Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90585.t1 | XP_013463860.1 | 96.6 | 551 | 12 | 1 | 1 | 551 | 1 | 544 | 1.70E-287 | 998 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90585.t1 | P54729 | 26.6 | 403 | 266 | 9 | 60 | 451 | 142 | 525 | 5.7e-26 | 120.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90585.t1 | A0A072VIE6 | 96.6 | 551 | 12 | 1 | 1 | 551 | 1 | 544 | 1.2e-287 | 998.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene90585 | 0.839226 | 1.80E-57 | -1.69E-46 |
| MS.gene049159 | MS.gene90585 | 0.847767 | 9.39E-60 | -1.69E-46 |
| MS.gene04918 | MS.gene90585 | 0.804276 | 2.33E-49 | -1.69E-46 |
| MS.gene049254 | MS.gene90585 | 0.843794 | 1.13E-58 | -1.69E-46 |
| MS.gene049283 | MS.gene90585 | 0.842473 | 2.53E-58 | -1.69E-46 |
| MS.gene049368 | MS.gene90585 | 0.835491 | 1.63E-56 | -1.69E-46 |
| MS.gene049404 | MS.gene90585 | 0.803642 | 3.16E-49 | -1.69E-46 |
| MS.gene049419 | MS.gene90585 | -0.810953 | 8.92E-51 | -1.69E-46 |
| MS.gene049435 | MS.gene90585 | 0.801747 | 7.78E-49 | -1.69E-46 |
| MS.gene049452 | MS.gene90585 | 0.831053 | 2.08E-55 | -1.69E-46 |
| MS.gene049499 | MS.gene90585 | 0.824784 | 6.69E-54 | -1.69E-46 |
| MS.gene049983 | MS.gene90585 | 0.865407 | 6.04E-65 | -1.69E-46 |
| MS.gene050073 | MS.gene90585 | 0.800203 | 1.61E-48 | -1.69E-46 |
| MS.gene050105 | MS.gene90585 | 0.810711 | 1.01E-50 | -1.69E-46 |
| MS.gene050414 | MS.gene90585 | 0.800279 | 1.55E-48 | -1.69E-46 |
| MS.gene050442 | MS.gene90585 | 0.801914 | 7.19E-49 | -1.69E-46 |
| MS.gene050551 | MS.gene90585 | 0.80404 | 2.61E-49 | -1.69E-46 |
| MS.gene050559 | MS.gene90585 | 0.8573 | 1.79E-62 | -1.69E-46 |
| MS.gene050561 | MS.gene90585 | 0.855747 | 5.13E-62 | -1.69E-46 |
| MS.gene050562 | MS.gene90585 | 0.849262 | 3.62E-60 | -1.69E-46 |
| MS.gene050605 | MS.gene90585 | 0.801437 | 9.01E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene90585 | 0.829037 | 6.44E-55 | -1.69E-46 |
| MS.gene050654 | MS.gene90585 | 0.843677 | 1.21E-58 | -1.69E-46 |
| MS.gene050689 | MS.gene90585 | 0.820658 | 6.11E-53 | -1.69E-46 |
| MS.gene050759 | MS.gene90585 | 0.847578 | 1.06E-59 | -1.69E-46 |
| MS.gene050962 | MS.gene90585 | 0.838301 | 3.12E-57 | -1.69E-46 |
| MS.gene051198 | MS.gene90585 | 0.828828 | 7.24E-55 | -1.69E-46 |
| MS.gene051279 | MS.gene90585 | 0.836273 | 1.03E-56 | -1.69E-46 |
| MS.gene051332 | MS.gene90585 | 0.811655 | 6.28E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene90585 | 0.805698 | 1.18E-49 | -1.69E-46 |
| MS.gene051363 | MS.gene90585 | 0.826715 | 2.33E-54 | -1.69E-46 |
| MS.gene051365 | MS.gene90585 | 0.80504 | 1.62E-49 | -1.69E-46 |
| MS.gene051543 | MS.gene90585 | 0.800858 | 1.18E-48 | -1.69E-46 |
| MS.gene051597 | MS.gene90585 | 0.806043 | 9.96E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene90585 | 0.852747 | 3.77E-61 | -1.69E-46 |
| MS.gene051800 | MS.gene90585 | 0.823438 | 1.39E-53 | -1.69E-46 |
| MS.gene051975 | MS.gene90585 | 0.825287 | 5.09E-54 | -1.69E-46 |
| MS.gene052012 | MS.gene90585 | 0.805685 | 1.18E-49 | -1.69E-46 |
| MS.gene052108 | MS.gene90585 | 0.820126 | 8.09E-53 | -1.69E-46 |
| MS.gene052239 | MS.gene90585 | -0.818735 | 1.68E-52 | -1.69E-46 |
| MS.gene052307 | MS.gene90585 | 0.809735 | 1.63E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene90585 | 0.815318 | 9.83E-52 | -1.69E-46 |
| MS.gene052500 | MS.gene90585 | 0.813038 | 3.13E-51 | -1.69E-46 |
| MS.gene052502 | MS.gene90585 | 0.800406 | 1.46E-48 | -1.69E-46 |
| MS.gene052516 | MS.gene90585 | 0.816891 | 4.38E-52 | -1.69E-46 |
| MS.gene052519 | MS.gene90585 | 0.806201 | 9.23E-50 | -1.69E-46 |
| MS.gene052534 | MS.gene90585 | 0.809634 | 1.72E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene90585 | 0.827147 | 1.84E-54 | -1.69E-46 |
| MS.gene052584 | MS.gene90585 | 0.829639 | 4.60E-55 | -1.69E-46 |
| MS.gene052609 | MS.gene90585 | 0.8289 | 6.95E-55 | -1.69E-46 |
| MS.gene052669 | MS.gene90585 | 0.802958 | 4.38E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene90585 | 0.808251 | 3.39E-50 | -1.69E-46 |
| MS.gene052675 | MS.gene90585 | 0.810521 | 1.11E-50 | -1.69E-46 |
| MS.gene052677 | MS.gene90585 | 0.814145 | 1.79E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene90585 | 0.80669 | 7.28E-50 | -1.69E-46 |
| MS.gene052775 | MS.gene90585 | 0.83869 | 2.48E-57 | -1.69E-46 |
| MS.gene052776 | MS.gene90585 | 0.82321 | 1.57E-53 | -1.69E-46 |
| MS.gene052826 | MS.gene90585 | 0.806951 | 6.41E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene90585 | 0.809805 | 1.58E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene90585 | 0.8003 | 1.54E-48 | -1.69E-46 |
| MS.gene052954 | MS.gene90585 | 0.837088 | 6.39E-57 | -1.69E-46 |
| MS.gene053006 | MS.gene90585 | 0.819651 | 1.04E-52 | -1.69E-46 |
| MS.gene053008 | MS.gene90585 | 0.809804 | 1.58E-50 | -1.69E-46 |
| MS.gene053079 | MS.gene90585 | 0.853696 | 2.01E-61 | -1.69E-46 |
| MS.gene05308 | MS.gene90585 | 0.82573 | 4.00E-54 | -1.69E-46 |
| MS.gene053226 | MS.gene90585 | 0.861261 | 1.16E-63 | -1.69E-46 |
| MS.gene053321 | MS.gene90585 | 0.815635 | 8.36E-52 | -1.69E-46 |
| MS.gene053541 | MS.gene90585 | 0.806851 | 6.73E-50 | -1.69E-46 |
| MS.gene053542 | MS.gene90585 | 0.823857 | 1.10E-53 | -1.69E-46 |
| MS.gene05364 | MS.gene90585 | 0.842726 | 2.17E-58 | -1.69E-46 |
| MS.gene053931 | MS.gene90585 | 0.859041 | 5.44E-63 | -1.69E-46 |
| MS.gene05415 | MS.gene90585 | 0.807443 | 5.04E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene90585 | 0.840883 | 6.65E-58 | -1.69E-46 |
| MS.gene054576 | MS.gene90585 | 0.804982 | 1.66E-49 | -1.69E-46 |
| MS.gene05458 | MS.gene90585 | 0.804955 | 1.68E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene90585 | 0.868226 | 7.64E-66 | -1.69E-46 |
| MS.gene054657 | MS.gene90585 | 0.829369 | 5.35E-55 | -1.69E-46 |
| MS.gene054892 | MS.gene90585 | 0.827717 | 1.34E-54 | -1.69E-46 |
| MS.gene054893 | MS.gene90585 | 0.832969 | 6.98E-56 | -1.69E-46 |
| MS.gene054994 | MS.gene90585 | 0.826883 | 2.12E-54 | -1.69E-46 |
| MS.gene05517 | MS.gene90585 | 0.830325 | 3.13E-55 | -1.69E-46 |
| MS.gene055222 | MS.gene90585 | 0.838004 | 3.72E-57 | -1.69E-46 |
| MS.gene055513 | MS.gene90585 | 0.830007 | 3.74E-55 | -1.69E-46 |
| MS.gene055586 | MS.gene90585 | 0.8224 | 2.42E-53 | -1.69E-46 |
| MS.gene055623 | MS.gene90585 | 0.82054 | 6.50E-53 | -1.69E-46 |
| MS.gene055778 | MS.gene90585 | 0.800548 | 1.37E-48 | -1.69E-46 |
| MS.gene055818 | MS.gene90585 | 0.815918 | 7.23E-52 | -1.69E-46 |
| MS.gene055841 | MS.gene90585 | 0.847519 | 1.10E-59 | -1.69E-46 |
| MS.gene055864 | MS.gene90585 | 0.818015 | 2.44E-52 | -1.69E-46 |
| MS.gene055926 | MS.gene90585 | 0.806628 | 7.50E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene90585 | 0.831696 | 1.44E-55 | -1.69E-46 |
| MS.gene056162 | MS.gene90585 | 0.832658 | 8.34E-56 | -1.69E-46 |
| MS.gene056174 | MS.gene90585 | 0.834969 | 2.20E-56 | -1.69E-46 |
| MS.gene056181 | MS.gene90585 | 0.802183 | 6.33E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene90585 | 0.801679 | 8.04E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene90585 | 0.802736 | 4.87E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene90585 | 0.806155 | 9.43E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene90585 | 0.818245 | 2.17E-52 | -1.69E-46 |
| MS.gene056507 | MS.gene90585 | 0.810423 | 1.16E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene90585 | 0.826896 | 2.11E-54 | -1.69E-46 |
| MS.gene056776 | MS.gene90585 | 0.830528 | 2.79E-55 | -1.69E-46 |
| MS.gene05686 | MS.gene90585 | 0.875429 | 3.10E-68 | -1.69E-46 |
| MS.gene05689 | MS.gene90585 | 0.803458 | 3.45E-49 | -1.69E-46 |
| MS.gene05690 | MS.gene90585 | 0.821728 | 3.46E-53 | -1.69E-46 |
| MS.gene056973 | MS.gene90585 | 0.837176 | 6.07E-57 | -1.69E-46 |
| MS.gene056986 | MS.gene90585 | 0.801778 | 7.67E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene90585 | 0.84434 | 8.03E-59 | -1.69E-46 |
| MS.gene057102 | MS.gene90585 | 0.810832 | 9.47E-51 | -1.69E-46 |
| MS.gene057208 | MS.gene90585 | 0.883669 | 3.69E-71 | -1.69E-46 |
| MS.gene057392 | MS.gene90585 | 0.815882 | 7.36E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene90585 | 0.840769 | 7.12E-58 | -1.69E-46 |
| MS.gene057600 | MS.gene90585 | 0.803242 | 3.83E-49 | -1.69E-46 |
| MS.gene057601 | MS.gene90585 | 0.817914 | 2.58E-52 | -1.69E-46 |
| MS.gene057611 | MS.gene90585 | 0.801656 | 8.12E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene90585 | 0.827913 | 1.20E-54 | -1.69E-46 |
| MS.gene057855 | MS.gene90585 | 0.856444 | 3.20E-62 | -1.69E-46 |
| MS.gene057869 | MS.gene90585 | 0.836505 | 9.00E-57 | -1.69E-46 |
| MS.gene057915 | MS.gene90585 | 0.839653 | 1.39E-57 | -1.69E-46 |
| MS.gene058008 | MS.gene90585 | 0.834285 | 3.27E-56 | -1.69E-46 |
| MS.gene058009 | MS.gene90585 | 0.84903 | 4.20E-60 | -1.69E-46 |
| MS.gene058010 | MS.gene90585 | 0.867608 | 1.21E-65 | -1.69E-46 |
| MS.gene058081 | MS.gene90585 | 0.80061 | 1.33E-48 | -1.69E-46 |
| MS.gene058126 | MS.gene90585 | 0.822984 | 1.77E-53 | -1.69E-46 |
| MS.gene058292 | MS.gene90585 | 0.860415 | 2.10E-63 | -1.69E-46 |
| MS.gene058427 | MS.gene90585 | 0.832813 | 7.63E-56 | -1.69E-46 |
| MS.gene05847 | MS.gene90585 | 0.805171 | 1.52E-49 | -1.69E-46 |
| MS.gene058548 | MS.gene90585 | 0.828237 | 1.01E-54 | -1.69E-46 |
| MS.gene058595 | MS.gene90585 | 0.802551 | 5.32E-49 | -1.69E-46 |
| MS.gene058625 | MS.gene90585 | 0.827743 | 1.32E-54 | -1.69E-46 |
| MS.gene058781 | MS.gene90585 | 0.855388 | 6.53E-62 | -1.69E-46 |
| MS.gene058783 | MS.gene90585 | 0.856085 | 4.08E-62 | -1.69E-46 |
| MS.gene058979 | MS.gene90585 | 0.857442 | 1.63E-62 | -1.69E-46 |
| MS.gene05897 | MS.gene90585 | 0.814468 | 1.52E-51 | -1.69E-46 |
| MS.gene059439 | MS.gene90585 | 0.806049 | 9.93E-50 | -1.69E-46 |
| MS.gene05978 | MS.gene90585 | 0.823867 | 1.10E-53 | -1.69E-46 |
| MS.gene059842 | MS.gene90585 | 0.827574 | 1.45E-54 | -1.69E-46 |
| MS.gene05985 | MS.gene90585 | -0.827901 | 1.21E-54 | -1.69E-46 |
| MS.gene059965 | MS.gene90585 | 0.808221 | 3.44E-50 | -1.69E-46 |
| MS.gene060011 | MS.gene90585 | 0.810305 | 1.23E-50 | -1.69E-46 |
| MS.gene060167 | MS.gene90585 | 0.808342 | 3.25E-50 | -1.69E-46 |
| MS.gene060244 | MS.gene90585 | 0.810552 | 1.09E-50 | -1.69E-46 |
| MS.gene060259 | MS.gene90585 | 0.802209 | 6.25E-49 | -1.69E-46 |
| MS.gene060310 | MS.gene90585 | 0.807683 | 4.48E-50 | -1.69E-46 |
| MS.gene060365 | MS.gene90585 | 0.81383 | 2.10E-51 | -1.69E-46 |
| MS.gene060435 | MS.gene90585 | 0.836083 | 1.15E-56 | -1.69E-46 |
| MS.gene06052 | MS.gene90585 | 0.825187 | 5.37E-54 | -1.69E-46 |
| MS.gene060777 | MS.gene90585 | 0.825822 | 3.80E-54 | -1.69E-46 |
| MS.gene060803 | MS.gene90585 | 0.80746 | 5.00E-50 | -1.69E-46 |
| MS.gene060840 | MS.gene90585 | 0.810304 | 1.23E-50 | -1.69E-46 |
| MS.gene060932 | MS.gene90585 | 0.807157 | 5.80E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene90585 | 0.854155 | 1.49E-61 | -1.69E-46 |
| MS.gene060935 | MS.gene90585 | 0.871588 | 6.10E-67 | -1.69E-46 |
| MS.gene060937 | MS.gene90585 | 0.864962 | 8.33E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90585.t1 | MTR_2g450730 | 96.552 | 551 | 12 | 1 | 1 | 551 | 1 | 544 | 0.0 | 1078 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene90585.t1 | AT2G12550 | 56.050 | 562 | 227 | 8 | 1 | 546 | 1 | 558 | 0.0 | 632 |
Find 128 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAAATCATCTTCTTATT+TGG | 0.145142 | 2.1:+42065573 | None:intergenic |
| TGTAAATCAGAATTGGTTTC+TGG | 0.155036 | 2.1:+42066198 | None:intergenic |
| CAGATCCACGGCCTTCTTTA+AGG | 0.187611 | 2.1:+42066510 | None:intergenic |
| CTACTCACCTCAATGACTTT+TGG | 0.271684 | 2.1:+42069276 | None:intergenic |
| AGAAACCAATTCTGATTTAC+AGG | 0.272571 | 2.1:-42066196 | MS.gene90585:intron |
| TACTGTCACTTCTCCTCAAC+AGG | 0.299237 | 2.1:-42072325 | MS.gene90585:CDS |
| GGGGTGGTGGCATTTCATTC+TGG | 0.301341 | 2.1:-42067390 | MS.gene90585:CDS |
| TACCTAATTGGGTTAGGGTT+AGG | 0.307949 | 2.1:+42072373 | None:intergenic |
| TCATGCTACGGGACATTAGA+TGG | 0.315239 | 2.1:-42067694 | MS.gene90585:CDS |
| GAATTCTACCAGCACAAATA+AGG | 0.341318 | 2.1:+42072415 | None:intergenic |
| ACCCTAACCCTAACCCAATT+AGG | 0.342476 | 2.1:-42072375 | MS.gene90585:CDS |
| AAGAAGTCGATTTAGAGAAT+TGG | 0.355332 | 2.1:-42072503 | MS.gene90585:CDS |
| CTGAACGAATTGGTCACTAT+TGG | 0.357481 | 2.1:-42066481 | MS.gene90585:CDS |
| GATCTTCAACCCCATTCATT+TGG | 0.359756 | 2.1:+42065752 | None:intergenic |
| ACCTAATTGGGTTAGGGTTA+GGG | 0.372520 | 2.1:+42072374 | None:intergenic |
| CTTAAAGAAGGCCGTGGATC+TGG | 0.374229 | 2.1:-42066509 | MS.gene90585:CDS |
| AGATCCACGGCCTTCTTTAA+GGG | 0.381674 | 2.1:+42066511 | None:intergenic |
| TGTTACCTGTAAATCAGAAT+TGG | 0.383655 | 2.1:+42066191 | None:intergenic |
| ACCATGTCAATTTGCAGTAT+TGG | 0.385264 | 2.1:+42067728 | None:intergenic |
| TGCAAAAGCGAAGTTTGTTC+AGG | 0.395049 | 2.1:-42067334 | MS.gene90585:intron |
| CTCATAGGCTTGCTCGTATT+AGG | 0.406605 | 2.1:-42072272 | MS.gene90585:intron |
| CTTGCCTTGATTTCTCCAAC+TGG | 0.414108 | 2.1:+42067367 | None:intergenic |
| TTTGATACCTAATTGGGTTA+GGG | 0.418819 | 2.1:+42072368 | None:intergenic |
| GAATGAACAATCAAGATGTT+GGG | 0.423602 | 2.1:-42066710 | MS.gene90585:CDS |
| TTCATTAACCTTATTTGTGC+TGG | 0.424720 | 2.1:-42072423 | MS.gene90585:CDS |
| CTGCAACTGCATTGGCTGAA+AGG | 0.425202 | 2.1:-42070341 | MS.gene90585:CDS |
| CATTGACAGGTACTCAGTTA+TGG | 0.425383 | 2.1:+42065618 | None:intergenic |
| TTCCTGCCCTAGCCATTTCA+AGG | 0.427968 | 2.1:+42067651 | None:intergenic |
| TGCTGGAAAGCGCCTTGAAA+TGG | 0.430491 | 2.1:-42067663 | MS.gene90585:CDS |
| GACATTCTAGACCAAATGAA+TGG | 0.434790 | 2.1:-42065763 | MS.gene90585:CDS |
| TGCCATTGATTTCCTTGTTG+AGG | 0.440595 | 2.1:-42066685 | MS.gene90585:CDS |
| GACATTGAAGTTAATATTGA+AGG | 0.441170 | 2.1:-42065646 | MS.gene90585:CDS |
| CCAGGGAGCAAAAGCGGTAT+GGG | 0.441248 | 2.1:-42066540 | MS.gene90585:intron |
| CGAATGAACAATCAAGATGT+TGG | 0.443559 | 2.1:-42066711 | MS.gene90585:CDS |
| GCAGCAGTTGAATTCATTTG+AGG | 0.444304 | 2.1:+42065838 | None:intergenic |
| TGAACGAATTGGTCACTATT+GGG | 0.444732 | 2.1:-42066480 | MS.gene90585:intron |
| TTCTTCACGTAACGAAGAAA+TGG | 0.446494 | 2.1:+42072479 | None:intergenic |
| AGTGACAGTAGCGAGAATCT+TGG | 0.449149 | 2.1:+42072338 | None:intergenic |
| ATTTGGCAGGGCAGTAATGA+TGG | 0.451862 | 2.1:-42070104 | MS.gene90585:intron |
| AGAAGAAAGGGATGTGGAGA+TGG | 0.456681 | 2.1:-42065719 | MS.gene90585:CDS |
| ATCACAATAAAACAGAAGAA+AGG | 0.465013 | 2.1:-42065732 | MS.gene90585:CDS |
| GGCATTTCATTCTGGCCAGT+TGG | 0.467585 | 2.1:-42067382 | MS.gene90585:CDS |
| GGTTGCATATTCTCCGCCTC+AGG | 0.467805 | 2.1:+42065859 | None:intergenic |
| TTGAGACTAGAGCTGCTTGA+AGG | 0.470120 | 2.1:-42067411 | MS.gene90585:CDS |
| ACATTCTAGACCAAATGAAT+GGG | 0.470306 | 2.1:-42065762 | MS.gene90585:CDS |
| ACAAGTGATAAGGCCTCATC+TGG | 0.470489 | 2.1:+42066777 | None:intergenic |
| TTGAGGAACAAAGCTCTCAT+AGG | 0.473510 | 2.1:-42072287 | MS.gene90585:CDS |
| CTGTCAATGGTTGAGTCTGC+AGG | 0.473670 | 2.1:-42065604 | MS.gene90585:CDS |
| TCCAGGGAGCAAAAGCGGTA+TGG | 0.475210 | 2.1:-42066541 | MS.gene90585:intron |
| GAAGTGAGGATTATCGCAAT+TGG | 0.482473 | 2.1:+42072443 | None:intergenic |
| GGACTGATGCTTCATGCAAA+GGG | 0.483061 | 2.1:-42070082 | MS.gene90585:CDS |
| AAGATAGCAGGAACATGGTC+AGG | 0.484618 | 2.1:-42072534 | MS.gene90585:CDS |
| TGATTTCCTTGTTGAGGAGA+AGG | 0.485527 | 2.1:-42066679 | MS.gene90585:CDS |
| TCACAATAAAACAGAAGAAA+GGG | 0.485998 | 2.1:-42065731 | MS.gene90585:CDS |
| TCTGGAGAGACTGAACGAAT+TGG | 0.486099 | 2.1:-42066491 | MS.gene90585:CDS |
| CAGGGCAGCTGCAACTGCAT+TGG | 0.489381 | 2.1:-42070349 | MS.gene90585:CDS |
| CGCCTTGAAATGGCTAGGGC+AGG | 0.494912 | 2.1:-42067653 | MS.gene90585:CDS |
| CTTATCACTTGTTATGAGCA+TGG | 0.500815 | 2.1:-42066766 | MS.gene90585:CDS |
| CATGCTCATAACAAGTGATA+AGG | 0.501636 | 2.1:+42066767 | None:intergenic |
| AGAAAGGGATGTGGAGATGG+AGG | 0.502336 | 2.1:-42065716 | MS.gene90585:CDS |
| TTCAATGTCATAATCAGTAA+AGG | 0.506090 | 2.1:+42065660 | None:intergenic |
| ATAACTCACAGTGCAACCTC+TGG | 0.506415 | 2.1:+42067569 | None:intergenic |
| GCAGGAATTGAACGTGCTCA+TGG | 0.514358 | 2.1:-42067635 | MS.gene90585:CDS |
| CTCTCTGCAGATATAGCTAA+AGG | 0.515262 | 2.1:-42065688 | MS.gene90585:CDS |
| ATTAGATGGTTATCAGATGC+TGG | 0.515816 | 2.1:-42067680 | MS.gene90585:CDS |
| ACATTGAAGTTAATATTGAA+GGG | 0.516059 | 2.1:-42065645 | MS.gene90585:CDS |
| TGAGCATGGGCTACACTCAA+AGG | 0.519721 | 2.1:-42066752 | MS.gene90585:CDS |
| CTGGCCAGTTGGAGAAATCA+AGG | 0.520361 | 2.1:-42067371 | MS.gene90585:CDS |
| TTATCACTTGTTATGAGCAT+GGG | 0.521383 | 2.1:-42066765 | MS.gene90585:CDS |
| GATCCACGGCCTTCTTTAAG+GGG | 0.523385 | 2.1:+42066512 | None:intergenic |
| CTCCTCAACAAGGAAATCAA+TGG | 0.528274 | 2.1:+42066683 | None:intergenic |
| TGAGACTAGAGCTGCTTGAA+GGG | 0.538710 | 2.1:-42067410 | MS.gene90585:CDS |
| TACATCTTGCAGGTTTGAGA+AGG | 0.539933 | 2.1:-42066289 | MS.gene90585:intron |
| AAATGATACTCAGAAGGCAT+TGG | 0.543068 | 2.1:-42066235 | MS.gene90585:CDS |
| GAGCATGGGCTACACTCAAA+GGG | 0.544631 | 2.1:-42066751 | MS.gene90585:CDS |
| TTAAGATCGAGTCAAGGAAA+AGG | 0.546564 | 2.1:-42066102 | MS.gene90585:CDS |
| AGAGCTGCTTGAAGGGGTGG+TGG | 0.548955 | 2.1:-42067403 | MS.gene90585:CDS |
| ATGGCGAAATTGAAGATAGC+AGG | 0.549751 | 2.1:-42072546 | MS.gene90585:CDS |
| GGGTCAGTCTCTTGTTGTTG+AGG | 0.549824 | 2.1:-42072304 | MS.gene90585:CDS |
| AGTGGACAGAAAGTACGCTT+AGG | 0.551971 | 2.1:-42070264 | MS.gene90585:CDS |
| TACTGCAAATTGACATGGTA+TGG | 0.553370 | 2.1:-42067724 | MS.gene90585:CDS |
| CATAACTGAGTACCTGTCAA+TGG | 0.556905 | 2.1:-42065617 | MS.gene90585:CDS |
| CAGGAATTGAACGTGCTCAT+GGG | 0.566377 | 2.1:-42067634 | MS.gene90585:CDS |
| TTGTGATCCAAAAGTCATTG+AGG | 0.569044 | 2.1:-42069283 | MS.gene90585:intron |
| TATGGTGCTACTTCATGCTA+CGG | 0.569586 | 2.1:-42067706 | MS.gene90585:CDS |
| TGAAGTGCTTACCATGGGAG+AGG | 0.572323 | 2.1:-42070020 | MS.gene90585:intron |
| TTTGGCAGGGCAGTAATGAT+GGG | 0.575905 | 2.1:-42070103 | MS.gene90585:intron |
| TTCATTCCAGGGAGCAAAAG+CGG | 0.576218 | 2.1:-42066546 | MS.gene90585:intron |
| TAAAACAGAAGAAAGGGATG+TGG | 0.577129 | 2.1:-42065725 | MS.gene90585:CDS |
| CTCCGCCTCAGACTCTTACA+AGG | 0.581292 | 2.1:-42067602 | MS.gene90585:CDS |
| TCTATGTTAAAGTCTTCAAG+AGG | 0.581402 | 2.1:+42070300 | None:intergenic |
| CTGCAGACTCAACCATTGAC+AGG | 0.584881 | 2.1:+42065605 | None:intergenic |
| ATGGTGCTACTTCATGCTAC+GGG | 0.586062 | 2.1:-42067705 | MS.gene90585:CDS |
| ACTAGAGCTGCTTGAAGGGG+TGG | 0.592346 | 2.1:-42067406 | MS.gene90585:CDS |
| GAAAGCGCCTTGAAATGGCT+AGG | 0.596531 | 2.1:-42067658 | MS.gene90585:CDS |
| AATTGAACGTGCTCATGGGA+AGG | 0.600472 | 2.1:-42067630 | MS.gene90585:CDS |
| GGGACTGATGCTTCATGCAA+AGG | 0.602701 | 2.1:-42070083 | MS.gene90585:CDS |
| AAAGCGCCTTGAAATGGCTA+GGG | 0.603487 | 2.1:-42067657 | MS.gene90585:CDS |
| AAATGAAAATGATACTCAGA+AGG | 0.604629 | 2.1:-42066241 | MS.gene90585:CDS |
| CAAATAAGGTTAATGAAGTG+AGG | 0.605620 | 2.1:+42072429 | None:intergenic |
| CATTGAAGTTAATATTGAAG+GGG | 0.605658 | 2.1:-42065644 | MS.gene90585:CDS |
| GAGACTAGAGCTGCTTGAAG+GGG | 0.611311 | 2.1:-42067409 | MS.gene90585:CDS |
| TGCACTTGAAGTGCTTACCA+TGG | 0.613852 | 2.1:-42070026 | MS.gene90585:CDS |
| TCTTTGCCTTCTCCTCAACA+AGG | 0.617660 | 2.1:+42066673 | None:intergenic |
| ATAGAAGTTGAAGATCAAAG+TGG | 0.620042 | 2.1:-42070282 | MS.gene90585:CDS |
| ATCCACGGCCTTCTTTAAGG+GGG | 0.623039 | 2.1:+42066513 | None:intergenic |
| GTTCAGTCTCTCCAGATCCA+CGG | 0.623737 | 2.1:+42066498 | None:intergenic |
| GCACTTGAAGTGCTTACCAT+GGG | 0.624029 | 2.1:-42070025 | MS.gene90585:CDS |
| ACTGACAGCACAACCTGAGG+CGG | 0.628091 | 2.1:-42065872 | MS.gene90585:CDS |
| ACAAGAGACTGACCCTGTTG+AGG | 0.629157 | 2.1:+42072312 | None:intergenic |
| GACCACCTTGTAAGAGTCTG+AGG | 0.631446 | 2.1:+42067597 | None:intergenic |
| AATGAACAATCAAGATGTTG+GGG | 0.637210 | 2.1:-42066709 | MS.gene90585:CDS |
| TAAGGAACTAACCTCTCCCA+TGG | 0.639510 | 2.1:+42070009 | None:intergenic |
| TCCAATACTGCAAATTGACA+TGG | 0.640785 | 2.1:-42067729 | MS.gene90585:CDS |
| AATTGAAGATAGCAGGAACA+TGG | 0.644813 | 2.1:-42072539 | MS.gene90585:CDS |
| CAGGGAGCAAAAGCGGTATG+GGG | 0.658721 | 2.1:-42066539 | MS.gene90585:CDS |
| ACAAGGTGGTCGCTATCCAG+AGG | 0.659802 | 2.1:-42067585 | MS.gene90585:CDS |
| ACAGCTGCAAGTGCCAGATG+AGG | 0.661882 | 2.1:-42066790 | MS.gene90585:intron |
| CGCCTCAGACTCTTACAAGG+TGG | 0.663380 | 2.1:-42067599 | MS.gene90585:CDS |
| TAAAGGTTAAGATCGAGTCA+AGG | 0.665127 | 2.1:-42066108 | MS.gene90585:intron |
| TTGGCTGAAAGGCATGCAGA+TGG | 0.670570 | 2.1:-42070330 | MS.gene90585:CDS |
| AAGACTGACAGCACAACCTG+AGG | 0.672354 | 2.1:-42065875 | MS.gene90585:CDS |
| CATTCTAGACCAAATGAATG+GGG | 0.681680 | 2.1:-42065761 | MS.gene90585:CDS |
| GACTGATGCTTCATGCAAAG+GGG | 0.691968 | 2.1:-42070081 | MS.gene90585:CDS |
| CACCTTGTAAGAGTCTGAGG+CGG | 0.705300 | 2.1:+42067600 | None:intergenic |
| TAGGATCAGAGATTGATCAG+AGG | 0.717978 | 2.1:-42070245 | MS.gene90585:intron |
| ATGAACAATCAAGATGTTGG+GGG | 0.720357 | 2.1:-42066708 | MS.gene90585:CDS |
| ACTGTCACTTCTCCTCAACA+GGG | 0.732804 | 2.1:-42072324 | MS.gene90585:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 42065588 | 42072568 | 42065588 | ID=MS.gene90585 |
| chr2.1 | mRNA | 42065588 | 42072568 | 42065588 | ID=MS.gene90585.t1;Parent=MS.gene90585 |
| chr2.1 | exon | 42072273 | 42072568 | 42072273 | ID=MS.gene90585.t1.exon1;Parent=MS.gene90585.t1 |
| chr2.1 | CDS | 42072273 | 42072568 | 42072273 | ID=cds.MS.gene90585.t1;Parent=MS.gene90585.t1 |
| chr2.1 | exon | 42070246 | 42070368 | 42070246 | ID=MS.gene90585.t1.exon2;Parent=MS.gene90585.t1 |
| chr2.1 | CDS | 42070246 | 42070368 | 42070246 | ID=cds.MS.gene90585.t1;Parent=MS.gene90585.t1 |
| chr2.1 | exon | 42070021 | 42070117 | 42070021 | ID=MS.gene90585.t1.exon3;Parent=MS.gene90585.t1 |
| chr2.1 | CDS | 42070021 | 42070117 | 42070021 | ID=cds.MS.gene90585.t1;Parent=MS.gene90585.t1 |
| chr2.1 | exon | 42069284 | 42069319 | 42069284 | ID=MS.gene90585.t1.exon4;Parent=MS.gene90585.t1 |
| chr2.1 | CDS | 42069284 | 42069319 | 42069284 | ID=cds.MS.gene90585.t1;Parent=MS.gene90585.t1 |
| chr2.1 | exon | 42067578 | 42067765 | 42067578 | ID=MS.gene90585.t1.exon5;Parent=MS.gene90585.t1 |
| chr2.1 | CDS | 42067578 | 42067765 | 42067578 | ID=cds.MS.gene90585.t1;Parent=MS.gene90585.t1 |
| chr2.1 | exon | 42067335 | 42067437 | 42067335 | ID=MS.gene90585.t1.exon6;Parent=MS.gene90585.t1 |
| chr2.1 | CDS | 42067335 | 42067437 | 42067335 | ID=cds.MS.gene90585.t1;Parent=MS.gene90585.t1 |
| chr2.1 | exon | 42066627 | 42066808 | 42066627 | ID=MS.gene90585.t1.exon7;Parent=MS.gene90585.t1 |
| chr2.1 | CDS | 42066627 | 42066808 | 42066627 | ID=cds.MS.gene90585.t1;Parent=MS.gene90585.t1 |
| chr2.1 | exon | 42066481 | 42066558 | 42066481 | ID=MS.gene90585.t1.exon8;Parent=MS.gene90585.t1 |
| chr2.1 | CDS | 42066481 | 42066558 | 42066481 | ID=cds.MS.gene90585.t1;Parent=MS.gene90585.t1 |
| chr2.1 | exon | 42066197 | 42066299 | 42066197 | ID=MS.gene90585.t1.exon9;Parent=MS.gene90585.t1 |
| chr2.1 | CDS | 42066197 | 42066299 | 42066197 | ID=cds.MS.gene90585.t1;Parent=MS.gene90585.t1 |
| chr2.1 | exon | 42066032 | 42066125 | 42066032 | ID=MS.gene90585.t1.exon10;Parent=MS.gene90585.t1 |
| chr2.1 | CDS | 42066032 | 42066125 | 42066032 | ID=cds.MS.gene90585.t1;Parent=MS.gene90585.t1 |
| chr2.1 | exon | 42065588 | 42065943 | 42065588 | ID=MS.gene90585.t1.exon11;Parent=MS.gene90585.t1 |
| chr2.1 | CDS | 42065588 | 42065943 | 42065588 | ID=cds.MS.gene90585.t1;Parent=MS.gene90585.t1 |
| Gene Sequence |
| Protein sequence |
