Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26111.t1 | XP_003616290.1 | 98.1 | 427 | 8 | 0 | 1 | 427 | 1 | 427 | 8.10E-205 | 723 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26111.t1 | Q9C8Y4 | 75.5 | 245 | 54 | 1 | 174 | 418 | 162 | 400 | 1.2e-92 | 341.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26111.t1 | G7K1Q0 | 98.1 | 427 | 8 | 0 | 1 | 427 | 1 | 427 | 5.8e-205 | 723.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene26111 | 0.848297 | 6.70E-60 | -1.69E-46 |
| MS.gene049356 | MS.gene26111 | 0.903542 | 3.12E-79 | -1.69E-46 |
| MS.gene049369 | MS.gene26111 | 0.892452 | 1.57E-74 | -1.69E-46 |
| MS.gene049396 | MS.gene26111 | 0.865562 | 5.40E-65 | -1.69E-46 |
| MS.gene049480 | MS.gene26111 | 0.816435 | 5.54E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene26111 | 0.808813 | 2.57E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene26111 | 0.816144 | 6.43E-52 | -1.69E-46 |
| MS.gene050060 | MS.gene26111 | 0.817137 | 3.85E-52 | -1.69E-46 |
| MS.gene050400 | MS.gene26111 | 0.814806 | 1.28E-51 | -1.69E-46 |
| MS.gene050426 | MS.gene26111 | -0.830258 | 3.25E-55 | -1.69E-46 |
| MS.gene050529 | MS.gene26111 | 0.810984 | 8.78E-51 | -1.69E-46 |
| MS.gene050553 | MS.gene26111 | 0.800437 | 1.44E-48 | -1.69E-46 |
| MS.gene050593 | MS.gene26111 | 0.833255 | 5.92E-56 | -1.69E-46 |
| MS.gene050670 | MS.gene26111 | 0.888455 | 5.82E-73 | -1.69E-46 |
| MS.gene050747 | MS.gene26111 | 0.802687 | 4.99E-49 | -1.69E-46 |
| MS.gene050809 | MS.gene26111 | -0.814192 | 1.75E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene26111 | 0.807722 | 4.40E-50 | -1.69E-46 |
| MS.gene050812 | MS.gene26111 | 0.804589 | 2.01E-49 | -1.69E-46 |
| MS.gene05081 | MS.gene26111 | 0.821157 | 4.69E-53 | -1.69E-46 |
| MS.gene050971 | MS.gene26111 | 0.86339 | 2.58E-64 | -1.69E-46 |
| MS.gene05105 | MS.gene26111 | 0.867715 | 1.12E-65 | -1.69E-46 |
| MS.gene051360 | MS.gene26111 | 0.848809 | 4.84E-60 | -1.69E-46 |
| MS.gene051387 | MS.gene26111 | 0.830083 | 3.59E-55 | -1.69E-46 |
| MS.gene051521 | MS.gene26111 | 0.823288 | 1.50E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene26111 | 0.850841 | 1.31E-60 | -1.69E-46 |
| MS.gene051605 | MS.gene26111 | 0.807179 | 5.73E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene26111 | 0.813584 | 2.38E-51 | -1.69E-46 |
| MS.gene051734 | MS.gene26111 | 0.840891 | 6.62E-58 | -1.69E-46 |
| MS.gene051838 | MS.gene26111 | 0.845769 | 3.30E-59 | -1.69E-46 |
| MS.gene051874 | MS.gene26111 | 0.804172 | 2.45E-49 | -1.69E-46 |
| MS.gene051941 | MS.gene26111 | 0.800182 | 1.62E-48 | -1.69E-46 |
| MS.gene052077 | MS.gene26111 | 0.840994 | 6.22E-58 | -1.69E-46 |
| MS.gene052134 | MS.gene26111 | 0.82575 | 3.95E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene26111 | 0.827044 | 1.94E-54 | -1.69E-46 |
| MS.gene052136 | MS.gene26111 | 0.838113 | 3.49E-57 | -1.69E-46 |
| MS.gene052188 | MS.gene26111 | 0.898944 | 3.23E-77 | -1.69E-46 |
| MS.gene052253 | MS.gene26111 | 0.829153 | 6.04E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene26111 | 0.842702 | 2.20E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene26111 | 0.872537 | 2.95E-67 | -1.69E-46 |
| MS.gene052346 | MS.gene26111 | 0.814795 | 1.28E-51 | -1.69E-46 |
| MS.gene052414 | MS.gene26111 | 0.885424 | 8.23E-72 | -1.69E-46 |
| MS.gene052421 | MS.gene26111 | 0.853599 | 2.15E-61 | -1.69E-46 |
| MS.gene052469 | MS.gene26111 | 0.833653 | 4.71E-56 | -1.69E-46 |
| MS.gene052481 | MS.gene26111 | 0.802698 | 4.96E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene26111 | 0.820897 | 5.38E-53 | -1.69E-46 |
| MS.gene052485 | MS.gene26111 | 0.82834 | 9.50E-55 | -1.69E-46 |
| MS.gene052501 | MS.gene26111 | 0.802555 | 5.31E-49 | -1.69E-46 |
| MS.gene052505 | MS.gene26111 | 0.803827 | 2.89E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene26111 | 0.83189 | 1.29E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene26111 | 0.818381 | 2.02E-52 | -1.69E-46 |
| MS.gene053103 | MS.gene26111 | 0.830383 | 3.03E-55 | -1.69E-46 |
| MS.gene053104 | MS.gene26111 | 0.818581 | 1.82E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene26111 | 0.818713 | 1.70E-52 | -1.69E-46 |
| MS.gene05316 | MS.gene26111 | 0.843888 | 1.06E-58 | -1.69E-46 |
| MS.gene053209 | MS.gene26111 | 0.811846 | 5.71E-51 | -1.69E-46 |
| MS.gene053449 | MS.gene26111 | 0.886718 | 2.68E-72 | -1.69E-46 |
| MS.gene053557 | MS.gene26111 | 0.821936 | 3.10E-53 | -1.69E-46 |
| MS.gene053758 | MS.gene26111 | 0.849568 | 2.98E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene26111 | 0.827203 | 1.78E-54 | -1.69E-46 |
| MS.gene053912 | MS.gene26111 | 0.884178 | 2.39E-71 | -1.69E-46 |
| MS.gene053916 | MS.gene26111 | 0.828288 | 9.77E-55 | -1.69E-46 |
| MS.gene054123 | MS.gene26111 | 0.82976 | 4.30E-55 | -1.69E-46 |
| MS.gene054349 | MS.gene26111 | 0.86129 | 1.14E-63 | -1.69E-46 |
| MS.gene054556 | MS.gene26111 | 0.828102 | 1.08E-54 | -1.69E-46 |
| MS.gene05494 | MS.gene26111 | 0.848402 | 6.27E-60 | -1.69E-46 |
| MS.gene054955 | MS.gene26111 | 0.810525 | 1.10E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene26111 | 0.859963 | 2.87E-63 | -1.69E-46 |
| MS.gene055116 | MS.gene26111 | 0.847224 | 1.32E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene26111 | 0.834839 | 2.38E-56 | -1.69E-46 |
| MS.gene055369 | MS.gene26111 | 0.806244 | 9.04E-50 | -1.69E-46 |
| MS.gene055539 | MS.gene26111 | 0.86069 | 1.73E-63 | -1.69E-46 |
| MS.gene05553 | MS.gene26111 | 0.850898 | 1.26E-60 | -1.69E-46 |
| MS.gene05556 | MS.gene26111 | 0.806066 | 9.85E-50 | -1.69E-46 |
| MS.gene055666 | MS.gene26111 | 0.807153 | 5.81E-50 | -1.69E-46 |
| MS.gene055741 | MS.gene26111 | 0.879723 | 9.87E-70 | -1.69E-46 |
| MS.gene055744 | MS.gene26111 | 0.884412 | 1.96E-71 | -1.69E-46 |
| MS.gene055909 | MS.gene26111 | 0.8589 | 6.00E-63 | -1.69E-46 |
| MS.gene055911 | MS.gene26111 | 0.860047 | 2.71E-63 | -1.69E-46 |
| MS.gene05592 | MS.gene26111 | 0.810539 | 1.10E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene26111 | 0.812176 | 4.84E-51 | -1.69E-46 |
| MS.gene056166 | MS.gene26111 | 0.826581 | 2.51E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene26111 | 0.816811 | 4.56E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene26111 | 0.854611 | 1.10E-61 | -1.69E-46 |
| MS.gene056511 | MS.gene26111 | 0.887443 | 1.42E-72 | -1.69E-46 |
| MS.gene056609 | MS.gene26111 | 0.818875 | 1.56E-52 | -1.69E-46 |
| MS.gene05664 | MS.gene26111 | 0.809521 | 1.82E-50 | -1.69E-46 |
| MS.gene056659 | MS.gene26111 | 0.831202 | 1.91E-55 | -1.69E-46 |
| MS.gene056719 | MS.gene26111 | 0.825991 | 3.47E-54 | -1.69E-46 |
| MS.gene056876 | MS.gene26111 | 0.834203 | 3.43E-56 | -1.69E-46 |
| MS.gene056897 | MS.gene26111 | 0.801966 | 7.02E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene26111 | 0.819172 | 1.34E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene26111 | 0.846718 | 1.82E-59 | -1.69E-46 |
| MS.gene057086 | MS.gene26111 | 0.804078 | 2.57E-49 | -1.69E-46 |
| MS.gene057124 | MS.gene26111 | 0.855263 | 7.09E-62 | -1.69E-46 |
| MS.gene057199 | MS.gene26111 | 0.807774 | 4.29E-50 | -1.69E-46 |
| MS.gene057289 | MS.gene26111 | 0.802766 | 4.80E-49 | -1.69E-46 |
| MS.gene05735 | MS.gene26111 | 0.818434 | 1.96E-52 | -1.69E-46 |
| MS.gene057396 | MS.gene26111 | 0.851121 | 1.09E-60 | -1.69E-46 |
| MS.gene057448 | MS.gene26111 | 0.820708 | 5.95E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene26111 | 0.801622 | 8.26E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene26111 | 0.817789 | 2.75E-52 | -1.69E-46 |
| MS.gene057537 | MS.gene26111 | 0.833912 | 4.06E-56 | -1.69E-46 |
| MS.gene057668 | MS.gene26111 | 0.806502 | 7.98E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene26111 | 0.860747 | 1.66E-63 | -1.69E-46 |
| MS.gene057749 | MS.gene26111 | 0.832743 | 7.94E-56 | -1.69E-46 |
| MS.gene057823 | MS.gene26111 | 0.844068 | 9.50E-59 | -1.69E-46 |
| MS.gene057856 | MS.gene26111 | 0.816559 | 5.19E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene26111 | 0.803264 | 3.79E-49 | -1.69E-46 |
| MS.gene057927 | MS.gene26111 | 0.841932 | 3.52E-58 | -1.69E-46 |
| MS.gene058007 | MS.gene26111 | 0.875239 | 3.60E-68 | -1.69E-46 |
| MS.gene058075 | MS.gene26111 | 0.845227 | 4.63E-59 | -1.69E-46 |
| MS.gene058082 | MS.gene26111 | 0.821624 | 3.66E-53 | -1.69E-46 |
| MS.gene058090 | MS.gene26111 | 0.81913 | 1.36E-52 | -1.69E-46 |
| MS.gene058120 | MS.gene26111 | 0.875182 | 3.77E-68 | -1.69E-46 |
| MS.gene058365 | MS.gene26111 | 0.812636 | 3.84E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene26111 | 0.856209 | 3.76E-62 | -1.69E-46 |
| MS.gene058444 | MS.gene26111 | 0.854877 | 9.19E-62 | -1.69E-46 |
| MS.gene058459 | MS.gene26111 | 0.817474 | 3.24E-52 | -1.69E-46 |
| MS.gene058700 | MS.gene26111 | 0.872235 | 3.72E-67 | -1.69E-46 |
| MS.gene058928 | MS.gene26111 | 0.876689 | 1.14E-68 | -1.69E-46 |
| MS.gene058948 | MS.gene26111 | 0.858144 | 1.01E-62 | -1.69E-46 |
| MS.gene05907 | MS.gene26111 | 0.819311 | 1.24E-52 | -1.69E-46 |
| MS.gene059285 | MS.gene26111 | 0.814061 | 1.87E-51 | -1.69E-46 |
| MS.gene059294 | MS.gene26111 | 0.804906 | 1.73E-49 | -1.69E-46 |
| MS.gene059305 | MS.gene26111 | 0.814259 | 1.69E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene26111 | 0.811547 | 6.63E-51 | -1.69E-46 |
| MS.gene059366 | MS.gene26111 | 0.860605 | 1.84E-63 | -1.69E-46 |
| MS.gene059368 | MS.gene26111 | 0.800426 | 1.45E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene26111 | 0.840786 | 7.05E-58 | -1.69E-46 |
| MS.gene059455 | MS.gene26111 | 0.83428 | 3.28E-56 | -1.69E-46 |
| MS.gene059597 | MS.gene26111 | 0.818891 | 1.55E-52 | -1.69E-46 |
| MS.gene05959 | MS.gene26111 | 0.820183 | 7.85E-53 | -1.69E-46 |
| MS.gene059674 | MS.gene26111 | 0.881615 | 2.07E-70 | -1.69E-46 |
| MS.gene059676 | MS.gene26111 | 0.849495 | 3.12E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene26111 | 0.869198 | 3.71E-66 | -1.69E-46 |
| MS.gene059692 | MS.gene26111 | 0.853917 | 1.74E-61 | -1.69E-46 |
| MS.gene059695 | MS.gene26111 | 0.857581 | 1.48E-62 | -1.69E-46 |
| MS.gene059711 | MS.gene26111 | 0.853635 | 2.10E-61 | -1.69E-46 |
| MS.gene059717 | MS.gene26111 | 0.81623 | 6.16E-52 | -1.69E-46 |
| MS.gene059788 | MS.gene26111 | 0.820416 | 6.94E-53 | -1.69E-46 |
| MS.gene059807 | MS.gene26111 | 0.921876 | 2.04E-88 | -1.69E-46 |
| MS.gene05984 | MS.gene26111 | 0.808643 | 2.80E-50 | -1.69E-46 |
| MS.gene060247 | MS.gene26111 | 0.815401 | 9.42E-52 | -1.69E-46 |
| MS.gene060372 | MS.gene26111 | 0.849111 | 3.99E-60 | -1.69E-46 |
| MS.gene060403 | MS.gene26111 | 0.83818 | 3.35E-57 | -1.69E-46 |
| MS.gene060495 | MS.gene26111 | 0.803053 | 4.19E-49 | -1.69E-46 |
| MS.gene060496 | MS.gene26111 | 0.801819 | 7.52E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene26111 | 0.832235 | 1.06E-55 | -1.69E-46 |
| MS.gene060818 | MS.gene26111 | 0.8262 | 3.09E-54 | -1.69E-46 |
| MS.gene060835 | MS.gene26111 | 0.847002 | 1.52E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene26111 | 0.883344 | 4.86E-71 | -1.69E-46 |
| MS.gene06097 | MS.gene26111 | 0.840247 | 9.75E-58 | -1.69E-46 |
| MS.gene060981 | MS.gene26111 | 0.81052 | 1.11E-50 | -1.69E-46 |
| MS.gene060986 | MS.gene26111 | 0.808583 | 2.88E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene26111 | 0.855296 | 6.94E-62 | -1.69E-46 |
| MS.gene061049 | MS.gene26111 | 0.805436 | 1.34E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene26111 | -0.829191 | 5.91E-55 | -1.69E-46 |
| MS.gene061154 | MS.gene26111 | 0.889173 | 3.07E-73 | -1.69E-46 |
| MS.gene061159 | MS.gene26111 | 0.807239 | 5.57E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26111.t1 | MTR_5g078290 | 98.361 | 427 | 7 | 0 | 1 | 427 | 1 | 427 | 0.0 | 858 |
| MS.gene26111.t1 | MTR_5g078290 | 98.421 | 380 | 6 | 0 | 1 | 380 | 1 | 380 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26111.t1 | AT1G66330 | 68.405 | 326 | 86 | 2 | 104 | 418 | 81 | 400 | 3.40e-135 | 394 |
| MS.gene26111.t1 | AT1G66330 | 68.405 | 326 | 86 | 2 | 104 | 418 | 81 | 400 | 3.40e-135 | 394 |
Find 92 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAAATTCTGTCCCTAAAA+AGG | 0.241678 | 5.4:+56781595 | None:intergenic |
| AGAACCACAAATTCCTTTCT+TGG | 0.277347 | 5.4:-56779316 | MS.gene26111:CDS |
| GAGAAACTTTGCATCGTTAC+AGG | 0.311814 | 5.4:+56782099 | None:intergenic |
| CCGAAACCAATCATTGAATA+AGG | 0.320915 | 5.4:+56782519 | None:intergenic |
| GAGCCCTTATCTCTGAAAAT+AGG | 0.324687 | 5.4:+56779388 | None:intergenic |
| CTGGAGTGACGGGGCCTTAG+AGG | 0.337435 | 5.4:-56781168 | MS.gene26111:intron |
| TCAAGGGTTAGACTCGAAAA+TGG | 0.338957 | 5.4:-56782580 | MS.gene26111:CDS |
| GAAGCTAAACTAACCTCTTC+AGG | 0.339327 | 5.4:+56779081 | None:intergenic |
| GAACCACAAATTCCTTTCTT+GGG | 0.342712 | 5.4:-56779315 | MS.gene26111:CDS |
| ATCTTCCATGGCACGTTGCT+TGG | 0.348175 | 5.4:+56780093 | None:intergenic |
| GTCTTGGAGATTAAACTAAC+TGG | 0.351920 | 5.4:+56782478 | None:intergenic |
| ACAGAATTTCTCAAACTTGA+TGG | 0.355828 | 5.4:-56781584 | MS.gene26111:intron |
| GATCAACCTTATTCAATGAT+TGG | 0.357803 | 5.4:-56782525 | MS.gene26111:CDS |
| ATACAGTAGCAATACGATTA+AGG | 0.363525 | 5.4:+56781341 | None:intergenic |
| CCTTATTCAATGATTGGTTT+CGG | 0.365622 | 5.4:-56782519 | MS.gene26111:CDS |
| CTTTCAGAAAATAATGTTAG+AGG | 0.367250 | 5.4:-56779364 | MS.gene26111:CDS |
| GATCGTGTTCGTTCTGTTCG+TGG | 0.367759 | 5.4:-56782145 | MS.gene26111:CDS |
| ATTTAACAGATTTACCTCTA+AGG | 0.373384 | 5.4:+56781154 | None:intergenic |
| AGTATCTATAGGAAGCTTAC+TGG | 0.373975 | 5.4:-56779152 | MS.gene26111:intron |
| GATGCTGCAGCTGCAATGGC+TGG | 0.379748 | 5.4:+56777714 | None:intergenic |
| TGATCTTCTGATGGCACTTA+CGG | 0.391058 | 5.4:-56782698 | None:intergenic |
| ATAGGAAGCTTACTGGAGTA+TGG | 0.402823 | 5.4:-56779145 | MS.gene26111:intron |
| TTTCAGTTCATATATAGCTT+TGG | 0.412176 | 5.4:+56777692 | None:intergenic |
| ATATCACCTCCAAGGACATA+AGG | 0.415173 | 5.4:+56780068 | None:intergenic |
| ATATCCACTGCAGATCTTGA+AGG | 0.418058 | 5.4:-56781231 | MS.gene26111:intron |
| AAATAGAAGAAGGGGATAGT+TGG | 0.418919 | 5.4:-56777659 | MS.gene26111:CDS |
| TTTGGATGCTGCAGCTGCAA+TGG | 0.432658 | 5.4:+56777710 | None:intergenic |
| CTCTTGGAAACGCAGGGATG+GGG | 0.434985 | 5.4:-56778204 | MS.gene26111:CDS |
| CCGATGAGCACTGGAGTGAC+GGG | 0.435635 | 5.4:-56781178 | MS.gene26111:CDS |
| AGAACGGATTACTGCTCTTC+AGG | 0.442816 | 5.4:-56779281 | MS.gene26111:intron |
| TCTGTCTCATGTAAATCAAC+AGG | 0.443072 | 5.4:-56782451 | MS.gene26111:CDS |
| GGATAGTTGGAGGTTTATGA+TGG | 0.443543 | 5.4:-56777646 | MS.gene26111:CDS |
| AACTGTATTCTGTTTATCCT+TGG | 0.449791 | 5.4:+56782604 | None:intergenic |
| ACTCTTGGAAACGCAGGGAT+GGG | 0.451755 | 5.4:-56778205 | MS.gene26111:CDS |
| CCTTACCTAGTACCGACATC+AGG | 0.452369 | 5.4:+56778895 | None:intergenic |
| CGAATCATGCTTGAAAAGAA+TGG | 0.454171 | 5.4:-56779340 | MS.gene26111:CDS |
| CTGCATAGCTCGGGCAAGAA+AGG | 0.454178 | 5.4:-56781407 | MS.gene26111:intron |
| TAGAAGAAGGGGATAGTTGG+AGG | 0.461239 | 5.4:-56777656 | MS.gene26111:CDS |
| GGAAGATGCCCTTATGTCCT+TGG | 0.463046 | 5.4:-56780077 | MS.gene26111:CDS |
| GATTGGTTTCGGTTCGTCAA+TGG | 0.464830 | 5.4:-56782508 | MS.gene26111:CDS |
| GTTCCCCTGATGTCGGTACT+AGG | 0.468688 | 5.4:-56778900 | MS.gene26111:intron |
| TTTCCAAGAGTCCACATAGA+TGG | 0.475502 | 5.4:+56778217 | None:intergenic |
| GCACCATCTATGTGGACTCT+TGG | 0.478002 | 5.4:-56778220 | MS.gene26111:CDS |
| ACATGAGACAGAAGATGTCT+TGG | 0.481154 | 5.4:+56782462 | None:intergenic |
| TATCACCTCCAAGGACATAA+GGG | 0.487860 | 5.4:+56780069 | None:intergenic |
| GACTCTTGGAAACGCAGGGA+TGG | 0.489246 | 5.4:-56778206 | MS.gene26111:CDS |
| GCCGATGAGCACTGGAGTGA+CGG | 0.489465 | 5.4:-56781179 | MS.gene26111:CDS |
| GTTGCTCTATTAGTCAAGAT+AGG | 0.494347 | 5.4:+56782655 | None:intergenic |
| ACGTTGCTTGGCACGGAAGT+CGG | 0.495141 | 5.4:+56780105 | None:intergenic |
| ATCCCCAAGAAAGGAATTTG+TGG | 0.496739 | 5.4:+56779312 | None:intergenic |
| ATGATGTTTCTGATTTAACT+AGG | 0.506246 | 5.4:-56782387 | MS.gene26111:intron |
| TGCCGTCACATCCCCAAGAA+AGG | 0.509048 | 5.4:+56779303 | None:intergenic |
| AGCAATGGGAAATAGAAGAA+GGG | 0.512568 | 5.4:-56777668 | MS.gene26111:CDS |
| ATTTCTTCAGTGGCATAATG+AGG | 0.515220 | 5.4:-56781646 | MS.gene26111:intron |
| AAGCAATGGGAAATAGAAGA+AGG | 0.516781 | 5.4:-56777669 | MS.gene26111:CDS |
| AACCACAAATTCCTTTCTTG+GGG | 0.522590 | 5.4:-56779314 | MS.gene26111:CDS |
| CCATGGCACGTTGCTTGGCA+CGG | 0.523891 | 5.4:+56780098 | None:intergenic |
| AAAGTGCTGCCGATGAGCAC+TGG | 0.524125 | 5.4:-56781187 | MS.gene26111:CDS |
| TTCCTTTCTTGGGGATGTGA+CGG | 0.526745 | 5.4:-56779305 | MS.gene26111:CDS |
| CTTCAGTGGCATAATGAGGA+TGG | 0.542595 | 5.4:-56781642 | MS.gene26111:intron |
| GGACATAAGGGCATCTTCCA+TGG | 0.546770 | 5.4:+56780081 | None:intergenic |
| CCCGTCACTCCAGTGCTCAT+CGG | 0.553203 | 5.4:+56781178 | None:intergenic |
| TCTTGGAAACGCAGGGATGG+GGG | 0.560998 | 5.4:-56778203 | MS.gene26111:CDS |
| GTTTACCGTCCATTGCATCA+AGG | 0.562296 | 5.4:+56778953 | None:intergenic |
| TCTTATAGACCTTGATGCAA+TGG | 0.567724 | 5.4:-56778962 | MS.gene26111:CDS |
| CCGTGCCAAGCAACGTGCCA+TGG | 0.568141 | 5.4:-56780098 | MS.gene26111:CDS |
| TCTGCACTTTCTGAAGCAGA+TGG | 0.572909 | 5.4:-56779120 | MS.gene26111:CDS |
| TGATTACACTGATCCTGAAG+AGG | 0.574801 | 5.4:-56779094 | MS.gene26111:intron |
| ACGAGCTTTAGCGAAGGCAC+TGG | 0.575429 | 5.4:-56778248 | MS.gene26111:CDS |
| CTTGTTGTAGAGGCTGGCCG+AGG | 0.577303 | 5.4:-56777745 | MS.gene26111:intron |
| ATGTGGACTCTTGGAAACGC+AGG | 0.578590 | 5.4:-56778211 | MS.gene26111:CDS |
| GCAATGGGAAATAGAAGAAG+GGG | 0.584212 | 5.4:-56777667 | MS.gene26111:CDS |
| CTTACCTAGTACCGACATCA+GGG | 0.585311 | 5.4:+56778896 | None:intergenic |
| CGATGAGCACTGGAGTGACG+GGG | 0.596211 | 5.4:-56781177 | MS.gene26111:CDS |
| AGTATAAAATATCACCTCCA+AGG | 0.600169 | 5.4:+56780060 | None:intergenic |
| GCTTGGCACGGAAGTCGGCA+AGG | 0.602685 | 5.4:+56780110 | None:intergenic |
| TGGCAGCAGCACCATCTATG+TGG | 0.613054 | 5.4:-56778228 | MS.gene26111:CDS |
| TGTTCTAGTTCCCCTGATGT+CGG | 0.616561 | 5.4:-56778907 | MS.gene26111:CDS |
| TCTTGCTCACCATCATGTCA+TGG | 0.617464 | 5.4:+56779929 | None:intergenic |
| TTGGGGATGTGACGGCAGAA+CGG | 0.619552 | 5.4:-56779297 | MS.gene26111:CDS |
| TGTGGACTCTTGGAAACGCA+GGG | 0.628626 | 5.4:-56778210 | MS.gene26111:CDS |
| TTCTAGACGAGCTTTAGCGA+AGG | 0.635480 | 5.4:-56778254 | MS.gene26111:intron |
| GCAACACTTTGTAGATCACA+TGG | 0.639736 | 5.4:-56782637 | MS.gene26111:CDS |
| AGATGCCCTTATGTCCTTGG+AGG | 0.646483 | 5.4:-56780074 | MS.gene26111:intron |
| ATAGACCTTGATGCAATGGA+CGG | 0.648829 | 5.4:-56778958 | MS.gene26111:CDS |
| AATGGCTGGATTGCTATCCT+CGG | 0.650744 | 5.4:+56777728 | None:intergenic |
| ACGGCAAACAAAGTTTCAAG+CGG | 0.658042 | 5.4:-56782679 | MS.gene26111:CDS |
| ACGATGCAAAGTTTCTCTCA+CGG | 0.666602 | 5.4:-56782093 | MS.gene26111:intron |
| CACATGGTTCTTCATCACCA+AGG | 0.677691 | 5.4:-56782621 | MS.gene26111:CDS |
| TTACCTAGTACCGACATCAG+GGG | 0.714696 | 5.4:+56778897 | None:intergenic |
| TATGATGGATGAAAGCACCA+AGG | 0.723092 | 5.4:-56777631 | MS.gene26111:CDS |
| GATACTGAGAAAATCGACCG+TGG | 0.757796 | 5.4:-56781385 | MS.gene26111:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGAACAAATTTATTTATT+TGG | + | chr5.4:56780323-56780342 | None:intergenic | 10.0% |
| !! | GTTTAAATAATTAAATACTA+CGG | + | chr5.4:56780705-56780724 | None:intergenic | 10.0% |
| !! | TTATTTATAATTCATATGAA+TGG | - | chr5.4:56780113-56780132 | MS.gene26111:CDS | 10.0% |
| !!! | AATATATTTCTAAAAAGATA+TGG | + | chr5.4:56778344-56778363 | None:intergenic | 10.0% |
| !! | AAAAAATAGTTACATTTCAA+TGG | + | chr5.4:56778808-56778827 | None:intergenic | 15.0% |
| !! | AGTTTGACATATAATAAAAT+TGG | + | chr5.4:56778014-56778033 | None:intergenic | 15.0% |
| !! | TATATCACATTATTTAAACA+AGG | + | chr5.4:56778756-56778775 | None:intergenic | 15.0% |
| !! | TATCAATATGAATATGAATA+GGG | - | chr5.4:56781843-56781862 | MS.gene26111:intron | 15.0% |
| !! | TTAAAACCTTATAATTGAAA+TGG | - | chr5.4:56781966-56781985 | MS.gene26111:intron | 15.0% |
| !!! | ACATTTAATTATCTAGAATA+TGG | + | chr5.4:56778567-56778586 | None:intergenic | 15.0% |
| !!! | ATTAAAAAAATCATTTCTAG+TGG | + | chr5.4:56782443-56782462 | None:intergenic | 15.0% |
| !!! | ATTTTATTATATGTCAAACT+AGG | - | chr5.4:56778014-56778033 | MS.gene26111:intron | 15.0% |
| !!! | CTTCTAAAAAAATGATTTTA+AGG | + | chr5.4:56782302-56782321 | None:intergenic | 15.0% |
| !!! | CTTTATTTCTAAAAAATATG+TGG | - | chr5.4:56781682-56781701 | MS.gene26111:intron | 15.0% |
| !!! | TCACTTTTAATCAATTTTTT+AGG | + | chr5.4:56779685-56779704 | None:intergenic | 15.0% |
| !!! | TCTTTTTAGAAATATATTGT+TGG | - | chr5.4:56778346-56778365 | MS.gene26111:intron | 15.0% |
| !! | AAAAATTGATTAAAAGTGAG+AGG | - | chr5.4:56779686-56779705 | MS.gene26111:intron | 20.0% |
| !! | AAAATTGGCAACTAAAAAAA+TGG | + | chr5.4:56777999-56778018 | None:intergenic | 20.0% |
| !! | AGTTTAAAAGTTATGTCAAA+AGG | + | chr5.4:56780156-56780175 | None:intergenic | 20.0% |
| !! | ATATTTGTGTAACAATTTGT+TGG | - | chr5.4:56779256-56779275 | MS.gene26111:intron | 20.0% |
| !! | ATGATGAAAATATGTCAATT+AGG | + | chr5.4:56781545-56781564 | None:intergenic | 20.0% |
| !! | CTAAAAAAATGGTAACAAAA+TGG | + | chr5.4:56777988-56778007 | None:intergenic | 20.0% |
| !! | CTTTCTATTAATCAAGTTTA+TGG | + | chr5.4:56780747-56780766 | None:intergenic | 20.0% |
| !! | GAAAGAATACTATTTATCAA+TGG | - | chr5.4:56779021-56779040 | MS.gene26111:intron | 20.0% |
| !! | GTATCAATATGAATATGAAT+AGG | - | chr5.4:56781842-56781861 | MS.gene26111:intron | 20.0% |
| !! | TAATTCAATATTGCATAACT+TGG | + | chr5.4:56781622-56781641 | None:intergenic | 20.0% |
| !! | TAGAAATAAAGTAATCAGTT+AGG | + | chr5.4:56781673-56781692 | None:intergenic | 20.0% |
| !! | TGTATGGGATATTAATATAA+AGG | + | chr5.4:56780061-56780080 | None:intergenic | 20.0% |
| !!! | AAAAATGATTTTAAGGAATG+CGG | + | chr5.4:56782295-56782314 | None:intergenic | 20.0% |
| !!! | ACTAAGATTTTAGTATCTAT+AGG | - | chr5.4:56781139-56781158 | MS.gene26111:intron | 20.0% |
| !!! | AGTGAAAATAGATTTTATAC+AGG | - | chr5.4:56779390-56779409 | MS.gene26111:CDS | 20.0% |
| !!! | AGTTTAAAATATGTGAGTAT+AGG | - | chr5.4:56781763-56781782 | MS.gene26111:intron | 20.0% |
| !!! | CTTAAAAATTGCTTTTATTG+TGG | + | chr5.4:56779778-56779797 | None:intergenic | 20.0% |
| !!! | TCTAGAATTTTCAATTTTTC+TGG | - | chr5.4:56778990-56779009 | MS.gene26111:intron | 20.0% |
| !!! | TTAACTAATTATTTCTTCAG+TGG | - | chr5.4:56778646-56778665 | MS.gene26111:intron | 20.0% |
| !!! | TTTTAAACTTGCTCTTTATT+TGG | + | chr5.4:56781752-56781771 | None:intergenic | 20.0% |
| ! | AATCATACTAATGAACATCA+TGG | + | chr5.4:56781495-56781514 | None:intergenic | 25.0% |
| ! | AATTTAGCAATCATGATTAG+AGG | - | chr5.4:56778465-56778484 | MS.gene26111:intron | 25.0% |
| ! | AATTTCCGATACTATATTGT+TGG | - | chr5.4:56779189-56779208 | MS.gene26111:intron | 25.0% |
| ! | ACAAAAATTAGACTCATTGA+TGG | - | chr5.4:56779884-56779903 | MS.gene26111:intron | 25.0% |
| ! | ACAGATTAAAAGGATAAACA+AGG | - | chr5.4:56779909-56779928 | MS.gene26111:intron | 25.0% |
| ! | ACTAACCAACAATATAGTAT+CGG | + | chr5.4:56779197-56779216 | None:intergenic | 25.0% |
| ! | ATATGAACTGAAAAAGCAAT+GGG | - | chr5.4:56782620-56782639 | MS.gene26111:CDS | 25.0% |
| ! | ATCTTAAAATAAGAACTCCT+AGG | - | chr5.4:56779338-56779357 | MS.gene26111:CDS | 25.0% |
| ! | ATGAATGCATAAATAGTGAT+AGG | + | chr5.4:56781272-56781291 | None:intergenic | 25.0% |
| ! | ATGATGTTCATTAGTATGAT+TGG | - | chr5.4:56781494-56781513 | MS.gene26111:intron | 25.0% |
| ! | ATTTAACAGATTTACCTCTA+AGG | + | chr5.4:56779151-56779170 | None:intergenic | 25.0% |
| ! | CTCATTATAGAAATCTGTAT+GGG | + | chr5.4:56780076-56780095 | None:intergenic | 25.0% |
| ! | CTGGAAAAGAATTCTTTAAT+CGG | - | chr5.4:56778380-56778399 | MS.gene26111:intron | 25.0% |
| ! | CTTTCAGAAAATAATGTTAG+AGG | - | chr5.4:56780938-56780957 | MS.gene26111:intron | 25.0% |
| ! | GACATGTAATATTTGAAAAC+TGG | - | chr5.4:56778067-56778086 | MS.gene26111:intron | 25.0% |
| ! | GATTGTATAGTGGTTATTAA+AGG | + | chr5.4:56778411-56778430 | None:intergenic | 25.0% |
| ! | GTTAGCATATAATTAGAATC+AGG | + | chr5.4:56778247-56778266 | None:intergenic | 25.0% |
| ! | TATATGAACTGAAAAAGCAA+TGG | - | chr5.4:56782619-56782638 | MS.gene26111:CDS | 25.0% |
| ! | TCATGATATATATGAACGTA+TGG | + | chr5.4:56781797-56781816 | None:intergenic | 25.0% |
| ! | TCCATTCAAAAAGAAAACTA+TGG | + | chr5.4:56780567-56780586 | None:intergenic | 25.0% |
| ! | TCTCATTATAGAAATCTGTA+TGG | + | chr5.4:56780077-56780096 | None:intergenic | 25.0% |
| ! | TGATTAGAGGAGTTATAATA+TGG | - | chr5.4:56778478-56778497 | MS.gene26111:intron | 25.0% |
| ! | TTAATATTTACTCATTCACC+CGG | - | chr5.4:56780604-56780623 | MS.gene26111:intron | 25.0% |
| ! | TTGAGTAATTGATTGTATAG+TGG | + | chr5.4:56778421-56778440 | None:intergenic | 25.0% |
| ! | TTTCAGTTCATATATAGCTT+TGG | + | chr5.4:56782613-56782632 | None:intergenic | 25.0% |
| !! | AAACAGAATACAGTTTTCAA+GGG | - | chr5.4:56777706-56777725 | MS.gene26111:CDS | 25.0% |
| !! | ACCATAGTTTTCTTTTTGAA+TGG | - | chr5.4:56780563-56780582 | MS.gene26111:intron | 25.0% |
| !! | ATGATGTTTCTGATTTAACT+AGG | - | chr5.4:56777915-56777934 | MS.gene26111:intron | 25.0% |
| !! | ATTTTCATCATTCTTTGACA+AGG | - | chr5.4:56781554-56781573 | MS.gene26111:intron | 25.0% |
| !! | TAAACAGAATACAGTTTTCA+AGG | - | chr5.4:56777705-56777724 | MS.gene26111:CDS | 25.0% |
| !! | TATCTTTCTTCTTATCGTTT+TGG | - | chr5.4:56778040-56778059 | MS.gene26111:intron | 25.0% |
| !! | TTCTTTTCCATTTTCTTTTC+AGG | - | chr5.4:56781050-56781069 | MS.gene26111:intron | 25.0% |
| !!! | AACAGAGACAACATTTTTTT+TGG | + | chr5.4:56778293-56778312 | None:intergenic | 25.0% |
| AAAAACCAATTTACAAGGTG+AGG | + | chr5.4:56779503-56779522 | None:intergenic | 30.0% | |
| AAAACCAATTTACAAGGTGA+GGG | + | chr5.4:56779502-56779521 | None:intergenic | 30.0% | |
| AAATATGAAAAACGCAGACA+AGG | + | chr5.4:56780846-56780865 | None:intergenic | 30.0% | |
| AACAATTATTTCCACACATG+AGG | + | chr5.4:56778628-56778647 | None:intergenic | 30.0% | |
| AACAGAACCTGAAAAGAAAA+TGG | + | chr5.4:56781060-56781079 | None:intergenic | 30.0% | |
| AACTGTATTCTGTTTATCCT+TGG | + | chr5.4:56777701-56777720 | None:intergenic | 30.0% | |
| AATAGTACAAACTCATATCG+CGG | + | chr5.4:56781522-56781541 | None:intergenic | 30.0% | |
| ACAGAATTTCTCAAACTTGA+TGG | - | chr5.4:56778718-56778737 | MS.gene26111:intron | 30.0% | |
| AGCTAGCCATTTCAATTATA+AGG | + | chr5.4:56781975-56781994 | None:intergenic | 30.0% | |
| AGTATAAAATATCACCTCCA+AGG | + | chr5.4:56780245-56780264 | None:intergenic | 30.0% | |
| ATACAGTAGCAATACGATTA+AGG | + | chr5.4:56778964-56778983 | None:intergenic | 30.0% | |
| ATGACATTATCAGTGTAAAC+AGG | + | chr5.4:56779849-56779868 | None:intergenic | 30.0% | |
| ATGTTTCATTCGATGTTTGT+TGG | - | chr5.4:56780456-56780475 | MS.gene26111:intron | 30.0% | |
| ATTGTTGGAGATATATGAAC+TGG | - | chr5.4:56778361-56778380 | MS.gene26111:intron | 30.0% | |
| CAATATTATATCCTCATGTG+TGG | - | chr5.4:56778614-56778633 | MS.gene26111:intron | 30.0% | |
| CCTACAAAAACCAATTTACA+AGG | + | chr5.4:56779508-56779527 | None:intergenic | 30.0% | |
| CTGAAAGATCTTAACATCAA+AGG | + | chr5.4:56781435-56781454 | None:intergenic | 30.0% | |
| CTTTGATGTTAAGATCTTTC+AGG | - | chr5.4:56781433-56781452 | MS.gene26111:intron | 30.0% | |
| GATCAACCTTATTCAATGAT+TGG | - | chr5.4:56777777-56777796 | MS.gene26111:intron | 30.0% | |
| GTCGATCATAAAACTTTATC+AGG | + | chr5.4:56781246-56781265 | None:intergenic | 30.0% | |
| TAACATTCATAGAGATCACT+TGG | - | chr5.4:56781715-56781734 | MS.gene26111:intron | 30.0% | |
| TAATATTTACTCATTCACCC+GGG | - | chr5.4:56780605-56780624 | MS.gene26111:intron | 30.0% | |
| TAATGAACATCATGGCATAT+AGG | + | chr5.4:56781487-56781506 | None:intergenic | 30.0% | |
| TCCTGATTCATACTGAATTA+GGG | + | chr5.4:56781100-56781119 | None:intergenic | 30.0% | |
| TGAATCATTTGGATGTGATA+TGG | - | chr5.4:56779659-56779678 | MS.gene26111:intron | 30.0% | |
| TGAGATGATAATATGCTAGA+TGG | + | chr5.4:56781893-56781912 | None:intergenic | 30.0% | |
| TTCCTGATTCATACTGAATT+AGG | + | chr5.4:56781101-56781120 | None:intergenic | 30.0% | |
| TTGATACCATCTTGGAATAT+AGG | + | chr5.4:56779547-56779566 | None:intergenic | 30.0% | |
| ! | AAATGTAAGTTGACCATGTA+AGG | + | chr5.4:56778864-56778883 | None:intergenic | 30.0% |
| ! | AATGTAAGTTGACCATGTAA+GGG | + | chr5.4:56778863-56778882 | None:intergenic | 30.0% |
| ! | AGTCCTATTTTCAGAGATAA+GGG | - | chr5.4:56780911-56780930 | MS.gene26111:intron | 30.0% |
| ! | AGTTTAAAGAGAGAGTACAA+AGG | + | chr5.4:56781947-56781966 | None:intergenic | 30.0% |
| ! | ATTGATGGACACAGATTAAA+AGG | - | chr5.4:56779899-56779918 | MS.gene26111:intron | 30.0% |
| ! | CTCATAGTGTATTGATAAGA+AGG | - | chr5.4:56780485-56780504 | MS.gene26111:intron | 30.0% |
| ! | GACATAACTTTTAAACTGTC+AGG | - | chr5.4:56780159-56780178 | MS.gene26111:intron | 30.0% |
| ! | GTCTAATGTTTGAAGTGATA+TGG | - | chr5.4:56779446-56779465 | MS.gene26111:intron | 30.0% |
| ! | TATAATTAGAATCAGGTTGC+TGG | + | chr5.4:56778240-56778259 | None:intergenic | 30.0% |
| !! | AAAAGGAGTCTTGTATTTTC+TGG | + | chr5.4:56780139-56780158 | None:intergenic | 30.0% |
| !! | AATGAGAGATAAGAAGTGTT+TGG | - | chr5.4:56780090-56780109 | MS.gene26111:CDS | 30.0% |
| !! | ACGATCATTTTTCTCATCTT+CGG | + | chr5.4:56778143-56778162 | None:intergenic | 30.0% |
| !! | CCTTATTCAATGATTGGTTT+CGG | - | chr5.4:56777783-56777802 | MS.gene26111:intron | 30.0% |
| !! | CTGAAAAGGTGTTTATAAGA+GGG | - | chr5.4:56779470-56779489 | MS.gene26111:intron | 30.0% |
| !!! | AGAGACAACATTTTTTTTGG+TGG | + | chr5.4:56778290-56778309 | None:intergenic | 30.0% |
| !!! | CCTTGTAAATTGGTTTTTGT+AGG | - | chr5.4:56779505-56779524 | MS.gene26111:intron | 30.0% |
| AAACGTGTCAACTTTGCTAA+AGG | + | chr5.4:56782533-56782552 | None:intergenic | 35.0% | |
| AAATAGAAGAAGGGGATAGT+TGG | - | chr5.4:56782643-56782662 | MS.gene26111:CDS | 35.0% | |
| AACCACAAATTCCTTTCTTG+GGG | - | chr5.4:56780988-56781007 | MS.gene26111:intron | 35.0% | |
| AACCTACAAAACAGGTTTGT+AGG | + | chr5.4:56779722-56779741 | None:intergenic | 35.0% | |
| AACGTGTCAACTTTGCTAAA+GGG | + | chr5.4:56782532-56782551 | None:intergenic | 35.0% | |
| AAGCAATGGGAAATAGAAGA+AGG | - | chr5.4:56782633-56782652 | MS.gene26111:CDS | 35.0% | |
| ACATCCAAATGATTCACTGT+GGG | + | chr5.4:56779655-56779674 | None:intergenic | 35.0% | |
| ACCTACAAAACAGGTTTGTA+GGG | + | chr5.4:56779721-56779740 | None:intergenic | 35.0% | |
| ACGATATTAGAACTTGGGTT+TGG | + | chr5.4:56779754-56779773 | None:intergenic | 35.0% | |
| AGAACCACAAATTCCTTTCT+TGG | - | chr5.4:56780986-56781005 | MS.gene26111:intron | 35.0% | |
| AGCAACTCTGTAATTAAGTG+TGG | + | chr5.4:56780018-56780037 | None:intergenic | 35.0% | |
| AGCAATGGGAAATAGAAGAA+GGG | - | chr5.4:56782634-56782653 | MS.gene26111:CDS | 35.0% | |
| AGTATCTATAGGAAGCTTAC+TGG | - | chr5.4:56781150-56781169 | MS.gene26111:intron | 35.0% | |
| ATATCCCTCACCTTGTAAAT+TGG | - | chr5.4:56779495-56779514 | MS.gene26111:intron | 35.0% | |
| ATTTCTTCAGTGGCATAATG+AGG | - | chr5.4:56778656-56778675 | MS.gene26111:intron | 35.0% | |
| CAAAAACATCCATGACATGA+TGG | - | chr5.4:56780364-56780383 | MS.gene26111:intron | 35.0% | |
| CACTGTAGTTGTCTAATACT+TGG | - | chr5.4:56779615-56779634 | MS.gene26111:intron | 35.0% | |
| CATTGTCAGAAAAGCAAACT+CGG | + | chr5.4:56780882-56780901 | None:intergenic | 35.0% | |
| CCGAAACCAATCATTGAATA+AGG | + | chr5.4:56777786-56777805 | None:intergenic | 35.0% | |
| CCTGATTCATACTGAATTAG+GGG | + | chr5.4:56781099-56781118 | None:intergenic | 35.0% | |
| CGAATCATGCTTGAAAAGAA+TGG | - | chr5.4:56780962-56780981 | MS.gene26111:intron | 35.0% | |
| GAACCACAAATTCCTTTCTT+GGG | - | chr5.4:56780987-56781006 | MS.gene26111:intron | 35.0% | |
| GAGAAATTCTGTCCCTAAAA+AGG | + | chr5.4:56778710-56778729 | None:intergenic | 35.0% | |
| GTCAAAACATTCTCAAATGC+AGG | - | chr5.4:56781576-56781595 | MS.gene26111:intron | 35.0% | |
| GTCTTGGAGATTAAACTAAC+TGG | + | chr5.4:56777827-56777846 | None:intergenic | 35.0% | |
| GTGGTACGATATTAGAACTT+GGG | + | chr5.4:56779759-56779778 | None:intergenic | 35.0% | |
| GTTGCTCTATTAGTCAAGAT+AGG | + | chr5.4:56777650-56777669 | None:intergenic | 35.0% | |
| TAAATACTACGGTCCAGTTT+GGG | + | chr5.4:56780694-56780713 | None:intergenic | 35.0% | |
| TATGCTAACAGTATTGTTGC+TGG | - | chr5.4:56778258-56778277 | MS.gene26111:intron | 35.0% | |
| TCTGTCTCATGTAAATCAAC+AGG | - | chr5.4:56777851-56777870 | MS.gene26111:intron | 35.0% | |
| TCTTATAGACCTTGATGCAA+TGG | - | chr5.4:56781340-56781359 | MS.gene26111:intron | 35.0% | |
| TGTGGTACGATATTAGAACT+TGG | + | chr5.4:56779760-56779779 | None:intergenic | 35.0% | |
| TTAAATACTACGGTCCAGTT+TGG | + | chr5.4:56780695-56780714 | None:intergenic | 35.0% | |
| TTTAGCAAAGTTGACACGTT+TGG | - | chr5.4:56782532-56782551 | MS.gene26111:CDS | 35.0% | |
| ! | AAACTTGCTCTTTATTTGGC+AGG | + | chr5.4:56781748-56781767 | None:intergenic | 35.0% |
| ! | AAAGGATAAACAAGGTGTTC+TGG | - | chr5.4:56779917-56779936 | MS.gene26111:intron | 35.0% |
| ! | ATGTAAGTTGACCATGTAAG+GGG | + | chr5.4:56778862-56778881 | None:intergenic | 35.0% |
| ! | CAGTCCTATTTTCAGAGATA+AGG | - | chr5.4:56780910-56780929 | MS.gene26111:intron | 35.0% |
| ! | CCTCTTATAAACACCTTTTC+AGG | + | chr5.4:56779472-56779491 | None:intergenic | 35.0% |
| ! | GATAAGCTTTGATACCATCT+TGG | + | chr5.4:56779555-56779574 | None:intergenic | 35.0% |
| ! | TCAGGTTTCATTTTCTTCCT+TGG | + | chr5.4:56782691-56782710 | None:intergenic | 35.0% |
| !! | CCTGAAAAGGTGTTTATAAG+AGG | - | chr5.4:56779469-56779488 | MS.gene26111:intron | 35.0% |
| !! | GGTTTTTGTAGGTTTGAGTT+AGG | - | chr5.4:56779516-56779535 | MS.gene26111:intron | 35.0% |
| !! | TAGCTTTTTCTTTGACACCA+CGG | + | chr5.4:56778937-56778956 | None:intergenic | 35.0% |
| !! | TTGCTTTTCTGACAATGTTG+TGG | - | chr5.4:56780885-56780904 | MS.gene26111:intron | 35.0% |
| AAATACTACGGTCCAGTTTG+GGG | + | chr5.4:56780693-56780712 | None:intergenic | 40.0% | |
| ACATGAGACAGAAGATGTCT+TGG | + | chr5.4:56777843-56777862 | None:intergenic | 40.0% | |
| ACGATGCAAAGTTTCTCTCA+CGG | - | chr5.4:56778209-56778228 | MS.gene26111:CDS | 40.0% | |
| ACGGCAAACAAAGTTTCAAG+CGG | - | chr5.4:56777623-56777642 | MS.gene26111:CDS | 40.0% | |
| ACTGCCACATTAATCTGCAA+TGG | + | chr5.4:56779373-56779392 | None:intergenic | 40.0% | |
| AGCCAATTGTGTCTACATCT+CGG | + | chr5.4:56780791-56780810 | None:intergenic | 40.0% | |
| ATAGACCTTGATGCAATGGA+CGG | - | chr5.4:56781344-56781363 | MS.gene26111:intron | 40.0% | |
| ATAGGAAGCTTACTGGAGTA+TGG | - | chr5.4:56781157-56781176 | MS.gene26111:intron | 40.0% | |
| ATATCACCTCCAAGGACATA+AGG | + | chr5.4:56780237-56780256 | None:intergenic | 40.0% | |
| ATATCCACTGCAGATCTTGA+AGG | - | chr5.4:56779071-56779090 | MS.gene26111:intron | 40.0% | |
| ATATCCTTCAAGATCTGCAG+TGG | + | chr5.4:56779078-56779097 | None:intergenic | 40.0% | |
| ATATGGCAGATGAACAGTAG+TGG | + | chr5.4:56778327-56778346 | None:intergenic | 40.0% | |
| ATCATGGCATATAGGTGCAT+TGG | + | chr5.4:56781479-56781498 | None:intergenic | 40.0% | |
| ATCCCCAAGAAAGGAATTTG+TGG | + | chr5.4:56780993-56781012 | None:intergenic | 40.0% | |
| ATGTCTCCTGTACATGTGAA+AGG | + | chr5.4:56778119-56778138 | None:intergenic | 40.0% | |
| CACATCCAAATGATTCACTG+TGG | + | chr5.4:56779656-56779675 | None:intergenic | 40.0% | |
| CCAACTCAAACCTACAAAAC+AGG | + | chr5.4:56779730-56779749 | None:intergenic | 40.0% | |
| CCCCTAATTCAGTATGAATC+AGG | - | chr5.4:56781096-56781115 | MS.gene26111:intron | 40.0% | |
| CGGACAAGGAAAATAAGCAA+AGG | + | chr5.4:56782017-56782036 | None:intergenic | 40.0% | |
| CGTCTAGAAGTTTACATGCA+CGG | + | chr5.4:56782037-56782056 | None:intergenic | 40.0% | |
| GAAGCTAAACTAACCTCTTC+AGG | + | chr5.4:56781224-56781243 | None:intergenic | 40.0% | |
| GAGAAACTTTGCATCGTTAC+AGG | + | chr5.4:56778206-56778225 | None:intergenic | 40.0% | |
| GCAACACTTTGTAGATCACA+TGG | - | chr5.4:56777665-56777684 | MS.gene26111:CDS | 40.0% | |
| GCAATGGGAAATAGAAGAAG+GGG | - | chr5.4:56782635-56782654 | MS.gene26111:CDS | 40.0% | |
| GCTGAACCTATATTCCAAGA+TGG | - | chr5.4:56779538-56779557 | MS.gene26111:intron | 40.0% | |
| GGATAGTTGGAGGTTTATGA+TGG | - | chr5.4:56782656-56782675 | MS.gene26111:CDS | 40.0% | |
| TACACTACATTCCCCTTACA+TGG | - | chr5.4:56778848-56778867 | MS.gene26111:intron | 40.0% | |
| TATCACCTCCAAGGACATAA+GGG | + | chr5.4:56780236-56780255 | None:intergenic | 40.0% | |
| TCAAGGGTTAGACTCGAAAA+TGG | - | chr5.4:56777722-56777741 | MS.gene26111:CDS | 40.0% | |
| TCCCTAAAAAGGCAACATCT+TGG | + | chr5.4:56778699-56778718 | None:intergenic | 40.0% | |
| TCCTCCATTGCAGATTAATG+TGG | - | chr5.4:56779366-56779385 | MS.gene26111:CDS | 40.0% | |
| TGAAAAACGCAGACAAGGAA+AGG | + | chr5.4:56780841-56780860 | None:intergenic | 40.0% | |
| TGAAGTGATATGGCCTGAAA+AGG | - | chr5.4:56779456-56779475 | MS.gene26111:intron | 40.0% | |
| TGATTACACTGATCCTGAAG+AGG | - | chr5.4:56781208-56781227 | MS.gene26111:CDS | 40.0% | |
| TGTCTCCTGTACATGTGAAA+GGG | + | chr5.4:56778118-56778137 | None:intergenic | 40.0% | |
| TTCCGAGATGTAGACACAAT+TGG | - | chr5.4:56780786-56780805 | MS.gene26111:intron | 40.0% | |
| TTTCCAAGAGTCCACATAGA+TGG | + | chr5.4:56782088-56782107 | None:intergenic | 40.0% | |
| ! | ACCCTACAAACCTGTTTTGT+AGG | - | chr5.4:56779717-56779736 | MS.gene26111:intron | 40.0% |
| ! | ACTCGAGCTGACTTAAACAT+TGG | - | chr5.4:56778507-56778526 | MS.gene26111:intron | 40.0% |
| ! | CCTGTTTTGTAGGTTTGAGT+TGG | - | chr5.4:56779727-56779746 | MS.gene26111:intron | 40.0% |
| ! | GAGCCCTTATCTCTGAAAAT+AGG | + | chr5.4:56780917-56780936 | None:intergenic | 40.0% |
| ! | GCCAAGATGTTGCCTTTTTA+GGG | - | chr5.4:56778695-56778714 | MS.gene26111:intron | 40.0% |
| !! | ACGTTTGGTTCTTGTTGTAG+AGG | - | chr5.4:56782547-56782566 | MS.gene26111:CDS | 40.0% |
| !! | TATGATGGATGAAAGCACCA+AGG | - | chr5.4:56782671-56782690 | MS.gene26111:CDS | 40.0% |
| AATACTACGGTCCAGTTTGG+GGG | + | chr5.4:56780692-56780711 | None:intergenic | 45.0% | |
| AATGGCTGGATTGCTATCCT+CGG | + | chr5.4:56782577-56782596 | None:intergenic | 45.0% | |
| AGAGACCCTTTCACATGTAC+AGG | - | chr5.4:56778110-56778129 | MS.gene26111:intron | 45.0% | |
| CACATGGTTCTTCATCACCA+AGG | - | chr5.4:56777681-56777700 | MS.gene26111:CDS | 45.0% | |
| CCAGGGGTAATCTTGTAAAC+TGG | - | chr5.4:56780540-56780559 | MS.gene26111:intron | 45.0% | |
| CCAGTTTACAAGATTACCCC+TGG | + | chr5.4:56780543-56780562 | None:intergenic | 45.0% | |
| CTACATCTCGGAATTCAGAG+CGG | + | chr5.4:56780779-56780798 | None:intergenic | 45.0% | |
| CTCTACTATGCTGCATAGCT+CGG | - | chr5.4:56778885-56778904 | MS.gene26111:intron | 45.0% | |
| CTTCAGTGGCATAATGAGGA+TGG | - | chr5.4:56778660-56778679 | MS.gene26111:intron | 45.0% | |
| GAAGTTTACATGCACGGACA+AGG | + | chr5.4:56782031-56782050 | None:intergenic | 45.0% | |
| GAGGTCTTGAATTCAAACCC+GGG | + | chr5.4:56780625-56780644 | None:intergenic | 45.0% | |
| GAGTCCCACAGTGAATCATT+TGG | - | chr5.4:56779648-56779667 | MS.gene26111:intron | 45.0% | |
| GATACTGAGAAAATCGACCG+TGG | - | chr5.4:56778917-56778936 | MS.gene26111:CDS | 45.0% | |
| GCCACATTAATCTGCAATGG+AGG | + | chr5.4:56779370-56779389 | None:intergenic | 45.0% | |
| GGAGGTCTTGAATTCAAACC+CGG | + | chr5.4:56780626-56780645 | None:intergenic | 45.0% | |
| GTGTGGCATGACATCTTGTT+GGG | - | chr5.4:56779972-56779991 | MS.gene26111:intron | 45.0% | |
| GTTTACCGTCCATTGCATCA+AGG | + | chr5.4:56781352-56781371 | None:intergenic | 45.0% | |
| TACTTCGCATGCGTTCACTT+AGG | - | chr5.4:56780261-56780280 | MS.gene26111:intron | 45.0% | |
| TAGAAGAAGGGGATAGTTGG+AGG | - | chr5.4:56782646-56782665 | MS.gene26111:CDS | 45.0% | |
| TCTACTATGCTGCATAGCTC+GGG | - | chr5.4:56778886-56778905 | MS.gene26111:intron | 45.0% | |
| TCTTGCTCACCATCATGTCA+TGG | + | chr5.4:56780376-56780395 | None:intergenic | 45.0% | |
| TGCAATGGAGGAGAAAACCT+AGG | + | chr5.4:56779358-56779377 | None:intergenic | 45.0% | |
| TTCCTTTCTTGGGGATGTGA+CGG | - | chr5.4:56780997-56781016 | MS.gene26111:intron | 45.0% | |
| ! | AGGTGTTCTGGTAATGAGCA+TGG | - | chr5.4:56779929-56779948 | MS.gene26111:CDS | 45.0% |
| ! | ATCCGTGAGCCACTCATTTT+CGG | - | chr5.4:56779579-56779598 | MS.gene26111:intron | 45.0% |
| ! | ATCGGCAGCACTTTTCAATC+TGG | + | chr5.4:56779109-56779128 | None:intergenic | 45.0% |
| ! | CGCCAAGATGTTGCCTTTTT+AGG | - | chr5.4:56778694-56778713 | MS.gene26111:intron | 45.0% |
| ! | GGTGTTCTGGTAATGAGCAT+GGG | - | chr5.4:56779930-56779949 | MS.gene26111:CDS | 45.0% |
| ! | GTATTGATAAGAAGGCTGCG+TGG | - | chr5.4:56780493-56780512 | MS.gene26111:intron | 45.0% |
| ! | TTCTAGACGAGCTTTAGCGA+AGG | - | chr5.4:56782048-56782067 | MS.gene26111:intron | 45.0% |
| ! | TTCTGGTAATGAGCATGGGT+TGG | - | chr5.4:56779934-56779953 | MS.gene26111:CDS | 45.0% |
| ! | TTGGTTCTTGTTGTAGAGGC+TGG | - | chr5.4:56782551-56782570 | MS.gene26111:CDS | 45.0% |
| !! | AGAACGGATTACTGCTCTTC+AGG | - | chr5.4:56781021-56781040 | MS.gene26111:intron | 45.0% |
| !! | CTTACCTAGTACCGACATCA+GGG | + | chr5.4:56781409-56781428 | None:intergenic | 45.0% |
| !! | GATTGGTTTCGGTTCGTCAA+TGG | - | chr5.4:56777794-56777813 | MS.gene26111:intron | 45.0% |
| !! | TCTGCACTTTCTGAAGCAGA+TGG | - | chr5.4:56781182-56781201 | MS.gene26111:CDS | 45.0% |
| !! | TGTTCTAGTTCCCCTGATGT+CGG | - | chr5.4:56781395-56781414 | MS.gene26111:CDS | 45.0% |
| !! | TTACCTAGTACCGACATCAG+GGG | + | chr5.4:56781408-56781427 | None:intergenic | 45.0% |
| !!! | TTGTTTTTATAAAAAAAAAA+AGG | + | chr5.4:56780289-56780308 | None:intergenic | 5.0% |
| ACTCTTGGAAACGCAGGGAT+GGG | - | chr5.4:56782097-56782116 | MS.gene26111:CDS | 50.0% | |
| AGATGCCCTTATGTCCTTGG+AGG | - | chr5.4:56780228-56780247 | MS.gene26111:intron | 50.0% | |
| ATACTACGGTCCAGTTTGGG+GGG | + | chr5.4:56780691-56780710 | None:intergenic | 50.0% | |
| ATCTTCCATGGCACGTTGCT+TGG | + | chr5.4:56780212-56780231 | None:intergenic | 50.0% | |
| ATGTGGACTCTTGGAAACGC+AGG | - | chr5.4:56782091-56782110 | MS.gene26111:intron | 50.0% | |
| CCTCCAACTCCTTTAACCCT+CGG | - | chr5.4:56780641-56780660 | MS.gene26111:intron | 50.0% | |
| CCTGATGTCGGTACTAGGTA+AGG | - | chr5.4:56781407-56781426 | MS.gene26111:intron | 50.0% | |
| GATCGTGTTCGTTCTGTTCG+TGG | - | chr5.4:56778157-56778176 | MS.gene26111:intron | 50.0% | |
| GCACCATCTATGTGGACTCT+TGG | - | chr5.4:56782082-56782101 | MS.gene26111:intron | 50.0% | |
| GGAAGATGCCCTTATGTCCT+TGG | - | chr5.4:56780225-56780244 | MS.gene26111:intron | 50.0% | |
| GGTGTGGCATGACATCTTGT+TGG | - | chr5.4:56779971-56779990 | MS.gene26111:intron | 50.0% | |
| GTCCGAAAATGAGTGGCTCA+CGG | + | chr5.4:56779584-56779603 | None:intergenic | 50.0% | |
| TGATAAGAAGGCTGCGTGGA+GGG | - | chr5.4:56780497-56780516 | MS.gene26111:intron | 50.0% | |
| TGGTTTGAGCCGAGGGTTAA+AGG | + | chr5.4:56780653-56780672 | None:intergenic | 50.0% | |
| TGTGGACTCTTGGAAACGCA+GGG | - | chr5.4:56782092-56782111 | MS.gene26111:intron | 50.0% | |
| TTGATAAGAAGGCTGCGTGG+AGG | - | chr5.4:56780496-56780515 | MS.gene26111:intron | 50.0% | |
| TTTGGATGCTGCAGCTGCAA+TGG | + | chr5.4:56782595-56782614 | None:intergenic | 50.0% | |
| ! | CACTCATTTTCGGACCACTC+GGG | - | chr5.4:56779589-56779608 | MS.gene26111:intron | 50.0% |
| ! | CCACTCATTTTCGGACCACT+CGG | - | chr5.4:56779588-56779607 | MS.gene26111:intron | 50.0% |
| !! | AACTCAACTGGTTTGAGCCG+AGG | + | chr5.4:56780661-56780680 | None:intergenic | 50.0% |
| !! | ACTCAACTGGTTTGAGCCGA+GGG | + | chr5.4:56780660-56780679 | None:intergenic | 50.0% |
| !! | CCTTACCTAGTACCGACATC+AGG | + | chr5.4:56781410-56781429 | None:intergenic | 50.0% |
| !! | GGACATAAGGGCATCTTCCA+TGG | + | chr5.4:56780224-56780243 | None:intergenic | 50.0% |
| !! | GGGTTGGTGTTGTCACACAT+GGG | - | chr5.4:56779950-56779969 | MS.gene26111:intron | 50.0% |
| !! | TGGGTTGGTGTTGTCACACA+TGG | - | chr5.4:56779949-56779968 | MS.gene26111:intron | 50.0% |
| ACGTTGCTTGGCACGGAAGT+CGG | + | chr5.4:56780200-56780219 | None:intergenic | 55.0% | |
| ATTACCCCTGGACCGTACCA+CGG | + | chr5.4:56780531-56780550 | None:intergenic | 55.0% | |
| CAACTACAGTGTGACCCGAG+TGG | + | chr5.4:56779606-56779625 | None:intergenic | 55.0% | |
| CCGAGGGTTAAAGGAGTTGG+AGG | + | chr5.4:56780644-56780663 | None:intergenic | 55.0% | |
| CCGAGTGGTCCGAAAATGAG+TGG | + | chr5.4:56779591-56779610 | None:intergenic | 55.0% | |
| CTCTTGGAAACGCAGGGATG+GGG | - | chr5.4:56782098-56782117 | MS.gene26111:CDS | 55.0% | |
| CTGCATAGCTCGGGCAAGAA+AGG | - | chr5.4:56778895-56778914 | MS.gene26111:intron | 55.0% | |
| GACTCTTGGAAACGCAGGGA+TGG | - | chr5.4:56782096-56782115 | MS.gene26111:CDS | 55.0% | |
| GAGCCGAGGGTTAAAGGAGT+TGG | + | chr5.4:56780647-56780666 | None:intergenic | 55.0% | |
| GTTCCCCTGATGTCGGTACT+AGG | - | chr5.4:56781402-56781421 | MS.gene26111:CDS | 55.0% | |
| TACTACGGTCCAGTTTGGGG+GGG | + | chr5.4:56780690-56780709 | None:intergenic | 55.0% | |
| TCTTGGAAACGCAGGGATGG+GGG | - | chr5.4:56782099-56782118 | MS.gene26111:CDS | 55.0% | |
| TGCCGTCACATCCCCAAGAA+AGG | + | chr5.4:56781002-56781021 | None:intergenic | 55.0% | |
| TGGCAGCAGCACCATCTATG+TGG | - | chr5.4:56782074-56782093 | MS.gene26111:intron | 55.0% | |
| TTGGGGATGTGACGGCAGAA+CGG | - | chr5.4:56781005-56781024 | MS.gene26111:intron | 55.0% | |
| ! | ACGAGCTTTAGCGAAGGCAC+TGG | - | chr5.4:56782054-56782073 | MS.gene26111:intron | 55.0% |
| ! | GGTGTTGTCACACATGGGTG+TGG | - | chr5.4:56779955-56779974 | MS.gene26111:intron | 55.0% |
| !! | AAAGTGCTGCCGATGAGCAC+TGG | - | chr5.4:56779115-56779134 | MS.gene26111:CDS | 55.0% |
| CCATGGCACGTTGCTTGGCA+CGG | + | chr5.4:56780207-56780226 | None:intergenic | 60.0% | |
| CCCGTCACTCCAGTGCTCAT+CGG | + | chr5.4:56779127-56779146 | None:intergenic | 60.0% | |
| GATGCTGCAGCTGCAATGGC+TGG | + | chr5.4:56782591-56782610 | None:intergenic | 60.0% | |
| GGGGGGTTGGGTAACTCAAC+TGG | + | chr5.4:56780673-56780692 | None:intergenic | 60.0% | |
| GTTACCCAACCCCCCCAAAC+TGG | - | chr5.4:56780678-56780697 | MS.gene26111:intron | 60.0% | |
| TTACCCCTGGACCGTACCAC+GGG | + | chr5.4:56780530-56780549 | None:intergenic | 60.0% | |
| ! | CTTGTTGTAGAGGCTGGCCG+AGG | - | chr5.4:56782557-56782576 | MS.gene26111:CDS | 60.0% |
| !! | CCGATGAGCACTGGAGTGAC+GGG | - | chr5.4:56779124-56779143 | MS.gene26111:CDS | 60.0% |
| !! | CGATGAGCACTGGAGTGACG+GGG | - | chr5.4:56779125-56779144 | MS.gene26111:CDS | 60.0% |
| !! | GCCGATGAGCACTGGAGTGA+CGG | - | chr5.4:56779123-56779142 | MS.gene26111:CDS | 60.0% |
| ACGGTCCAGTTTGGGGGGGT+TGG | + | chr5.4:56780686-56780705 | None:intergenic | 65.0% | |
| AGGGTGAAGCCCCCGTGGTA+CGG | - | chr5.4:56780516-56780535 | MS.gene26111:intron | 65.0% | |
| CCGTGCCAAGCAACGTGCCA+TGG | - | chr5.4:56780204-56780223 | MS.gene26111:intron | 65.0% | |
| CGGTCCAGTTTGGGGGGGTT+GGG | + | chr5.4:56780685-56780704 | None:intergenic | 65.0% | |
| GCTTGGCACGGAAGTCGGCA+AGG | + | chr5.4:56780195-56780214 | None:intergenic | 65.0% | |
| TACCCCTGGACCGTACCACG+GGG | + | chr5.4:56780529-56780548 | None:intergenic | 65.0% | |
| ! | CTGGAGTGACGGGGCCTTAG+AGG | - | chr5.4:56779134-56779153 | MS.gene26111:CDS | 65.0% |
| !! | CGCAGGGATGGGGGCATTAC+AGG | - | chr5.4:56782108-56782127 | MS.gene26111:CDS | 65.0% |
| AAGCCCCCGTGGTACGGTCC+AGG | - | chr5.4:56780522-56780541 | MS.gene26111:intron | 70.0% | |
| ACCCCTGGACCGTACCACGG+GGG | + | chr5.4:56780528-56780547 | None:intergenic | 70.0% | |
| AGCCCCCGTGGTACGGTCCA+GGG | - | chr5.4:56780523-56780542 | MS.gene26111:intron | 70.0% | |
| CGTGGAGGGTGAAGCCCCCG+TGG | - | chr5.4:56780511-56780530 | MS.gene26111:intron | 75.0% | |
| GCCCCCGTGGTACGGTCCAG+GGG | - | chr5.4:56780524-56780543 | MS.gene26111:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 56777614 | 56782710 | 56777614 | ID=MS.gene26111 |
| chr5.4 | mRNA | 56777614 | 56782710 | 56777614 | ID=MS.gene26111.t1;Parent=MS.gene26111 |
| chr5.4 | exon | 56782388 | 56782710 | 56782388 | ID=MS.gene26111.t1.exon1;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56782388 | 56782710 | 56782388 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| chr5.4 | exon | 56782094 | 56782192 | 56782094 | ID=MS.gene26111.t1.exon2;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56782094 | 56782192 | 56782094 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| chr5.4 | exon | 56781585 | 56781658 | 56781585 | ID=MS.gene26111.t1.exon3;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56781585 | 56781658 | 56781585 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| chr5.4 | exon | 56781345 | 56781421 | 56781345 | ID=MS.gene26111.t1.exon4;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56781345 | 56781421 | 56781345 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| chr5.4 | exon | 56781169 | 56781240 | 56781169 | ID=MS.gene26111.t1.exon5;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56781169 | 56781240 | 56781169 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| chr5.4 | exon | 56780075 | 56780143 | 56780075 | ID=MS.gene26111.t1.exon6;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56780075 | 56780143 | 56780075 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| chr5.4 | exon | 56779919 | 56779965 | 56779919 | ID=MS.gene26111.t1.exon7;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56779919 | 56779965 | 56779919 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| chr5.4 | exon | 56779282 | 56779411 | 56779282 | ID=MS.gene26111.t1.exon8;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56779282 | 56779411 | 56779282 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| chr5.4 | exon | 56779095 | 56779163 | 56779095 | ID=MS.gene26111.t1.exon9;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56779095 | 56779163 | 56779095 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| chr5.4 | exon | 56778901 | 56779004 | 56778901 | ID=MS.gene26111.t1.exon10;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56778901 | 56779004 | 56778901 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| chr5.4 | exon | 56778195 | 56778270 | 56778195 | ID=MS.gene26111.t1.exon11;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56778195 | 56778270 | 56778195 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| chr5.4 | exon | 56777614 | 56777757 | 56777614 | ID=MS.gene26111.t1.exon12;Parent=MS.gene26111.t1 |
| chr5.4 | CDS | 56777614 | 56777757 | 56777614 | ID=cds.MS.gene26111.t1;Parent=MS.gene26111.t1 |
| Gene Sequence |
| Protein sequence |
