Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95702.t1 | XP_013446237.1 | 96.3 | 544 | 20 | 0 | 1 | 544 | 1 | 544 | 8.80E-139 | 504.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95702.t1 | Q9C638 | 32.6 | 562 | 295 | 7 | 26 | 544 | 154 | 674 | 3.4e-14 | 81.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95702.t1 | A0A072TRW6 | 96.3 | 544 | 20 | 0 | 1 | 544 | 1 | 544 | 6.4e-139 | 504.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene95702 | 0.811721 | 6.08E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene95702 | 0.80915 | 2.18E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene95702 | 0.906703 | 1.12E-80 | -1.69E-46 |
| MS.gene049369 | MS.gene95702 | 0.893375 | 6.67E-75 | -1.69E-46 |
| MS.gene049396 | MS.gene95702 | 0.889631 | 2.04E-73 | -1.69E-46 |
| MS.gene049427 | MS.gene95702 | 0.830886 | 2.28E-55 | -1.69E-46 |
| MS.gene049488 | MS.gene95702 | 0.832918 | 7.19E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene95702 | 0.861263 | 1.16E-63 | -1.69E-46 |
| MS.gene049633 | MS.gene95702 | 0.801841 | 7.44E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene95702 | 0.836181 | 1.09E-56 | -1.69E-46 |
| MS.gene049662 | MS.gene95702 | 0.83551 | 1.61E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene95702 | 0.861451 | 1.02E-63 | -1.69E-46 |
| MS.gene050397 | MS.gene95702 | 0.823111 | 1.65E-53 | -1.69E-46 |
| MS.gene050432 | MS.gene95702 | 0.827596 | 1.43E-54 | -1.69E-46 |
| MS.gene050464 | MS.gene95702 | 0.800886 | 1.17E-48 | -1.69E-46 |
| MS.gene050499 | MS.gene95702 | 0.803588 | 3.25E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene95702 | 0.806558 | 7.76E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene95702 | 0.805193 | 1.50E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene95702 | 0.883802 | 3.30E-71 | -1.69E-46 |
| MS.gene050670 | MS.gene95702 | 0.901412 | 2.75E-78 | -1.69E-46 |
| MS.gene050686 | MS.gene95702 | 0.807903 | 4.03E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene95702 | 0.844443 | 7.54E-59 | -1.69E-46 |
| MS.gene050772 | MS.gene95702 | 0.860751 | 1.66E-63 | -1.69E-46 |
| MS.gene05080 | MS.gene95702 | 0.808709 | 2.71E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene95702 | 0.844357 | 7.95E-59 | -1.69E-46 |
| MS.gene050971 | MS.gene95702 | 0.854728 | 1.01E-61 | -1.69E-46 |
| MS.gene05105 | MS.gene95702 | 0.906455 | 1.46E-80 | -1.69E-46 |
| MS.gene051360 | MS.gene95702 | 0.84718 | 1.36E-59 | -1.69E-46 |
| MS.gene051387 | MS.gene95702 | 0.8652 | 7.02E-65 | -1.69E-46 |
| MS.gene051455 | MS.gene95702 | 0.801965 | 7.02E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene95702 | 0.834472 | 2.94E-56 | -1.69E-46 |
| MS.gene051605 | MS.gene95702 | 0.828879 | 7.03E-55 | -1.69E-46 |
| MS.gene051666 | MS.gene95702 | 0.842965 | 1.87E-58 | -1.69E-46 |
| MS.gene051692 | MS.gene95702 | 0.823988 | 1.03E-53 | -1.69E-46 |
| MS.gene051734 | MS.gene95702 | 0.80961 | 1.74E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene95702 | 0.840708 | 7.39E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene95702 | 0.818027 | 2.43E-52 | -1.69E-46 |
| MS.gene052011 | MS.gene95702 | -0.800334 | 1.51E-48 | -1.69E-46 |
| MS.gene052077 | MS.gene95702 | 0.81456 | 1.45E-51 | -1.69E-46 |
| MS.gene052134 | MS.gene95702 | 0.817235 | 3.66E-52 | -1.69E-46 |
| MS.gene052135 | MS.gene95702 | 0.832426 | 9.52E-56 | -1.69E-46 |
| MS.gene052136 | MS.gene95702 | 0.848687 | 5.23E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene95702 | 0.87649 | 1.34E-68 | -1.69E-46 |
| MS.gene052253 | MS.gene95702 | 0.853047 | 3.09E-61 | -1.69E-46 |
| MS.gene052310 | MS.gene95702 | 0.860745 | 1.67E-63 | -1.69E-46 |
| MS.gene052322 | MS.gene95702 | 0.803805 | 2.93E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene95702 | 0.856952 | 2.27E-62 | -1.69E-46 |
| MS.gene052346 | MS.gene95702 | 0.856159 | 3.88E-62 | -1.69E-46 |
| MS.gene052414 | MS.gene95702 | 0.879126 | 1.61E-69 | -1.69E-46 |
| MS.gene052421 | MS.gene95702 | 0.877795 | 4.72E-69 | -1.69E-46 |
| MS.gene052481 | MS.gene95702 | 0.838258 | 3.20E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene95702 | 0.837082 | 6.41E-57 | -1.69E-46 |
| MS.gene052485 | MS.gene95702 | 0.845849 | 3.14E-59 | -1.69E-46 |
| MS.gene052501 | MS.gene95702 | 0.837608 | 4.70E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene95702 | 0.849984 | 2.28E-60 | -1.69E-46 |
| MS.gene052615 | MS.gene95702 | 0.838779 | 2.35E-57 | -1.69E-46 |
| MS.gene052870 | MS.gene95702 | 0.805914 | 1.06E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene95702 | 0.814833 | 1.26E-51 | -1.69E-46 |
| MS.gene052999 | MS.gene95702 | 0.808651 | 2.79E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene95702 | 0.836199 | 1.08E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene95702 | 0.839928 | 1.18E-57 | -1.69E-46 |
| MS.gene053169 | MS.gene95702 | 0.803633 | 3.18E-49 | -1.69E-46 |
| MS.gene05316 | MS.gene95702 | 0.801253 | 9.83E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene95702 | 0.820162 | 7.93E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene95702 | 0.84462 | 6.75E-59 | -1.69E-46 |
| MS.gene053213 | MS.gene95702 | 0.8141 | 1.83E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene95702 | 0.887044 | 2.02E-72 | -1.69E-46 |
| MS.gene053574 | MS.gene95702 | 0.871861 | 4.95E-67 | -1.69E-46 |
| MS.gene053626 | MS.gene95702 | 0.806084 | 9.77E-50 | -1.69E-46 |
| MS.gene053758 | MS.gene95702 | 0.882779 | 7.82E-71 | -1.69E-46 |
| MS.gene053813 | MS.gene95702 | 0.831905 | 1.28E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene95702 | 0.810759 | 9.82E-51 | -1.69E-46 |
| MS.gene053912 | MS.gene95702 | 0.897667 | 1.13E-76 | -1.69E-46 |
| MS.gene053916 | MS.gene95702 | 0.831055 | 2.07E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene95702 | 0.806412 | 8.33E-50 | -1.69E-46 |
| MS.gene054349 | MS.gene95702 | 0.811311 | 7.46E-51 | -1.69E-46 |
| MS.gene054486 | MS.gene95702 | 0.813809 | 2.12E-51 | -1.69E-46 |
| MS.gene054556 | MS.gene95702 | 0.801811 | 7.55E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene95702 | -0.803278 | 3.76E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene95702 | 0.814754 | 1.31E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene95702 | 0.830901 | 2.26E-55 | -1.69E-46 |
| MS.gene054955 | MS.gene95702 | 0.830785 | 2.41E-55 | -1.69E-46 |
| MS.gene05505 | MS.gene95702 | 0.892354 | 1.71E-74 | -1.69E-46 |
| MS.gene055116 | MS.gene95702 | 0.896229 | 4.51E-76 | -1.69E-46 |
| MS.gene055206 | MS.gene95702 | 0.835361 | 1.76E-56 | -1.69E-46 |
| MS.gene055224 | MS.gene95702 | 0.82315 | 1.62E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene95702 | 0.811306 | 7.48E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene95702 | 0.845855 | 3.13E-59 | -1.69E-46 |
| MS.gene055369 | MS.gene95702 | 0.830184 | 3.39E-55 | -1.69E-46 |
| MS.gene055486 | MS.gene95702 | 0.831922 | 1.27E-55 | -1.69E-46 |
| MS.gene055539 | MS.gene95702 | 0.801888 | 7.28E-49 | -1.69E-46 |
| MS.gene055666 | MS.gene95702 | 0.809259 | 2.07E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene95702 | 0.855964 | 4.43E-62 | -1.69E-46 |
| MS.gene055741 | MS.gene95702 | 0.831677 | 1.46E-55 | -1.69E-46 |
| MS.gene055744 | MS.gene95702 | 0.837563 | 4.83E-57 | -1.69E-46 |
| MS.gene055909 | MS.gene95702 | 0.869015 | 4.25E-66 | -1.69E-46 |
| MS.gene055911 | MS.gene95702 | 0.863157 | 3.04E-64 | -1.69E-46 |
| MS.gene05592 | MS.gene95702 | 0.850128 | 2.07E-60 | -1.69E-46 |
| MS.gene055941 | MS.gene95702 | 0.819671 | 1.03E-52 | -1.69E-46 |
| MS.gene056166 | MS.gene95702 | 0.842539 | 2.43E-58 | -1.69E-46 |
| MS.gene056191 | MS.gene95702 | 0.815872 | 7.40E-52 | -1.69E-46 |
| MS.gene056330 | MS.gene95702 | -0.801717 | 7.89E-49 | -1.69E-46 |
| MS.gene056407 | MS.gene95702 | 0.83271 | 8.09E-56 | -1.69E-46 |
| MS.gene056410 | MS.gene95702 | 0.802602 | 5.19E-49 | -1.69E-46 |
| MS.gene056422 | MS.gene95702 | 0.873341 | 1.58E-67 | -1.69E-46 |
| MS.gene056448 | MS.gene95702 | 0.857744 | 1.32E-62 | -1.69E-46 |
| MS.gene056487 | MS.gene95702 | 0.830787 | 2.41E-55 | -1.69E-46 |
| MS.gene056511 | MS.gene95702 | 0.975399 | 7.00E-140 | -1.69E-46 |
| MS.gene056514 | MS.gene95702 | 0.806021 | 1.01E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene95702 | 0.838533 | 2.72E-57 | -1.69E-46 |
| MS.gene05664 | MS.gene95702 | 0.835194 | 1.93E-56 | -1.69E-46 |
| MS.gene056659 | MS.gene95702 | 0.832502 | 9.11E-56 | -1.69E-46 |
| MS.gene05666 | MS.gene95702 | 0.846545 | 2.03E-59 | -1.69E-46 |
| MS.gene056876 | MS.gene95702 | 0.820354 | 7.17E-53 | -1.69E-46 |
| MS.gene056897 | MS.gene95702 | 0.801836 | 7.46E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene95702 | 0.802612 | 5.17E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene95702 | 0.800083 | 1.70E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene95702 | 0.886589 | 3.00E-72 | -1.69E-46 |
| MS.gene057086 | MS.gene95702 | 0.807172 | 5.76E-50 | -1.69E-46 |
| MS.gene057123 | MS.gene95702 | 0.812152 | 4.90E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene95702 | 0.867465 | 1.34E-65 | -1.69E-46 |
| MS.gene057146 | MS.gene95702 | 0.85498 | 8.58E-62 | -1.69E-46 |
| MS.gene057310 | MS.gene95702 | 0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene95702 | 0.845178 | 4.78E-59 | -1.69E-46 |
| MS.gene05735 | MS.gene95702 | 0.841911 | 3.57E-58 | -1.69E-46 |
| MS.gene057396 | MS.gene95702 | 0.808823 | 2.56E-50 | -1.69E-46 |
| MS.gene057416 | MS.gene95702 | 0.84799 | 8.15E-60 | -1.69E-46 |
| MS.gene057448 | MS.gene95702 | 0.829706 | 4.43E-55 | -1.69E-46 |
| MS.gene057449 | MS.gene95702 | 0.837152 | 6.15E-57 | -1.69E-46 |
| MS.gene057450 | MS.gene95702 | 0.825791 | 3.87E-54 | -1.69E-46 |
| MS.gene057537 | MS.gene95702 | 0.802996 | 4.30E-49 | -1.69E-46 |
| MS.gene057610 | MS.gene95702 | 0.800439 | 1.44E-48 | -1.69E-46 |
| MS.gene057668 | MS.gene95702 | 0.804551 | 2.05E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene95702 | 0.889209 | 2.97E-73 | -1.69E-46 |
| MS.gene057749 | MS.gene95702 | 0.850444 | 1.69E-60 | -1.69E-46 |
| MS.gene057823 | MS.gene95702 | 0.854922 | 8.91E-62 | -1.69E-46 |
| MS.gene057856 | MS.gene95702 | 0.837074 | 6.44E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene95702 | 0.819422 | 1.17E-52 | -1.69E-46 |
| MS.gene057927 | MS.gene95702 | 0.841605 | 4.29E-58 | -1.69E-46 |
| MS.gene058006 | MS.gene95702 | 0.801439 | 9.00E-49 | -1.69E-46 |
| MS.gene058007 | MS.gene95702 | 0.873975 | 9.69E-68 | -1.69E-46 |
| MS.gene058019 | MS.gene95702 | 0.823586 | 1.28E-53 | -1.69E-46 |
| MS.gene058075 | MS.gene95702 | 0.836878 | 7.23E-57 | -1.69E-46 |
| MS.gene058090 | MS.gene95702 | 0.807923 | 3.99E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene95702 | 0.83711 | 6.31E-57 | -1.69E-46 |
| MS.gene058130 | MS.gene95702 | 0.843376 | 1.46E-58 | -1.69E-46 |
| MS.gene058338 | MS.gene95702 | 0.809912 | 1.50E-50 | -1.69E-46 |
| MS.gene058365 | MS.gene95702 | 0.806541 | 7.82E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene95702 | 0.854599 | 1.11E-61 | -1.69E-46 |
| MS.gene058444 | MS.gene95702 | 0.822168 | 2.74E-53 | -1.69E-46 |
| MS.gene058459 | MS.gene95702 | 0.811351 | 7.31E-51 | -1.69E-46 |
| MS.gene058660 | MS.gene95702 | 0.832626 | 8.49E-56 | -1.69E-46 |
| MS.gene058700 | MS.gene95702 | 0.852386 | 4.78E-61 | -1.69E-46 |
| MS.gene058790 | MS.gene95702 | 0.809735 | 1.63E-50 | -1.69E-46 |
| MS.gene05883 | MS.gene95702 | 0.802117 | 6.53E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene95702 | 0.898893 | 3.39E-77 | -1.69E-46 |
| MS.gene058948 | MS.gene95702 | 0.837423 | 5.24E-57 | -1.69E-46 |
| MS.gene058995 | MS.gene95702 | 0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene95702 | 0.834568 | 2.78E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene95702 | 0.816298 | 5.94E-52 | -1.69E-46 |
| MS.gene059141 | MS.gene95702 | 0.805662 | 1.20E-49 | -1.69E-46 |
| MS.gene059285 | MS.gene95702 | 0.817279 | 3.58E-52 | -1.69E-46 |
| MS.gene059305 | MS.gene95702 | 0.807062 | 6.07E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene95702 | 0.834001 | 3.86E-56 | -1.69E-46 |
| MS.gene059366 | MS.gene95702 | 0.888681 | 4.76E-73 | -1.69E-46 |
| MS.gene059367 | MS.gene95702 | 0.802226 | 6.20E-49 | -1.69E-46 |
| MS.gene059368 | MS.gene95702 | 0.84512 | 4.95E-59 | -1.69E-46 |
| MS.gene059420 | MS.gene95702 | 0.848716 | 5.13E-60 | -1.69E-46 |
| MS.gene059455 | MS.gene95702 | 0.849545 | 3.02E-60 | -1.69E-46 |
| MS.gene059536 | MS.gene95702 | 0.843482 | 1.36E-58 | -1.69E-46 |
| MS.gene059597 | MS.gene95702 | 0.826652 | 2.41E-54 | -1.69E-46 |
| MS.gene05959 | MS.gene95702 | 0.80004 | 1.74E-48 | -1.69E-46 |
| MS.gene059674 | MS.gene95702 | 0.870582 | 1.31E-66 | -1.69E-46 |
| MS.gene059676 | MS.gene95702 | 0.849635 | 2.85E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene95702 | 0.90591 | 2.60E-80 | -1.69E-46 |
| MS.gene059692 | MS.gene95702 | 0.876917 | 9.53E-69 | -1.69E-46 |
| MS.gene059695 | MS.gene95702 | 0.877991 | 4.03E-69 | -1.69E-46 |
| MS.gene059711 | MS.gene95702 | 0.885801 | 5.94E-72 | -1.69E-46 |
| MS.gene059807 | MS.gene95702 | 0.903654 | 2.78E-79 | -1.69E-46 |
| MS.gene05984 | MS.gene95702 | 0.804572 | 2.03E-49 | -1.69E-46 |
| MS.gene059876 | MS.gene95702 | 0.813197 | 2.89E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene95702 | 0.810841 | 9.43E-51 | -1.69E-46 |
| MS.gene060372 | MS.gene95702 | 0.818543 | 1.86E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene95702 | 0.873726 | 1.18E-67 | -1.69E-46 |
| MS.gene060482 | MS.gene95702 | 0.81107 | 8.42E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene95702 | 0.897912 | 8.87E-77 | -1.69E-46 |
| MS.gene060818 | MS.gene95702 | 0.867547 | 1.26E-65 | -1.69E-46 |
| MS.gene060835 | MS.gene95702 | 0.889316 | 2.70E-73 | -1.69E-46 |
| MS.gene060837 | MS.gene95702 | 0.905661 | 3.39E-80 | -1.69E-46 |
| MS.gene06092 | MS.gene95702 | 0.806661 | 7.38E-50 | -1.69E-46 |
| MS.gene06097 | MS.gene95702 | 0.822289 | 2.56E-53 | -1.69E-46 |
| MS.gene061041 | MS.gene95702 | 0.888198 | 7.30E-73 | -1.69E-46 |
| MS.gene061049 | MS.gene95702 | 0.814072 | 1.86E-51 | -1.69E-46 |
| MS.gene061051 | MS.gene95702 | -0.862703 | 4.20E-64 | -1.69E-46 |
| MS.gene061154 | MS.gene95702 | 0.868131 | 8.20E-66 | -1.69E-46 |
| MS.gene061159 | MS.gene95702 | 0.812807 | 3.52E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene95702 | 0.808341 | 3.25E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95702.t1 | MTR_8g070840 | 93.798 | 645 | 26 | 3 | 1 | 641 | 1 | 635 | 0.0 | 1075 |
| MS.gene95702.t1 | MTR_3g101660 | 51.420 | 669 | 263 | 10 | 24 | 641 | 288 | 945 | 0.0 | 545 |
| MS.gene95702.t1 | MTR_1g019490 | 47.612 | 691 | 289 | 14 | 3 | 640 | 246 | 916 | 2.14e-159 | 481 |
| MS.gene95702.t1 | MTR_3g060660 | 30.017 | 593 | 335 | 15 | 3 | 549 | 13 | 571 | 1.18e-23 | 106 |
| MS.gene95702.t1 | MTR_3g060660 | 31.765 | 425 | 268 | 8 | 136 | 549 | 147 | 560 | 2.64e-20 | 95.9 |
| MS.gene95702.t1 | MTR_4g029090 | 31.343 | 268 | 176 | 2 | 284 | 550 | 164 | 424 | 9.94e-19 | 90.5 |
| MS.gene95702.t1 | MTR_7g072550 | 26.966 | 267 | 188 | 2 | 285 | 551 | 177 | 436 | 4.99e-15 | 79.0 |
| MS.gene95702.t1 | MTR_5g096080 | 26.609 | 575 | 369 | 11 | 27 | 559 | 23 | 586 | 5.67e-13 | 72.4 |
| MS.gene95702.t1 | MTR_3g007920 | 26.610 | 590 | 350 | 16 | 27 | 559 | 23 | 586 | 8.20e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene95702.t1 | AT2G26570 | 47.507 | 682 | 284 | 14 | 7 | 638 | 148 | 805 | 3.20e-163 | 488 |
| MS.gene95702.t1 | AT2G26570 | 47.507 | 682 | 284 | 14 | 7 | 638 | 148 | 805 | 3.20e-163 | 488 |
| MS.gene95702.t1 | AT4G33390 | 45.142 | 669 | 286 | 8 | 16 | 638 | 145 | 778 | 1.41e-144 | 439 |
| MS.gene95702.t1 | AT5G42880 | 38.791 | 678 | 336 | 12 | 3 | 641 | 114 | 751 | 3.01e-94 | 306 |
| MS.gene95702.t1 | AT1G45545 | 36.196 | 652 | 320 | 12 | 26 | 637 | 154 | 749 | 2.16e-81 | 273 |
| MS.gene95702.t1 | AT1G45545 | 36.196 | 652 | 320 | 12 | 26 | 637 | 155 | 750 | 2.25e-81 | 273 |
| MS.gene95702.t1 | AT5G55860 | 28.990 | 614 | 328 | 21 | 27 | 576 | 22 | 591 | 4.84e-15 | 79.0 |
| MS.gene95702.t1 | AT1G12150 | 25.876 | 599 | 315 | 20 | 5 | 542 | 10 | 540 | 1.40e-12 | 71.2 |
| MS.gene95702.t1 | AT1G12150 | 25.876 | 599 | 315 | 20 | 5 | 542 | 10 | 540 | 1.40e-12 | 71.2 |
| MS.gene95702.t1 | AT2G38370 | 28.779 | 344 | 212 | 7 | 212 | 549 | 64 | 380 | 3.26e-12 | 69.7 |
| MS.gene95702.t1 | AT2G38370 | 29.341 | 334 | 203 | 7 | 222 | 549 | 91 | 397 | 3.29e-12 | 69.7 |
Find 85 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAAGATTGGACATGAATT+TGG | 0.194459 | 8.4:-32595656 | MS.gene95702:CDS |
| TCCAATTCTTCAGCTGTATT+TGG | 0.232993 | 8.4:+32595629 | None:intergenic |
| TTAAGACCAGAATCAGAATT+TGG | 0.238508 | 8.4:+32596156 | None:intergenic |
| GAGGAGTTCGGTGAAGAATT+TGG | 0.244644 | 8.4:+32593929 | None:intergenic |
| TTCCTTCTTTCTTTCTTCAT+TGG | 0.249061 | 8.4:+32595001 | None:intergenic |
| AGAGGAAGATGCTTCCAATT+TGG | 0.255053 | 8.4:+32595085 | None:intergenic |
| ACTTCACCAAATTCTGATTC+TGG | 0.286767 | 8.4:-32596162 | MS.gene95702:CDS |
| CCAACCTGACTAGGGGATTC+TGG | 0.296780 | 8.4:+32596192 | None:intergenic |
| GCTGCTGCTTGAAGTTTCTT+AGG | 0.302328 | 8.4:+32594735 | None:intergenic |
| AACCGAGTTAGCAGCATATA+TGG | 0.303826 | 8.4:-32595045 | MS.gene95702:CDS |
| TTGTGCTTTGGCTTCAAAAC+TGG | 0.316051 | 8.4:+32595472 | None:intergenic |
| ACCAAATACAGCTGAAGAAT+TGG | 0.316647 | 8.4:-32595630 | MS.gene95702:CDS |
| CAAGCAACACAAAATGAAAT+AGG | 0.325675 | 8.4:-32594597 | MS.gene95702:intron |
| TTCAACCTCAAGTTGTGCTT+TGG | 0.326913 | 8.4:+32595460 | None:intergenic |
| GAATGAAGCAAAAGAGATTA+TGG | 0.343738 | 8.4:-32594766 | MS.gene95702:CDS |
| AAGAGTTCTCAAATCCAAAT+TGG | 0.363045 | 8.4:-32595099 | MS.gene95702:CDS |
| TAGTGCTGCAGTTTCGGAAT+TGG | 0.366822 | 8.4:-32595426 | MS.gene95702:CDS |
| AAGAATTACATTCACTTGCT+TGG | 0.370848 | 8.4:+32593728 | None:intergenic |
| AATGCATAGTGCTGCAGTTT+CGG | 0.372224 | 8.4:-32595432 | MS.gene95702:CDS |
| CAAAGTAGCTAAGTTTGCTT+TGG | 0.373412 | 8.4:+32594632 | None:intergenic |
| CAAAGCAAACTTAGCTACTT+TGG | 0.381771 | 8.4:-32594631 | MS.gene95702:CDS |
| AGCTTCAATATTGCTTCAAT+CGG | 0.394447 | 8.4:-32594919 | MS.gene95702:CDS |
| AAAGATGCTGTGTCCAAGTT+TGG | 0.401818 | 8.4:-32596096 | MS.gene95702:CDS |
| GAAATCATTGTTTCCTTCAA+AGG | 0.403794 | 8.4:-32593783 | MS.gene95702:CDS |
| GGCGAACAGAGAAGCAAGAT+TGG | 0.404626 | 8.4:-32595668 | MS.gene95702:intron |
| AGCAGTTTGAGCTAATGATT+TGG | 0.404652 | 8.4:+32594695 | None:intergenic |
| GTGTAGAAAGAGATGAGCTT+CGG | 0.429173 | 8.4:-32595562 | MS.gene95702:CDS |
| AATAATAATAATATTGAAGC+TGG | 0.437906 | 8.4:-32593839 | MS.gene95702:CDS |
| ATCCACTATTCCTCCAAACT+TGG | 0.437962 | 8.4:+32596083 | None:intergenic |
| GGAATCTGAATTGAAAAGCT+TGG | 0.440695 | 8.4:-32594164 | MS.gene95702:CDS |
| AAGAACATGACAACCTTTGA+AGG | 0.442645 | 8.4:+32593770 | None:intergenic |
| TGTAGAAAGAGATGAGCTTC+GGG | 0.448050 | 8.4:-32595561 | MS.gene95702:CDS |
| GTCCAAGTTTGGAGGAATAG+TGG | 0.450809 | 8.4:-32596085 | MS.gene95702:CDS |
| TGACTAGGGGATTCTGGTTG+TGG | 0.452920 | 8.4:+32596198 | None:intergenic |
| CGGAGTAGTAGTTGCAGTAG+TGG | 0.463866 | 8.4:+32593871 | None:intergenic |
| TTCGACTCAAACGGCGCACA+TGG | 0.465039 | 8.4:-32595234 | MS.gene95702:CDS |
| AACCCGTAGAACTCAGAGTC+TGG | 0.472245 | 8.4:-32596055 | MS.gene95702:CDS |
| CTCCAGACTCTGAGTTCTAC+GGG | 0.484642 | 8.4:+32596053 | None:intergenic |
| GTTTCATCACCAACCTGACT+AGG | 0.491177 | 8.4:+32596183 | None:intergenic |
| CCTCCAGACTCTGAGTTCTA+CGG | 0.494095 | 8.4:+32596052 | None:intergenic |
| GTAGTAGAAGTAGTATCTAA+AGG | 0.496633 | 8.4:+32593893 | None:intergenic |
| GCTAAGTAAGAGAACTCAAA+AGG | 0.497779 | 8.4:-32594245 | MS.gene95702:CDS |
| ACTTGTGATTCGCAAAATTG+AGG | 0.498578 | 8.4:-32595522 | MS.gene95702:CDS |
| GATTCGCAAAATTGAGGAGC+TGG | 0.499740 | 8.4:-32595516 | MS.gene95702:CDS |
| ACAACCAGAATCCCCTAGTC+AGG | 0.501202 | 8.4:-32596196 | MS.gene95702:CDS |
| GTCATTGATTTCGACTCAAA+CGG | 0.505905 | 8.4:-32595243 | MS.gene95702:CDS |
| TCTTCACCGAACTCCTCAAA+GGG | 0.511102 | 8.4:-32593923 | MS.gene95702:CDS |
| AACCAATGAAGAAAGAAAGA+AGG | 0.513814 | 8.4:-32595003 | MS.gene95702:CDS |
| TAAAGATTCAATCAAAGCAT+TGG | 0.524472 | 8.4:-32594356 | MS.gene95702:CDS |
| TGAAGAGCTGTGTGTAAGAA+GGG | 0.527955 | 8.4:-32594122 | MS.gene95702:CDS |
| GAAGCCGAGGAACAAGCATC+AGG | 0.528541 | 8.4:-32595212 | MS.gene95702:CDS |
| AGCATTGGAGAGAAGTGAAT+CGG | 0.531673 | 8.4:-32594341 | MS.gene95702:CDS |
| TGAACTCGAACAATCAGAAA+AGG | 0.533244 | 8.4:-32595156 | MS.gene95702:CDS |
| TTCCATATATGCTGCTAACT+CGG | 0.533266 | 8.4:+32595043 | None:intergenic |
| GACGCCTGATGCTTGTTCCT+CGG | 0.540978 | 8.4:+32595208 | None:intergenic |
| TTCTTCACCGAACTCCTCAA+AGG | 0.545579 | 8.4:-32593924 | MS.gene95702:CDS |
| GGATGCTGCAACAGCCTCCT+CGG | 0.546548 | 8.4:+32595322 | None:intergenic |
| AGTTTGGAGGAATAGTGGAT+TGG | 0.547175 | 8.4:-32596080 | MS.gene95702:CDS |
| GGAGGCTGTTGCAGCATCCA+AGG | 0.547768 | 8.4:-32595318 | MS.gene95702:CDS |
| AGAACAAAGAAAAGCTAATG+AGG | 0.557400 | 8.4:-32594008 | MS.gene95702:CDS |
| TTTCAAATCAAGCAACAAAG+AGG | 0.562874 | 8.4:+32595067 | None:intergenic |
| AGCTGAGTTAATTGCAACAA+AGG | 0.564213 | 8.4:-32595267 | MS.gene95702:CDS |
| AGAAAGAAAGAAGGAACTAG+AGG | 0.565108 | 8.4:-32594994 | MS.gene95702:CDS |
| TTTCATCACCAACCTGACTA+GGG | 0.566617 | 8.4:+32596184 | None:intergenic |
| TTATTATTATTATCAGTAGA+CGG | 0.570596 | 8.4:+32593851 | None:intergenic |
| TAGAACAAGAGTTGAGAACA+TGG | 0.577986 | 8.4:-32594042 | MS.gene95702:CDS |
| ATGAAGAGCTGTGTGTAAGA+AGG | 0.583925 | 8.4:-32594123 | MS.gene95702:CDS |
| GATGCTGTGTCCAAGTTTGG+AGG | 0.587154 | 8.4:-32596093 | MS.gene95702:CDS |
| TAAGAGAACTCAAAAGGCTG+AGG | 0.589786 | 8.4:-32594239 | MS.gene95702:CDS |
| CCAGAATCCCCTAGTCAGGT+TGG | 0.590353 | 8.4:-32596192 | MS.gene95702:CDS |
| GAAGCTGGACCAGCTTCAGA+TGG | 0.598524 | 8.4:-32593824 | MS.gene95702:CDS |
| CAAAACTGGCTTCATCTGCA+AGG | 0.603066 | 8.4:+32595486 | None:intergenic |
| GCTTCGGGTAAAAGAAGAAG+TGG | 0.603179 | 8.4:-32595546 | MS.gene95702:CDS |
| TGCAAATTCACAGATTGAGA+TGG | 0.603818 | 8.4:-32594191 | MS.gene95702:CDS |
| GAGAGAAGTGAATCGGCTAG+AGG | 0.610416 | 8.4:-32594334 | MS.gene95702:CDS |
| AATGCCGAGAAAGCTGCAGA+AGG | 0.611021 | 8.4:-32594076 | MS.gene95702:CDS |
| GCATCTTTGACAGATTTCAA+AGG | 0.612629 | 8.4:+32596111 | None:intergenic |
| AGAAGTGAATCGGCTAGAGG+AGG | 0.613920 | 8.4:-32594331 | MS.gene95702:CDS |
| AACGGCGCACATGGAAGCCG+AGG | 0.615182 | 8.4:-32595225 | MS.gene95702:CDS |
| TTCACAGATTGAGATGGCAA+AGG | 0.617923 | 8.4:-32594185 | MS.gene95702:CDS |
| TTCATCACCAACCTGACTAG+GGG | 0.621675 | 8.4:+32596185 | None:intergenic |
| TGAAGCCAAAGCACAACTTG+AGG | 0.623555 | 8.4:-32595465 | MS.gene95702:CDS |
| TGCAGCTATCATCAATGCCG+AGG | 0.640751 | 8.4:-32595339 | MS.gene95702:CDS |
| AGCTATCATCAATGCCGAGG+AGG | 0.705985 | 8.4:-32595336 | MS.gene95702:CDS |
| CCGTAGAACTCAGAGTCTGG+AGG | 0.709746 | 8.4:-32596052 | MS.gene95702:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTAATAAAATCTTATAA+TGG | - | chr8.4:32594037-32594056 | MS.gene95702:CDS | 10.0% |
| !! | AATAATAATAATATTGAAGC+TGG | - | chr8.4:32596104-32596123 | MS.gene95702:CDS | 15.0% |
| !! | TTATTAAGTTATATATGACT+AGG | + | chr8.4:32594027-32594046 | None:intergenic | 15.0% |
| !! | TTATTATTATTATCAGTAGA+CGG | + | chr8.4:32596095-32596114 | None:intergenic | 15.0% |
| !!! | ATTTATACAGAACTTTTAAA+AGG | - | chr8.4:32595440-32595459 | MS.gene95702:CDS | 15.0% |
| !!! | CTAACTTTATTTCTAATAAT+AGG | - | chr8.4:32595537-32595556 | MS.gene95702:CDS | 15.0% |
| !! | AAAAAGAATTAGACTCTTTA+AGG | - | chr8.4:32594549-32594568 | MS.gene95702:intron | 20.0% |
| !! | TAAAGCAAGAATATAATTTG+AGG | + | chr8.4:32593939-32593958 | None:intergenic | 20.0% |
| !!! | AAAGTGATTTTTTTCACAAA+TGG | - | chr8.4:32595500-32595519 | MS.gene95702:CDS | 20.0% |
| !!! | AACTGATAAAAAAGTGATTT+TGG | - | chr8.4:32595396-32595415 | MS.gene95702:CDS | 20.0% |
| !!! | AAGTGATTTTTTTCACAAAT+GGG | - | chr8.4:32595501-32595520 | MS.gene95702:CDS | 20.0% |
| !!! | TACATTTTTCTTCTTAGTTT+TGG | - | chr8.4:32593959-32593978 | MS.gene95702:CDS | 20.0% |
| ! | AAGAAAGTAAAAAAGTCATG+TGG | + | chr8.4:32594237-32594256 | None:intergenic | 25.0% |
| ! | CATTGAAAAAACAACTAATG+AGG | - | chr8.4:32594985-32595004 | MS.gene95702:CDS | 25.0% |
| ! | TAAAAAAGTCATGTGGTTTA+GGG | + | chr8.4:32594230-32594249 | None:intergenic | 25.0% |
| ! | TAAAGATTCAATCAAAGCAT+TGG | - | chr8.4:32595587-32595606 | MS.gene95702:CDS | 25.0% |
| !! | AAAGAGCTATTATGTGATTT+TGG | - | chr8.4:32595463-32595482 | MS.gene95702:CDS | 25.0% |
| !! | CTTTTTCTTCACTTTCTTTA+AGG | + | chr8.4:32595081-32595100 | None:intergenic | 25.0% |
| !! | TGCTAAAGTTTCTGAAAAAT+TGG | - | chr8.4:32595563-32595582 | MS.gene95702:CDS | 25.0% |
| !!! | CTTTCTGTTTTGTTCTTTTT+GGG | - | chr8.4:32594254-32594273 | MS.gene95702:CDS | 25.0% |
| !!! | TATGTGATTTTGGAAAGTTT+AGG | - | chr8.4:32595473-32595492 | MS.gene95702:CDS | 25.0% |
| !!! | TCTTTCTGTTTTGTTCTTTT+TGG | - | chr8.4:32594253-32594272 | MS.gene95702:CDS | 25.0% |
| AACCAATGAAGAAAGAAAGA+AGG | - | chr8.4:32594940-32594959 | MS.gene95702:CDS | 30.0% | |
| AAGAGTTCTCAAATCCAAAT+TGG | - | chr8.4:32594844-32594863 | MS.gene95702:CDS | 30.0% | |
| AGAACAAAGAAAAGCTAATG+AGG | - | chr8.4:32595935-32595954 | MS.gene95702:intron | 30.0% | |
| AGCTTCAATATTGCTTCAAT+CGG | - | chr8.4:32595024-32595043 | MS.gene95702:CDS | 30.0% | |
| AGTTATATATGACTAGGACT+AGG | + | chr8.4:32594021-32594040 | None:intergenic | 30.0% | |
| CAAGCAACACAAAATGAAAT+AGG | - | chr8.4:32595346-32595365 | MS.gene95702:CDS | 30.0% | |
| GAAATCATTGTTTCCTTCAA+AGG | - | chr8.4:32596160-32596179 | MS.gene95702:CDS | 30.0% | |
| GAATGAAGCAAAAGAGATTA+TGG | - | chr8.4:32595177-32595196 | MS.gene95702:CDS | 30.0% | |
| GTAAAAAAGTCATGTGGTTT+AGG | + | chr8.4:32594231-32594250 | None:intergenic | 30.0% | |
| GTAGTAGAAGTAGTATCTAA+AGG | + | chr8.4:32596053-32596072 | None:intergenic | 30.0% | |
| GTTATATATGACTAGGACTA+GGG | + | chr8.4:32594020-32594039 | None:intergenic | 30.0% | |
| TTAAGACCAGAATCAGAATT+TGG | + | chr8.4:32593790-32593809 | None:intergenic | 30.0% | |
| TTATATATGACTAGGACTAG+GGG | + | chr8.4:32594019-32594038 | None:intergenic | 30.0% | |
| TTCCTTCTTTCTTTCTTCAT+TGG | + | chr8.4:32594945-32594964 | None:intergenic | 30.0% | |
| TTTCAAATCAAGCAACAAAG+AGG | + | chr8.4:32594879-32594898 | None:intergenic | 30.0% | |
| ! | ATGATTTTATAGTGAGTGGA+AGG | - | chr8.4:32594579-32594598 | MS.gene95702:intron | 30.0% |
| ! | GAGTATGATTTTATAGTGAG+TGG | - | chr8.4:32594575-32594594 | MS.gene95702:intron | 30.0% |
| ! | TGATTTTATAGTGAGTGGAA+GGG | - | chr8.4:32594580-32594599 | MS.gene95702:intron | 30.0% |
| !! | TAAATAGCGGATATATAGCA+TGG | - | chr8.4:32594071-32594090 | MS.gene95702:CDS | 30.0% |
| !! | TAGTTGTTTCTCATTCTTTG+AGG | - | chr8.4:32594180-32594199 | MS.gene95702:CDS | 30.0% |
| AAGAACATGACAACCTTTGA+AGG | + | chr8.4:32596176-32596195 | None:intergenic | 35.0% | |
| ACCAAATACAGCTGAAGAAT+TGG | - | chr8.4:32594313-32594332 | MS.gene95702:CDS | 35.0% | |
| ACTTCACCAAATTCTGATTC+TGG | - | chr8.4:32593781-32593800 | MS.gene95702:CDS | 35.0% | |
| ACTTGTGATTCGCAAAATTG+AGG | - | chr8.4:32594421-32594440 | MS.gene95702:intron | 35.0% | |
| AGAAAGAAAGAAGGAACTAG+AGG | - | chr8.4:32594949-32594968 | MS.gene95702:CDS | 35.0% | |
| AGCAAGATTGGACATGAATT+TGG | - | chr8.4:32594287-32594306 | MS.gene95702:CDS | 35.0% | |
| AGCAGTTTGAGCTAATGATT+TGG | + | chr8.4:32595251-32595270 | None:intergenic | 35.0% | |
| AGCTGAGTTAATTGCAACAA+AGG | - | chr8.4:32594676-32594695 | MS.gene95702:CDS | 35.0% | |
| CAAAGCAAACTTAGCTACTT+TGG | - | chr8.4:32595312-32595331 | MS.gene95702:CDS | 35.0% | |
| GCATCTTTGACAGATTTCAA+AGG | + | chr8.4:32593835-32593854 | None:intergenic | 35.0% | |
| GCTAAGTAAGAGAACTCAAA+AGG | - | chr8.4:32595698-32595717 | MS.gene95702:intron | 35.0% | |
| GGAATCTGAATTGAAAAGCT+TGG | - | chr8.4:32595779-32595798 | MS.gene95702:intron | 35.0% | |
| TAGAACAAGAGTTGAGAACA+TGG | - | chr8.4:32595901-32595920 | MS.gene95702:intron | 35.0% | |
| TCCAATTCTTCAGCTGTATT+TGG | + | chr8.4:32594317-32594336 | None:intergenic | 35.0% | |
| TGAACTCGAACAATCAGAAA+AGG | - | chr8.4:32594787-32594806 | MS.gene95702:CDS | 35.0% | |
| TGCAAATTCACAGATTGAGA+TGG | - | chr8.4:32595752-32595771 | MS.gene95702:intron | 35.0% | |
| TTCCATATATGCTGCTAACT+CGG | + | chr8.4:32594903-32594922 | None:intergenic | 35.0% | |
| ! | CAAAGTAGCTAAGTTTGCTT+TGG | + | chr8.4:32595314-32595333 | None:intergenic | 35.0% |
| ! | TAAAGGAGATTTTCCCTTTG+AGG | + | chr8.4:32596036-32596055 | None:intergenic | 35.0% |
| !! | GTCATTGATTTCGACTCAAA+CGG | - | chr8.4:32594700-32594719 | MS.gene95702:CDS | 35.0% |
| !! | TTTTTCTTTCCATCTGAAGC+TGG | + | chr8.4:32596131-32596150 | None:intergenic | 35.0% |
| AAAGATGCTGTGTCCAAGTT+TGG | - | chr8.4:32593847-32593866 | MS.gene95702:CDS | 40.0% | |
| AACCGAGTTAGCAGCATATA+TGG | - | chr8.4:32594898-32594917 | MS.gene95702:CDS | 40.0% | |
| AATGCATAGTGCTGCAGTTT+CGG | - | chr8.4:32594511-32594530 | MS.gene95702:intron | 40.0% | |
| AGAGGAAGATGCTTCCAATT+TGG | + | chr8.4:32594861-32594880 | None:intergenic | 40.0% | |
| ATCCACTATTCCTCCAAACT+TGG | + | chr8.4:32593863-32593882 | None:intergenic | 40.0% | |
| ATGAAGAGCTGTGTGTAAGA+AGG | - | chr8.4:32595820-32595839 | MS.gene95702:intron | 40.0% | |
| CAAGGAGATTGAAAAAGCAG+TGG | - | chr8.4:32594643-32594662 | MS.gene95702:CDS | 40.0% | |
| GTGTAGAAAGAGATGAGCTT+CGG | - | chr8.4:32594381-32594400 | MS.gene95702:CDS | 40.0% | |
| TAAGAGAACTCAAAAGGCTG+AGG | - | chr8.4:32595704-32595723 | MS.gene95702:intron | 40.0% | |
| TCATGTGGTTTAGGGAATTC+AGG | + | chr8.4:32594222-32594241 | None:intergenic | 40.0% | |
| TGAAGAGCTGTGTGTAAGAA+GGG | - | chr8.4:32595821-32595840 | MS.gene95702:intron | 40.0% | |
| TGTAGAAAGAGATGAGCTTC+GGG | - | chr8.4:32594382-32594401 | MS.gene95702:CDS | 40.0% | |
| TTCACAGATTGAGATGGCAA+AGG | - | chr8.4:32595758-32595777 | MS.gene95702:intron | 40.0% | |
| TTTCATCACCAACCTGACTA+GGG | + | chr8.4:32593762-32593781 | None:intergenic | 40.0% | |
| ! | AGCATTGGAGAGAAGTGAAT+CGG | - | chr8.4:32595602-32595621 | MS.gene95702:CDS | 40.0% |
| ! | CATATTGTGCTGATGCAAAG+TGG | - | chr8.4:32594126-32594145 | MS.gene95702:CDS | 40.0% |
| ! | GGACTAGTGTCGTTAAATAG+CGG | - | chr8.4:32594058-32594077 | MS.gene95702:CDS | 40.0% |
| ! | TTCAACCTCAAGTTGTGCTT+TGG | + | chr8.4:32594486-32594505 | None:intergenic | 40.0% |
| ! | TTGTGCTTTGGCTTCAAAAC+TGG | + | chr8.4:32594474-32594493 | None:intergenic | 40.0% |
| ! | TTTTCCTTCTGCAGCTTTCT+CGG | + | chr8.4:32595874-32595893 | None:intergenic | 40.0% |
| !! | AGTTTGGAGGAATAGTGGAT+TGG | - | chr8.4:32593863-32593882 | MS.gene95702:CDS | 40.0% |
| !! | GATTTTCCCTTTGAGGAGTT+CGG | + | chr8.4:32596029-32596048 | None:intergenic | 40.0% |
| !!! | CACTGCTTTTTCAATCTCCT+TGG | + | chr8.4:32594645-32594664 | None:intergenic | 40.0% |
| GATTCGCAAAATTGAGGAGC+TGG | - | chr8.4:32594427-32594446 | MS.gene95702:intron | 45.0% | |
| GCTTCGGGTAAAAGAAGAAG+TGG | - | chr8.4:32594397-32594416 | MS.gene95702:intron | 45.0% | |
| GTCCAAGTTTGGAGGAATAG+TGG | - | chr8.4:32593858-32593877 | MS.gene95702:CDS | 45.0% | |
| GTTTCATCACCAACCTGACT+AGG | + | chr8.4:32593763-32593782 | None:intergenic | 45.0% | |
| TAGTGCTGCAGTTTCGGAAT+TGG | - | chr8.4:32594517-32594536 | MS.gene95702:intron | 45.0% | |
| TCTTCACCGAACTCCTCAAA+GGG | - | chr8.4:32596020-32596039 | MS.gene95702:intron | 45.0% | |
| TGAAGCCAAAGCACAACTTG+AGG | - | chr8.4:32594478-32594497 | MS.gene95702:intron | 45.0% | |
| TTCATCACCAACCTGACTAG+GGG | + | chr8.4:32593761-32593780 | None:intergenic | 45.0% | |
| TTCTTCACCGAACTCCTCAA+AGG | - | chr8.4:32596019-32596038 | MS.gene95702:intron | 45.0% | |
| ! | CAAAACTGGCTTCATCTGCA+AGG | + | chr8.4:32594460-32594479 | None:intergenic | 45.0% |
| ! | GAGGAGTTCGGTGAAGAATT+TGG | + | chr8.4:32596017-32596036 | None:intergenic | 45.0% |
| ! | GCTGCTGCTTGAAGTTTCTT+AGG | + | chr8.4:32595211-32595230 | None:intergenic | 45.0% |
| AACCCGTAGAACTCAGAGTC+TGG | - | chr8.4:32593888-32593907 | MS.gene95702:CDS | 50.0% | |
| AATGCCGAGAAAGCTGCAGA+AGG | - | chr8.4:32595867-32595886 | MS.gene95702:intron | 50.0% | |
| ACAACCAGAATCCCCTAGTC+AGG | - | chr8.4:32593747-32593766 | MS.gene95702:CDS | 50.0% | |
| AGAAGTGAATCGGCTAGAGG+AGG | - | chr8.4:32595612-32595631 | MS.gene95702:CDS | 50.0% | |
| AGCTATCATCAATGCCGAGG+AGG | - | chr8.4:32594607-32594626 | MS.gene95702:CDS | 50.0% | |
| ATGACTAGGACTAGGGGAAG+TGG | + | chr8.4:32594013-32594032 | None:intergenic | 50.0% | |
| CCTCCAGACTCTGAGTTCTA+CGG | + | chr8.4:32593894-32593913 | None:intergenic | 50.0% | |
| CGGAGTAGTAGTTGCAGTAG+TGG | + | chr8.4:32596075-32596094 | None:intergenic | 50.0% | |
| CTCCAGACTCTGAGTTCTAC+GGG | + | chr8.4:32593893-32593912 | None:intergenic | 50.0% | |
| GAGAGAAGTGAATCGGCTAG+AGG | - | chr8.4:32595609-32595628 | MS.gene95702:CDS | 50.0% | |
| GATGCTGTGTCCAAGTTTGG+AGG | - | chr8.4:32593850-32593869 | MS.gene95702:CDS | 50.0% | |
| GGCGAACAGAGAAGCAAGAT+TGG | - | chr8.4:32594275-32594294 | MS.gene95702:CDS | 50.0% | |
| TGCAGCTATCATCAATGCCG+AGG | - | chr8.4:32594604-32594623 | MS.gene95702:CDS | 50.0% | |
| ! | TGACTAGGGGATTCTGGTTG+TGG | + | chr8.4:32593748-32593767 | None:intergenic | 50.0% |
| CCAACCTGACTAGGGGATTC+TGG | + | chr8.4:32593754-32593773 | None:intergenic | 55.0% | |
| CCAGAATCCCCTAGTCAGGT+TGG | - | chr8.4:32593751-32593770 | MS.gene95702:CDS | 55.0% | |
| CCGTAGAACTCAGAGTCTGG+AGG | - | chr8.4:32593891-32593910 | MS.gene95702:CDS | 55.0% | |
| GAAGCCGAGGAACAAGCATC+AGG | - | chr8.4:32594731-32594750 | MS.gene95702:CDS | 55.0% | |
| GAAGCTGGACCAGCTTCAGA+TGG | - | chr8.4:32596119-32596138 | MS.gene95702:CDS | 55.0% | |
| GACGCCTGATGCTTGTTCCT+CGG | + | chr8.4:32594738-32594757 | None:intergenic | 55.0% | |
| TTCGACTCAAACGGCGCACA+TGG | - | chr8.4:32594709-32594728 | MS.gene95702:CDS | 55.0% | |
| GGAGGCTGTTGCAGCATCCA+AGG | - | chr8.4:32594625-32594644 | MS.gene95702:CDS | 60.0% | |
| GGATGCTGCAACAGCCTCCT+CGG | + | chr8.4:32594624-32594643 | None:intergenic | 60.0% | |
| AACGGCGCACATGGAAGCCG+AGG | - | chr8.4:32594718-32594737 | MS.gene95702:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 32593739 | 32596226 | 32593739 | ID=MS.gene95702 |
| chr8.4 | mRNA | 32593739 | 32596226 | 32593739 | ID=MS.gene95702.t1;Parent=MS.gene95702 |
| chr8.4 | exon | 32596053 | 32596226 | 32596053 | ID=MS.gene95702.t1.exon1;Parent=MS.gene95702.t1 |
| chr8.4 | CDS | 32596053 | 32596226 | 32596053 | ID=cds.MS.gene95702.t1;Parent=MS.gene95702.t1 |
| chr8.4 | exon | 32594598 | 32595681 | 32594598 | ID=MS.gene95702.t1.exon2;Parent=MS.gene95702.t1 |
| chr8.4 | CDS | 32594598 | 32595681 | 32594598 | ID=cds.MS.gene95702.t1;Parent=MS.gene95702.t1 |
| chr8.4 | exon | 32593739 | 32594406 | 32593739 | ID=MS.gene95702.t1.exon3;Parent=MS.gene95702.t1 |
| chr8.4 | CDS | 32593739 | 32594406 | 32593739 | ID=cds.MS.gene95702.t1;Parent=MS.gene95702.t1 |
| Gene Sequence |
| Protein sequence |
