Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073045.t1 | XP_003603580.1 | 81.8 | 303 | 46 | 4 | 1 | 302 | 1 | 295 | 9.30E-123 | 449.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073045.t1 | Q6H500 | 49.1 | 163 | 80 | 2 | 58 | 218 | 53 | 214 | 1.3e-27 | 125.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073045.t1 | G7J2W2 | 81.8 | 303 | 46 | 4 | 1 | 302 | 1 | 295 | 6.7e-123 | 449.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene073045.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene073045 | -0.821973 | 3.04E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene073045 | -0.837857 | 4.06E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene073045 | -0.824053 | 9.94E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene073045 | -0.837417 | 5.26E-57 | -1.69E-46 |
| MS.gene049320 | MS.gene073045 | -0.843911 | 1.05E-58 | -1.69E-46 |
| MS.gene049627 | MS.gene073045 | -0.805324 | 1.41E-49 | -1.69E-46 |
| MS.gene050163 | MS.gene073045 | -0.857174 | 1.95E-62 | -1.69E-46 |
| MS.gene050165 | MS.gene073045 | -0.855787 | 4.99E-62 | -1.69E-46 |
| MS.gene050333 | MS.gene073045 | -0.806435 | 8.24E-50 | -1.69E-46 |
| MS.gene050353 | MS.gene073045 | 0.849311 | 3.51E-60 | -1.69E-46 |
| MS.gene050504 | MS.gene073045 | -0.856393 | 3.32E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene073045 | -0.825676 | 4.12E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene073045 | -0.833458 | 5.27E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene073045 | -0.815243 | 1.02E-51 | -1.69E-46 |
| MS.gene050832 | MS.gene073045 | 0.814565 | 1.44E-51 | -1.69E-46 |
| MS.gene050833 | MS.gene073045 | 0.816867 | 4.43E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene073045 | -0.822312 | 2.53E-53 | -1.69E-46 |
| MS.gene05100 | MS.gene073045 | -0.82331 | 1.48E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene073045 | -0.808649 | 2.79E-50 | -1.69E-46 |
| MS.gene051579 | MS.gene073045 | 0.839531 | 1.50E-57 | -1.69E-46 |
| MS.gene051810 | MS.gene073045 | -0.820352 | 7.18E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene073045 | -0.806171 | 9.37E-50 | -1.69E-46 |
| MS.gene053286 | MS.gene073045 | -0.804492 | 2.11E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene073045 | -0.810351 | 1.20E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene073045 | -0.834557 | 2.80E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene073045 | -0.815335 | 9.75E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene073045 | -0.832764 | 7.85E-56 | -1.69E-46 |
| MS.gene055154 | MS.gene073045 | 0.816247 | 6.10E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene073045 | -0.83547 | 1.65E-56 | -1.69E-46 |
| MS.gene055502 | MS.gene073045 | -0.832223 | 1.07E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene073045 | -0.802406 | 5.70E-49 | -1.69E-46 |
| MS.gene055956 | MS.gene073045 | 0.807888 | 4.06E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene073045 | -0.803207 | 3.89E-49 | -1.69E-46 |
| MS.gene056550 | MS.gene073045 | 0.864515 | 1.15E-64 | -1.69E-46 |
| MS.gene056657 | MS.gene073045 | -0.829447 | 5.12E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene073045 | -0.832364 | 9.86E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene073045 | -0.816202 | 6.25E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene073045 | -0.834827 | 2.39E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene073045 | -0.849511 | 3.09E-60 | -1.69E-46 |
| MS.gene059479 | MS.gene073045 | 0.808426 | 3.11E-50 | -1.69E-46 |
| MS.gene059677 | MS.gene073045 | -0.869952 | 2.10E-66 | -1.69E-46 |
| MS.gene059718 | MS.gene073045 | -0.820584 | 6.35E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene073045 | -0.803649 | 3.15E-49 | -1.69E-46 |
| MS.gene060337 | MS.gene073045 | 0.818871 | 1.56E-52 | -1.69E-46 |
| MS.gene060694 | MS.gene073045 | 0.806593 | 7.63E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene073045 | -0.802342 | 5.87E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene073045 | -0.81944 | 1.16E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene073045 | -0.817928 | 2.56E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene073045 | -0.802861 | 4.59E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073045.t1 | MTR_3g109310 | 89.109 | 303 | 24 | 4 | 1 | 302 | 1 | 295 | 0.0 | 543 |
| MS.gene073045.t1 | MTR_1g008990 | 57.383 | 298 | 102 | 12 | 21 | 302 | 51 | 339 | 2.98e-84 | 257 |
| MS.gene073045.t1 | MTR_1g008990 | 62.437 | 197 | 57 | 6 | 21 | 202 | 51 | 245 | 5.82e-59 | 189 |
| MS.gene073045.t1 | MTR_3g110010 | 81.746 | 126 | 23 | 0 | 132 | 257 | 633 | 758 | 2.59e-55 | 191 |
| MS.gene073045.t1 | MTR_3g109982 | 80.952 | 126 | 24 | 0 | 132 | 257 | 649 | 774 | 7.70e-55 | 190 |
| MS.gene073045.t1 | MTR_1g080920 | 48.611 | 144 | 67 | 4 | 98 | 238 | 177 | 316 | 1.11e-22 | 97.4 |
| MS.gene073045.t1 | MTR_7g115120 | 50.000 | 138 | 62 | 3 | 78 | 215 | 150 | 280 | 2.49e-21 | 93.2 |
| MS.gene073045.t1 | MTR_7g115140 | 41.322 | 121 | 69 | 1 | 80 | 200 | 88 | 206 | 5.16e-18 | 81.3 |
| MS.gene073045.t1 | MTR_1g022495 | 32.203 | 118 | 80 | 0 | 100 | 217 | 2 | 119 | 1.23e-12 | 65.1 |
| MS.gene073045.t1 | MTR_8g015250 | 40.426 | 94 | 53 | 1 | 123 | 216 | 69 | 159 | 8.80e-11 | 60.5 |
| MS.gene073045.t1 | MTR_4g070860 | 35.484 | 93 | 60 | 0 | 115 | 207 | 17 | 109 | 8.90e-11 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073045.t1 | AT5G24800 | 45.148 | 237 | 102 | 9 | 73 | 302 | 62 | 277 | 1.91e-45 | 155 |
| MS.gene073045.t1 | AT5G28770 | 48.175 | 137 | 65 | 3 | 102 | 238 | 122 | 252 | 1.42e-19 | 87.4 |
| MS.gene073045.t1 | AT5G28770 | 48.175 | 137 | 65 | 3 | 102 | 238 | 129 | 259 | 1.47e-19 | 87.4 |
| MS.gene073045.t1 | AT5G28770 | 52.000 | 100 | 46 | 1 | 102 | 201 | 129 | 226 | 1.38e-15 | 75.5 |
| MS.gene073045.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 221 | 313 | 2.37e-13 | 70.5 |
| MS.gene073045.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 221 | 313 | 2.53e-13 | 70.5 |
| MS.gene073045.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 215 | 307 | 2.71e-13 | 70.1 |
| MS.gene073045.t1 | AT4G02640 | 47.917 | 96 | 47 | 1 | 126 | 221 | 215 | 307 | 3.05e-13 | 70.1 |
| MS.gene073045.t1 | AT3G54620 | 46.429 | 84 | 45 | 0 | 126 | 209 | 229 | 312 | 5.22e-11 | 63.2 |
Find 66 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCTCAGCCATCTATTTA+TGG | 0.124761 | 3.3:+89438199 | MS.gene073045:CDS |
| TTTGGTTTATTAGCTGAAAC+TGG | 0.195300 | 3.3:-89438332 | None:intergenic |
| AACACTATACAAACAGTTTA+TGG | 0.233451 | 3.3:+89438892 | MS.gene073045:CDS |
| TTTGACAGAAATACCTTCTA+TGG | 0.244115 | 3.3:-89438466 | None:intergenic |
| CTATGAGTTGTGTAAATATT+TGG | 0.245467 | 3.3:+89439362 | MS.gene073045:CDS |
| ATATTATTCTCTTTGTTGTT+TGG | 0.273240 | 3.3:-89438350 | None:intergenic |
| AGTTTACCGGTAGGAGAGTT+TGG | 0.295352 | 3.3:-89435420 | None:intergenic |
| AATTCGAATCTTGCTGGGTT+TGG | 0.309808 | 3.3:+89439286 | MS.gene073045:CDS |
| TCTTGCTGGGTTTGGAAACT+TGG | 0.316743 | 3.3:+89439294 | MS.gene073045:CDS |
| GTGCACAATTCGAATCTTGC+TGG | 0.321584 | 3.3:+89439280 | MS.gene073045:CDS |
| AGCACTGATGGTGGAATGTT+TGG | 0.379902 | 3.3:-89438170 | None:intergenic |
| AATGTTTGGGAGTGAAGTTT+TGG | 0.394976 | 3.3:-89438156 | None:intergenic |
| ATTTCCCTGCAGGACATTGA+TGG | 0.400011 | 3.3:-89439224 | None:intergenic |
| ATGTGGCATGCGGCGAATAC+TGG | 0.408973 | 3.3:-89439191 | None:intergenic |
| TGAATCTCGATTACGAGTTT+CGG | 0.410788 | 3.3:+89435341 | MS.gene073045:CDS |
| ACAATGATGTCGTCGACAAT+GGG | 0.419225 | 3.3:+89439326 | MS.gene073045:CDS |
| TTGATATGAAACGCCATAGA+AGG | 0.425277 | 3.3:+89438453 | MS.gene073045:CDS |
| GGTGAAGTTAGCTGAGGATA+TGG | 0.427027 | 3.3:+89439078 | MS.gene073045:intron |
| TTTGTCTGAACTTGAGTCTC+AGG | 0.431765 | 3.3:+89438622 | MS.gene073045:CDS |
| AACCGCAACACCACCGTATG+AGG | 0.448822 | 3.3:-89439254 | None:intergenic |
| TCCGACGAGGATAATGAATC+AGG | 0.453955 | 3.3:+89438404 | MS.gene073045:CDS |
| GTATCCAAGTCTTGCCGATA+CGG | 0.463283 | 3.3:+89435363 | MS.gene073045:CDS |
| CAGCCATCTATTTATGGCAC+TGG | 0.467277 | 3.3:+89438205 | MS.gene073045:CDS |
| GCCAACCATCAATGTCCTGC+AGG | 0.476677 | 3.3:+89439219 | MS.gene073045:CDS |
| ATACCAGTGCCATAAATAGA+TGG | 0.477311 | 3.3:-89438208 | None:intergenic |
| TGCACAATTCGAATCTTGCT+GGG | 0.484135 | 3.3:+89439281 | MS.gene073045:CDS |
| ACAAAGAGAATAATATCAAA+GGG | 0.493368 | 3.3:+89438357 | MS.gene073045:CDS |
| CACAACTCATAGCATTGCTT+AGG | 0.501122 | 3.3:-89439351 | None:intergenic |
| TACAATGATGTCGTCGACAA+TGG | 0.501669 | 3.3:+89439325 | MS.gene073045:CDS |
| CCCTGCAGGACATTGATGGT+TGG | 0.501779 | 3.3:-89439220 | None:intergenic |
| CGCTTTCCAAACTCTCCTAC+CGG | 0.524112 | 3.3:+89435414 | MS.gene073045:CDS |
| GCCTCCGTATCGGCAAGACT+TGG | 0.526307 | 3.3:-89435367 | None:intergenic |
| TTGTCGACGACATCATTGTA+AGG | 0.529396 | 3.3:-89439322 | None:intergenic |
| TTGGTTTATTAGCTGAAACT+GGG | 0.535446 | 3.3:-89438331 | None:intergenic |
| AGGCACTATTATTTCCCTGC+AGG | 0.536074 | 3.3:-89439234 | None:intergenic |
| GCACTGATGGTGGAATGTTT+GGG | 0.539183 | 3.3:-89438169 | None:intergenic |
| TGTAGAAGCTTTGAGAGCTA+AGG | 0.540256 | 3.3:+89438970 | MS.gene073045:CDS |
| AACAAAGAGAATAATATCAA+AGG | 0.546304 | 3.3:+89438356 | MS.gene073045:CDS |
| GGAAATAATAGTGCCTCATA+CGG | 0.548614 | 3.3:+89439241 | MS.gene073045:CDS |
| GATACGGAGGCATTCATGAC+CGG | 0.550151 | 3.3:+89435379 | MS.gene073045:CDS |
| GTGAGTCAGCCAAGAGGTCA+AGG | 0.556802 | 3.3:+89438582 | MS.gene073045:CDS |
| ACCTGATTCATTATCCTCGT+CGG | 0.562154 | 3.3:-89438405 | None:intergenic |
| AGAATCAATAGTAGCACTGA+TGG | 0.570342 | 3.3:-89438182 | None:intergenic |
| AAACTGATTGTTTAGTGATG+TGG | 0.571542 | 3.3:-89439119 | None:intergenic |
| CCGGCGAGCGATGGCAACAA+CGG | 0.577221 | 3.3:+89435297 | None:intergenic |
| ATCAATAGTAGCACTGATGG+TGG | 0.581341 | 3.3:-89438179 | None:intergenic |
| GATTCATTATCCTCGTCGGA+TGG | 0.582930 | 3.3:-89438401 | None:intergenic |
| GAAAGCGGCGGAGCAAACTC+CGG | 0.584176 | 3.3:-89435398 | None:intergenic |
| GGTCATGAATGCCTCCGTAT+CGG | 0.589824 | 3.3:-89435377 | None:intergenic |
| TCATACGGTGGTGTTGCGGT+TGG | 0.590129 | 3.3:+89439256 | MS.gene073045:CDS |
| AATATCAAAGGGACATCAAG+TGG | 0.598499 | 3.3:+89438368 | MS.gene073045:CDS |
| TGCCTCATACGGTGGTGTTG+CGG | 0.602335 | 3.3:+89439252 | MS.gene073045:CDS |
| AATAATAGTGCCTCATACGG+TGG | 0.620063 | 3.3:+89439244 | MS.gene073045:CDS |
| TCCAAGTCTTGCCGATACGG+AGG | 0.642233 | 3.3:+89435366 | MS.gene073045:CDS |
| CCAACCATCAATGTCCTGCA+GGG | 0.644784 | 3.3:+89439220 | MS.gene073045:CDS |
| TACTAGTCAACAATTTCATG+AGG | 0.659476 | 3.3:+89438916 | MS.gene073045:CDS |
| TAGGAGAGTTTGGAAAGCGG+CGG | 0.671217 | 3.3:-89435410 | None:intergenic |
| ATAATAGGTGAAGTTAGCTG+AGG | 0.671237 | 3.3:+89439072 | MS.gene073045:intron |
| AGTCAGCCAAGAGGTCAAGG+TGG | 0.672836 | 3.3:+89438585 | MS.gene073045:CDS |
| CGGTAGGAGAGTTTGGAAAG+CGG | 0.687279 | 3.3:-89435413 | None:intergenic |
| CTGGTAGTCATGTTGAGTTG+TGG | 0.702154 | 3.3:-89439172 | None:intergenic |
| CTAATTGTGAGTCAGCCAAG+AGG | 0.709587 | 3.3:+89438576 | MS.gene073045:CDS |
| TTCATCTGATCCATCCGACG+AGG | 0.710432 | 3.3:+89438391 | MS.gene073045:CDS |
| TTGGCGAAACATGTGGCATG+CGG | 0.727060 | 3.3:-89439201 | None:intergenic |
| CAATGATGTCGTCGACAATG+GGG | 0.731606 | 3.3:+89439327 | MS.gene073045:CDS |
| TTGATGGTTGGCGAAACATG+TGG | 0.736785 | 3.3:-89439208 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTAAATTTCAAAATAAAAA+AGG | + | chr3.3:89436615-89436634 | MS.gene073045:intron | 10.0% |
| !! | AATATAACAATTGTTATGAA+GGG | + | chr3.3:89436546-89436565 | MS.gene073045:intron | 15.0% |
| !! | ACAAATAGAGTTAAATTTAT+AGG | - | chr3.3:89435647-89435666 | None:intergenic | 15.0% |
| !! | ATAAAGGAAAATGAATTTAT+TGG | + | chr3.3:89436286-89436305 | MS.gene073045:intron | 15.0% |
| !! | CTAAAATAAATTCTTCTTAA+GGG | - | chr3.3:89438032-89438051 | None:intergenic | 15.0% |
| !! | TATTAGTAGTATAATATTAG+TGG | + | chr3.3:89436077-89436096 | MS.gene073045:intron | 15.0% |
| !! | TTAATATAATTAATCTCGTT+AGG | + | chr3.3:89437027-89437046 | MS.gene073045:intron | 15.0% |
| !! | TTTACATATGCTATTATAAT+AGG | + | chr3.3:89439057-89439076 | MS.gene073045:intron | 15.0% |
| !!! | CTCTTGTTTATTTTTTTTTT+TGG | - | chr3.3:89437075-89437094 | None:intergenic | 15.0% |
| !!! | TCTAAAACTTATAAATTGAT+TGG | - | chr3.3:89436367-89436386 | None:intergenic | 15.0% |
| !!! | TCTAAAATAAATTCTTCTTA+AGG | - | chr3.3:89438033-89438052 | None:intergenic | 15.0% |
| !!! | TGAATTTCATTTTTTTTTGA+GGG | - | chr3.3:89437205-89437224 | None:intergenic | 15.0% |
| !!! | TTGAATTTCATTTTTTTTTG+AGG | - | chr3.3:89437206-89437225 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTTTTAAAGCAAA+CGG | + | chr3.3:89436884-89436903 | MS.gene073045:intron | 15.0% |
| !!! | TTTTATTTTATTTGAAGACA+TGG | - | chr3.3:89435607-89435626 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTAAGAAATGAAG+AGG | + | chr3.3:89437553-89437572 | MS.gene073045:intron | 15.0% |
| !! | AAAAACTATAAACTACTAGT+AGG | + | chr3.3:89437324-89437343 | MS.gene073045:intron | 20.0% |
| !! | AAAACTATAAACTACTAGTA+GGG | + | chr3.3:89437325-89437344 | MS.gene073045:intron | 20.0% |
| !! | AAAGAATATTAATCTTGTGT+AGG | - | chr3.3:89436115-89436134 | None:intergenic | 20.0% |
| !! | AACAAAAAATACTATATGGT+TGG | + | chr3.3:89437794-89437813 | MS.gene073045:intron | 20.0% |
| !! | AACAAAGAGAATAATATCAA+AGG | + | chr3.3:89438356-89438375 | MS.gene073045:CDS | 20.0% |
| !! | ACAAAGAGAATAATATCAAA+GGG | + | chr3.3:89438357-89438376 | MS.gene073045:CDS | 20.0% |
| !! | AGATTAATATTCTTTGCATT+CGG | + | chr3.3:89436120-89436139 | MS.gene073045:intron | 20.0% |
| !! | ATATAACAATTGTTATGAAG+GGG | + | chr3.3:89436547-89436566 | MS.gene073045:intron | 20.0% |
| !! | CAACAACAAAAAATACTATA+TGG | + | chr3.3:89437790-89437809 | MS.gene073045:intron | 20.0% |
| !! | GAATATAACAATTGTTATGA+AGG | + | chr3.3:89436545-89436564 | MS.gene073045:intron | 20.0% |
| !!! | AAACTTTAAAAGATACTACA+TGG | + | chr3.3:89437761-89437780 | MS.gene073045:intron | 20.0% |
| !!! | AAATTAATAGTTTTACACTG+TGG | - | chr3.3:89437262-89437281 | None:intergenic | 20.0% |
| !!! | AATCAAATACATCAGTTTTT+TGG | + | chr3.3:89435783-89435802 | MS.gene073045:intron | 20.0% |
| !!! | AATTTAGTTTCTGAAATTGT+AGG | + | chr3.3:89438672-89438691 | MS.gene073045:intron | 20.0% |
| !!! | ATATTATTCTCTTTGTTGTT+TGG | - | chr3.3:89438353-89438372 | None:intergenic | 20.0% |
| !!! | CATATAGTATTTTTTGTTGT+TGG | - | chr3.3:89437792-89437811 | None:intergenic | 20.0% |
| !!! | GATTCTTATTCAAATTTTTG+AGG | - | chr3.3:89437383-89437402 | None:intergenic | 20.0% |
| !!! | TACTAGGTTTATCATTTTTT+TGG | + | chr3.3:89436977-89436996 | MS.gene073045:intron | 20.0% |
| !!! | TGTTTTTTTTTAAAGCAAAC+GGG | + | chr3.3:89436885-89436904 | MS.gene073045:intron | 20.0% |
| !!! | TTAATAGAGAAAGTTTTACA+CGG | + | chr3.3:89437113-89437132 | MS.gene073045:intron | 20.0% |
| !!! | TTAGTGTCTTATTATTTACT+AGG | + | chr3.3:89436961-89436980 | MS.gene073045:intron | 20.0% |
| ! | AACACTATACAAACAGTTTA+TGG | + | chr3.3:89438892-89438911 | MS.gene073045:CDS | 25.0% |
| ! | ACAACACTTCTTATTATATG+TGG | + | chr3.3:89438505-89438524 | MS.gene073045:intron | 25.0% |
| ! | ACTCTATTTGTTTAGTAAGT+TGG | + | chr3.3:89435656-89435675 | MS.gene073045:intron | 25.0% |
| ! | AGATTCTTGGCATTAAAAAA+AGG | - | chr3.3:89436034-89436053 | None:intergenic | 25.0% |
| ! | AGTAGTATAATATTAGTGGT+GGG | + | chr3.3:89436081-89436100 | MS.gene073045:intron | 25.0% |
| ! | ATGACTCTTCAAATGAATAA+AGG | + | chr3.3:89436270-89436289 | MS.gene073045:intron | 25.0% |
| ! | ATTGAGATATATGAGAGAAA+GGG | + | chr3.3:89435819-89435838 | MS.gene073045:intron | 25.0% |
| ! | CAATTCTTCAAATGTAACTT+AGG | - | chr3.3:89436410-89436429 | None:intergenic | 25.0% |
| ! | CTATGAGTTGTGTAAATATT+TGG | + | chr3.3:89439362-89439381 | MS.gene073045:CDS | 25.0% |
| ! | CTCAACTTGAAAAATGTATA+TGG | + | chr3.3:89437738-89437757 | MS.gene073045:intron | 25.0% |
| ! | TAGTAGTATAATATTAGTGG+TGG | + | chr3.3:89436080-89436099 | MS.gene073045:intron | 25.0% |
| ! | TATAACAATTGTTATGAAGG+GGG | + | chr3.3:89436548-89436567 | MS.gene073045:intron | 25.0% |
| ! | TCTCAATTTCATTTGATAGA+TGG | - | chr3.3:89437410-89437429 | None:intergenic | 25.0% |
| ! | TGAGAGATCAAAATTCAAAT+GGG | - | chr3.3:89438845-89438864 | None:intergenic | 25.0% |
| ! | TTAATCAACGTTTATATCTC+TGG | + | chr3.3:89436324-89436343 | MS.gene073045:intron | 25.0% |
| ! | TTATTCATTTGAAGAGTCAT+GGG | - | chr3.3:89436270-89436289 | None:intergenic | 25.0% |
| ! | TTTATTCATTTGAAGAGTCA+TGG | - | chr3.3:89436271-89436290 | None:intergenic | 25.0% |
| !! | ATACATGTAGTTTGACATTT+TGG | + | chr3.3:89438280-89438299 | MS.gene073045:intron | 25.0% |
| !! | ATTTTGGATTGAATTGCATA+TGG | + | chr3.3:89438296-89438315 | MS.gene073045:intron | 25.0% |
| !! | CGAAATTAATATAAAGGTAC+AGG | + | chr3.3:89437351-89437370 | MS.gene073045:intron | 25.0% |
| !! | CTTTAAAAAAAAACAACGAC+CGG | - | chr3.3:89436880-89436899 | None:intergenic | 25.0% |
| !! | TAATTCTGAGAGAAAATTCT+AGG | + | chr3.3:89438740-89438759 | MS.gene073045:intron | 25.0% |
| !! | TGGAAATTTTGCTTAAAAGA+GGG | + | chr3.3:89435848-89435867 | MS.gene073045:intron | 25.0% |
| !! | TTGGAAATTTTGCTTAAAAG+AGG | + | chr3.3:89435847-89435866 | MS.gene073045:intron | 25.0% |
| !!! | AAGTTTGTTCTTGTTATTTC+CGG | - | chr3.3:89435570-89435589 | None:intergenic | 25.0% |
| !!! | AGACTCTTTTTTTTCATTTG+AGG | - | chr3.3:89436241-89436260 | None:intergenic | 25.0% |
| !!! | AGTTTTTTGGCTGATAATTT+GGG | + | chr3.3:89435796-89435815 | MS.gene073045:intron | 25.0% |
| !!! | ATACATTTTTCAAGTTGAGT+TGG | - | chr3.3:89437737-89437756 | None:intergenic | 25.0% |
| !!! | GACTCTTTTTTTTCATTTGA+GGG | - | chr3.3:89436240-89436259 | None:intergenic | 25.0% |
| !!! | GGGTATCGAAATTAATATAA+AGG | + | chr3.3:89437345-89437364 | MS.gene073045:intron | 25.0% |
| !!! | TATTCAAATTTTTGAGGTCT+TGG | - | chr3.3:89437377-89437396 | None:intergenic | 25.0% |
| AAACTGATTGTTTAGTGATG+TGG | - | chr3.3:89439122-89439141 | None:intergenic | 30.0% | |
| AACGTTTATATCTCTGGTTA+GGG | + | chr3.3:89436330-89436349 | MS.gene073045:intron | 30.0% | |
| AATGTCAAACTACATGTATG+AGG | - | chr3.3:89438279-89438298 | None:intergenic | 30.0% | |
| AGAAATCAAGACAAGATTCT+TGG | - | chr3.3:89436047-89436066 | None:intergenic | 30.0% | |
| ATATTTGTACGACTATAGCT+TGG | - | chr3.3:89436215-89436234 | None:intergenic | 30.0% | |
| ATCACTTCATCAAATCACAT+AGG | - | chr3.3:89437956-89437975 | None:intergenic | 30.0% | |
| ATTATATAACCATTCTCTCG+TGG | - | chr3.3:89436475-89436494 | None:intergenic | 30.0% | |
| CATGCTTCAATTGAAATAGT+AGG | - | chr3.3:89438769-89438788 | None:intergenic | 30.0% | |
| CTGAGAGATCAAAATTCAAA+TGG | - | chr3.3:89438846-89438865 | None:intergenic | 30.0% | |
| GATCAATTATGTGTAATCGT+TGG | - | chr3.3:89437240-89437259 | None:intergenic | 30.0% | |
| GATTGAGATATATGAGAGAA+AGG | + | chr3.3:89435818-89435837 | MS.gene073045:intron | 30.0% | |
| GCTCACAAAAAATCTTCATA+AGG | - | chr3.3:89435931-89435950 | None:intergenic | 30.0% | |
| TACTAGTCAACAATTTCATG+AGG | + | chr3.3:89438916-89438935 | MS.gene073045:CDS | 30.0% | |
| TATAGAGACAGATTGTAAGA+CGG | + | chr3.3:89437675-89437694 | MS.gene073045:intron | 30.0% | |
| TGATATAATGATTCGTGACA+TGG | + | chr3.3:89438539-89438558 | MS.gene073045:intron | 30.0% | |
| TTGAACGAAAACCTAAAGTA+GGG | + | chr3.3:89435892-89435911 | MS.gene073045:intron | 30.0% | |
| TTGGTTTATTAGCTGAAACT+GGG | - | chr3.3:89438334-89438353 | None:intergenic | 30.0% | |
| TTTGACAGAAATACCTTCTA+TGG | - | chr3.3:89438469-89438488 | None:intergenic | 30.0% | |
| ! | CAGGTAACTAATCAATGTTT+TGG | + | chr3.3:89438641-89438660 | MS.gene073045:intron | 30.0% |
| ! | GGAAATTTTGCTTAAAAGAG+GGG | + | chr3.3:89435849-89435868 | MS.gene073045:intron | 30.0% |
| ! | TTTGGTTTATTAGCTGAAAC+TGG | - | chr3.3:89438335-89438354 | None:intergenic | 30.0% |
| ! | TTTTGTGAGCAAAAAAGACT+TGG | + | chr3.3:89435941-89435960 | MS.gene073045:intron | 30.0% |
| !! | CATTTGAATTTTGATCTCTC+AGG | + | chr3.3:89438844-89438863 | MS.gene073045:intron | 30.0% |
| !! | TAGTTTCTGAAATTGTAGGT+AGG | + | chr3.3:89438676-89438695 | MS.gene073045:intron | 30.0% |
| !! | TGTGTAAATATTTGGCCTTA+AGG | + | chr3.3:89439370-89439389 | MS.gene073045:CDS | 30.0% |
| !!! | CAGTTTTTTGGCTGATAATT+TGG | + | chr3.3:89435795-89435814 | MS.gene073045:intron | 30.0% |
| AAAAATGATCCACGAGAGAA+TGG | + | chr3.3:89436463-89436482 | MS.gene073045:intron | 35.0% | |
| AAAACCTAAAGTAGGGATGT+GGG | + | chr3.3:89435899-89435918 | MS.gene073045:intron | 35.0% | |
| AATATCAAAGGGACATCAAG+TGG | + | chr3.3:89438368-89438387 | MS.gene073045:CDS | 35.0% | |
| ACTTTGTAACATCCATGTGA+AGG | + | chr3.3:89437976-89437995 | MS.gene073045:intron | 35.0% | |
| AGAAAGAGAGAAGAGTTTAC+CGG | - | chr3.3:89435436-89435455 | None:intergenic | 35.0% | |
| ATAATAGGTGAAGTTAGCTG+AGG | + | chr3.3:89439072-89439091 | MS.gene073045:intron | 35.0% | |
| ATACCAGTGCCATAAATAGA+TGG | - | chr3.3:89438211-89438230 | None:intergenic | 35.0% | |
| CAACGTTTATATCTCTGGTT+AGG | + | chr3.3:89436329-89436348 | MS.gene073045:intron | 35.0% | |
| CACAATTTGATATCTCATGC+AGG | + | chr3.3:89438702-89438721 | MS.gene073045:intron | 35.0% | |
| CATGAAAAGGTTACATAAGC+TGG | - | chr3.3:89438080-89438099 | None:intergenic | 35.0% | |
| CCTGCTATTCAATCATGAAA+AGG | - | chr3.3:89438093-89438112 | None:intergenic | 35.0% | |
| CGAATGAATACTTCAAGACT+AGG | + | chr3.3:89437285-89437304 | MS.gene073045:intron | 35.0% | |
| CTTTGTAACATCCATGTGAA+GGG | + | chr3.3:89437977-89437996 | MS.gene073045:intron | 35.0% | |
| GATTCTCAGCCATCTATTTA+TGG | + | chr3.3:89438199-89438218 | MS.gene073045:CDS | 35.0% | |
| GGAAATAATAGTGCCTCATA+CGG | + | chr3.3:89439241-89439260 | MS.gene073045:CDS | 35.0% | |
| GTTGAACGAAAACCTAAAGT+AGG | + | chr3.3:89435891-89435910 | MS.gene073045:intron | 35.0% | |
| TAAAAGAGGGGAAGTGAAAA+AGG | + | chr3.3:89435861-89435880 | MS.gene073045:intron | 35.0% | |
| TGAATCTCGATTACGAGTTT+CGG | + | chr3.3:89435341-89435360 | MS.gene073045:CDS | 35.0% | |
| TGAGCACATCATTTATGTAG+AGG | + | chr3.3:89437828-89437847 | MS.gene073045:intron | 35.0% | |
| TTGATATGAAACGCCATAGA+AGG | + | chr3.3:89438453-89438472 | MS.gene073045:CDS | 35.0% | |
| ! | AATGTTTGGGAGTGAAGTTT+TGG | - | chr3.3:89438159-89438178 | None:intergenic | 35.0% |
| ! | AGAATCAATAGTAGCACTGA+TGG | - | chr3.3:89438185-89438204 | None:intergenic | 35.0% |
| ! | AGTTCATTTTCAACTTGTGG+TGG | + | chr3.3:89438121-89438140 | MS.gene073045:CDS | 35.0% |
| ! | ATGTTTGGGAGTGAAGTTTT+GGG | - | chr3.3:89438158-89438177 | None:intergenic | 35.0% |
| ! | CCTTTTCATGATTGAATAGC+AGG | + | chr3.3:89438090-89438109 | MS.gene073045:intron | 35.0% |
| ! | GTGAGTTCATTTTCAACTTG+TGG | + | chr3.3:89438118-89438137 | MS.gene073045:CDS | 35.0% |
| ! | TAGAGAAAGTTTTACACGGT+CGG | + | chr3.3:89437117-89437136 | MS.gene073045:intron | 35.0% |
| ! | TTTGAGACAATTTCTCATGC+AGG | + | chr3.3:89437592-89437611 | MS.gene073045:intron | 35.0% |
| !! | ATTTATGGCACTGGTATGTA+TGG | + | chr3.3:89438214-89438233 | MS.gene073045:intron | 35.0% |
| !! | CTACATCTGATTTTAGCACT+CGG | - | chr3.3:89438955-89438974 | None:intergenic | 35.0% |
| !! | CTCTCGTGGATCATTTTTAT+TGG | - | chr3.3:89436461-89436480 | None:intergenic | 35.0% |
| !! | GAATACTGATAGCGTGTTTT+TGG | - | chr3.3:89437625-89437644 | None:intergenic | 35.0% |
| AATAATAGTGCCTCATACGG+TGG | + | chr3.3:89439244-89439263 | MS.gene073045:CDS | 40.0% | |
| AATGCACTCCTAACGTAAAC+CGG | + | chr3.3:89436858-89436877 | MS.gene073045:intron | 40.0% | |
| ACAATGATGTCGTCGACAAT+GGG | + | chr3.3:89439326-89439345 | MS.gene073045:CDS | 40.0% | |
| ACCTGATTCATTATCCTCGT+CGG | - | chr3.3:89438408-89438427 | None:intergenic | 40.0% | |
| ATTCGTGACATGGTTTCAGA+AGG | + | chr3.3:89438549-89438568 | MS.gene073045:intron | 40.0% | |
| CACAACTCATAGCATTGCTT+AGG | - | chr3.3:89439354-89439373 | None:intergenic | 40.0% | |
| CTTTAAATTCAAGCAGCCGT+TGG | + | chr3.3:89436147-89436166 | MS.gene073045:intron | 40.0% | |
| GAAAACCTAAAGTAGGGATG+TGG | + | chr3.3:89435898-89435917 | MS.gene073045:intron | 40.0% | |
| GAGATATATGAGAGAAAGGG+AGG | + | chr3.3:89435822-89435841 | MS.gene073045:intron | 40.0% | |
| TACAATGATGTCGTCGACAA+TGG | + | chr3.3:89439325-89439344 | MS.gene073045:CDS | 40.0% | |
| TAGTGTGAACGCATGACTTT+GGG | + | chr3.3:89436000-89436019 | MS.gene073045:intron | 40.0% | |
| TCTAAGTTCCACCAATCCAA+CGG | - | chr3.3:89436166-89436185 | None:intergenic | 40.0% | |
| TGAATTGCATATGGAGCAGT+TGG | + | chr3.3:89438305-89438324 | MS.gene073045:intron | 40.0% | |
| TGAGGAATGTTGAGATGTGT+AGG | - | chr3.3:89438261-89438280 | None:intergenic | 40.0% | |
| TGCACAATTCGAATCTTGCT+GGG | + | chr3.3:89439281-89439300 | MS.gene073045:CDS | 40.0% | |
| TGTGAGCAAAAAAGACTTGG+TGG | + | chr3.3:89435944-89435963 | MS.gene073045:intron | 40.0% | |
| TTCGTGACATGGTTTCAGAA+GGG | + | chr3.3:89438550-89438569 | MS.gene073045:intron | 40.0% | |
| TTGTCGACGACATCATTGTA+AGG | - | chr3.3:89439325-89439344 | None:intergenic | 40.0% | |
| TTTGTCTGAACTTGAGTCTC+AGG | + | chr3.3:89438622-89438641 | MS.gene073045:CDS | 40.0% | |
| ! | GTGAGCAAAAAAGACTTGGT+GGG | + | chr3.3:89435945-89435964 | MS.gene073045:intron | 40.0% |
| ! | TATGAGAGAAAGGGAGGTAT+TGG | + | chr3.3:89435828-89435847 | MS.gene073045:intron | 40.0% |
| !! | AACTGAAAGTACTGATGACG+TGG | + | chr3.3:89435498-89435517 | MS.gene073045:intron | 40.0% |
| !! | ATCAATAGTAGCACTGATGG+TGG | - | chr3.3:89438182-89438201 | None:intergenic | 40.0% |
| !! | TCAGGTTGAAAAACTGACAC+TGG | + | chr3.3:89438862-89438881 | MS.gene073045:intron | 40.0% |
| !! | TGTAGAAGCTTTGAGAGCTA+AGG | + | chr3.3:89438970-89438989 | MS.gene073045:CDS | 40.0% |
| !!! | CTCTGTTTTTACCCTTCACA+TGG | - | chr3.3:89437991-89438010 | None:intergenic | 40.0% |
| AATTCAAGCAGCCGTTGGAT+TGG | + | chr3.3:89436152-89436171 | MS.gene073045:intron | 45.0% | |
| AGAGAGAAGAGTTTACCGGT+AGG | - | chr3.3:89435432-89435451 | None:intergenic | 45.0% | |
| AGGCACTATTATTTCCCTGC+AGG | - | chr3.3:89439237-89439256 | None:intergenic | 45.0% | |
| AGTGTGAACGCATGACTTTG+GGG | + | chr3.3:89436001-89436020 | MS.gene073045:intron | 45.0% | |
| AGTTTACCGGTAGGAGAGTT+TGG | - | chr3.3:89435423-89435442 | None:intergenic | 45.0% | |
| ATTTCCCTGCAGGACATTGA+TGG | - | chr3.3:89439227-89439246 | None:intergenic | 45.0% | |
| CAATGATGTCGTCGACAATG+GGG | + | chr3.3:89439327-89439346 | MS.gene073045:CDS | 45.0% | |
| CAGCCATCTATTTATGGCAC+TGG | + | chr3.3:89438205-89438224 | MS.gene073045:CDS | 45.0% | |
| CTAATTGTGAGTCAGCCAAG+AGG | + | chr3.3:89438576-89438595 | MS.gene073045:CDS | 45.0% | |
| CTAGTGTGAACGCATGACTT+TGG | + | chr3.3:89435999-89436018 | MS.gene073045:intron | 45.0% | |
| GAGACAATTTCTCATGCAGG+AGG | + | chr3.3:89437595-89437614 | MS.gene073045:intron | 45.0% | |
| GATTCATTATCCTCGTCGGA+TGG | - | chr3.3:89438404-89438423 | None:intergenic | 45.0% | |
| GGAATCCTACCATGCAGTTT+GGG | + | chr3.3:89435519-89435538 | MS.gene073045:intron | 45.0% | |
| GGTGAAGTTAGCTGAGGATA+TGG | + | chr3.3:89439078-89439097 | MS.gene073045:intron | 45.0% | |
| GTATCCAAGTCTTGCCGATA+CGG | + | chr3.3:89435363-89435382 | MS.gene073045:CDS | 45.0% | |
| GTGCACAATTCGAATCTTGC+TGG | + | chr3.3:89439280-89439299 | MS.gene073045:CDS | 45.0% | |
| TCCGACGAGGATAATGAATC+AGG | + | chr3.3:89438404-89438423 | MS.gene073045:CDS | 45.0% | |
| TCGCTCAACGCTTACTTAAC+CGG | + | chr3.3:89435548-89435567 | MS.gene073045:intron | 45.0% | |
| TGGAATCCTACCATGCAGTT+TGG | + | chr3.3:89435518-89435537 | MS.gene073045:intron | 45.0% | |
| ! | AACAACGACCGGTTTACGTT+AGG | - | chr3.3:89436869-89436888 | None:intergenic | 45.0% |
| ! | CTGGTAGTCATGTTGAGTTG+TGG | - | chr3.3:89439175-89439194 | None:intergenic | 45.0% |
| ! | TTGATGGTTGGCGAAACATG+TGG | - | chr3.3:89439211-89439230 | None:intergenic | 45.0% |
| ! | TTTTCTCCACCTTGACCTCT+TGG | - | chr3.3:89438594-89438613 | None:intergenic | 45.0% |
| !! | AGCACTGATGGTGGAATGTT+TGG | - | chr3.3:89438173-89438192 | None:intergenic | 45.0% |
| !! | GCACTGATGGTGGAATGTTT+GGG | - | chr3.3:89438172-89438191 | None:intergenic | 45.0% |
| !!! | AATATGTTAATTTTTTTTTT+AGG | - | chr3.3:89436518-89436537 | None:intergenic | 5.0% |
| !!! | ATTTTTACTTATATATAATT+TGG | - | chr3.3:89435728-89435747 | None:intergenic | 5.0% |
| ATGAAGGGGGAGAGATAGAG+AGG | + | chr3.3:89436561-89436580 | MS.gene073045:intron | 50.0% | |
| CCAACCATCAATGTCCTGCA+GGG | + | chr3.3:89439220-89439239 | MS.gene073045:CDS | 50.0% | |
| CGCTTTCCAAACTCTCCTAC+CGG | + | chr3.3:89435414-89435433 | MS.gene073045:CDS | 50.0% | |
| CGGTAGGAGAGTTTGGAAAG+CGG | - | chr3.3:89435416-89435435 | None:intergenic | 50.0% | |
| GCAACCCACATCCCTACTTT+AGG | - | chr3.3:89435906-89435925 | None:intergenic | 50.0% | |
| GGTCATGAATGCCTCCGTAT+CGG | - | chr3.3:89435380-89435399 | None:intergenic | 50.0% | |
| GTGTGAACGCATGACTTTGG+GGG | + | chr3.3:89436002-89436021 | MS.gene073045:intron | 50.0% | |
| TAGGAGAGTTTGGAAAGCGG+CGG | - | chr3.3:89435413-89435432 | None:intergenic | 50.0% | |
| TTCATCTGATCCATCCGACG+AGG | + | chr3.3:89438391-89438410 | MS.gene073045:CDS | 50.0% | |
| TTGGCGAAACATGTGGCATG+CGG | - | chr3.3:89439204-89439223 | None:intergenic | 50.0% | |
| !! | GATACGGAGGCATTCATGAC+CGG | + | chr3.3:89435379-89435398 | MS.gene073045:CDS | 50.0% |
| AACCGCAACACCACCGTATG+AGG | - | chr3.3:89439257-89439276 | None:intergenic | 55.0% | |
| AAGGGGGAGAGATAGAGAGG+AGG | + | chr3.3:89436564-89436583 | MS.gene073045:intron | 55.0% | |
| AGGGGGAGAGATAGAGAGGA+GGG | + | chr3.3:89436565-89436584 | MS.gene073045:intron | 55.0% | |
| AGTCAGCCAAGAGGTCAAGG+TGG | + | chr3.3:89438585-89438604 | MS.gene073045:CDS | 55.0% | |
| AGTGTGAGGTAGGGAGAGAG+GGG | + | chr3.3:89436588-89436607 | MS.gene073045:intron | 55.0% | |
| ATGTGGCATGCGGCGAATAC+TGG | - | chr3.3:89439194-89439213 | None:intergenic | 55.0% | |
| CCTACCATGCAGTTTGGGTG+AGG | + | chr3.3:89435524-89435543 | MS.gene073045:intron | 55.0% | |
| CCTCACCCAAACTGCATGGT+AGG | - | chr3.3:89435527-89435546 | None:intergenic | 55.0% | |
| CGATCCTCACCCAAACTGCA+TGG | - | chr3.3:89435531-89435550 | None:intergenic | 55.0% | |
| GAGTGTGAGGTAGGGAGAGA+GGG | + | chr3.3:89436587-89436606 | MS.gene073045:intron | 55.0% | |
| GCCAACCATCAATGTCCTGC+AGG | + | chr3.3:89439219-89439238 | MS.gene073045:CDS | 55.0% | |
| GTGAGTCAGCCAAGAGGTCA+AGG | + | chr3.3:89438582-89438601 | MS.gene073045:CDS | 55.0% | |
| TCCAAGTCTTGCCGATACGG+AGG | + | chr3.3:89435366-89435385 | MS.gene073045:CDS | 55.0% | |
| ! | AACGCATGACTTTGGGGGTG+TGG | + | chr3.3:89436007-89436026 | MS.gene073045:intron | 55.0% |
| ! | ACGCATGACTTTGGGGGTGT+GGG | + | chr3.3:89436008-89436027 | MS.gene073045:intron | 55.0% |
| ! | AGAGGAGGGAGTGTGAGGTA+GGG | + | chr3.3:89436579-89436598 | MS.gene073045:intron | 55.0% |
| ! | CCCTGCAGGACATTGATGGT+TGG | - | chr3.3:89439223-89439242 | None:intergenic | 55.0% |
| ! | GATAGAGAGGAGGGAGTGTG+AGG | + | chr3.3:89436574-89436593 | MS.gene073045:intron | 55.0% |
| ! | TCAAGCAGCCGTTGGATTGG+TGG | + | chr3.3:89436155-89436174 | MS.gene073045:intron | 55.0% |
| ! | TGCCTCATACGGTGGTGTTG+CGG | + | chr3.3:89439252-89439271 | MS.gene073045:CDS | 55.0% |
| !! | TCATACGGTGGTGTTGCGGT+TGG | + | chr3.3:89439256-89439275 | MS.gene073045:CDS | 55.0% |
| GAAAGCGGCGGAGCAAACTC+CGG | - | chr3.3:89435401-89435420 | None:intergenic | 60.0% | |
| GGAGTGTGAGGTAGGGAGAG+AGG | + | chr3.3:89436586-89436605 | MS.gene073045:intron | 60.0% | |
| GTGTGAGGTAGGGAGAGAGG+GGG | + | chr3.3:89436589-89436608 | MS.gene073045:intron | 60.0% | |
| ! | GAGAGGAGGGAGTGTGAGGT+AGG | + | chr3.3:89436578-89436597 | MS.gene073045:intron | 60.0% |
| ! | GCCTCCGTATCGGCAAGACT+TGG | - | chr3.3:89435370-89435389 | None:intergenic | 60.0% |
| GAGGTAGGGAGAGAGGGGGA+GGG | + | chr3.3:89436593-89436612 | MS.gene073045:intron | 65.0% | |
| TGAGGTAGGGAGAGAGGGGG+AGG | + | chr3.3:89436592-89436611 | MS.gene073045:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 89435307 | 89439390 | 89435307 | ID=MS.gene073045 |
| chr3.3 | mRNA | 89435307 | 89439390 | 89435307 | ID=MS.gene073045.t1;Parent=MS.gene073045 |
| chr3.3 | exon | 89435307 | 89435435 | 89435307 | ID=MS.gene073045.t1.exon1;Parent=MS.gene073045.t1 |
| chr3.3 | CDS | 89435307 | 89435435 | 89435307 | ID=cds.MS.gene073045.t1;Parent=MS.gene073045.t1 |
| chr3.3 | exon | 89438112 | 89438226 | 89438112 | ID=MS.gene073045.t1.exon2;Parent=MS.gene073045.t1 |
| chr3.3 | CDS | 89438112 | 89438226 | 89438112 | ID=cds.MS.gene073045.t1;Parent=MS.gene073045.t1 |
| chr3.3 | exon | 89438324 | 89438474 | 89438324 | ID=MS.gene073045.t1.exon3;Parent=MS.gene073045.t1 |
| chr3.3 | CDS | 89438324 | 89438474 | 89438324 | ID=cds.MS.gene073045.t1;Parent=MS.gene073045.t1 |
| chr3.3 | exon | 89438568 | 89438643 | 89438568 | ID=MS.gene073045.t1.exon4;Parent=MS.gene073045.t1 |
| chr3.3 | CDS | 89438568 | 89438643 | 89438568 | ID=cds.MS.gene073045.t1;Parent=MS.gene073045.t1 |
| chr3.3 | exon | 89438866 | 89438991 | 89438866 | ID=MS.gene073045.t1.exon5;Parent=MS.gene073045.t1 |
| chr3.3 | CDS | 89438866 | 89438991 | 89438866 | ID=cds.MS.gene073045.t1;Parent=MS.gene073045.t1 |
| chr3.3 | exon | 89439079 | 89439390 | 89439079 | ID=MS.gene073045.t1.exon6;Parent=MS.gene073045.t1 |
| chr3.3 | CDS | 89439079 | 89439390 | 89439079 | ID=cds.MS.gene073045.t1;Parent=MS.gene073045.t1 |
| Gene Sequence |
| Protein sequence |
