Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063876.t1 | ABC59079.1 | 88.1 | 101 | 12 | 0 | 1 | 101 | 1 | 101 | 6.60E-42 | 179.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063876.t1 | H1A981 | 78.2 | 101 | 22 | 0 | 1 | 101 | 1 | 101 | 1.3e-38 | 160.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063876.t1 | Q2MJ17 | 88.1 | 101 | 12 | 0 | 1 | 101 | 1 | 101 | 4.8e-42 | 179.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene063876 | 0.812268 | 4.62E-51 | -1.69E-46 |
| MS.gene049151 | MS.gene063876 | 0.820794 | 5.68E-53 | -1.69E-46 |
| MS.gene049230 | MS.gene063876 | 0.830929 | 2.23E-55 | -1.69E-46 |
| MS.gene049378 | MS.gene063876 | 0.837968 | 3.80E-57 | -1.69E-46 |
| MS.gene049915 | MS.gene063876 | 0.811528 | 6.69E-51 | -1.69E-46 |
| MS.gene050105 | MS.gene063876 | 0.805657 | 1.20E-49 | -1.69E-46 |
| MS.gene050226 | MS.gene063876 | 0.816316 | 5.89E-52 | -1.69E-46 |
| MS.gene050227 | MS.gene063876 | 0.819468 | 1.14E-52 | -1.69E-46 |
| MS.gene050228 | MS.gene063876 | 0.815754 | 7.86E-52 | -1.69E-46 |
| MS.gene050623 | MS.gene063876 | -0.823093 | 1.67E-53 | -1.69E-46 |
| MS.gene050642 | MS.gene063876 | 0.838696 | 2.47E-57 | -1.69E-46 |
| MS.gene050953 | MS.gene063876 | 0.802245 | 6.15E-49 | -1.69E-46 |
| MS.gene051349 | MS.gene063876 | 0.808501 | 3.00E-50 | -1.69E-46 |
| MS.gene051452 | MS.gene063876 | 0.811556 | 6.60E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene063876 | 0.824668 | 7.13E-54 | -1.69E-46 |
| MS.gene051983 | MS.gene063876 | 0.834672 | 2.62E-56 | -1.69E-46 |
| MS.gene052077 | MS.gene063876 | 0.814909 | 1.21E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene063876 | 0.858387 | 8.53E-63 | -1.69E-46 |
| MS.gene052302 | MS.gene063876 | 0.804964 | 1.68E-49 | -1.69E-46 |
| MS.gene052309 | MS.gene063876 | -0.802755 | 4.83E-49 | -1.69E-46 |
| MS.gene052376 | MS.gene063876 | 0.822808 | 1.94E-53 | -1.69E-46 |
| MS.gene052389 | MS.gene063876 | 0.828018 | 1.14E-54 | -1.69E-46 |
| MS.gene052426 | MS.gene063876 | 0.819857 | 9.32E-53 | -1.69E-46 |
| MS.gene052856 | MS.gene063876 | 0.801315 | 9.54E-49 | -1.69E-46 |
| MS.gene053188 | MS.gene063876 | 0.827176 | 1.81E-54 | -1.69E-46 |
| MS.gene053216 | MS.gene063876 | 0.857999 | 1.11E-62 | -1.69E-46 |
| MS.gene053494 | MS.gene063876 | 0.820222 | 7.69E-53 | -1.69E-46 |
| MS.gene054379 | MS.gene063876 | 0.805538 | 1.27E-49 | -1.69E-46 |
| MS.gene054537 | MS.gene063876 | 0.841319 | 5.11E-58 | -1.69E-46 |
| MS.gene054542 | MS.gene063876 | 0.820924 | 5.30E-53 | -1.69E-46 |
| MS.gene054657 | MS.gene063876 | 0.819515 | 1.12E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene063876 | 0.834867 | 2.34E-56 | -1.69E-46 |
| MS.gene05510 | MS.gene063876 | 0.834202 | 3.43E-56 | -1.69E-46 |
| MS.gene055701 | MS.gene063876 | 0.840534 | 8.20E-58 | -1.69E-46 |
| MS.gene056087 | MS.gene063876 | 0.822535 | 2.25E-53 | -1.69E-46 |
| MS.gene056506 | MS.gene063876 | 0.81198 | 5.34E-51 | -1.69E-46 |
| MS.gene056979 | MS.gene063876 | 0.821524 | 3.86E-53 | -1.69E-46 |
| MS.gene057394 | MS.gene063876 | 0.80262 | 5.14E-49 | -1.69E-46 |
| MS.gene057754 | MS.gene063876 | 0.811433 | 7.02E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene063876 | 0.804542 | 2.06E-49 | -1.69E-46 |
| MS.gene058399 | MS.gene063876 | 0.845377 | 4.22E-59 | -1.69E-46 |
| MS.gene058435 | MS.gene063876 | 0.812318 | 4.50E-51 | -1.69E-46 |
| MS.gene058595 | MS.gene063876 | 0.815694 | 8.11E-52 | -1.69E-46 |
| MS.gene059285 | MS.gene063876 | 0.814845 | 1.25E-51 | -1.69E-46 |
| MS.gene059317 | MS.gene063876 | 0.801154 | 1.03E-48 | -1.69E-46 |
| MS.gene059421 | MS.gene063876 | 0.80317 | 3.96E-49 | -1.69E-46 |
| MS.gene059710 | MS.gene063876 | 0.80786 | 4.11E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene063876 | 0.829004 | 6.56E-55 | -1.69E-46 |
| MS.gene060297 | MS.gene063876 | 0.847672 | 9.97E-60 | -1.69E-46 |
| MS.gene060683 | MS.gene063876 | 0.821202 | 4.58E-53 | -1.69E-46 |
| MS.gene060685 | MS.gene063876 | 0.811968 | 5.37E-51 | -1.69E-46 |
| MS.gene060942 | MS.gene063876 | 0.801559 | 8.50E-49 | -1.69E-46 |
| MS.gene060998 | MS.gene063876 | 0.813616 | 2.34E-51 | -1.69E-46 |
| MS.gene061002 | MS.gene063876 | 0.804446 | 2.15E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene063876.t1 | MTR_8g042000 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 2.01e-58 | 184 |
| MS.gene063876.t1 | MTR_8g042000 | 87.129 | 101 | 13 | 0 | 1 | 101 | 1 | 101 | 5.75e-57 | 184 |
| MS.gene063876.t1 | MTR_8g042040 | 79.208 | 101 | 21 | 0 | 1 | 101 | 1 | 101 | 5.87e-52 | 170 |
| MS.gene063876.t1 | MTR_8g042020 | 79.208 | 101 | 21 | 0 | 1 | 101 | 1 | 101 | 1.35e-50 | 167 |
| MS.gene063876.t1 | MTR_8g042060 | 76.238 | 101 | 24 | 0 | 1 | 101 | 1 | 101 | 2.93e-49 | 163 |
| MS.gene063876.t1 | MTR_8g042060 | 76.238 | 101 | 24 | 0 | 1 | 101 | 1 | 101 | 9.62e-49 | 162 |
| MS.gene063876.t1 | MTR_2g072400 | 40.000 | 95 | 52 | 2 | 8 | 101 | 2 | 92 | 5.24e-16 | 72.4 |
| MS.gene063876.t1 | MTR_2g072330 | 36.634 | 101 | 60 | 1 | 8 | 108 | 3 | 99 | 1.55e-15 | 71.2 |
| MS.gene063876.t1 | MTR_2g055430 | 38.318 | 107 | 60 | 5 | 1 | 107 | 1 | 101 | 5.36e-14 | 66.6 |
| MS.gene063876.t1 | MTR_2g055430 | 38.318 | 107 | 60 | 5 | 1 | 107 | 1 | 101 | 7.68e-14 | 66.2 |
| MS.gene063876.t1 | MTR_2g072340 | 37.000 | 100 | 59 | 1 | 8 | 107 | 3 | 98 | 1.07e-13 | 65.9 |
| MS.gene063876.t1 | MTR_2g055470 | 36.036 | 111 | 65 | 5 | 1 | 111 | 1 | 105 | 6.85e-13 | 63.5 |
| MS.gene063876.t1 | MTR_2g072270 | 37.000 | 100 | 52 | 3 | 9 | 101 | 6 | 101 | 9.44e-13 | 63.2 |
| MS.gene063876.t1 | MTR_5g095230 | 36.170 | 94 | 51 | 3 | 10 | 101 | 5 | 91 | 4.69e-12 | 61.2 |
| MS.gene063876.t1 | MTR_2g072410 | 30.108 | 93 | 61 | 1 | 11 | 103 | 6 | 94 | 6.21e-12 | 57.4 |
| MS.gene063876.t1 | MTR_5g095230 | 36.170 | 94 | 51 | 3 | 10 | 101 | 5 | 91 | 6.29e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATAACCTTTCAGTATTAA+AGG | 0.250524 | 8.1:+61984824 | MS.gene063876:CDS |
| GATAGATGGTGCAACTTCTT+TGG | 0.289005 | 8.1:-61984913 | None:intergenic |
| TTTAATACTGAAAGGTTATA+TGG | 0.289696 | 8.1:-61984822 | None:intergenic |
| AGAAGCTTCTCTAACCTCTT+TGG | 0.301833 | 8.1:-61984774 | None:intergenic |
| GAGAAGCTTCTCAAAGCTTA+TGG | 0.318867 | 8.1:+61984786 | MS.gene063876:CDS |
| CATCAAGCTGTACACAAATA+TGG | 0.350284 | 8.1:+61984948 | MS.gene063876:CDS |
| CTCAAAGCTTATGGTCTTCA+AGG | 0.386697 | 8.1:+61984795 | MS.gene063876:CDS |
| ATTTACACTTATCTTCTTGT+TGG | 0.391812 | 8.1:-61984878 | None:intergenic |
| AAGTAGAACTGTTAGAAAAC+AGG | 0.419889 | 8.1:-61984709 | None:intergenic |
| GTGATTATTGTTGTTGTTGT+GGG | 0.438409 | 8.1:-61984687 | None:intergenic |
| TGAAGAGGTGAGAAGATAGA+TGG | 0.483390 | 8.1:-61984927 | None:intergenic |
| TTCTACTTGCTGTGATTCCA+TGG | 0.490272 | 8.1:+61984724 | MS.gene063876:CDS |
| ATTTGTCCTTTAATACTGAA+AGG | 0.527320 | 8.1:-61984830 | None:intergenic |
| GGTGATTATTGTTGTTGTTG+TGG | 0.528693 | 8.1:-61984688 | None:intergenic |
| GAAGATAAGTGTAAATCCAT+TGG | 0.534390 | 8.1:+61984885 | MS.gene063876:CDS |
| AACTTCTTTGGTGAGACCAA+TGG | 0.558077 | 8.1:-61984901 | None:intergenic |
| TTGTGTACAGCTTGATGAAG+AGG | 0.584589 | 8.1:-61984942 | None:intergenic |
| AAATTGTTGAAGAGATGCCA+TGG | 0.587822 | 8.1:-61984741 | None:intergenic |
| TTGCAACTGTAAGAAAATGC+AGG | 0.592722 | 8.1:-61986386 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTAATGTTAATATCAAATA+AGG | + | chr8.1:61985776-61985795 | MS.gene063876:intron | 15.0% |
| !!! | TTATTTTTATTTTTTGCCTT+GGG | - | chr8.1:61985214-61985233 | None:intergenic | 15.0% |
| !!! | TTTATTTTTATTTTTTGCCT+TGG | - | chr8.1:61985215-61985234 | None:intergenic | 15.0% |
| !!! | TTTTCTTTTCAATTATACAA+GGG | - | chr8.1:61985694-61985713 | None:intergenic | 15.0% |
| !!! | TTTTTCTTTTCAATTATACA+AGG | - | chr8.1:61985695-61985714 | None:intergenic | 15.0% |
| !! | AATCAAATTAACCATTAGTA+AGG | + | chr8.1:61985494-61985513 | MS.gene063876:intron | 20.0% |
| !! | ACATAGAAAAATTGAAAGTA+AGG | + | chr8.1:61986272-61986291 | MS.gene063876:intron | 20.0% |
| !! | ATATAACCTTTCAGTATTAA+AGG | + | chr8.1:61984824-61984843 | MS.gene063876:CDS | 20.0% |
| !! | ATGATTTACATTATACTGTA+GGG | + | chr8.1:61986356-61986375 | MS.gene063876:intron | 20.0% |
| !! | TATGATTTACATTATACTGT+AGG | + | chr8.1:61986355-61986374 | MS.gene063876:intron | 20.0% |
| !! | TCCATTATAAGATAGTATTA+AGG | - | chr8.1:61985413-61985432 | None:intergenic | 20.0% |
| !! | TTCTCATTGTTTATTAATAC+CGG | + | chr8.1:61985067-61985086 | MS.gene063876:intron | 20.0% |
| !! | TTTAATACTGAAAGGTTATA+TGG | - | chr8.1:61984825-61984844 | None:intergenic | 20.0% |
| !!! | AAAGTTTTAAAAAGTGTTAG+TGG | - | chr8.1:61985624-61985643 | None:intergenic | 20.0% |
| !!! | AATTTGTTGTTCTAACATAA+AGG | + | chr8.1:61986036-61986055 | MS.gene063876:intron | 20.0% |
| !!! | TATTTTTATTTTTTGCCTTG+GGG | - | chr8.1:61985213-61985232 | None:intergenic | 20.0% |
| !!! | TCAATTTTGATTGTTATTGA+TGG | + | chr8.1:61985008-61985027 | MS.gene063876:intron | 20.0% |
| !!! | TTACTTTCAATTTTTCTATG+TGG | - | chr8.1:61986273-61986292 | None:intergenic | 20.0% |
| !!! | TTTGTAATTTTTTCCTTAGA+AGG | - | chr8.1:61985142-61985161 | None:intergenic | 20.0% |
| ! | AACATAAAGGATATATATGC+AGG | + | chr8.1:61986049-61986068 | MS.gene063876:intron | 25.0% |
| ! | AGAAACAAATTCCTTACTAA+TGG | - | chr8.1:61985508-61985527 | None:intergenic | 25.0% |
| ! | ATTTACACTTATCTTCTTGT+TGG | - | chr8.1:61984881-61984900 | None:intergenic | 25.0% |
| ! | ATTTGTCCTTTAATACTGAA+AGG | - | chr8.1:61984833-61984852 | None:intergenic | 25.0% |
| ! | GCCTTAATACTATCTTATAA+TGG | + | chr8.1:61985409-61985428 | MS.gene063876:intron | 25.0% |
| ! | GTTTATCTATCTGTTTACTT+TGG | + | chr8.1:61986003-61986022 | MS.gene063876:intron | 25.0% |
| ! | TCTCATTGTTTATTAATACC+GGG | + | chr8.1:61985068-61985087 | MS.gene063876:intron | 25.0% |
| !! | AAATCCATTTCCAAGTATTT+TGG | + | chr8.1:61986181-61986200 | MS.gene063876:intron | 25.0% |
| !! | AGGAAAGAATTCCTTTTTAT+GGG | + | chr8.1:61986069-61986088 | MS.gene063876:intron | 25.0% |
| !!! | ATTTTTATTTTTTGCCTTGG+GGG | - | chr8.1:61985212-61985231 | None:intergenic | 25.0% |
| !!! | GGTTTTGTAGTTTTTTTCTT+AGG | + | chr8.1:61985336-61985355 | MS.gene063876:intron | 25.0% |
| AACACCAAAATACTTGGAAA+TGG | - | chr8.1:61986188-61986207 | None:intergenic | 30.0% | |
| AAGTAGAACTGTTAGAAAAC+AGG | - | chr8.1:61984712-61984731 | None:intergenic | 30.0% | |
| AATGTAAACTAAACTCCTCT+AGG | - | chr8.1:61985726-61985745 | None:intergenic | 30.0% | |
| AGTTTACATTATCAGATGCA+AGG | + | chr8.1:61985736-61985755 | MS.gene063876:intron | 30.0% | |
| ATCACAACTTTGTGAAAGTT+AGG | + | chr8.1:61985366-61985385 | MS.gene063876:intron | 30.0% | |
| ATCGCAACTTCGTAAAAATT+AGG | - | chr8.1:61985114-61985133 | None:intergenic | 30.0% | |
| CATTAAGTCCATTTCATGTT+TGG | - | chr8.1:61985763-61985782 | None:intergenic | 30.0% | |
| GAAGATAAGTGTAAATCCAT+TGG | + | chr8.1:61984885-61984904 | MS.gene063876:CDS | 30.0% | |
| GTTTCTTCATAATTGTGTTG+CGG | + | chr8.1:61985522-61985541 | MS.gene063876:intron | 30.0% | |
| TATACCAACACCAAAATACT+TGG | - | chr8.1:61986194-61986213 | None:intergenic | 30.0% | |
| TATCTCTTCAATCTCAATTG+AGG | - | chr8.1:61985568-61985587 | None:intergenic | 30.0% | |
| TCGCAACTTCGTAAAAATTA+GGG | - | chr8.1:61985113-61985132 | None:intergenic | 30.0% | |
| TGACATGATTCTCAACTAAA+AGG | + | chr8.1:61985655-61985674 | MS.gene063876:intron | 30.0% | |
| ! | AAGAATTCCTTTTTATGGGA+CGG | + | chr8.1:61986073-61986092 | MS.gene063876:intron | 30.0% |
| ! | AAGACTTCCTTAATTTGATC+AGG | - | chr8.1:61986127-61986146 | None:intergenic | 30.0% |
| ! | AATTTTTCTATGTGGAATGC+CGG | - | chr8.1:61986265-61986284 | None:intergenic | 30.0% |
| ! | AGACTTCCTTAATTTGATCA+GGG | - | chr8.1:61986126-61986145 | None:intergenic | 30.0% |
| ! | CAGGAAAGAATTCCTTTTTA+TGG | + | chr8.1:61986068-61986087 | MS.gene063876:intron | 30.0% |
| ! | CTTTCACAAAGTTGTGATTT+TGG | - | chr8.1:61985364-61985383 | None:intergenic | 30.0% |
| ! | GTGATTATTGTTGTTGTTGT+GGG | - | chr8.1:61984690-61984709 | None:intergenic | 30.0% |
| !!! | ATGGATTTTAACTCTGGTTT+AGG | - | chr8.1:61986169-61986188 | None:intergenic | 30.0% |
| !!! | ATTTCCAAGTATTTTGGTGT+TGG | + | chr8.1:61986187-61986206 | MS.gene063876:intron | 30.0% |
| !!! | ATTTTTGGCTTAAACCAAAG+AGG | + | chr8.1:61984760-61984779 | MS.gene063876:CDS | 30.0% |
| !!! | TGGATTTTAACTCTGGTTTA+GGG | - | chr8.1:61986168-61986187 | None:intergenic | 30.0% |
| !!! | TTGGAAATGGATTTTAACTC+TGG | - | chr8.1:61986175-61986194 | None:intergenic | 30.0% |
| AAATTGTTGAAGAGATGCCA+TGG | - | chr8.1:61984744-61984763 | None:intergenic | 35.0% | |
| ACAACTTTGTGAAAGTTAGG+TGG | + | chr8.1:61985369-61985388 | MS.gene063876:intron | 35.0% | |
| ACATCGAAAGATAGTCAATC+CGG | + | chr8.1:61986243-61986262 | MS.gene063876:intron | 35.0% | |
| CAACTTTGTGAAAGTTAGGT+GGG | + | chr8.1:61985370-61985389 | MS.gene063876:intron | 35.0% | |
| CAGATATACGTAGACACAAT+TGG | + | chr8.1:61985946-61985965 | MS.gene063876:intron | 35.0% | |
| CATCAAGCTGTACACAAATA+TGG | + | chr8.1:61984948-61984967 | MS.gene063876:CDS | 35.0% | |
| CGCAACTTCGTAAAAATTAG+GGG | - | chr8.1:61985112-61985131 | None:intergenic | 35.0% | |
| GCAACTTCGTAAAAATTAGG+GGG | - | chr8.1:61985111-61985130 | None:intergenic | 35.0% | |
| TGCTACAGTTGCAAAACTTA+GGG | - | chr8.1:61985171-61985190 | None:intergenic | 35.0% | |
| TTGCAACTGTAAGAAAATGC+AGG | - | chr8.1:61986389-61986408 | None:intergenic | 35.0% | |
| ! | CAACCTAAGTTTTGCAACTA+TGG | - | chr8.1:61985315-61985334 | None:intergenic | 35.0% |
| ! | GGCATCTCTTCAACAATTTT+TGG | + | chr8.1:61984745-61984764 | MS.gene063876:CDS | 35.0% |
| ! | GGTGATTATTGTTGTTGTTG+TGG | - | chr8.1:61984691-61984710 | None:intergenic | 35.0% |
| ! | TAGTTGCAAAACTTAGGTTG+CGG | + | chr8.1:61985315-61985334 | MS.gene063876:intron | 35.0% |
| ! | TGATGGTACTTTACCGATTA+TGG | + | chr8.1:61985025-61985044 | MS.gene063876:intron | 35.0% |
| ! | TTTTGCAACTATGGCAGTTT+TGG | - | chr8.1:61985306-61985325 | None:intergenic | 35.0% |
| ! | TTTTGCAACTGTAGCAGTTA+TGG | + | chr8.1:61985175-61985194 | MS.gene063876:intron | 35.0% |
| !! | CTATCTGTTTACTTTGGAGT+CGG | + | chr8.1:61986009-61986028 | MS.gene063876:intron | 35.0% |
| !! | TATCTGTTTACTTTGGAGTC+GGG | + | chr8.1:61986010-61986029 | MS.gene063876:intron | 35.0% |
| AACATGTAGCACCTCACTTA+GGG | + | chr8.1:61985240-61985259 | MS.gene063876:intron | 40.0% | |
| AACTTCTTTGGTGAGACCAA+TGG | - | chr8.1:61984904-61984923 | None:intergenic | 40.0% | |
| AATAGAGCAAGTAGAGCTGA+AGG | + | chr8.1:61985832-61985851 | MS.gene063876:intron | 40.0% | |
| AATTCCCCAACGACCATAAT+CGG | - | chr8.1:61985041-61985060 | None:intergenic | 40.0% | |
| ACGTATATCTGAGAGCAAAG+TGG | - | chr8.1:61985937-61985956 | None:intergenic | 40.0% | |
| AGAAAAAAGCAGAGTCCTAG+AGG | + | chr8.1:61985708-61985727 | MS.gene063876:intron | 40.0% | |
| AGAAGCTTCTCTAACCTCTT+TGG | - | chr8.1:61984777-61984796 | None:intergenic | 40.0% | |
| AGCATAGACCGAGTCAAAAT+TGG | + | chr8.1:61985272-61985291 | MS.gene063876:intron | 40.0% | |
| CACAGACCCTGATCAAATTA+AGG | + | chr8.1:61986117-61986136 | MS.gene063876:intron | 40.0% | |
| CTACAGTTGCAAAACTTAGG+GGG | - | chr8.1:61985169-61985188 | None:intergenic | 40.0% | |
| CTCAAAGCTTATGGTCTTCA+AGG | + | chr8.1:61984795-61984814 | MS.gene063876:CDS | 40.0% | |
| CTGCCATAGTTGCAAAACTT+AGG | + | chr8.1:61985309-61985328 | MS.gene063876:intron | 40.0% | |
| CTGCTACAGTTGCAAAACTT+AGG | - | chr8.1:61985172-61985191 | None:intergenic | 40.0% | |
| GAGAAGCTTCTCAAAGCTTA+TGG | + | chr8.1:61984786-61984805 | MS.gene063876:CDS | 40.0% | |
| GATAGATGGTGCAACTTCTT+TGG | - | chr8.1:61984916-61984935 | None:intergenic | 40.0% | |
| GCGAAAACTACTATTAAGCC+CGG | - | chr8.1:61985089-61985108 | None:intergenic | 40.0% | |
| GCTACAGTTGCAAAACTTAG+GGG | - | chr8.1:61985170-61985189 | None:intergenic | 40.0% | |
| GGGTCTGTGATGATAACATT+TGG | - | chr8.1:61986106-61986125 | None:intergenic | 40.0% | |
| TAACATGTAGCACCTCACTT+AGG | + | chr8.1:61985239-61985258 | MS.gene063876:intron | 40.0% | |
| TGAAGAGGTGAGAAGATAGA+TGG | - | chr8.1:61984930-61984949 | None:intergenic | 40.0% | |
| TGCAAGGACCAAACATGAAA+TGG | + | chr8.1:61985752-61985771 | MS.gene063876:intron | 40.0% | |
| TTGTGTACAGCTTGATGAAG+AGG | - | chr8.1:61984945-61984964 | None:intergenic | 40.0% | |
| ! | ACTTTACCGATTATGGTCGT+TGG | + | chr8.1:61985032-61985051 | MS.gene063876:intron | 40.0% |
| ! | CTTTACCGATTATGGTCGTT+GGG | + | chr8.1:61985033-61985052 | MS.gene063876:intron | 40.0% |
| ! | TTTACCGATTATGGTCGTTG+GGG | + | chr8.1:61985034-61985053 | MS.gene063876:intron | 40.0% |
| !! | ACCGAGTCAAAATTGGCTTT+GGG | + | chr8.1:61985279-61985298 | MS.gene063876:intron | 40.0% |
| !! | GTTGCGATTTTGACCTTCTA+AGG | + | chr8.1:61985126-61985145 | MS.gene063876:intron | 40.0% |
| !! | TTCTACTTGCTGTGATTCCA+TGG | + | chr8.1:61984724-61984743 | MS.gene063876:CDS | 40.0% |
| !!! | AGTGGCTGTGATTTTAGTTG+CGG | - | chr8.1:61985606-61985625 | None:intergenic | 40.0% |
| !!! | TCCCAAAGCCAATTTTGACT+CGG | - | chr8.1:61985283-61985302 | None:intergenic | 40.0% |
| ACACCTAGAGGGTGAGAAAT+GGG | + | chr8.1:61986216-61986235 | MS.gene063876:intron | 45.0% | |
| CGGTGAATTGCTAGTAGATG+CGG | + | chr8.1:61985542-61985561 | MS.gene063876:intron | 45.0% | |
| GTTGGTATAGCACACCTAGA+GGG | + | chr8.1:61986205-61986224 | MS.gene063876:intron | 45.0% | |
| TAGCAGTTATGGCGCAGTTA+TGG | + | chr8.1:61985186-61985205 | MS.gene063876:intron | 45.0% | |
| TGTTGCACCGTCCCATAAAA+AGG | - | chr8.1:61986083-61986102 | None:intergenic | 45.0% | |
| TGTTGGTATAGCACACCTAG+AGG | + | chr8.1:61986204-61986223 | MS.gene063876:intron | 45.0% | |
| ! | GACCGAGTCAAAATTGGCTT+TGG | + | chr8.1:61985278-61985297 | MS.gene063876:intron | 45.0% |
| CACACCTAGAGGGTGAGAAA+TGG | + | chr8.1:61986215-61986234 | MS.gene063876:intron | 50.0% | |
| CAGTTGCAAAACTTAGGGGG+CGG | - | chr8.1:61985166-61985185 | None:intergenic | 50.0% | |
| TAGCCCATTTCTCACCCTCT+AGG | - | chr8.1:61986222-61986241 | None:intergenic | 50.0% | |
| ! | TGAAGGCACAACATGCGTAG+CGG | + | chr8.1:61985849-61985868 | MS.gene063876:intron | 50.0% |
| CTGACGTGACACCCTAAGTG+AGG | - | chr8.1:61985254-61985273 | None:intergenic | 55.0% | |
| TGGCGCAGTTATGGCCCCCA+AGG | + | chr8.1:61985195-61985214 | MS.gene063876:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 61984669 | 61986411 | 61984669 | ID=MS.gene063876 |
| chr8.1 | mRNA | 61984669 | 61986411 | 61984669 | ID=MS.gene063876.t1;Parent=MS.gene063876 |
| chr8.1 | exon | 61984669 | 61984969 | 61984669 | ID=MS.gene063876.t1.exon1;Parent=MS.gene063876.t1 |
| chr8.1 | CDS | 61984669 | 61984969 | 61984669 | ID=cds.MS.gene063876.t1;Parent=MS.gene063876.t1 |
| chr8.1 | exon | 61986377 | 61986411 | 61986377 | ID=MS.gene063876.t1.exon2;Parent=MS.gene063876.t1 |
| chr8.1 | CDS | 61986377 | 61986411 | 61986377 | ID=cds.MS.gene063876.t1;Parent=MS.gene063876.t1 |
| Gene Sequence |
| Protein sequence |
