Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063264.t1 | XP_003589944.1 | 81.4 | 323 | 45 | 2 | 1 | 323 | 1 | 308 | 1.60E-131 | 479.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063264.t1 | Q9FPT1 | 50.0 | 130 | 63 | 1 | 13 | 142 | 56 | 183 | 1.2e-31 | 138.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063264.t1 | G7I3Q3 | 81.4 | 323 | 45 | 2 | 1 | 323 | 1 | 308 | 1.1e-131 | 479.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene063264 | MS.gene038324 | PPI |
| MS.gene063264 | MS.gene038328 | PPI |
| MS.gene063264 | MS.gene030029 | PPI |
| MS.gene063264 | MS.gene030042 | PPI |
| MS.gene038323 | MS.gene063264 | PPI |
| MS.gene063264 | MS.gene057065 | PPI |
| MS.gene038333 | MS.gene063264 | PPI |
| MS.gene063264 | MS.gene030034 | PPI |
| MS.gene063264 | MS.gene017115 | PPI |
| MS.gene063264 | MS.gene057066 | PPI |
| MS.gene063264 | MS.gene038327 | PPI |
| MS.gene063264 | MS.gene057069 | PPI |
| MS.gene063264 | MS.gene017101 | PPI |
| MS.gene038330 | MS.gene063264 | PPI |
| MS.gene063264 | MS.gene017099 | PPI |
| MS.gene017102 | MS.gene063264 | PPI |
| MS.gene063264 | MS.gene030037 | PPI |
| MS.gene063264 | MS.gene057090 | PPI |
| MS.gene063264 | MS.gene038300 | PPI |
| MS.gene063264 | MS.gene057070 | PPI |
| MS.gene063264 | MS.gene030045 | PPI |
| MS.gene063264 | MS.gene038342 | PPI |
| MS.gene063264 | MS.gene017100 | PPI |
| MS.gene030033 | MS.gene063264 | PPI |
| MS.gene063264 | MS.gene030026 | PPI |
| MS.gene038336 | MS.gene063264 | PPI |
| MS.gene063264 | MS.gene017102 | PPI |
| MS.gene063264 | MS.gene038326 | PPI |
| MS.gene063264 | MS.gene017083 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063264.t1 | MTR_1g042160 | 80.805 | 323 | 47 | 2 | 1 | 323 | 1 | 308 | 0.0 | 526 |
| MS.gene063264.t1 | MTR_7g107200 | 42.408 | 382 | 157 | 5 | 1 | 325 | 1 | 376 | 3.34e-102 | 305 |
| MS.gene063264.t1 | MTR_7g107160 | 43.582 | 335 | 166 | 7 | 2 | 323 | 119 | 443 | 1.07e-77 | 244 |
| MS.gene063264.t1 | MTR_7g107160 | 57.018 | 114 | 47 | 1 | 69 | 182 | 1 | 112 | 1.12e-36 | 137 |
| MS.gene063264.t1 | MTR_7g107170 | 59.006 | 161 | 52 | 2 | 183 | 329 | 109 | 269 | 7.35e-55 | 180 |
| MS.gene063264.t1 | MTR_7g107170 | 54.023 | 87 | 40 | 0 | 228 | 314 | 1 | 87 | 7.67e-23 | 96.3 |
| MS.gene063264.t1 | MTR_8g011730 | 31.180 | 356 | 191 | 7 | 12 | 326 | 13 | 355 | 2.40e-46 | 160 |
| MS.gene063264.t1 | MTR_3g079840 | 46.923 | 130 | 67 | 1 | 13 | 142 | 57 | 184 | 1.59e-37 | 142 |
| MS.gene063264.t1 | MTR_3g079840 | 46.923 | 130 | 67 | 1 | 13 | 142 | 56 | 183 | 1.62e-37 | 142 |
| MS.gene063264.t1 | MTR_5g086700 | 45.385 | 130 | 69 | 1 | 13 | 142 | 61 | 188 | 1.19e-36 | 140 |
| MS.gene063264.t1 | MTR_5g086700 | 45.385 | 130 | 69 | 1 | 13 | 142 | 61 | 188 | 1.20e-36 | 140 |
| MS.gene063264.t1 | MTR_5g091450 | 41.270 | 126 | 73 | 1 | 13 | 138 | 33 | 157 | 1.45e-31 | 125 |
| MS.gene063264.t1 | MTR_1g041240 | 42.748 | 131 | 72 | 2 | 13 | 143 | 58 | 185 | 2.19e-31 | 125 |
| MS.gene063264.t1 | MTR_1g041240 | 42.748 | 131 | 72 | 2 | 13 | 143 | 59 | 186 | 2.21e-31 | 125 |
| MS.gene063264.t1 | MTR_1g041240 | 42.748 | 131 | 72 | 2 | 13 | 143 | 57 | 184 | 2.48e-31 | 124 |
| MS.gene063264.t1 | MTR_5g091180 | 39.416 | 137 | 80 | 2 | 13 | 149 | 46 | 179 | 8.23e-27 | 111 |
| MS.gene063264.t1 | MTR_5g091550 | 35.433 | 127 | 80 | 1 | 12 | 138 | 18 | 142 | 5.25e-23 | 99.8 |
| MS.gene063264.t1 | MTR_5g091550 | 35.433 | 127 | 80 | 1 | 12 | 138 | 18 | 142 | 5.32e-23 | 99.4 |
| MS.gene063264.t1 | MTR_3g106700 | 31.915 | 141 | 87 | 2 | 13 | 144 | 406 | 546 | 3.97e-19 | 89.0 |
| MS.gene063264.t1 | MTR_3g106700 | 28.906 | 128 | 88 | 3 | 16 | 140 | 71 | 198 | 3.67e-13 | 70.9 |
| MS.gene063264.t1 | MTR_4g123750 | 23.718 | 156 | 111 | 3 | 14 | 161 | 20 | 175 | 7.75e-15 | 74.3 |
| MS.gene063264.t1 | MTR_4g123750 | 31.008 | 129 | 87 | 2 | 13 | 140 | 176 | 303 | 1.11e-11 | 65.1 |
| MS.gene063264.t1 | MTR_1g073800 | 27.891 | 147 | 102 | 4 | 2 | 147 | 38 | 181 | 4.18e-14 | 73.2 |
| MS.gene063264.t1 | MTR_1g073790 | 27.891 | 147 | 100 | 4 | 2 | 147 | 51 | 192 | 1.28e-13 | 72.4 |
| MS.gene063264.t1 | MTR_1g044450 | 29.630 | 135 | 89 | 4 | 9 | 142 | 61 | 190 | 5.58e-13 | 70.5 |
| MS.gene063264.t1 | MTR_5g091530 | 36.047 | 86 | 55 | 0 | 54 | 139 | 1 | 86 | 3.54e-12 | 67.0 |
| MS.gene063264.t1 | MTR_2g034780 | 34.586 | 133 | 70 | 5 | 195 | 323 | 140 | 259 | 1.09e-11 | 64.7 |
| MS.gene063264.t1 | MTR_8g006190 | 26.667 | 120 | 83 | 2 | 26 | 140 | 5 | 124 | 3.27e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063264.t1 | AT5G06600 | 50.000 | 130 | 63 | 1 | 13 | 142 | 55 | 182 | 5.55e-37 | 141 |
| MS.gene063264.t1 | AT5G06600 | 50.000 | 130 | 63 | 1 | 13 | 142 | 56 | 183 | 5.55e-37 | 141 |
| MS.gene063264.t1 | AT5G06600 | 50.000 | 130 | 63 | 1 | 13 | 142 | 56 | 183 | 5.98e-37 | 141 |
| MS.gene063264.t1 | AT3G11910 | 49.231 | 130 | 64 | 1 | 13 | 142 | 54 | 181 | 1.15e-36 | 140 |
| MS.gene063264.t1 | AT3G11910 | 49.231 | 130 | 64 | 1 | 13 | 142 | 54 | 181 | 1.15e-36 | 140 |
| MS.gene063264.t1 | AT3G11910 | 49.231 | 130 | 64 | 1 | 13 | 142 | 55 | 182 | 1.17e-36 | 140 |
| MS.gene063264.t1 | AT3G11910 | 49.231 | 130 | 64 | 1 | 13 | 142 | 55 | 182 | 1.17e-36 | 140 |
| MS.gene063264.t1 | AT3G58250 | 37.984 | 129 | 80 | 0 | 12 | 140 | 9 | 137 | 1.14e-26 | 107 |
| MS.gene063264.t1 | AT3G58270 | 38.636 | 132 | 79 | 1 | 9 | 140 | 4 | 133 | 6.57e-25 | 103 |
| MS.gene063264.t1 | AT3G58270 | 38.636 | 132 | 79 | 1 | 9 | 140 | 4 | 133 | 6.57e-25 | 103 |
| MS.gene063264.t1 | AT3G58270 | 38.636 | 132 | 79 | 1 | 9 | 140 | 4 | 133 | 6.57e-25 | 103 |
| MS.gene063264.t1 | AT3G58360 | 26.557 | 305 | 196 | 6 | 9 | 301 | 4 | 292 | 3.44e-21 | 92.4 |
| MS.gene063264.t1 | AT3G58340 | 33.071 | 127 | 83 | 1 | 12 | 138 | 7 | 131 | 4.71e-21 | 92.0 |
| MS.gene063264.t1 | AT3G58340 | 33.071 | 127 | 83 | 1 | 12 | 138 | 7 | 131 | 5.83e-21 | 92.0 |
| MS.gene063264.t1 | AT2G05410 | 36.000 | 125 | 77 | 2 | 5 | 129 | 2 | 123 | 5.94e-19 | 86.3 |
| MS.gene063264.t1 | AT3G58210 | 32.812 | 128 | 86 | 0 | 13 | 140 | 8 | 135 | 4.50e-18 | 84.0 |
| MS.gene063264.t1 | AT3G58370 | 34.328 | 134 | 85 | 2 | 7 | 138 | 3 | 135 | 1.97e-17 | 81.6 |
| MS.gene063264.t1 | AT3G58410 | 30.769 | 130 | 85 | 2 | 9 | 138 | 4 | 128 | 7.62e-17 | 80.5 |
| MS.gene063264.t1 | AT3G58350 | 32.090 | 134 | 88 | 2 | 12 | 143 | 7 | 139 | 9.21e-17 | 79.7 |
| MS.gene063264.t1 | AT3G58350 | 32.090 | 134 | 88 | 2 | 12 | 143 | 7 | 139 | 9.21e-17 | 79.7 |
| MS.gene063264.t1 | AT2G25320 | 30.496 | 141 | 88 | 3 | 13 | 144 | 405 | 544 | 1.08e-16 | 81.6 |
| MS.gene063264.t1 | AT2G25320 | 29.688 | 128 | 87 | 3 | 16 | 140 | 76 | 203 | 1.23e-13 | 72.4 |
| MS.gene063264.t1 | AT2G25320 | 30.496 | 141 | 88 | 3 | 13 | 144 | 404 | 543 | 1.09e-16 | 81.6 |
| MS.gene063264.t1 | AT2G25320 | 29.688 | 128 | 87 | 3 | 16 | 140 | 75 | 202 | 1.23e-13 | 72.4 |
| MS.gene063264.t1 | AT2G25320 | 30.496 | 141 | 88 | 3 | 13 | 144 | 405 | 544 | 2.07e-16 | 80.9 |
| MS.gene063264.t1 | AT2G25320 | 29.688 | 128 | 87 | 3 | 16 | 140 | 76 | 203 | 1.22e-13 | 72.4 |
| MS.gene063264.t1 | AT2G25330 | 31.915 | 141 | 87 | 2 | 13 | 144 | 359 | 499 | 3.90e-16 | 79.7 |
| MS.gene063264.t1 | AT2G25330 | 28.906 | 128 | 88 | 3 | 16 | 140 | 50 | 177 | 1.37e-12 | 68.9 |
| MS.gene063264.t1 | AT3G27040 | 29.630 | 135 | 94 | 1 | 12 | 146 | 8 | 141 | 8.60e-16 | 76.6 |
| MS.gene063264.t1 | AT3G58290 | 27.941 | 136 | 88 | 3 | 12 | 138 | 10 | 144 | 5.73e-15 | 74.3 |
| MS.gene063264.t1 | AT2G01790 | 30.952 | 126 | 86 | 1 | 16 | 140 | 11 | 136 | 7.80e-15 | 73.9 |
| MS.gene063264.t1 | AT3G17380 | 28.467 | 137 | 93 | 2 | 17 | 148 | 25 | 161 | 8.93e-15 | 74.3 |
| MS.gene063264.t1 | AT3G17380 | 29.457 | 129 | 89 | 2 | 13 | 140 | 175 | 302 | 2.27e-12 | 67.0 |
| MS.gene063264.t1 | AT3G58260 | 29.851 | 134 | 92 | 2 | 9 | 140 | 4 | 137 | 1.21e-14 | 73.9 |
| MS.gene063264.t1 | AT3G44800 | 31.538 | 130 | 88 | 1 | 11 | 140 | 3 | 131 | 1.35e-14 | 73.9 |
| MS.gene063264.t1 | AT3G58200 | 32.759 | 116 | 75 | 2 | 13 | 127 | 8 | 121 | 1.84e-14 | 73.6 |
| MS.gene063264.t1 | AT2G05420 | 30.075 | 133 | 84 | 3 | 15 | 139 | 11 | 142 | 2.36e-13 | 70.1 |
| MS.gene063264.t1 | AT3G58410 | 28.462 | 130 | 74 | 2 | 9 | 138 | 25 | 135 | 6.61e-13 | 68.9 |
| MS.gene063264.t1 | AT5G26260 | 26.752 | 157 | 106 | 4 | 12 | 159 | 58 | 214 | 8.54e-13 | 68.9 |
| MS.gene063264.t1 | AT5G52330 | 28.662 | 157 | 100 | 5 | 9 | 165 | 16 | 160 | 1.16e-12 | 68.6 |
| MS.gene063264.t1 | AT5G52330 | 28.662 | 157 | 100 | 5 | 9 | 165 | 16 | 160 | 1.16e-12 | 68.6 |
| MS.gene063264.t1 | AT5G52330 | 28.662 | 157 | 100 | 5 | 9 | 165 | 16 | 160 | 1.16e-12 | 68.6 |
| MS.gene063264.t1 | AT5G43560 | 30.952 | 126 | 82 | 3 | 9 | 134 | 66 | 186 | 1.90e-12 | 68.6 |
| MS.gene063264.t1 | AT5G43560 | 30.952 | 126 | 82 | 3 | 9 | 134 | 66 | 186 | 1.90e-12 | 68.6 |
| MS.gene063264.t1 | AT4G09780 | 36.290 | 124 | 75 | 4 | 13 | 134 | 214 | 335 | 4.03e-12 | 67.0 |
| MS.gene063264.t1 | AT5G26320 | 28.889 | 135 | 90 | 3 | 31 | 159 | 81 | 215 | 1.01e-11 | 65.5 |
| MS.gene063264.t1 | AT2G42480 | 33.333 | 129 | 77 | 5 | 14 | 138 | 8 | 131 | 2.64e-11 | 64.3 |
| MS.gene063264.t1 | AT1G31390 | 27.731 | 119 | 85 | 1 | 12 | 129 | 7 | 125 | 7.63e-11 | 62.4 |
| MS.gene063264.t1 | AT2G42460 | 32.374 | 139 | 90 | 3 | 8 | 146 | 4 | 138 | 9.48e-11 | 62.4 |
Find 0 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAAATATGATATTACT+TGG | + | 10861:1454-1473 | MS.gene063264:CDS | 10.0% |
| !! | GTAAAAGAGTTTCAATATTT+GGG | - | 10861:1272-1291 | MS.gene063264:intergenic | 20.0% |
| !! | TGTAAAAGAGTTTCAATATT+TGG | - | 10861:1273-1292 | MS.gene063264:intergenic | 20.0% |
| !!! | ATTTGTGTTTTGATCTTATT+TGG | + | 10861:599-618 | MS.gene063264:intron | 20.0% |
| ! | AGTAGATTTAGATTCTGAAT+TGG | + | 10861:1665-1684 | MS.gene063264:CDS | 25.0% |
| ! | ATAACTTATCAACATTCAAG+TGG | - | 10861:463-482 | MS.gene063264:intergenic | 25.0% |
| ! | GTAGATTTAGATTCTGAATT+GGG | + | 10861:1666-1685 | MS.gene063264:CDS | 25.0% |
| ! | TAACTTATCAACATTCAAGT+GGG | - | 10861:462-481 | MS.gene063264:intergenic | 25.0% |
| ! | TAACTTCTGCAAAATTATAG+TGG | - | 10861:886-905 | MS.gene063264:intergenic | 25.0% |
| ! | TTCATTCAAATAACTTACCA+TGG | - | 10861:515-534 | MS.gene063264:intergenic | 25.0% |
| ! | TTTAGGGATAAAAAGATATG+TGG | + | 10861:1500-1519 | MS.gene063264:CDS | 25.0% |
| !!! | ATCTTATTTGGTTTTGTTGT+AGG | + | 10861:611-630 | MS.gene063264:intron | 25.0% |
| !!! | TAAGGATCTTCAAGTTTTAT+GGG | + | 10861:1419-1438 | MS.gene063264:CDS | 25.0% |
| AGATATTTGAGAAGTTCACA+TGG | + | 10861:420-439 | MS.gene063264:CDS | 30.0% | |
| AGTTTGACTACCAAATGTAA+GGG | - | 10861:1196-1215 | MS.gene063264:intergenic | 30.0% | |
| CCAGTTACATATATATTTGG+AGG | + | 10861:675-694 | MS.gene063264:CDS | 30.0% | |
| CCTCCAAATATATATGTAAC+TGG | - | 10861:678-697 | MS.gene063264:intergenic | 30.0% | |
| CGACCAGTTACATATATATT+TGG | + | 10861:672-691 | MS.gene063264:CDS | 30.0% | |
| GTGAATGATACTTGTATTGT+TGG | + | 10861:1102-1121 | MS.gene063264:CDS | 30.0% | |
| TAAAACTTGAAGATCCTTAC+AGG | - | 10861:1418-1437 | MS.gene063264:intergenic | 30.0% | |
| TGCATGTTCATTATGCTTTA+GGG | + | 10861:1484-1503 | MS.gene063264:CDS | 30.0% | |
| TTAATCTATATATCCACCAG+TGG | - | 10861:547-566 | MS.gene063264:intergenic | 30.0% | |
| TTGCATGTTCATTATGCTTT+AGG | + | 10861:1483-1502 | MS.gene063264:CDS | 30.0% | |
| ! | GTGTATGTTTGATTTCATTG+TGG | + | 10861:837-856 | MS.gene063264:intron | 30.0% |
| !! | AGAGACTTGTTGAAATCAAA+AGG | + | 10861:1633-1652 | MS.gene063264:CDS | 30.0% |
| !! | GTAAGGATCTTCAAGTTTTA+TGG | + | 10861:1418-1437 | MS.gene063264:CDS | 30.0% |
| !!! | TTATTTGGTTTTGTTGTAGG+AGG | + | 10861:614-633 | MS.gene063264:intron | 30.0% |
| AAGACTGCTAATATGTCTGA+GGG | + | 10861:703-722 | MS.gene063264:CDS | 35.0% | |
| AAGATATGTGGAGAAAGCTT+TGG | + | 10861:1512-1531 | MS.gene063264:CDS | 35.0% | |
| CACTTAATCACTTTGCAAGA+CGG | - | 10861:820-839 | MS.gene063264:intergenic | 35.0% | |
| CAGTTTGACTACCAAATGTA+AGG | - | 10861:1197-1216 | MS.gene063264:intergenic | 35.0% | |
| GAATGAATCACAATTTCCAC+TGG | + | 10861:528-547 | MS.gene063264:intron | 35.0% | |
| GACAACAGAACAATCACAAA+AGG | + | 10861:775-794 | MS.gene063264:CDS | 35.0% | |
| TACCAAATGTAAGGGATGAA+GGG | - | 10861:1188-1207 | MS.gene063264:intergenic | 35.0% | |
| TAGATTCTGAATTGGGATGT+GGG | + | 10861:1673-1692 | MS.gene063264:CDS | 35.0% | |
| TGATACTTGTATTGTTGGTG+TGG | + | 10861:1107-1126 | MS.gene063264:CDS | 35.0% | |
| TTAGATTCTGAATTGGGATG+TGG | + | 10861:1672-1691 | MS.gene063264:CDS | 35.0% | |
| ! | CTTACATTTGGTAGTCAAAC+TGG | + | 10861:1195-1214 | MS.gene063264:CDS | 35.0% |
| ! | TTCTTCACTAGTTTCTACTG+AGG | + | 10861:1296-1315 | MS.gene063264:CDS | 35.0% |
| AGGATTCTTCTCTTCCCAAA+GGG | + | 10861:634-653 | MS.gene063264:CDS | 40.0% | |
| ATCCCTTCATCCCTTACATT+TGG | + | 10861:1183-1202 | MS.gene063264:CDS | 40.0% | |
| CTACCAAATGTAAGGGATGA+AGG | - | 10861:1189-1208 | MS.gene063264:intergenic | 40.0% | |
| CTTACCATGGATATCCACTA+AGG | - | 10861:502-521 | MS.gene063264:intergenic | 40.0% | |
| GAAGACTGCTAATATGTCTG+AGG | + | 10861:702-721 | MS.gene063264:CDS | 40.0% | |
| TCAAACTGGTCAAATGGAAG+TGG | + | 10861:1209-1228 | MS.gene063264:CDS | 40.0% | |
| TGAAAAGTTGAAGGAGAGCA+TGG | + | 10861:1539-1558 | MS.gene063264:CDS | 40.0% | |
| TGAATCACAATTTCCACTGG+TGG | + | 10861:531-550 | MS.gene063264:intron | 40.0% | |
| TGCTGTATTCAATCAAGTCG+AGG | + | 10861:753-772 | MS.gene063264:CDS | 40.0% | |
| TGGTAGTCAAACTGGTCAAA+TGG | + | 10861:1203-1222 | MS.gene063264:CDS | 40.0% | |
| TTAATCACTTTGCAAGACGG+AGG | - | 10861:817-836 | MS.gene063264:intergenic | 40.0% | |
| TTTGGAGGCTGAAAAGTTGA+AGG | + | 10861:1530-1549 | MS.gene063264:CDS | 40.0% | |
| ! | ATATGTGGAGAAAGCTTTGG+AGG | + | 10861:1515-1534 | MS.gene063264:CDS | 40.0% |
| ! | TTAGTTGAGCTTTGTCATCC+TGG | + | 10861:1066-1085 | MS.gene063264:CDS | 40.0% |
| !! | GGATCTTCAAGTTTTATGGG+AGG | + | 10861:1422-1441 | MS.gene063264:CDS | 40.0% |
| !!! | CTCTGGCTTTTCTAGTCTTA+AGG | - | 10861:1380-1399 | MS.gene063264:intergenic | 40.0% |
| CTGCTAATATGTCTGAGGGA+TGG | + | 10861:707-726 | MS.gene063264:CDS | 45.0% | |
| GAGGATTCTTCTCTTCCCAA+AGG | + | 10861:633-652 | MS.gene063264:CDS | 45.0% | |
| GCTCGAATTGGAAAGGCTAA+AGG | + | 10861:1572-1591 | MS.gene063264:CDS | 45.0% | |
| GGAAAGGCTAAAGGTCAAGT+CGG | + | 10861:1581-1600 | MS.gene063264:CDS | 45.0% | |
| GGATATCCACTAAGGACGAA+AGG | - | 10861:494-513 | MS.gene063264:intergenic | 45.0% | |
| GGATTCTTCTCTTCCCAAAG+GGG | + | 10861:635-654 | MS.gene063264:CDS | 45.0% | |
| TAAAGATCCTGACGCAGAGT+CGG | + | 10861:1323-1342 | MS.gene063264:CDS | 45.0% | |
| TTCACAATAAACCCCCTTCC+AGG | - | 10861:1087-1106 | MS.gene063264:intergenic | 45.0% | |
| ! | TCGTCCTTAGTGGATATCCA+TGG | + | 10861:495-514 | MS.gene063264:CDS | 45.0% |
| ! | TGAGCTTTGTCATCCTGGAA+GGG | + | 10861:1071-1090 | MS.gene063264:CDS | 45.0% |
| ! | TTGAGCTTTGTCATCCTGGA+AGG | + | 10861:1070-1089 | MS.gene063264:CDS | 45.0% |
| !! | TTCTGGAGCTCGAATTGGAA+AGG | + | 10861:1565-1584 | MS.gene063264:CDS | 45.0% |
| ACTGCACTACTCTTCCCCTT+TGG | - | 10861:652-671 | MS.gene063264:intergenic | 50.0% | |
| ACTTTGCAAGACGGAGGAAG+AGG | - | 10861:811-830 | MS.gene063264:intergenic | 50.0% | |
| AGTGCAAGTCAGGATGACTG+GGG | + | 10861:1024-1043 | MS.gene063264:CDS | 50.0% | |
| ATATTTGGGCCTCGACCTTC+AGG | - | 10861:1258-1277 | MS.gene063264:intergenic | 50.0% | |
| CAGTGCAAGTCAGGATGACT+GGG | + | 10861:1023-1042 | MS.gene063264:CDS | 50.0% | |
| CATGAACGAGCAAGCCTGTA+AGG | + | 10861:1401-1420 | MS.gene063264:CDS | 50.0% | |
| CTGCACTACTCTTCCCCTTT+GGG | - | 10861:651-670 | MS.gene063264:intergenic | 50.0% | |
| GAATTGGGATGTGGGAGTTG+TGG | + | 10861:1681-1700 | MS.gene063264:CDS | 50.0% | |
| GTCCTAACAGCAAAGCCTGA+AGG | + | 10861:1240-1259 | MS.gene063264:CDS | 50.0% | |
| GTGGCTACGCAAGAGTCATA+TGG | + | 10861:856-875 | MS.gene063264:intron | 50.0% | |
| TCAGTGCAAGTCAGGATGAC+TGG | + | 10861:1022-1041 | MS.gene063264:CDS | 50.0% | |
| TCCACTAAGGACGAAAGGCT+CGG | - | 10861:489-508 | MS.gene063264:intergenic | 50.0% | |
| ! | AGCTTTGTCATCCTGGAAGG+GGG | + | 10861:1073-1092 | MS.gene063264:CDS | 50.0% |
| ! | GAAGGAGAGCATGGTAGTTC+TGG | + | 10861:1548-1567 | MS.gene063264:CDS | 50.0% |
| ! | GAGCTTTGTCATCCTGGAAG+GGG | + | 10861:1072-1091 | MS.gene063264:CDS | 50.0% |
| ! | GAGTCGGTGTTTGCTGCATT+AGG | + | 10861:1339-1358 | MS.gene063264:CDS | 50.0% |
| !! | CAGGCTTTGCTGTTAGGACT+AGG | - | 10861:1239-1258 | MS.gene063264:intergenic | 50.0% |
| !! | CTGAACTCGTGGCTAGTTTC+TGG | - | 10861:1006-1025 | MS.gene063264:intergenic | 50.0% |
| !! | GACCTTCAGGCTTTGCTGTT+AGG | - | 10861:1245-1264 | MS.gene063264:intergenic | 50.0% |
| !! | GGTAGTTCTGGAGCTCGAAT+TGG | + | 10861:1560-1579 | MS.gene063264:CDS | 50.0% |
| ACAGCAAAGCCTGAAGGTCG+AGG | + | 10861:1246-1265 | MS.gene063264:CDS | 55.0% | |
| CCACGAGTTCAGTGCAAGTC+AGG | + | 10861:1014-1033 | MS.gene063264:CDS | 55.0% | |
| TCCGAGCCTTTCGTCCTTAG+TGG | + | 10861:485-504 | MS.gene063264:CDS | 55.0% | |
| ! | CCTGACTTGCACTGAACTCG+TGG | - | 10861:1017-1036 | MS.gene063264:intergenic | 55.0% |
| ! | GGCTTGCTCGTTCATGTCTC+TGG | - | 10861:1397-1416 | MS.gene063264:intergenic | 55.0% |
| !! | GCAAACACCGACTCTGCGTC+AGG | - | 10861:1333-1352 | MS.gene063264:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 10861 | gene | 395 | 1710 | 395 | ID=MS.gene063264 |
| 10861 | mRNA | 395 | 1710 | 395 | ID=MS.gene063264.t1;Parent=MS.gene063264 |
| 10861 | exon | 395 | 516 | 395 | ID=MS.gene063264.t1.exon1;Parent=MS.gene063264.t1 |
| 10861 | CDS | 395 | 516 | 395 | ID=cds.MS.gene063264.t1;Parent=MS.gene063264.t1 |
| 10861 | exon | 633 | 796 | 633 | ID=MS.gene063264.t1.exon2;Parent=MS.gene063264.t1 |
| 10861 | CDS | 633 | 796 | 633 | ID=cds.MS.gene063264.t1;Parent=MS.gene063264.t1 |
| 10861 | exon | 1007 | 1710 | 1007 | ID=MS.gene063264.t1.exon3;Parent=MS.gene063264.t1 |
| 10861 | CDS | 1007 | 1710 | 1007 | ID=cds.MS.gene063264.t1;Parent=MS.gene063264.t1 |
| Gene Sequence |
| Protein sequence |
