 0.482473 | 2.3:+40114665 | None:intergenic |
| GGACTGATGCTTCATGCAAA+GGG | 0.483061 | 2.3:-40112046 | MS.gene67662:CDS |
| AAGATAGCAGGAACATGGTC+AGG | 0.484618 | 2.3:-40114756 | MS.gene67662:CDS |
| TGATTTCCTTGTTGAGGAGA+AGG | 0.485527 | 2.3:-40108689 | MS.gene67662:CDS |
| TCACAATAAAACAGAAGAAA+GGG | 0.485998 | 2.3:-40107734 | MS.gene67662:CDS |
| TCTGGAGAGACTGAACGAAT+TGG | 0.486099 | 2.3:-40108501 | MS.gene67662:CDS |
| CAGGGCAGCTGCAACTGCAT+TGG | 0.489381 | 2.3:-40112313 | MS.gene67662:CDS |
| CGCCTTGAAATGGCTAGGGC+AGG | 0.494912 | 2.3:-40109627 | MS.gene67662:CDS |
| CTTATCACTTGTTATGAGCA+TGG | 0.500815 | 2.3:-40108776 | MS.gene67662:CDS |
| CATGCTCATAACAAGTGATA+AGG | 0.501636 | 2.3:+40108777 | None:intergenic |
| AGAAAGGGATGTGGAGATGG+AGG | 0.502336 | 2.3:-40107719 | MS.gene67662:CDS |
| TTCAATGTCATAATCAGTAA+AGG | 0.506090 | 2.3:+40107663 | None:intergenic |
| ATAACTCACAGTGCAACCTC+TGG | 0.506415 | 2.3:+40109543 | None:intergenic |
| GCAGGAATTGAACGTGCTCA+TGG | 0.514358 | 2.3:-40109609 | MS.gene67662:CDS |
| CTCTCTGCAGATATAGCTAA+AGG | 0.515262 | 2.3:-40107691 | MS.gene67662:CDS |
| ATTAGATGGTTATCAGATGC+TGG | 0.515816 | 2.3:-40109654 | MS.gene67662:CDS |
| ACATTGAAGTTAATATTGAA+GGG | 0.516059 | 2.3:-40107648 | MS.gene67662:CDS |
| TGAGCATGGGCTACACTCAA+AGG | 0.519721 | 2.3:-40108762 | MS.gene67662:CDS |
| CTGGCCAGTTGGAGAAATCA+AGG | 0.520361 | 2.3:-40109343 | MS.gene67662:CDS |
| TTATCACTTGTTATGAGCAT+GGG | 0.521383 | 2.3:-40108775 | MS.gene67662:CDS |
| GATCCACGGCCTTCTTTAAG+GGG | 0.523385 | 2.3:+40108522 | None:intergenic |
| CTCCTCAACAAGGAAATCAA+TGG | 0.528274 | 2.3:+40108693 | None:intergenic |
| CTTACATCGCAGGTTTGAGA+AGG | 0.534464 | 2.3:-40108301 | MS.gene67662:intron |
| TTGTGCTGGTAGAATTCTCA+AGG | 0.536220 | 2.3:-40114631 | MS.gene67662:CDS |
| TGAGACTAGAGCTGCTTGAA+GGG | 0.538710 | 2.3:-40109382 | MS.gene67662:CDS |
| AAATGATACTCAGAAGGCAT+TGG | 0.543068 | 2.3:-40108247 | MS.gene67662:CDS |
| GAGCATGGGCTACACTCAAA+GGG | 0.544631 | 2.3:-40108761 | MS.gene67662:CDS |
| TTAAGATCGAGTCAAGGAAA+AGG | 0.546564 | 2.3:-40108114 | MS.gene67662:CDS |
| AGAGCTGCTTGAAGGGGTGG+TGG | 0.548955 | 2.3:-40109375 | MS.gene67662:CDS |
| ATGGCGAAATTGAAGATAGC+AGG | 0.549751 | 2.3:-40114768 | MS.gene67662:CDS |
| GGGTCAGTCTCTTGTTGTTG+AGG | 0.549824 | 2.3:-40114526 | MS.gene67662:CDS |
| AGTGGACAGAAAGTACGCTT+AGG | 0.551971 | 2.3:-40112228 | MS.gene67662:CDS |
| TACTGCAAATTGACATGGTA+TGG | 0.553370 | 2.3:-40109698 | MS.gene67662:CDS |
| CAGGAATTGAACGTGCTCAT+GGG | 0.566377 | 2.3:-40109608 | MS.gene67662:CDS |
| TTGTGATCCAAAAGTCATTG+AGG | 0.569044 | 2.3:-40111258 | MS.gene67662:intron |
| TATGGTGCTACTTCATGCTA+CGG | 0.569586 | 2.3:-40109680 | MS.gene67662:CDS |
| TGAAGTGCTTACCATGGGAG+AGG | 0.572323 | 2.3:-40111984 | MS.gene67662:intron |
| TTTGGCAGGGCAGTAATGAT+GGG | 0.575905 | 2.3:-40112067 | MS.gene67662:intron |
| TTCATTCCAGGGAGCAAAAG+CGG | 0.576218 | 2.3:-40108556 | MS.gene67662:intron |
| TAAAACAGAAGAAAGGGATG+TGG | 0.577129 | 2.3:-40107728 | MS.gene67662:CDS |
| CTCCGCCTCAGACTCTTACA+AGG | 0.581292 | 2.3:-40109576 | MS.gene67662:CDS |
| TCTATGTTAAAGTCTTCAAG+AGG | 0.581402 | 2.3:+40112264 | None:intergenic |
| ATGGTGCTACTTCATGCTAC+GGG | 0.586062 | 2.3:-40109679 | MS.gene67662:CDS |
| CTGCAGACTCAACCATAGAC+AGG | 0.588061 | 2.3:+40107608 | None:intergenic |
| ACTAGAGCTGCTTGAAGGGG+TGG | 0.592346 | 2.3:-40109378 | MS.gene67662:CDS |
| GAAAGCGCCTTGAAATGGCT+AGG | 0.596531 | 2.3:-40109632 | MS.gene67662:CDS |
| AATTGAACGTGCTCATGGGA+AGG | 0.600472 | 2.3:-40109604 | MS.gene67662:CDS |
| GGGACTGATGCTTCATGCAA+AGG | 0.602701 | 2.3:-40112047 | MS.gene67662:CDS |
| AAAGCGCCTTGAAATGGCTA+GGG | 0.603487 | 2.3:-40109631 | MS.gene67662:CDS |
| AAATGAAAATGATACTCAGA+AGG | 0.604629 | 2.3:-40108253 | MS.gene67662:CDS |
| CAAATAAGGTTAATGAAGTG+AGG | 0.605620 | 2.3:+40114651 | None:intergenic |
| CATTGAAGTTAATATTGAAG+GGG | 0.605658 | 2.3:-40107647 | MS.gene67662:CDS |
| GAGACTAGAGCTGCTTGAAG+GGG | 0.611311 | 2.3:-40109381 | MS.gene67662:CDS |
| TGCACTTGAAGTGCTTACCA+TGG | 0.613852 | 2.3:-40111990 | MS.gene67662:CDS |
| TCTTTGCCTTCTCCTCAACA+AGG | 0.617660 | 2.3:+40108683 | None:intergenic |
| ATAGAAGTTGAAGATCAAAG+TGG | 0.620042 | 2.3:-40112246 | MS.gene67662:CDS |
| GTTCAGTCTCTCCAGATCCA+CGG | 0.623737 | 2.3:+40108508 | None:intergenic |
| GCACTTGAAGTGCTTACCAT+GGG | 0.624029 | 2.3:-40111989 | MS.gene67662:CDS |
| ACAAGAGACTGACCCTGTTG+AGG | 0.629157 | 2.3:+40114534 | None:intergenic |
| GACCACCTTGTAAGAGTCTG+AGG | 0.631446 | 2.3:+40109571 | None:intergenic |
| AATGAACAATCAAGATGTTG+GGG | 0.637210 | 2.3:-40108719 | MS.gene67662:CDS |
| TAAGGAACTAACCTCTCCCA+TGG | 0.639510 | 2.3:+40111973 | None:intergenic |
| TCCAATACTGCAAATTGACA+TGG | 0.640785 | 2.3:-40109703 | MS.gene67662:CDS |
| AATTGAAGATAGCAGGAACA+TGG | 0.644813 | 2.3:-40114761 | MS.gene67662:CDS |
| ATCCACGGCCTTCTTTAAGG+GGG | 0.652056 | 2.3:+40108523 | None:intergenic |
| AAGACTGACAGCACAACCTG+AGG | 0.658542 | 2.3:-40107878 | MS.gene67662:CDS |
| CAGGGAGCAAAAGCGGTATG+GGG | 0.658721 | 2.3:-40108549 | MS.gene67662:CDS |
| ACAAGGTGGTCGCTATCCAG+AGG | 0.659802 | 2.3:-40109559 | MS.gene67662:CDS |
| ACAGCTGCAAGTGCCAGATG+AGG | 0.661882 | 2.3:-40108800 | MS.gene67662:intron |
| CGCCTCAGACTCTTACAAGG+TGG | 0.663380 | 2.3:-40109573 | MS.gene67662:CDS |
| TAAAGGTTAAGATCGAGTCA+AGG | 0.665127 | 2.3:-40108120 | MS.gene67662:intron |
| TTGGCTGAAAGGCATGCAGA+TGG | 0.670570 | 2.3:-40112294 | MS.gene67662:CDS |
| CATTCTAGACCAAATGAATG+GGG | 0.681680 | 2.3:-40107764 | MS.gene67662:CDS |
| GACTGATGCTTCATGCAAAG+GGG | 0.691968 | 2.3:-40112045 | MS.gene67662:CDS |
| CACCTTGTAAGAGTCTGAGG+CGG | 0.705300 | 2.3:+40109574 | None:intergenic |
| TAGGATCAGAGATTGATCAG+AGG | 0.717978 | 2.3:-40112209 | MS.gene67662:intron |
| ATGAACAATCAAGATGTTGG+GGG | 0.720357 | 2.3:-40108718 | MS.gene67662:CDS |
| ACTGTCACTTCTCCTCAACA+GGG | 0.732804 | 2.3:-40114546 | MS.gene67662:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 40107591 | 40114790 | 40107591 | ID=MS.gene67662 |
| chr2.3 | mRNA | 40107591 | 40114790 | 40107591 | ID=MS.gene67662.t1;Parent=MS.gene67662 |
| chr2.3 | exon | 40114495 | 40114790 | 40114495 | ID=MS.gene67662.t1.exon1;Parent=MS.gene67662.t1 |
| chr2.3 | CDS | 40114495 | 40114790 | 40114495 | ID=cds.MS.gene67662.t1;Parent=MS.gene67662.t1 |
| chr2.3 | exon | 40112210 | 40112332 | 40112210 | ID=MS.gene67662.t1.exon2;Parent=MS.gene67662.t1 |
| chr2.3 | CDS | 40112210 | 40112332 | 40112210 | ID=cds.MS.gene67662.t1;Parent=MS.gene67662.t1 |
| chr2.3 | exon | 40111985 | 40112081 | 40111985 | ID=MS.gene67662.t1.exon3;Parent=MS.gene67662.t1 |
| chr2.3 | CDS | 40111985 | 40112081 | 40111985 | ID=cds.MS.gene67662.t1;Parent=MS.gene67662.t1 |
| chr2.3 | exon | 40111259 | 40111294 | 40111259 | ID=MS.gene67662.t1.exon4;Parent=MS.gene67662.t1 |
| chr2.3 | CDS | 40111259 | 40111294 | 40111259 | ID=cds.MS.gene67662.t1;Parent=MS.gene67662.t1 |
| chr2.3 | exon | 40109552 | 40109739 | 40109552 | ID=MS.gene67662.t1.exon5;Parent=MS.gene67662.t1 |
| chr2.3 | CDS | 40109552 | 40109739 | 40109552 | ID=cds.MS.gene67662.t1;Parent=MS.gene67662.t1 |
| chr2.3 | exon | 40109307 | 40109409 | 40109307 | ID=MS.gene67662.t1.exon6;Parent=MS.gene67662.t1 |
| chr2.3 | CDS | 40109307 | 40109409 | 40109307 | ID=cds.MS.gene67662.t1;Parent=MS.gene67662.t1 |
| chr2.3 | exon | 40108637 | 40108818 | 40108637 | ID=MS.gene67662.t1.exon7;Parent=MS.gene67662.t1 |
| chr2.3 | CDS | 40108637 | 40108818 | 40108637 | ID=cds.MS.gene67662.t1;Parent=MS.gene67662.t1 |
| chr2.3 | exon | 40108491 | 40108568 | 40108491 | ID=MS.gene67662.t1.exon8;Parent=MS.gene67662.t1 |
| chr2.3 | CDS | 40108491 | 40108568 | 40108491 | ID=cds.MS.gene67662.t1;Parent=MS.gene67662.t1 |
| chr2.3 | exon | 40108209 | 40108311 | 40108209 | ID=MS.gene67662.t1.exon9;Parent=MS.gene67662.t1 |
| chr2.3 | CDS | 40108209 | 40108311 | 40108209 | ID=cds.MS.gene67662.t1;Parent=MS.gene67662.t1 |
| chr2.3 | exon | 40108044 | 40108137 | 40108044 | ID=MS.gene67662.t1.exon10;Parent=MS.gene67662.t1 |
| chr2.3 | CDS | 40108044 | 40108137 | 40108044 | ID=cds.MS.gene67662.t1;Parent=MS.gene67662.t1 |
| chr2.3 | exon | 40107591 | 40107946 | 40107591 | ID=MS.gene67662.t1.exon11;Parent=MS.gene67662.t1 |
| chr2.3 | CDS | 40107591 | 40107946 | 40107591 | ID=cds.MS.gene67662.t1;Parent=MS.gene67662.t1 |
| Gene Sequence |
| Protein sequence |
