AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene09594

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09594.t1 MTR_5g015600 96.667 1260 40 1 1 1258 1 1260 0.0 2494
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene09594.t1 AT1G64960 50.594 1263 583 10 1 1256 1 1229 0.0 1137
MS.gene09594.t1 AT1G64960 49.723 1263 565 10 1 1256 1 1200 0.0 1101

Find 238 sgRNAs with CRISPR-Local

Find 399 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATCGTTGTCACATTAAATT+TGG 0.118138 5.2:-7390145 MS.gene09594:CDS
GTAAGCATCTTTGTTATAAT+TGG 0.182037 5.2:+7391122 None:intergenic
GCTACAATCAAGGGCCATTT+TGG 0.186330 5.2:+7387741 None:intergenic
GTCGTGTCCTTCATCTATTT+TGG 0.194615 5.2:-7391160 MS.gene09594:CDS
ACATAAGTTGTTGCTTTCTT+TGG 0.204410 5.2:-7390221 MS.gene09594:CDS
AATTAAATCAAGCAAGTTAT+TGG 0.209359 5.2:+7387932 None:intergenic
GAATGCTTTGCATCTGCTTT+TGG 0.221348 5.2:-7391318 MS.gene09594:CDS
AGGGTTTGATTGAATGAATT+AGG 0.240634 5.2:+7392781 None:intergenic
AGAAGTCCTGCCACATTATC+TGG 0.262209 5.2:+7390322 None:intergenic
TGAAGTTACAATTTCCAAAA+TGG 0.266674 5.2:-7387755 MS.gene09594:CDS
CGGCGGAGGGTGGCGGTGGG+AGG 0.270236 5.2:+7392648 None:intergenic
AAGTCGATGTTGGAGGCTTA+TGG 0.282924 5.2:-7392078 MS.gene09594:CDS
TTCTTGGTTTGTTCACTTGT+TGG 0.284764 5.2:-7387570 MS.gene09594:CDS
TTTGTATATTAGAAGGGTTT+TGG 0.286758 5.2:-7391938 MS.gene09594:CDS
AGGGGTTGCTTGAACCTCTT+TGG 0.288614 5.2:-7387359 MS.gene09594:CDS
TTGGCTGCCTGATGTAGTTT+TGG 0.290932 5.2:-7387847 MS.gene09594:CDS
TTGAATGTCGAGAATTTATC+TGG 0.295429 5.2:+7387663 None:intergenic
GCATGATAATTTGATTGTTT+TGG 0.298824 5.2:-7392463 MS.gene09594:CDS
AGATCTAAAGATTGCTTTCC+TGG 0.301662 5.2:+7389949 None:intergenic
AGAGCGGCGGAGGGTGGCGG+TGG 0.302209 5.2:+7392644 None:intergenic
AGAAGATGGAAGAAAGTTTC+TGG 0.302676 5.2:-7392178 MS.gene09594:CDS
CATAAGTTGTTGCTTTCTTT+GGG 0.303041 5.2:-7390220 MS.gene09594:CDS
ATTCCACTCCTTGAATCTTC+TGG 0.303771 5.2:+7392024 None:intergenic
TGTTTCAACTGAATCATGTT+TGG 0.303846 5.2:-7387910 MS.gene09594:CDS
CATAGACATATCTCCTGTTT+TGG 0.310009 5.2:-7389849 MS.gene09594:CDS
GATTGGCGATCAACATCTTC+AGG 0.310014 5.2:+7390259 None:intergenic
GGTTCTATCCATGCAAGTTC+TGG 0.311947 5.2:-7391970 MS.gene09594:CDS
ATCGTTGTCACATTAAATTT+GGG 0.311953 5.2:-7390144 MS.gene09594:CDS
AAAATCAAAATTCCACAAAA+AGG 0.312821 5.2:-7388862 MS.gene09594:CDS
TCTTGGTTTGTTCACTTGTT+GGG 0.323357 5.2:-7387569 MS.gene09594:CDS
CACTGCAGAGAGCACAGTTT+TGG 0.325243 5.2:+7387719 None:intergenic
GGAAGAGCGGCGGAGGGTGG+CGG 0.326211 5.2:+7392641 None:intergenic
TTGATCGCCAATCTAAAATT+AGG 0.330348 5.2:-7390249 MS.gene09594:CDS
GGTCAAAGCATTCCTGAGTT+TGG 0.330640 5.2:-7390551 MS.gene09594:CDS
ACAGCAATTGTTCTAACTTC+TGG 0.331484 5.2:+7391194 None:intergenic
ATCGGATTGGGAACTGGGTT+CGG 0.345664 5.2:+7392602 None:intergenic
TCAGCTTGGGAAGGAGCTTT+TGG 0.349604 5.2:-7392133 MS.gene09594:CDS
GTTTCAACTGAATCATGTTT+GGG 0.353872 5.2:-7387909 MS.gene09594:CDS
ATTTGAAACTGTTGTTAAAC+AGG 0.356426 5.2:-7392230 MS.gene09594:CDS
AAAGTGGAAGGTTTACTAAC+TGG 0.356693 5.2:-7390400 MS.gene09594:CDS
GAGAAATTGATGCATGTAAA+GGG 0.356739 5.2:-7387378 MS.gene09594:CDS
GGGTTTGATTGAATGAATTA+GGG 0.357688 5.2:+7392782 None:intergenic
GGGTGGCGGTGGGAGGGGTT+TGG 0.362193 5.2:+7392655 None:intergenic
AATTGAGAATGGGTTCTTGC+AGG 0.370908 5.2:-7392004 MS.gene09594:CDS
CATAACTTGGAGTCAACAAC+TGG 0.378416 5.2:-7388923 MS.gene09594:CDS
ACAGTGTTACAGCTACTAAA+AGG 0.379156 5.2:-7390105 MS.gene09594:CDS
AGTCAGTGAACCATGCTATA+TGG 0.381458 5.2:-7390452 MS.gene09594:CDS
TAAGGTGCTCTGTCCAAGAC+TGG 0.381805 5.2:-7390994 MS.gene09594:CDS
GCTGCATTACACTAGTAAAA+AGG 0.383645 5.2:-7390648 MS.gene09594:CDS
CAATGTGGATTCACATAACT+TGG 0.384118 5.2:-7388936 MS.gene09594:CDS
CTTATGCAGCAGGGTTGTTA+AGG 0.385515 5.2:+7390174 None:intergenic
GCGGAGGGTGGCGGTGGGAG+GGG 0.386179 5.2:+7392650 None:intergenic
TTCTTGCAGGATTTGATTGA+GGG 0.387600 5.2:-7391991 MS.gene09594:CDS
AGGGAGTGAAGAAATGAGAT+TGG 0.390904 5.2:+7392755 None:intergenic
AAGGACTTTGAGCTGGCATT+AGG 0.391101 5.2:-7387537 MS.gene09594:CDS
TAAATGTTCACTTCCACTTT+CGG 0.391923 5.2:+7387794 None:intergenic
CTCGACATTCAATAAACTTA+CGG 0.392019 5.2:-7387652 MS.gene09594:CDS
ACGTATCATCTATATGAAAC+TGG 0.400632 5.2:-7387336 MS.gene09594:CDS
TGACATGATGTTATCTTCTC+TGG 0.402253 5.2:-7387460 MS.gene09594:CDS
TTGAGGCATCGGGATCTTCA+AGG 0.407230 5.2:+7391285 None:intergenic
TACTGCTGTTCTGAAGTTCA+TGG 0.407356 5.2:-7388207 MS.gene09594:CDS
CTGCAGTAAGTAACTCTTTG+AGG 0.407497 5.2:+7390425 None:intergenic
AGAGTATAATGGATGCAGTT+GGG 0.410082 5.2:-7387599 MS.gene09594:CDS
TTTGTTAGCTTCTGAGCTAC+AGG 0.413385 5.2:+7390727 None:intergenic
CAAAATATTGCACCGGCCAT+TGG 0.415212 5.2:+7390622 None:intergenic
CCACTCTCATGAAGTCCTTA+AGG 0.418852 5.2:-7391012 MS.gene09594:CDS
ATTAATCAGAGGACCGTAGA+TGG 0.419354 5.2:-7391907 MS.gene09594:CDS
TTGCCGAGCCAGTCATATTT+CGG 0.420764 5.2:-7391861 MS.gene09594:CDS
AGCGTCTAAAACTCATCTTA+TGG 0.421060 5.2:-7390578 MS.gene09594:CDS
CTTAACAACCCTGCTGCATA+AGG 0.424511 5.2:-7390173 MS.gene09594:CDS
TAATCGTGATGACAGGGATT+GGG 0.424973 5.2:-7387484 MS.gene09594:CDS
TCAAGGAGTGGAATTGAGAA+TGG 0.425285 5.2:-7392015 MS.gene09594:CDS
AGCTAGTAATAACGATGAAC+TGG 0.425908 5.2:-7387400 MS.gene09594:CDS
TAAAACTCATCTTATGGAAC+TGG 0.430233 5.2:-7390572 MS.gene09594:CDS
AGTCGATGTTGGAGGCTTAT+GGG 0.430569 5.2:-7392077 MS.gene09594:CDS
GGCGGAGGGTGGCGGTGGGA+GGG 0.435084 5.2:+7392649 None:intergenic
ATGCGTTTCGCATCCGAGAA+AGG 0.435129 5.2:-7392526 MS.gene09594:CDS
AGGCTATCTCTGACAAATGC+TGG 0.441732 5.2:-7388836 MS.gene09594:CDS
TCATGCAATGCTTGAACTCC+AGG 0.448812 5.2:+7392480 None:intergenic
CGATGCCTCAAAAGAGGATA+AGG 0.452469 5.2:-7391273 MS.gene09594:CDS
CAATAAACTTACGGCTATGC+TGG 0.453081 5.2:-7387643 MS.gene09594:CDS
CAGAATTGAATTTGAGGAAG+AGG 0.455907 5.2:-7388075 MS.gene09594:CDS
CTCCTCAATGGGCACTATTG+AGG 0.456844 5.2:+7390681 None:intergenic
GTTACTTACTGCAGAGAAAG+TGG 0.458246 5.2:-7390416 MS.gene09594:CDS
CCCAGTGCCAAAACTACATC+AGG 0.461018 5.2:+7387840 None:intergenic
CGATTACATGCCTCCTCAAT+GGG 0.461846 5.2:+7390670 None:intergenic
GCGATTACATGCCTCCTCAA+TGG 0.462529 5.2:+7390669 None:intergenic
TTGGGAACTGGGTTCGGTGG+TGG 0.465274 5.2:+7392608 None:intergenic
TCCTCAATGGGCACTATTGA+GGG 0.465738 5.2:+7390682 None:intergenic
GTGAATGAAGGTGAAGGATA+TGG 0.466047 5.2:-7387699 MS.gene09594:CDS
TTATATTTGAAAACAGAAGA+TGG 0.467998 5.2:-7392192 MS.gene09594:CDS
CGAGCACGTGCTCAACTGCT+TGG 0.468749 5.2:-7388996 MS.gene09594:CDS
ATCAGGCAGCCAAGGCTTTG+CGG 0.469242 5.2:+7387857 None:intergenic
ACTTGTTGGGCTAGAACAAA+AGG 0.469593 5.2:-7387556 MS.gene09594:CDS
AAGTCAGCATTGAGCATTGT+GGG 0.469732 5.2:-7389883 MS.gene09594:CDS
TGAAGAAATGAGATTGGAAG+AGG 0.470796 5.2:+7392761 None:intergenic
AGTTGTTTAATCGTGATGAC+AGG 0.474192 5.2:-7387491 MS.gene09594:CDS
TTGTTGCAGCCGCAAAGCCT+TGG 0.475384 5.2:-7387866 MS.gene09594:CDS
GTTAGAACAATTGCTGTTGA+GGG 0.477109 5.2:-7391188 MS.gene09594:CDS
ATGGATTCGTAGAGAGAGGG+AGG 0.479474 5.2:+7392735 None:intergenic
GTTCTACAACACACCGAAAG+TGG 0.479507 5.2:-7387807 MS.gene09594:CDS
AGGGTCATATATGCCAAAAC+AGG 0.480115 5.2:+7389836 None:intergenic
GTTCTTGCAGGATTTGATTG+AGG 0.481339 5.2:-7391992 MS.gene09594:CDS
GAAATCAACGATTCGCGCTC+CGG 0.482789 5.2:+7392375 None:intergenic
TTGGGTTGAGTGATCAGCTT+GGG 0.484657 5.2:-7392146 MS.gene09594:CDS
GATAGGCAGCCTTATGCAGC+AGG 0.485936 5.2:+7390164 None:intergenic
GGAGAAATTGATGCATGTAA+AGG 0.487328 5.2:-7387379 MS.gene09594:CDS
AGCATTAAGTGACCCAGTCT+TGG 0.488311 5.2:+7390981 None:intergenic
GTCTTGGACAGAGCACCTTA+AGG 0.488423 5.2:+7390997 None:intergenic
ATGATGTATGCAACGAGGTA+AGG 0.489515 5.2:-7391076 MS.gene09594:CDS
AACGATCTCGATAGAACAAA+AGG 0.490167 5.2:+7392342 None:intergenic
GTAAGGCTTTCTACGTTGAA+TGG 0.490296 5.2:-7391059 MS.gene09594:CDS
ATCTTTGTTATAATTGGTGA+CGG 0.493361 5.2:+7391128 None:intergenic
GGATTGAATTGTGGTGGTGA+TGG 0.498059 5.2:+7392716 None:intergenic
TGAGGCATCGGGATCTTCAA+GGG 0.498223 5.2:+7391286 None:intergenic
GCGGGAAGAGCGGCGGAGGG+TGG 0.498932 5.2:+7392638 None:intergenic
TCATCACAGAATTGAATTTG+AGG 0.499129 5.2:-7388081 MS.gene09594:CDS
TGCAGTAAGTAACTCTTTGA+GGG 0.500623 5.2:+7390426 None:intergenic
GCTGAATGCAGATCAGATAG+AGG 0.504242 5.2:-7390512 MS.gene09594:CDS
AGTTAGAACAATTGCTGTTG+AGG 0.504585 5.2:-7391189 MS.gene09594:CDS
AAGAGTATAATGGATGCAGT+TGG 0.504894 5.2:-7387600 MS.gene09594:CDS
GGTGATGGATTCGTAGAGAG+AGG 0.505660 5.2:+7392731 None:intergenic
AGTCATATTTCGGTCTCTGC+AGG 0.512308 5.2:-7391851 MS.gene09594:intron
GGGATATATTGTTTCGAGCA+TGG 0.517339 5.2:-7392056 MS.gene09594:CDS
TTAATCGTGATGACAGGGAT+TGG 0.517973 5.2:-7387485 MS.gene09594:CDS
CAAGGAGTGGAATTGAGAAT+GGG 0.519108 5.2:-7392014 MS.gene09594:CDS
TGCTTCAGCATGAGGATACC+AGG 0.519304 5.2:-7389967 MS.gene09594:CDS
CAACCGTCATTTGCAGAGCA+AGG 0.521212 5.2:+7389816 None:intergenic
CGATTCGAGAAGATTGAGGA+AGG 0.522090 5.2:+7392695 None:intergenic
AACATCGACTTCCGTCCATA+CGG 0.522970 5.2:+7392090 None:intergenic
TTAATCAGAGGACCGTAGAT+GGG 0.523203 5.2:-7391906 MS.gene09594:CDS
CAATTCTGTGATGATACAGC+TGG 0.524071 5.2:+7388090 None:intergenic
AAGTGGAAGGTTTACTAACT+GGG 0.525292 5.2:-7390399 MS.gene09594:CDS
AAGACTGGGTCACTTAATGC+TGG 0.526089 5.2:-7390979 MS.gene09594:CDS
AATGTGATACTGACTGATTC+CGG 0.528013 5.2:-7387993 MS.gene09594:CDS
TTCTTCTACATTACTTTCAG+AGG 0.530469 5.2:-7389732 MS.gene09594:intron
GTCATCACGATTAAACAACT+TGG 0.532544 5.2:+7387494 None:intergenic
AAGCTGTGCCAGAAGATTCA+AGG 0.532592 5.2:-7392032 MS.gene09594:CDS
GAAAAGAATGGTGATTCCAA+GGG 0.533003 5.2:-7389773 MS.gene09594:CDS
ACCTCAACAAGTGCTTTGTA+AGG 0.535761 5.2:-7388240 MS.gene09594:CDS
TGTTCGATTCGAGAAGATTG+AGG 0.537356 5.2:+7392691 None:intergenic
GAGTATAATGGATGCAGTTG+GGG 0.538063 5.2:-7387598 MS.gene09594:CDS
AAGTTGTTGCTTTCTTTGGG+AGG 0.538403 5.2:-7390217 MS.gene09594:CDS
CAAGTTATTGGCAAGAGTGA+AGG 0.539764 5.2:+7387944 None:intergenic
TGCAAGTATGCCATCTCGGA+AGG 0.539958 5.2:-7390601 MS.gene09594:CDS
GTATGGACGGAAGTCGATGT+TGG 0.540415 5.2:-7392088 MS.gene09594:CDS
CAAAAGTTCCAGAACTTGCA+TGG 0.542061 5.2:+7391962 None:intergenic
GATGATTATTTAGTAGCTGT+AGG 0.545384 5.2:-7390013 MS.gene09594:CDS
GAAGAAATGAGATTGGAAGA+GGG 0.546308 5.2:+7392762 None:intergenic
CTTAAGGACTTCATGAGAGT+GGG 0.547100 5.2:+7391013 None:intergenic
GAGCGGCGGAGGGTGGCGGT+GGG 0.547858 5.2:+7392645 None:intergenic
AATCGTGATGACAGGGATTG+GGG 0.550245 5.2:-7387483 MS.gene09594:CDS
AAATTTAATGTGACAACGAT+AGG 0.550315 5.2:+7390147 None:intergenic
ATGGTGGAAGGAGAATTTGC+CGG 0.551172 5.2:-7392394 MS.gene09594:CDS
TAGAGACTTGCTTCAGCATG+AGG 0.551742 5.2:-7389975 MS.gene09594:CDS
ATTCGTTCGCAGATTCCGTA+TGG 0.553384 5.2:-7392105 MS.gene09594:CDS
TTGAGACTATATGTGAAGAA+TGG 0.555953 5.2:-7392413 MS.gene09594:CDS
TTTGCGGGAAGAGCGGCGGA+GGG 0.556140 5.2:+7392635 None:intergenic
CCTCACAGTACAAGTTGCTA+TGG 0.556604 5.2:-7390949 MS.gene09594:CDS
TGAAAAGAATGGTGATTCCA+AGG 0.558871 5.2:-7389774 MS.gene09594:CDS
TTTAGACGCTCCTTCCGAGA+TGG 0.560520 5.2:+7390591 None:intergenic
CACTGTTTGTCCAGATAATG+TGG 0.561270 5.2:-7390332 MS.gene09594:CDS
AGATCCCGATGCCTCAAAAG+AGG 0.561369 5.2:-7391279 MS.gene09594:CDS
ATTGAGGAAGGATTGAATTG+TGG 0.561575 5.2:+7392707 None:intergenic
TAGTTTCTCAACCCCATCTA+CGG 0.562850 5.2:+7391894 None:intergenic
GTGATGGATTCGTAGAGAGA+GGG 0.563564 5.2:+7392732 None:intergenic
TAATTTCCCAAAATAGATGA+AGG 0.566722 5.2:+7391153 None:intergenic
AGACCGAAATATGACTGGCT+CGG 0.567968 5.2:+7391858 None:intergenic
TCCCTCAATAGTGCCCATTG+AGG 0.568869 5.2:-7390683 MS.gene09594:CDS
TGGGAGGGTTTATTAATCAG+AGG 0.569490 5.2:-7391918 MS.gene09594:CDS
GTCGATGTTGGAGGCTTATG+GGG 0.569573 5.2:-7392076 MS.gene09594:CDS
GGCTATCTCTGACAAATGCT+GGG 0.569692 5.2:-7388835 MS.gene09594:CDS
GTGCTCTCTGCAGTGAATGA+AGG 0.573610 5.2:-7387711 MS.gene09594:CDS
GTTAGCTTCTGAGCTACAGG+AGG 0.579964 5.2:+7390730 None:intergenic
GTTTGTCCAGATAATGTGGC+AGG 0.581670 5.2:-7390328 MS.gene09594:CDS
TGCAGAGACCGAAATATGAC+TGG 0.581828 5.2:+7391853 None:intergenic
AAAACTACATCAGGCAGCCA+AGG 0.582232 5.2:+7387849 None:intergenic
AATGCTGGGTACCCAAGTAA+TGG 0.583247 5.2:-7388821 MS.gene09594:CDS
AGAACAAAAGGACTTTGAGC+TGG 0.584523 5.2:-7387544 MS.gene09594:CDS
TTTAGTAGCTGTAACACTGT+GGG 0.585322 5.2:+7390108 None:intergenic
CTTACTGCAGAGAAAGTGGA+AGG 0.585811 5.2:-7390412 MS.gene09594:CDS
CTCAATAGTGCCCATTGAGG+AGG 0.589147 5.2:-7390680 MS.gene09594:CDS
CCTTAAGGACTTCATGAGAG+TGG 0.589374 5.2:+7391012 None:intergenic
TGGACGGAAGTCGATGTTGG+AGG 0.591488 5.2:-7392085 MS.gene09594:CDS
GTTGTTTAATCGTGATGACA+GGG 0.593151 5.2:-7387490 MS.gene09594:CDS
AGCTACAGGAGGTTGATCAC+TGG 0.593278 5.2:+7390741 None:intergenic
TTGAGGGCATCCATATAGCA+TGG 0.595418 5.2:+7390442 None:intergenic
AGACTATATGTGAAGAATGG+TGG 0.596012 5.2:-7392410 MS.gene09594:CDS
AAGAATAATCCATTGTTGTG+AGG 0.596859 5.2:+7388158 None:intergenic
TAGTAGCTGTAGGAGTTGCA+TGG 0.597500 5.2:-7390003 MS.gene09594:CDS
CTGAATGCAGATCAGATAGA+GGG 0.598250 5.2:-7390511 MS.gene09594:CDS
GAGGCATCGGGATCTTCAAG+GGG 0.599155 5.2:+7391287 None:intergenic
TGTCATTATGGAGGATCCAC+CGG 0.599171 5.2:+7387974 None:intergenic
ACCTTACAAAGCACTTGTTG+AGG 0.600071 5.2:+7388239 None:intergenic
TTTGGGTTGAGTGATCAGCT+TGG 0.601001 5.2:-7392147 MS.gene09594:CDS
GTTCGCAGATTCCGTATGGA+CGG 0.602215 5.2:-7392101 MS.gene09594:CDS
AAGGTGCTCTGTCCAAGACT+GGG 0.602746 5.2:-7390993 MS.gene09594:CDS
TATATGTGAAGAATGGTGGA+AGG 0.602831 5.2:-7392406 MS.gene09594:CDS
AACCGTCATTTGCAGAGCAA+GGG 0.604605 5.2:+7389817 None:intergenic
AAATCTATCATAAGATAGAG+AGG 0.605785 5.2:-7387434 MS.gene09594:CDS
TGGATTCGTAGAGAGAGGGA+GGG 0.607728 5.2:+7392736 None:intergenic
TCATCTATATGAAACTGGAA+AGG 0.612001 5.2:-7387331 MS.gene09594:CDS
GTGCCAGAAGATTCAAGGAG+TGG 0.612532 5.2:-7392027 MS.gene09594:CDS
GACCCTTGCTCTGCAAATGA+CGG 0.615907 5.2:-7389819 MS.gene09594:CDS
TCGTTGTCACATTAAATTTG+GGG 0.617087 5.2:-7390143 MS.gene09594:CDS
ATACTTGCAAAATATTGCAC+CGG 0.617576 5.2:+7390615 None:intergenic
GTTGAGTGATCAGCTTGGGA+AGG 0.621002 5.2:-7392142 MS.gene09594:CDS
TAATCAGAGGACCGTAGATG+GGG 0.621529 5.2:-7391905 MS.gene09594:CDS
TATAGATGATACGTCCAAAG+AGG 0.623631 5.2:+7387345 None:intergenic
AGGAGCAAAACACATGGCAG+TGG 0.623835 5.2:+7388178 None:intergenic
CACATTATCTGGACAAACAG+TGG 0.625302 5.2:+7390333 None:intergenic
CTTGTGACAAAACCAAACTC+AGG 0.631868 5.2:+7390539 None:intergenic
CAAATGACGGTTGATAATGT+TGG 0.639424 5.2:-7389806 MS.gene09594:CDS
GAGGAAGGATTGAATTGTGG+TGG 0.641780 5.2:+7392710 None:intergenic
GGATTGGGAACTGGGTTCGG+TGG 0.647078 5.2:+7392605 None:intergenic
TTAAGGACTTCATGAGAGTG+GGG 0.647165 5.2:+7391014 None:intergenic
TCTGCAGTGAATGAAGGTGA+AGG 0.654303 5.2:-7387705 MS.gene09594:CDS
TAGGGTTTATATGTTTCGCG+AGG 0.654308 5.2:-7392292 MS.gene09594:CDS
GCTGGGTACCCAAGTAATGG+AGG 0.655722 5.2:-7388818 MS.gene09594:intron
CTTCGAAGATGAGAGTATCG+AGG 0.656364 5.2:-7392253 MS.gene09594:CDS
AGTGTTGTCACAAACTGCCA+TGG 0.660349 5.2:-7390286 MS.gene09594:CDS
GAAGTCAGCATTGAGCATTG+TGG 0.665576 5.2:-7389884 MS.gene09594:CDS
CAACATCTTCAGGTAAACCA+TGG 0.669355 5.2:+7390269 None:intergenic
GGCACAAGTAGTGAAAAGAA+TGG 0.672314 5.2:-7389785 MS.gene09594:CDS
GTAGCTGTAACACTGTGGGA+TGG 0.675445 5.2:+7390112 None:intergenic
CACTGTACAATATCACAATG+TGG 0.676395 5.2:-7388951 MS.gene09594:CDS
ATAACTTGGAGTCAACAACT+GGG 0.682337 5.2:-7388922 MS.gene09594:CDS
AGGCATCGGGATCTTCAAGG+GGG 0.688549 5.2:+7391288 None:intergenic
AGTGGAAGGTTTACTAACTG+GGG 0.692191 5.2:-7390398 MS.gene09594:CDS
GCTAAAGAGATGAATTCTTG+TGG 0.699935 5.2:+7392846 None:intergenic
ACTATTGAGGGAAAGTACGA+AGG 0.710367 5.2:+7390694 None:intergenic
GTTGTGAGGAGCAAAACACA+TGG 0.711346 5.2:+7388172 None:intergenic
ATAGGCAGCCTTATGCAGCA+GGG 0.712099 5.2:+7390165 None:intergenic
AAAAGAATGGTGATTCCAAG+GGG 0.712247 5.2:-7389772 MS.gene09594:CDS
GTGATACTGACTGATTCCGG+TGG 0.713602 5.2:-7387990 MS.gene09594:CDS
CCATAGCAACTTGTACTGTG+AGG 0.720086 5.2:+7390949 None:intergenic
AGAAATTGATGCATGTAAAG+GGG 0.733317 5.2:-7387377 MS.gene09594:CDS
GTCTCATGATGTATGCAACG+AGG 0.768233 5.2:-7391081 MS.gene09594:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATACATATTGTAGTTATAA+TGG - chr5.2:7391420-7391439 MS.gene09594:intron 15.0%
!!! AATTTTGAATATCATTTAGA+TGG + chr5.2:7389277-7389296 None:intergenic 15.0%
!!! ATCACTTTTATGAAAATTTA+AGG + chr5.2:7388497-7388516 None:intergenic 15.0%
!!! GGTTTTCTTTTTATAAAAAA+AGG - chr5.2:7388674-7388693 MS.gene09594:intron 15.0%
!!! TAAAAAGAATAAGAGTATAA+TGG - chr5.2:7392577-7392596 MS.gene09594:CDS 15.0%
!! AAAATCAAAATTCCACAAAA+AGG - chr5.2:7391325-7391344 MS.gene09594:CDS 20.0%
!! AAATTATAATTTGACTGAGA+TGG + chr5.2:7391536-7391555 None:intergenic 20.0%
!! AATTAAATCAAGCAAGTTAT+TGG + chr5.2:7392258-7392277 None:intergenic 20.0%
!! ATAATGACTTGAAAATACAA+TGG + chr5.2:7391693-7391712 None:intergenic 20.0%
!! CGTAAATTGTAATAAGTAAT+GGG - chr5.2:7388744-7388763 MS.gene09594:intron 20.0%
!! GAAAAAAACAACATTTCTAA+AGG + chr5.2:7390267-7390286 None:intergenic 20.0%
!! TAAAATGAAACAAGCAATTT+AGG + chr5.2:7390640-7390659 None:intergenic 20.0%
!! TCGTAAATTGTAATAAGTAA+TGG - chr5.2:7388743-7388762 MS.gene09594:intron 20.0%
!! TTAAGATTATAATGCATACA+AGG + chr5.2:7388575-7388594 None:intergenic 20.0%
!! TTATATTTGAAAACAGAAGA+TGG - chr5.2:7387995-7388014 MS.gene09594:CDS 20.0%
!!! AAAGAAAATGCTTTTTGTTT+TGG - chr5.2:7388710-7388729 MS.gene09594:intron 20.0%
!!! GAGAATTTTATGTTTTTCAT+CGG + chr5.2:7387606-7387625 None:intergenic 20.0%
!!! TCAAAATTTTCAGTTTAACA+AGG - chr5.2:7389289-7389308 MS.gene09594:intron 20.0%
!!! TCTTCTGTTTTCAAATATAA+AGG + chr5.2:7387995-7388014 None:intergenic 20.0%
!!! TGTATTTTCAAGTCATTATT+AGG - chr5.2:7391694-7391713 MS.gene09594:intron 20.0%
!!! TTCAACTTCTTTTTTTCTTA+TGG - chr5.2:7390845-7390864 MS.gene09594:intron 20.0%
!!! TTGTCTAAATCTTTTTGTAT+AGG - chr5.2:7391909-7391928 MS.gene09594:CDS 20.0%
!!! TTTAATTGAAAATTTTCCAG+AGG + chr5.2:7390121-7390140 None:intergenic 20.0%
!!! TTTTGCTTTGTATATTAGAA+GGG - chr5.2:7388243-7388262 MS.gene09594:CDS 20.0%
!!! TTTTTTTAAACAGACTGTAT+TGG - chr5.2:7391158-7391177 MS.gene09594:CDS 20.0%
! AAAATCGAAGTTCCAAAAAA+AGG - chr5.2:7391289-7391308 MS.gene09594:CDS 25.0%
! AAATAGTTAGATGGGTAATT+GGG - chr5.2:7391579-7391598 MS.gene09594:intron 25.0%
! AAATCTATCATAAGATAGAG+AGG - chr5.2:7392753-7392772 MS.gene09594:CDS 25.0%
! AAATTTAATGTGACAACGAT+AGG + chr5.2:7390043-7390062 None:intergenic 25.0%
! ACATCAATTCATCAATACAA+TGG + chr5.2:7391134-7391153 None:intergenic 25.0%
! ACCTCTATAATTCGTAAAAA+TGG + chr5.2:7390726-7390745 None:intergenic 25.0%
! ATCGTTGTCACATTAAATTT+GGG - chr5.2:7390043-7390062 MS.gene09594:CDS 25.0%
! ATTAGCAAGTACATTAGATA+CGG + chr5.2:7389343-7389362 None:intergenic 25.0%
! CTAATATAATCAATTCTCAC+TGG - chr5.2:7389358-7389377 MS.gene09594:intron 25.0%
! GAAAAATCAAAAACCTTTCT+CGG + chr5.2:7387677-7387696 None:intergenic 25.0%
! GTCTGTATAAATAGTTAGAT+GGG - chr5.2:7391571-7391590 MS.gene09594:intron 25.0%
! TAAATAGTTAGATGGGTAAT+TGG - chr5.2:7391578-7391597 MS.gene09594:intron 25.0%
! TAATTTCCCAAAATAGATGA+AGG + chr5.2:7389037-7389056 None:intergenic 25.0%
! TATCGTTGTCACATTAAATT+TGG - chr5.2:7390042-7390061 MS.gene09594:CDS 25.0%
! TGAAGTTACAATTTCCAAAA+TGG - chr5.2:7392432-7392451 MS.gene09594:CDS 25.0%
! TGTCTGTATAAATAGTTAGA+TGG - chr5.2:7391570-7391589 MS.gene09594:intron 25.0%
!! ATATAAGTTTTCCTGGATTT+TGG - chr5.2:7390941-7390960 MS.gene09594:CDS 25.0%
!! ATCTTTGTTATAATTGGTGA+CGG + chr5.2:7389062-7389081 None:intergenic 25.0%
!! ATGACTAATATAAGTTTTCC+TGG - chr5.2:7390934-7390953 MS.gene09594:CDS 25.0%
!! ATTTGAAACTGTTGTTAAAC+AGG - chr5.2:7387957-7387976 MS.gene09594:CDS 25.0%
!! ATTTGATTTAACCATGTGTT+TGG - chr5.2:7391788-7391807 MS.gene09594:intron 25.0%
!! CTTTACCTTCTTTTCAATAT+AGG - chr5.2:7388824-7388843 MS.gene09594:CDS 25.0%
!! CTTTTGCTTTGTATATTAGA+AGG - chr5.2:7388242-7388261 MS.gene09594:CDS 25.0%
!! GCATGATAATTTGATTGTTT+TGG - chr5.2:7387724-7387743 MS.gene09594:CDS 25.0%
!! GTAAGCATCTTTGTTATAAT+TGG + chr5.2:7389068-7389087 None:intergenic 25.0%
!! TTGGTTAATTTTCAATTGTC+TGG - chr5.2:7390990-7391009 MS.gene09594:CDS 25.0%
!! TTGTATATTAGAAGGGTTTT+GGG - chr5.2:7388250-7388269 MS.gene09594:CDS 25.0%
!! TTTATGTTTTTCATCGGATT+GGG + chr5.2:7387600-7387619 None:intergenic 25.0%
!! TTTGTATATTAGAAGGGTTT+TGG - chr5.2:7388249-7388268 MS.gene09594:CDS 25.0%
!! TTTTATGTTTTTCATCGGAT+TGG + chr5.2:7387601-7387620 None:intergenic 25.0%
!! TTTTTACGAATTATAGAGGT+CGG - chr5.2:7390726-7390745 MS.gene09594:CDS 25.0%
!!! ACCATTTTTACGAATTATAG+AGG - chr5.2:7390722-7390741 MS.gene09594:CDS 25.0%
!!! CGTTTTGTACATAGTTTTAT+TGG - chr5.2:7390488-7390507 MS.gene09594:CDS 25.0%
!!! TAATTTGATTGTTTTGGAAG+CGG - chr5.2:7387730-7387749 MS.gene09594:CDS 25.0%
!!! TCTAGTTCTATTTTGAATTC+TGG - chr5.2:7391632-7391651 MS.gene09594:intron 25.0%
!!! TTTTTTCCCTTGAAATTTTC+AGG - chr5.2:7391029-7391048 MS.gene09594:CDS 25.0%
AAACACAGTAAAATGTATGC+TGG + chr5.2:7388390-7388409 None:intergenic 30.0%
AAATGAAAACAGATAGATGC+CGG + chr5.2:7391772-7391791 None:intergenic 30.0%
AACACAGTAAAATGTATGCT+GGG + chr5.2:7388389-7388408 None:intergenic 30.0%
AACTGCTTGGAAAAACTATT+TGG - chr5.2:7391204-7391223 MS.gene09594:CDS 30.0%
AAGAATAATCCATTGTTGTG+AGG + chr5.2:7392032-7392051 None:intergenic 30.0%
AAGTTGAGCTCTCTTAAATT+TGG - chr5.2:7388652-7388671 MS.gene09594:intron 30.0%
AATTGACGTGAAATTATAGC+AGG + chr5.2:7390912-7390931 None:intergenic 30.0%
ACGTATCATCTATATGAAAC+TGG - chr5.2:7392851-7392870 MS.gene09594:CDS 30.0%
AGAAAATGTTTGTGCAACAT+TGG - chr5.2:7388465-7388484 MS.gene09594:intron 30.0%
AGAAATTGATGCATGTAAAG+GGG - chr5.2:7392810-7392829 MS.gene09594:CDS 30.0%
AGGAAAAAATCTAAATCCTC+TGG - chr5.2:7390102-7390121 MS.gene09594:CDS 30.0%
AGGGTTTGATTGAATGAATT+AGG + chr5.2:7387409-7387428 None:intergenic 30.0%
AGTTGAGCTCTCTTAAATTT+GGG - chr5.2:7388653-7388672 MS.gene09594:intron 30.0%
ATACTTGCAAAATATTGCAC+CGG + chr5.2:7389575-7389594 None:intergenic 30.0%
CAATATCATAACAATCATGC+CGG + chr5.2:7391058-7391077 None:intergenic 30.0%
CAATTCATCAATACAATGGA+AGG + chr5.2:7391130-7391149 None:intergenic 30.0%
CCAAAAAAAGGAAGAAAACA+GGG - chr5.2:7391301-7391320 MS.gene09594:CDS 30.0%
CTAATCCACACTATAAAATC+CGG - chr5.2:7391750-7391769 MS.gene09594:intron 30.0%
CTCGACATTCAATAAACTTA+CGG - chr5.2:7392535-7392554 MS.gene09594:CDS 30.0%
GAATGCAAAACAAAATCACA+AGG + chr5.2:7390782-7390801 None:intergenic 30.0%
GAGAAATTGATGCATGTAAA+GGG - chr5.2:7392809-7392828 MS.gene09594:CDS 30.0%
GATGATTATTTAGTAGCTGT+AGG - chr5.2:7390174-7390193 MS.gene09594:CDS 30.0%
GGGTTTGATTGAATGAATTA+GGG + chr5.2:7387408-7387427 None:intergenic 30.0%
GTTGACATTGAAGAAAAAAG+TGG - chr5.2:7387865-7387884 MS.gene09594:CDS 30.0%
GTTTCAACTGAATCATGTTT+GGG - chr5.2:7392278-7392297 MS.gene09594:CDS 30.0%
GTTTCATTTGTGAAGGAATA+TGG - chr5.2:7391718-7391737 MS.gene09594:intron 30.0%
TAAAACTCATCTTATGGAAC+TGG - chr5.2:7389615-7389634 MS.gene09594:intron 30.0%
TAAATGTTCACTTCCACTTT+CGG + chr5.2:7392396-7392415 None:intergenic 30.0%
TAAGTGATGCATTGAGTAAA+AGG + chr5.2:7390817-7390836 None:intergenic 30.0%
TCATCACAGAATTGAATTTG+AGG - chr5.2:7392106-7392125 MS.gene09594:CDS 30.0%
TCATCTATATGAAACTGGAA+AGG - chr5.2:7392856-7392875 MS.gene09594:CDS 30.0%
TCCAAAAAAAGGAAGAAAAC+AGG - chr5.2:7391300-7391319 MS.gene09594:CDS 30.0%
TCGTTGTCACATTAAATTTG+GGG - chr5.2:7390044-7390063 MS.gene09594:CDS 30.0%
TGTTTCAACTGAATCATGTT+TGG - chr5.2:7392277-7392296 MS.gene09594:CDS 30.0%
TTAGCAAGTACATTAGATAC+GGG + chr5.2:7389342-7389361 None:intergenic 30.0%
TTCTTCTACATTACTTTCAG+AGG - chr5.2:7390455-7390474 MS.gene09594:CDS 30.0%
TTGAATGTCGAGAATTTATC+TGG + chr5.2:7392527-7392546 None:intergenic 30.0%
TTGAGACTATATGTGAAGAA+TGG - chr5.2:7387774-7387793 MS.gene09594:CDS 30.0%
! AGAGGATTTAGAGGATTTTA+GGG + chr5.2:7387378-7387397 None:intergenic 30.0%
! CATCTTTTGTTCAGTTTCAT+TGG - chr5.2:7390971-7390990 MS.gene09594:CDS 30.0%
! GATATGTTGTATGCATTTTG+AGG + chr5.2:7392063-7392082 None:intergenic 30.0%
! TTGATCGCCAATCTAAAATT+AGG - chr5.2:7389938-7389957 MS.gene09594:CDS 30.0%
! TTTAAAATTCATCTACCCTC+TGG - chr5.2:7390522-7390541 MS.gene09594:CDS 30.0%
!! ACATAAGTTGTTGCTTTCTT+TGG - chr5.2:7389966-7389985 MS.gene09594:CDS 30.0%
!! CATAAGTTGTTGCTTTCTTT+GGG - chr5.2:7389967-7389986 MS.gene09594:CDS 30.0%
!! TTGCTTGTTTCATTTTAACG+TGG - chr5.2:7390643-7390662 MS.gene09594:CDS 30.0%
!!! AAGTTTCTGGCTTTTTTGTT+TGG - chr5.2:7388022-7388041 MS.gene09594:CDS 30.0%
!!! AGTTTCTGGCTTTTTTGTTT+GGG - chr5.2:7388023-7388042 MS.gene09594:CDS 30.0%
!!! GTTGTTTTTTTCGCTTAAGA+TGG - chr5.2:7390275-7390294 MS.gene09594:CDS 30.0%
!!! TTTAGAGGATTTTAGGGTTA+AGG + chr5.2:7387372-7387391 None:intergenic 30.0%
AAAAGAATGGTGATTCCAAG+GGG - chr5.2:7390415-7390434 MS.gene09594:CDS 35.0%
AAAATTCCACAAAAAGGCGA+AGG - chr5.2:7391331-7391350 MS.gene09594:CDS 35.0%
AAACTAGCACAGTGCAAATT+GGG + chr5.2:7390688-7390707 None:intergenic 35.0%
AAAGTGGAAGGTTTACTAAC+TGG - chr5.2:7389787-7389806 MS.gene09594:CDS 35.0%
AACAAAAAGAGCCAAACACA+TGG + chr5.2:7391802-7391821 None:intergenic 35.0%
AACGATCTCGATAGAACAAA+AGG + chr5.2:7387848-7387867 None:intergenic 35.0%
AAGCTTACAACATAGCATCA+CGG + chr5.2:7388526-7388545 None:intergenic 35.0%
AAGTGGAAGGTTTACTAACT+GGG - chr5.2:7389788-7389807 MS.gene09594:CDS 35.0%
ACAGCAATTGTTCTAACTTC+TGG + chr5.2:7388996-7389015 None:intergenic 35.0%
ACAGTGTTACAGCTACTAAA+AGG - chr5.2:7390082-7390101 MS.gene09594:CDS 35.0%
ACTAGTAAAAAGGTCTCCAA+TGG - chr5.2:7389549-7389568 MS.gene09594:intron 35.0%
AGAAAAAAGTGGATGTGCAT+AGG - chr5.2:7387876-7387895 MS.gene09594:CDS 35.0%
AGAAGATGGAAGAAAGTTTC+TGG - chr5.2:7388009-7388028 MS.gene09594:CDS 35.0%
AGACTATATGTGAAGAATGG+TGG - chr5.2:7387777-7387796 MS.gene09594:CDS 35.0%
AGATCTAAAGATTGCTTTCC+TGG + chr5.2:7390241-7390260 None:intergenic 35.0%
AGCTAGTAATAACGATGAAC+TGG - chr5.2:7392787-7392806 MS.gene09594:CDS 35.0%
AGCTCAACTTGATTATAAGC+TGG + chr5.2:7388642-7388661 None:intergenic 35.0%
AGTTGTTTAATCGTGATGAC+AGG - chr5.2:7392696-7392715 MS.gene09594:CDS 35.0%
ATAACTTGGAGTCAACAACT+GGG - chr5.2:7391265-7391284 MS.gene09594:CDS 35.0%
ATGTTTGTGCAACATTGGAT+TGG - chr5.2:7388470-7388489 MS.gene09594:intron 35.0%
ATTAGGCGTTTCATTTGTGA+AGG - chr5.2:7391711-7391730 MS.gene09594:intron 35.0%
ATTGAGGAAGGATTGAATTG+TGG + chr5.2:7387483-7387502 None:intergenic 35.0%
CAATGTGGATTCACATAACT+TGG - chr5.2:7391251-7391270 MS.gene09594:CDS 35.0%
CACTGTACAATATCACAATG+TGG - chr5.2:7391236-7391255 MS.gene09594:CDS 35.0%
CAGAATTGAATTTGAGGAAG+AGG - chr5.2:7392112-7392131 MS.gene09594:CDS 35.0%
CGGAAACCTGAAAATTTCAA+GGG + chr5.2:7391038-7391057 None:intergenic 35.0%
CTGTAATCTTATGACTTTCG+AGG - chr5.2:7388603-7388622 MS.gene09594:intron 35.0%
GAAAAAAGTGGATGTGCATA+GGG - chr5.2:7387877-7387896 MS.gene09594:CDS 35.0%
GAAAAGAATGGTGATTCCAA+GGG - chr5.2:7390414-7390433 MS.gene09594:CDS 35.0%
GAAGAAATGAGATTGGAAGA+GGG + chr5.2:7387428-7387447 None:intergenic 35.0%
GCTAAAGAGATGAATTCTTG+TGG + chr5.2:7387344-7387363 None:intergenic 35.0%
GCTGCATTACACTAGTAAAA+AGG - chr5.2:7389539-7389558 MS.gene09594:intron 35.0%
GGAGAAATTGATGCATGTAA+AGG - chr5.2:7392808-7392827 MS.gene09594:CDS 35.0%
GTACATTAGATACGGGAATT+AGG + chr5.2:7389335-7389354 None:intergenic 35.0%
GTCATCACGATTAAACAACT+TGG + chr5.2:7392696-7392715 None:intergenic 35.0%
GTTAAATGAATGAGTGAGCT+AGG + chr5.2:7391101-7391120 None:intergenic 35.0%
GTTGTTTAATCGTGATGACA+GGG - chr5.2:7392697-7392716 MS.gene09594:CDS 35.0%
TAAACTAGCACAGTGCAAAT+TGG + chr5.2:7390689-7390708 None:intergenic 35.0%
TATAGATGATACGTCCAAAG+AGG + chr5.2:7392845-7392864 None:intergenic 35.0%
TGAAAAGAATGGTGATTCCA+AGG - chr5.2:7390413-7390432 MS.gene09594:CDS 35.0%
TGAAGAAATGAGATTGGAAG+AGG + chr5.2:7387429-7387448 None:intergenic 35.0%
TGACATGATGTTATCTTCTC+TGG - chr5.2:7392727-7392746 MS.gene09594:CDS 35.0%
TGCAATGAATACCAGCAATT+TGG + chr5.2:7390583-7390602 None:intergenic 35.0%
TGCAGCCTATATTGAAAAGA+AGG + chr5.2:7388832-7388851 None:intergenic 35.0%
TGCAGTAAGTAACTCTTTGA+GGG + chr5.2:7389764-7389783 None:intergenic 35.0%
TGTAATGCAAAGACTTCAGA+TGG + chr5.2:7388435-7388454 None:intergenic 35.0%
TTCTTGCAGGATTTGATTGA+GGG - chr5.2:7388196-7388215 MS.gene09594:CDS 35.0%
TTTAGTAGCTGTAACACTGT+GGG + chr5.2:7390082-7390101 None:intergenic 35.0%
! AATGTGATACTGACTGATTC+CGG - chr5.2:7392194-7392213 MS.gene09594:CDS 35.0%
! AGCGTCTAAAACTCATCTTA+TGG - chr5.2:7389609-7389628 MS.gene09594:intron 35.0%
! AGTTAGAACAATTGCTGTTG+AGG - chr5.2:7388998-7389017 MS.gene09594:CDS 35.0%
! ATTTTCTCACCTCCATTACT+TGG + chr5.2:7391381-7391400 None:intergenic 35.0%
! ATTTTGCAAGTATGCCATCT+CGG - chr5.2:7389582-7389601 MS.gene09594:intron 35.0%
! CATAGACATATCTCCTGTTT+TGG - chr5.2:7390338-7390357 MS.gene09594:CDS 35.0%
! CCCTGTTTTCTTCCTTTTTT+TGG + chr5.2:7391304-7391323 None:intergenic 35.0%
! GAAGGCTTTTGATGTCATTA+TGG + chr5.2:7392228-7392247 None:intergenic 35.0%
! GAGAGGATTTAGAGGATTTT+AGG + chr5.2:7387379-7387398 None:intergenic 35.0%
! GTGCAGACCTAATTTTAGAT+TGG + chr5.2:7389948-7389967 None:intergenic 35.0%
! GTTAGAACAATTGCTGTTGA+GGG - chr5.2:7388999-7389018 MS.gene09594:CDS 35.0%
! TATATGTGAAGAATGGTGGA+AGG - chr5.2:7387781-7387800 MS.gene09594:CDS 35.0%
! TCGTGTCCTTCATCTATTTT+GGG - chr5.2:7389028-7389047 MS.gene09594:intron 35.0%
! TGTATCCTTATCCTCTTTTG+AGG + chr5.2:7388922-7388941 None:intergenic 35.0%
! TTTTAGTAGCTGTAACACTG+TGG + chr5.2:7390083-7390102 None:intergenic 35.0%
! TTTTCTCACCTCCATTACTT+GGG + chr5.2:7391380-7391399 None:intergenic 35.0%
!! AAGAGTATAATGGATGCAGT+TGG - chr5.2:7392587-7392606 MS.gene09594:CDS 35.0%
!! AATCTTAGTTTTCTTCCCCT+TGG + chr5.2:7390433-7390452 None:intergenic 35.0%
!! AGAGTATAATGGATGCAGTT+GGG - chr5.2:7392588-7392607 MS.gene09594:CDS 35.0%
!! ATAGTGTGGATTAGCCAAAA+GGG + chr5.2:7391744-7391763 None:intergenic 35.0%
!! CAAATGACGGTTGATAATGT+TGG - chr5.2:7390381-7390400 MS.gene09594:CDS 35.0%
!! TATAGTGTGGATTAGCCAAA+AGG + chr5.2:7391745-7391764 None:intergenic 35.0%
!! TCTTGGTTTGTTCACTTGTT+GGG - chr5.2:7392618-7392637 MS.gene09594:CDS 35.0%
!! TTCTTGGTTTGTTCACTTGT+TGG - chr5.2:7392617-7392636 MS.gene09594:CDS 35.0%
!!! ACAGTTTTGGCTACAATCAA+GGG + chr5.2:7392458-7392477 None:intergenic 35.0%
!!! ATATTAGAAGGGTTTTGGGA+GGG - chr5.2:7388254-7388273 MS.gene09594:CDS 35.0%
!!! ATGAATTAGGGTTTTGAGAG+AGG + chr5.2:7387396-7387415 None:intergenic 35.0%
!!! CCTTGAAATTTTCAGGTTTC+CGG - chr5.2:7391036-7391055 MS.gene09594:CDS 35.0%
!!! GATTTTTCTGATTTGCTACC+TGG - chr5.2:7387689-7387708 MS.gene09594:CDS 35.0%
!!! TATATTAGAAGGGTTTTGGG+AGG - chr5.2:7388253-7388272 MS.gene09594:CDS 35.0%
ACCTCAACAAGTGCTTTGTA+AGG - chr5.2:7391947-7391966 MS.gene09594:CDS 40.0%
AGAACAAAAGGACTTTGAGC+TGG - chr5.2:7392643-7392662 MS.gene09594:CDS 40.0%
AGAAGAAAATGCACAACCAG+AGG + chr5.2:7390541-7390560 None:intergenic 40.0%
AGAAGAAACCTGTAGAGAAG+TGG + chr5.2:7391658-7391677 None:intergenic 40.0%
AGGGAGTGAAGAAATGAGAT+TGG + chr5.2:7387435-7387454 None:intergenic 40.0%
AGGGTCATATATGCCAAAAC+AGG + chr5.2:7390354-7390373 None:intergenic 40.0%
AGTCAGTGAACCATGCTATA+TGG - chr5.2:7389735-7389754 MS.gene09594:CDS 40.0%
AGTGGAAGGTTTACTAACTG+GGG - chr5.2:7389789-7389808 MS.gene09594:CDS 40.0%
ATGATGTATGCAACGAGGTA+AGG - chr5.2:7389111-7389130 MS.gene09594:intron 40.0%
ATTAATCAGAGGACCGTAGA+TGG - chr5.2:7388280-7388299 MS.gene09594:intron 40.0%
ATTCCACTCCTTGAATCTTC+TGG + chr5.2:7388166-7388185 None:intergenic 40.0%
CAAAAGTTCCAGAACTTGCA+TGG + chr5.2:7388228-7388247 None:intergenic 40.0%
CAACATCTTCAGGTAAACCA+TGG + chr5.2:7389921-7389940 None:intergenic 40.0%
CAAGGAGTGGAATTGAGAAT+GGG - chr5.2:7388173-7388192 MS.gene09594:CDS 40.0%
CAAGTTATTGGCAAGAGTGA+AGG + chr5.2:7392246-7392265 None:intergenic 40.0%
CAATAAACTTACGGCTATGC+TGG - chr5.2:7392544-7392563 MS.gene09594:CDS 40.0%
CAATTCTGTGATGATACAGC+TGG + chr5.2:7392100-7392119 None:intergenic 40.0%
CACATTATCTGGACAAACAG+TGG + chr5.2:7389857-7389876 None:intergenic 40.0%
CACTGTTTGTCCAGATAATG+TGG - chr5.2:7389855-7389874 MS.gene09594:CDS 40.0%
CAGTGCAAATTGGGAATGAA+AGG + chr5.2:7390679-7390698 None:intergenic 40.0%
CATAACTTGGAGTCAACAAC+TGG - chr5.2:7391264-7391283 MS.gene09594:CDS 40.0%
CCGGAAACCTGAAAATTTCA+AGG + chr5.2:7391039-7391058 None:intergenic 40.0%
CTGAAGTCTTTGCATTACAC+TGG - chr5.2:7388436-7388455 MS.gene09594:intron 40.0%
CTGAATGCAGATCAGATAGA+GGG - chr5.2:7389676-7389695 MS.gene09594:intron 40.0%
CTGCAGTAAGTAACTCTTTG+AGG + chr5.2:7389765-7389784 None:intergenic 40.0%
CTTAAGGACTTCATGAGAGT+GGG + chr5.2:7389177-7389196 None:intergenic 40.0%
CTTGTGACAAAACCAAACTC+AGG + chr5.2:7389651-7389670 None:intergenic 40.0%
GAAATTATAGCAGGCCAGAA+TGG + chr5.2:7390903-7390922 None:intergenic 40.0%
GAAGAAAATGCACAACCAGA+GGG + chr5.2:7390540-7390559 None:intergenic 40.0%
GGCACAAGTAGTGAAAAGAA+TGG - chr5.2:7390402-7390421 MS.gene09594:CDS 40.0%
GGGATATATTGTTTCGAGCA+TGG - chr5.2:7388131-7388150 MS.gene09594:CDS 40.0%
GTAAGGCTTTCTACGTTGAA+TGG - chr5.2:7389128-7389147 MS.gene09594:intron 40.0%
GTGAATGAAGGTGAAGGATA+TGG - chr5.2:7392488-7392507 MS.gene09594:CDS 40.0%
GTTACTTACTGCAGAGAAAG+TGG - chr5.2:7389771-7389790 MS.gene09594:CDS 40.0%
GTTCTTGCAGGATTTGATTG+AGG - chr5.2:7388195-7388214 MS.gene09594:CDS 40.0%
TAATCGTGATGACAGGGATT+GGG - chr5.2:7392703-7392722 MS.gene09594:CDS 40.0%
TAGGGTTTATATGTTTCGCG+AGG - chr5.2:7387895-7387914 MS.gene09594:CDS 40.0%
TAGTTTCTCAACCCCATCTA+CGG + chr5.2:7388296-7388315 None:intergenic 40.0%
TATAAGCTGGTATACCAACC+AGG + chr5.2:7388629-7388648 None:intergenic 40.0%
TCAAGGAGTGGAATTGAGAA+TGG - chr5.2:7388172-7388191 MS.gene09594:CDS 40.0%
TGAACTATGTGTATCGTCTC+TGG - chr5.2:7391860-7391879 MS.gene09594:CDS 40.0%
TGGGAGGGTTTATTAATCAG+AGG - chr5.2:7388269-7388288 MS.gene09594:intron 40.0%
TTAAGGACTTCATGAGAGTG+GGG + chr5.2:7389176-7389195 None:intergenic 40.0%
TTAATCAGAGGACCGTAGAT+GGG - chr5.2:7388281-7388300 MS.gene09594:intron 40.0%
TTAATCGTGATGACAGGGAT+TGG - chr5.2:7392702-7392721 MS.gene09594:CDS 40.0%
! AAGTCAGCATTGAGCATTGT+GGG - chr5.2:7390304-7390323 MS.gene09594:CDS 40.0%
! AATTGAGAATGGGTTCTTGC+AGG - chr5.2:7388183-7388202 MS.gene09594:CDS 40.0%
! ACCTTACAAAGCACTTGTTG+AGG + chr5.2:7391951-7391970 None:intergenic 40.0%
! ACTATTGAGGGAAAGTACGA+AGG + chr5.2:7389496-7389515 None:intergenic 40.0%
! ACTTGTTGGGCTAGAACAAA+AGG - chr5.2:7392631-7392650 MS.gene09594:CDS 40.0%
! AGATGCCGGATTTTATAGTG+TGG + chr5.2:7391758-7391777 None:intergenic 40.0%
! ATCAATTCTCACTGGTTAGC+TGG - chr5.2:7389366-7389385 MS.gene09594:intron 40.0%
! CATAGCTGAAAGAGCTTTTC+AGG + chr5.2:7392160-7392179 None:intergenic 40.0%
! GAATGCTTTGCATCTGCTTT+TGG - chr5.2:7388869-7388888 MS.gene09594:CDS 40.0%
! GGCTTTTGATGTCATTATGG+AGG + chr5.2:7392225-7392244 None:intergenic 40.0%
! GTCGTGTCCTTCATCTATTT+TGG - chr5.2:7389027-7389046 MS.gene09594:intron 40.0%
! TGCAGTTGGGGATATTTTCT+TGG - chr5.2:7392601-7392620 MS.gene09594:CDS 40.0%
! TGTTCGATTCGAGAAGATTG+AGG + chr5.2:7387499-7387518 None:intergenic 40.0%
! TGTTTTGCTCCTCACAACAA+TGG - chr5.2:7392020-7392039 MS.gene09594:CDS 40.0%
! TTTGTTAGCTTCTGAGCTAC+AGG + chr5.2:7389463-7389482 None:intergenic 40.0%
!! AAGTTGTTGCTTTCTTTGGG+AGG - chr5.2:7389970-7389989 MS.gene09594:CDS 40.0%
!! AGCGGATTCGATTTTGTCTT+CGG - chr5.2:7387748-7387767 MS.gene09594:CDS 40.0%
!! GAGTATAATGGATGCAGTTG+GGG - chr5.2:7392589-7392608 MS.gene09594:CDS 40.0%
!! TACTGCTGTTCTGAAGTTCA+TGG - chr5.2:7391980-7391999 MS.gene09594:CDS 40.0%
!! TTTTCATCGGATTGGGAACT+GGG + chr5.2:7387593-7387612 None:intergenic 40.0%
!! TTTTTCATCGGATTGGGAAC+TGG + chr5.2:7387594-7387613 None:intergenic 40.0%
!!! CACAGTTTTGGCTACAATCA+AGG + chr5.2:7392459-7392478 None:intergenic 40.0%
!!! CTTATCCTCTTTTGAGGCAT+CGG + chr5.2:7388916-7388935 None:intergenic 40.0%
!!! GGATTTTAGGGTTAAGGTTG+TGG + chr5.2:7387366-7387385 None:intergenic 40.0%
!!! GGTTTTGAGAGAGGATTTAG+AGG + chr5.2:7387387-7387406 None:intergenic 40.0%
!!! TTATCCTCTTTTGAGGCATC+GGG + chr5.2:7388915-7388934 None:intergenic 40.0%
AAAACTACATCAGGCAGCCA+AGG + chr5.2:7392341-7392360 None:intergenic 45.0%
AACCGTCATTTGCAGAGCAA+GGG + chr5.2:7390373-7390392 None:intergenic 45.0%
AAGACTGGGTCACTTAATGC+TGG - chr5.2:7389208-7389227 MS.gene09594:intron 45.0%
AAGCTGTGCCAGAAGATTCA+AGG - chr5.2:7388155-7388174 MS.gene09594:CDS 45.0%
AAGGACTTTGAGCTGGCATT+AGG - chr5.2:7392650-7392669 MS.gene09594:CDS 45.0%
AAGTCGATGTTGGAGGCTTA+TGG - chr5.2:7388109-7388128 MS.gene09594:CDS 45.0%
AATCGTGATGACAGGGATTG+GGG - chr5.2:7392704-7392723 MS.gene09594:CDS 45.0%
AATGCTGGGTACCCAAGTAA+TGG - chr5.2:7391366-7391385 MS.gene09594:intron 45.0%
AATTCTGGCCACTTCTCTAC+AGG - chr5.2:7391647-7391666 MS.gene09594:intron 45.0%
AGAAGTCCTGCCACATTATC+TGG + chr5.2:7389868-7389887 None:intergenic 45.0%
AGCATTAAGTGACCCAGTCT+TGG + chr5.2:7389209-7389228 None:intergenic 45.0%
AGGCTATCTCTGACAAATGC+TGG - chr5.2:7391351-7391370 MS.gene09594:intron 45.0%
AGTCATATTTCGGTCTCTGC+AGG - chr5.2:7388336-7388355 MS.gene09594:intron 45.0%
AGTCGATGTTGGAGGCTTAT+GGG - chr5.2:7388110-7388129 MS.gene09594:CDS 45.0%
AGTGTTGTCACAAACTGCCA+TGG - chr5.2:7389901-7389920 MS.gene09594:CDS 45.0%
ATCTTATGACTTTCGAGGCC+TGG - chr5.2:7388608-7388627 MS.gene09594:intron 45.0%
ATTCGTTCGCAGATTCCGTA+TGG - chr5.2:7388082-7388101 MS.gene09594:CDS 45.0%
CCACTCTCATGAAGTCCTTA+AGG - chr5.2:7389175-7389194 MS.gene09594:intron 45.0%
CCATAGCAACTTGTACTGTG+AGG + chr5.2:7389241-7389260 None:intergenic 45.0%
CCTCACAGTACAAGTTGCTA+TGG - chr5.2:7389238-7389257 MS.gene09594:intron 45.0%
CCTTAAGGACTTCATGAGAG+TGG + chr5.2:7389178-7389197 None:intergenic 45.0%
CGATGCCTCAAAAGAGGATA+AGG - chr5.2:7388914-7388933 MS.gene09594:CDS 45.0%
CGATTACATGCCTCCTCAAT+GGG + chr5.2:7389520-7389539 None:intergenic 45.0%
CGATTCGAGAAGATTGAGGA+AGG + chr5.2:7387495-7387514 None:intergenic 45.0%
CGTTGTTGTGTGATTCCTGT+AGG - chr5.2:7389390-7389409 MS.gene09594:intron 45.0%
CTTAACAACCCTGCTGCATA+AGG - chr5.2:7390014-7390033 MS.gene09594:CDS 45.0%
CTTACTGCAGAGAAAGTGGA+AGG - chr5.2:7389775-7389794 MS.gene09594:CDS 45.0%
CTTATGCAGCAGGGTTGTTA+AGG + chr5.2:7390016-7390035 None:intergenic 45.0%
GAGGAAGGATTGAATTGTGG+TGG + chr5.2:7387480-7387499 None:intergenic 45.0%
GATGCAGACAACCAAAATCC+AGG + chr5.2:7390955-7390974 None:intergenic 45.0%
GATTGGCGATCAACATCTTC+AGG + chr5.2:7389931-7389950 None:intergenic 45.0%
GCATGTCAAAGCCAAATTGC+TGG - chr5.2:7390569-7390588 MS.gene09594:CDS 45.0%
GCTGAATGCAGATCAGATAG+AGG - chr5.2:7389675-7389694 MS.gene09594:intron 45.0%
GGCTATCTCTGACAAATGCT+GGG - chr5.2:7391352-7391371 MS.gene09594:intron 45.0%
GGTTCTATCCATGCAAGTTC+TGG - chr5.2:7388217-7388236 MS.gene09594:CDS 45.0%
GTAAAAAGGTCTCCAATGGC+CGG - chr5.2:7389553-7389572 MS.gene09594:intron 45.0%
GTCTCATGATGTATGCAACG+AGG - chr5.2:7389106-7389125 MS.gene09594:intron 45.0%
GTTCTACAACACACCGAAAG+TGG - chr5.2:7392380-7392399 MS.gene09594:CDS 45.0%
GTTGTGAGGAGCAAAACACA+TGG + chr5.2:7392018-7392037 None:intergenic 45.0%
GTTTGTCCAGATAATGTGGC+AGG - chr5.2:7389859-7389878 MS.gene09594:CDS 45.0%
TAATCAGAGGACCGTAGATG+GGG - chr5.2:7388282-7388301 MS.gene09594:intron 45.0%
TAGTAGCTGTAGGAGTTGCA+TGG - chr5.2:7390184-7390203 MS.gene09594:CDS 45.0%
TCATGCAATGCTTGAACTCC+AGG + chr5.2:7387710-7387729 None:intergenic 45.0%
TCCTCAATGGGCACTATTGA+GGG + chr5.2:7389508-7389527 None:intergenic 45.0%
TCTGCAGTGAATGAAGGTGA+AGG - chr5.2:7392482-7392501 MS.gene09594:CDS 45.0%
TGCAGAGACCGAAATATGAC+TGG + chr5.2:7388337-7388356 None:intergenic 45.0%
TGTCATTATGGAGGATCCAC+CGG + chr5.2:7392216-7392235 None:intergenic 45.0%
TGTTGTGTGATTCCTGTAGG+TGG - chr5.2:7389393-7389412 MS.gene09594:intron 45.0%
TTGAGCACACTGTGCGAAAT+AGG - chr5.2:7391473-7391492 MS.gene09594:intron 45.0%
TTGCCGAGCCAGTCATATTT+CGG - chr5.2:7388326-7388345 MS.gene09594:intron 45.0%
! AGACCGAAATATGACTGGCT+CGG + chr5.2:7388332-7388351 None:intergenic 45.0%
! AGATAGCCTTCGCCTTTTTG+TGG + chr5.2:7391340-7391359 None:intergenic 45.0%
! ATGGTGGAAGGAGAATTTGC+CGG - chr5.2:7387793-7387812 MS.gene09594:CDS 45.0%
! CAAAATATTGCACCGGCCAT+TGG + chr5.2:7389568-7389587 None:intergenic 45.0%
! CGGATTCGATTTTGTCTTCG+GGG - chr5.2:7387750-7387769 MS.gene09594:CDS 45.0%
! GAAGTCAGCATTGAGCATTG+TGG - chr5.2:7390303-7390322 MS.gene09594:CDS 45.0%
! GCGGATTCGATTTTGTCTTC+GGG - chr5.2:7387749-7387768 MS.gene09594:CDS 45.0%
! GCTACAATCAAGGGCCATTT+TGG + chr5.2:7392449-7392468 None:intergenic 45.0%
! GGATTGAATTGTGGTGGTGA+TGG + chr5.2:7387474-7387493 None:intergenic 45.0%
! GGTCAAAGCATTCCTGAGTT+TGG - chr5.2:7389636-7389655 MS.gene09594:intron 45.0%
! GTGAAGGAATATGGCCCTTT+TGG - chr5.2:7391727-7391746 MS.gene09594:intron 45.0%
! GTGCTCAAGTTGCATGCATT+TGG + chr5.2:7391461-7391480 None:intergenic 45.0%
! TAGAGACTTGCTTCAGCATG+AGG - chr5.2:7390212-7390231 MS.gene09594:CDS 45.0%
! TTGGCTGCCTGATGTAGTTT+TGG - chr5.2:7392340-7392359 MS.gene09594:CDS 45.0%
!! AACATCGACTTCCGTCCATA+CGG + chr5.2:7388100-7388119 None:intergenic 45.0%
!! CTTCGAAGATGAGAGTATCG+AGG - chr5.2:7387934-7387953 MS.gene09594:CDS 45.0%
!! GCAGCGAATTTTGACCATTC+TGG - chr5.2:7390886-7390905 MS.gene09594:intron 45.0%
!! GTGATGGATTCGTAGAGAGA+GGG + chr5.2:7387458-7387477 None:intergenic 45.0%
!! TTGAGGGCATCCATATAGCA+TGG + chr5.2:7389748-7389767 None:intergenic 45.0%
!! TTGGGTTGAGTGATCAGCTT+GGG - chr5.2:7388041-7388060 MS.gene09594:CDS 45.0%
!! TTTGGGTTGAGTGATCAGCT+TGG - chr5.2:7388040-7388059 MS.gene09594:CDS 45.0%
!!! CCTGATGTAGTTTTGGCACT+GGG - chr5.2:7392347-7392366 MS.gene09594:CDS 45.0%
!!! AATTATAATTTTGTTTTAAA+AGG - chr5.2:7391545-7391564 MS.gene09594:intron 5.0%
AGATCCCGATGCCTCAAAAG+AGG - chr5.2:7388908-7388927 MS.gene09594:CDS 50.0%
AGGAGCAAAACACATGGCAG+TGG + chr5.2:7392012-7392031 None:intergenic 50.0%
AGGGGTTGCTTGAACCTCTT+TGG - chr5.2:7392828-7392847 MS.gene09594:CDS 50.0%
ATGCGTTTCGCATCCGAGAA+AGG - chr5.2:7387661-7387680 MS.gene09594:CDS 50.0%
ATGGATTCGTAGAGAGAGGG+AGG + chr5.2:7387455-7387474 None:intergenic 50.0%
CAACCGTCATTTGCAGAGCA+AGG + chr5.2:7390374-7390393 None:intergenic 50.0%
CCCAGTGCCAAAACTACATC+AGG + chr5.2:7392350-7392369 None:intergenic 50.0%
CTCAATAGTGCCCATTGAGG+AGG - chr5.2:7389507-7389526 MS.gene09594:intron 50.0%
CTCCTCAATGGGCACTATTG+AGG + chr5.2:7389509-7389528 None:intergenic 50.0%
GAAATCAACGATTCGCGCTC+CGG + chr5.2:7387815-7387834 None:intergenic 50.0%
GACCCTTGCTCTGCAAATGA+CGG - chr5.2:7390368-7390387 MS.gene09594:CDS 50.0%
GCGATTACATGCCTCCTCAA+TGG + chr5.2:7389521-7389540 None:intergenic 50.0%
GTAGCTGTAACACTGTGGGA+TGG + chr5.2:7390078-7390097 None:intergenic 50.0%
GTATGGACGGAAGTCGATGT+TGG - chr5.2:7388099-7388118 MS.gene09594:CDS 50.0%
GTCGATGTTGGAGGCTTATG+GGG - chr5.2:7388111-7388130 MS.gene09594:CDS 50.0%
GTGCCAGAAGATTCAAGGAG+TGG - chr5.2:7388160-7388179 MS.gene09594:CDS 50.0%
GTGCTCTCTGCAGTGAATGA+AGG - chr5.2:7392476-7392495 MS.gene09594:CDS 50.0%
GTTCGCAGATTCCGTATGGA+CGG - chr5.2:7388086-7388105 MS.gene09594:CDS 50.0%
GTTGAGTGATCAGCTTGGGA+AGG - chr5.2:7388045-7388064 MS.gene09594:CDS 50.0%
TATGACTTTCGAGGCCTGGT+TGG - chr5.2:7388612-7388631 MS.gene09594:intron 50.0%
TCCCTCAATAGTGCCCATTG+AGG - chr5.2:7389504-7389523 MS.gene09594:intron 50.0%
TGCAAGTATGCCATCTCGGA+AGG - chr5.2:7389586-7389605 MS.gene09594:intron 50.0%
TGCTTCAGCATGAGGATACC+AGG - chr5.2:7390220-7390239 MS.gene09594:CDS 50.0%
TGGATTCGTAGAGAGAGGGA+GGG + chr5.2:7387454-7387473 None:intergenic 50.0%
TGTGTGATTCCTGTAGGTGG+TGG - chr5.2:7389396-7389415 MS.gene09594:intron 50.0%
TTTAGACGCTCCTTCCGAGA+TGG + chr5.2:7389599-7389618 None:intergenic 50.0%
! AAGGTGCTCTGTCCAAGACT+GGG - chr5.2:7389194-7389213 MS.gene09594:intron 50.0%
! AGCTACAGGAGGTTGATCAC+TGG + chr5.2:7389449-7389468 None:intergenic 50.0%
! ATAGGCAGCCTTATGCAGCA+GGG + chr5.2:7390025-7390044 None:intergenic 50.0%
! ATCGGATTGGGAACTGGGTT+CGG + chr5.2:7387588-7387607 None:intergenic 50.0%
! GGGAGGGGTTTGGAGATTTT+CGG + chr5.2:7387525-7387544 None:intergenic 50.0%
! GTCTTGGACAGAGCACCTTA+AGG + chr5.2:7389193-7389212 None:intergenic 50.0%
! GTGATACTGACTGATTCCGG+TGG - chr5.2:7392197-7392216 MS.gene09594:CDS 50.0%
! GTTAGCTTCTGAGCTACAGG+AGG + chr5.2:7389460-7389479 None:intergenic 50.0%
! TAAGGTGCTCTGTCCAAGAC+TGG - chr5.2:7389193-7389212 MS.gene09594:intron 50.0%
! TCAGCTTGGGAAGGAGCTTT+TGG - chr5.2:7388054-7388073 MS.gene09594:CDS 50.0%
!! CACTGCAGAGAGCACAGTTT+TGG + chr5.2:7392471-7392490 None:intergenic 50.0%
!! GGTGATGGATTCGTAGAGAG+AGG + chr5.2:7387459-7387478 None:intergenic 50.0%
!! GTTCGGTGGTGGTGTTTTTG+CGG + chr5.2:7387571-7387590 None:intergenic 50.0%
!! TGAGGCATCGGGATCTTCAA+GGG + chr5.2:7388904-7388923 None:intergenic 50.0%
!! TGGTGTTTTTGCGGGAAGAG+CGG + chr5.2:7387562-7387581 None:intergenic 50.0%
!! TTCGGTGGTGGTGTTTTTGC+GGG + chr5.2:7387570-7387589 None:intergenic 50.0%
!! TTGAGGCATCGGGATCTTCA+AGG + chr5.2:7388905-7388924 None:intergenic 50.0%
!!! GCCTGATGTAGTTTTGGCAC+TGG - chr5.2:7392346-7392365 MS.gene09594:CDS 50.0%
ATCAGGCAGCCAAGGCTTTG+CGG + chr5.2:7392333-7392352 None:intergenic 55.0%
CATCGAGAACCACCACCTAC+AGG + chr5.2:7389408-7389427 None:intergenic 55.0%
GCTGGGTACCCAAGTAATGG+AGG - chr5.2:7391369-7391388 MS.gene09594:intron 55.0%
TGGACGGAAGTCGATGTTGG+AGG - chr5.2:7388102-7388121 MS.gene09594:CDS 55.0%
TTGTTGCAGCCGCAAAGCCT+TGG - chr5.2:7392321-7392340 MS.gene09594:CDS 55.0%
! GATAGGCAGCCTTATGCAGC+AGG + chr5.2:7390026-7390045 None:intergenic 55.0%
!! AGGCATCGGGATCTTCAAGG+GGG + chr5.2:7388902-7388921 None:intergenic 55.0%
!! GAGGCATCGGGATCTTCAAG+GGG + chr5.2:7388903-7388922 None:intergenic 55.0%
!! TGTTTTTGCGGGAAGAGCGG+CGG + chr5.2:7387559-7387578 None:intergenic 55.0%
CGAGCACGTGCTCAACTGCT+TGG - chr5.2:7391191-7391210 MS.gene09594:CDS 60.0%
GGATTGGGAACTGGGTTCGG+TGG + chr5.2:7387585-7387604 None:intergenic 60.0%
!! TTGGGAACTGGGTTCGGTGG+TGG + chr5.2:7387582-7387601 None:intergenic 60.0%
TTTGCGGGAAGAGCGGCGGA+GGG + chr5.2:7387555-7387574 None:intergenic 65.0%
! TTTTGCGGGAAGAGCGGCGG+AGG + chr5.2:7387556-7387575 None:intergenic 65.0%
GGAAGAGCGGCGGAGGGTGG+CGG + chr5.2:7387549-7387568 None:intergenic 75.0%
! GGGTGGCGGTGGGAGGGGTT+TGG + chr5.2:7387535-7387554 None:intergenic 75.0%
! GCGGGAAGAGCGGCGGAGGG+TGG + chr5.2:7387552-7387571 None:intergenic 80.0%
!! AGAGCGGCGGAGGGTGGCGG+TGG + chr5.2:7387546-7387565 None:intergenic 80.0%
!! GAGCGGCGGAGGGTGGCGGT+GGG + chr5.2:7387545-7387564 None:intergenic 80.0%
!! GCGGAGGGTGGCGGTGGGAG+GGG + chr5.2:7387540-7387559 None:intergenic 80.0%
!! GGCGGAGGGTGGCGGTGGGA+GGG + chr5.2:7387541-7387560 None:intergenic 80.0%
!! CGGCGGAGGGTGGCGGTGGG+AGG + chr5.2:7387542-7387561 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 7387305 7392904 7387305 ID=MS.gene09594
chr5.2 mRNA 7387305 7392904 7387305 ID=MS.gene09594.t1;Parent=MS.gene09594
chr5.2 exon 7391852 7392904 7391852 ID=MS.gene09594.t1.exon1;Parent=MS.gene09594.t1
chr5.2 CDS 7391852 7392904 7391852 ID=cds.MS.gene09594.t1;Parent=MS.gene09594.t1
chr5.2 exon 7390899 7391363 7390899 ID=MS.gene09594.t1.exon2;Parent=MS.gene09594.t1
chr5.2 CDS 7390899 7391363 7390899 ID=cds.MS.gene09594.t1;Parent=MS.gene09594.t1
chr5.2 exon 7389733 7390797 7389733 ID=MS.gene09594.t1.exon3;Parent=MS.gene09594.t1
chr5.2 CDS 7389733 7390797 7389733 ID=cds.MS.gene09594.t1;Parent=MS.gene09594.t1
chr5.2 exon 7388819 7389038 7388819 ID=MS.gene09594.t1.exon4;Parent=MS.gene09594.t1
chr5.2 CDS 7388819 7389038 7388819 ID=cds.MS.gene09594.t1;Parent=MS.gene09594.t1
chr5.2 exon 7387305 7388278 7387305 ID=MS.gene09594.t1.exon5;Parent=MS.gene09594.t1
chr5.2 CDS 7387305 7388278 7387305 ID=cds.MS.gene09594.t1;Parent=MS.gene09594.t1
Gene Sequence

>MS.gene09594

ATGGAGAAGAAGCTTCGTTCATCTCTCAATTCTTCACCACAAGAATTCATCTCTTTAGCCACAACCTTAACCCTAAAATCCTCTAAATCCTCTCTCAAAACCCTAATTCATTCAATCAAACCCTCTTCCAATCTCATTTCTTCACTCCCTCCCTCTCTCTACGAATCCATCACCACCACAATTCAATCCTTCCTCAATCTTCTCGAATCGAACAATTCCGAAAATCTCCAAACCCCTCCCACCGCCACCCTCCGCCGCTCTTCCCGCAAAAACACCACCACCGAACCCAGTTCCCAATCCGATGAAAAACATAAAATTCTCGAAAAACTTCAAATTCTCGCTCACATTTCGTTTCTATGCGTTTCGCATCCGAGAAAGGTTTTTGATTTTTCTGATTTGCTACCTGGAGTTCAAGCATTGCATGATAATTTGATTGTTTTGGAAGCGGATTCGATTTTGTCTTCGGGGATTGAGACTATATGTGAAGAATGGTGGAAGGAGAATTTGCCGGAGCGCGAATCGTTGATTTCTCAGACATTACCTTTTGTTCTATCGAGATCGTTGACATTGAAGAAAAAAGTGGATGTGCATAGGGTTTATATGTTTCGCGAGGCTTTCGCGTTGTTTGACTTCGAAGATGAGAGTATCGAGGATTTGAAACTGTTGTTAAACAGGTGTGTAATTTCGCCTTTATATTTGAAAACAGAAGATGGAAGAAAGTTTCTGGCTTTTTTGTTTGGGTTGAGTGATCAGCTTGGGAAGGAGCTTTTGGCGATGATTCGTTCGCAGATTCCGTATGGACGGAAGTCGATGTTGGAGGCTTATGGGGATATATTGTTTCGAGCATGGAAAGCTGTGCCAGAAGATTCAAGGAGTGGAATTGAGAATGGGTTCTTGCAGGATTTGATTGAGGGTTCTATCCATGCAAGTTCTGGAACTTTTGCTTTGTATATTAGAAGGGTTTTGGGAGGGTTTATTAATCAGAGGACCGTAGATGGGGTTGAGAAACTACTCTATCGACTTGCCGAGCCAGTCATATTTCGGTCTCTGCAGGTAAATGCATTGTCAAAGTCATCTTTTTCCCAGCATACATTTTACTGTGTTTGAATGTTGATTTTGTAAATTTTCCATCTGAAGTCTTTGCATTACACTGGTGCTTAAGAAAATGTTTGTGCAACATTGGATTGGTCCTTAAATTTTCATAAAAGTGATTGTTTGCCGTGATGCTATGTTGTAAGCTTATGAGTTTCACAAATCTCTTTAGATGCCTTGTATGCATTATAATCTTAACTTGTATGCTGTAATCTTATGACTTTCGAGGCCTGGTTGGTATACCAGCTTATAATCAAGTTGAGCTCTCTTAAATTTGGGTTTTCTTTTTATAAAAAAAGGAGTATTTCTTAGAAAAGAAAATGCTTTTTGTTTTGGATTAGCAGTTTCGTAAATTGTAATAAGTAATGGGTATGAGCTATGACATCTAAAATAATGCGTGATTTGCGTTTCTATGTTCAGAATTTTACTTTACCTTCTTTTCAATATAGGCTGCAAACTCAAATGTTCGACAGAATGCTTTGCATCTGCTTTTGGACATATTCCCCCTTGAAGATCCCGATGCCTCAAAAGAGGATAAGGATACATTGCTTGATAAGCAGTTCTTTTTGTTAGAAAAGTTGCTTGTTGACGATTGTCCAGAAGTTAGAACAATTGCTGTTGAGGGTTCTTGTCGTGTCCTTCATCTATTTTGGGAAATTATTCCGTCACCAATTATAACAAAGATGCTTACAAAAGTAATTAGTGACATGTCTCATGATGTATGCAACGAGGTAAGGCTTTCTACGTTGAATGGCATCATTTATTTGCTTGACAATCCCCACTCTCATGAAGTCCTTAAGGTGCTCTGTCCAAGACTGGGTCACTTAATGCTGGATAATGTCCTCACAGTACAAGTTGCTATGGCAGAGCTCTTGCTCCATCTAAATGATATTCAAAATTTTCAGTTTAACAAGGTACATAGATTCTTAAACTCGCCTAATTCCCGTATCTAATGTACTTGCTAATATAATCAATTCTCACTGGTTAGCTGGACGTTGTTGTGTGATTCCTGTAGGTGGTGGTTCTCGATGTGCTTTTGTCTGTGCTTGCCAGTGATCAACCTCCTGTAGCTCAGAAGCTAACAAAACTGCTTATACCTTCGTACTTTCCCTCAATAGTGCCCATTGAGGAGGCATGTAATCGCTGCATTACACTAGTAAAAAGGTCTCCAATGGCCGGTGCAATATTTTGCAAGTATGCCATCTCGGAAGGAGCGTCTAAAACTCATCTTATGGAACTGGTCAAAGCATTCCTGAGTTTGGTTTTGTCACAAGATAAGCTGAATGCAGATCAGATAGAGGGCTTTCTTATTGCTGCTAGCTATCTTTGTGATAACTTAGTCAGTGAACCATGCTATATGGATGCCCTCAAAGAGTTACTTACTGCAGAGAAAGTGGAAGGTTTACTAACTGGGGCATCTACAGAACAAGCTCAATCATCTTTATTCAACATTTTCTCCACTGTTTGTCCAGATAATGTGGCAGGACTTCTTGAAGAGTGCATGAGTGTTGTCACAAACTGCCATGGTTTACCTGAAGATGTTGATCGCCAATCTAAAATTAGGTCTGCACATAAGTTGTTGCTTTCTTTGGGAGGTTTTGATGACATGTTTGAAGCCTTAACAACCCTGCTGCATAAGGCTGCCTATCGTTGTCACATTAAATTTGGGGCAGACATGCCATCCCACAGTGTTACAGCTACTAAAAGGAAAAAATCTAAATCCTCTGGAAAATTTTCAATTAAATCGAAGATAATTAACAGAAAGCAATCTTTTGAAGATGATTATTTAGTAGCTGTAGGAGTTGCATGGCAAGTTAGAGACTTGCTTCAGCATGAGGATACCAGGAAAGCAATCTTTAGATCTCAACCTTTAGAAATGTTGTTTTTTTCGCTTAAGATGGTATCTGAAGTCAGCATTGAGCATTGTGGGCAGTATGAATACATAGACATATCTCCTGTTTTGGCATATATGACCCTTGCTCTGCAAATGACGGTTGATAATGTTGGCACAAGTAGTGAAAAGAATGGTGATTCCAAGGGGAAGAAAACTAAGATTGATTCTTCTACATTACTTTCAGAGGCAAGTACACTCGTTTTGTACATAGTTTTATTGGATTGTTAGATGTTTAAAATTCATCTACCCTCTGGTTGTGCATTTTCTTCTGTTGCTTTGCATGTCAAAGCCAAATTGCTGGTATTCATTGCAAGTTTGTATTCGTTTGACTTAAAAACACGCTTTTCCTAAATTGCTTGTTTCATTTTAACGTGGCTGTAGAAATCCTTTCATTCCCAATTTGCACTGTGCTAGTTTATGTGTCTCACACAACCATTTTTACGAATTATAGAGGTCGGACGTCTCTTTTATTGCTAGATTAGTCGTGACCTTGTGATTTTGTTTTGCATTCTTACATTGAGCACCTTTTACTCAATGCATCACTTATATGATGCTTCAACTTCTTTTTTTCTTATGGTGTCTGAATCTTTTCTGTGCAGCGAATTTTGACCATTCTGGCCTGCTATAATTTCACGTCAATTTAATGACTAATATAAGTTTTCCTGGATTTTGGTTGTCTGCATCTTTTGTTCAGTTTCATTGGTTAATTTTCAATTGTCTGGCAAAATGTTTAAATTGTTTTTTCCCTTGAAATTTTCAGGTTTCCGGCATGATTGTTATGATATTGTAATCATAGTATCATACATACCTAGCTCACTCATTCATTTAACTTGAGTCCTTCCATTGTATTGATGAATTGATGTTTTTTTTTTTTAAACAGACTGTATTGGATCTGACAATCGAGCACGTGCTCAACTGCTTGGAAAAACTATTTGGATCAGATGACACTGTACAATATCACAATGTGGATTCACATAACTTGGAGTCAACAACTGGGAAAAATCGAAGTTCCAAAAAAAGGAAGAAAACAGGGAAAAATCAAAATTCCACAAAAAGGCGAAGGCTATCTCTGACAAATGCTGGGTACCCAAGTAATGGAGGTGAGAAAATACATTCATATTTCATATATTATACATATTGTAGTTATAATGGAATGTGTTGCTTTGACCAAATGCATGCAACTTGAGCACACTGTGCGAAATAGGAAAAAAGCTCAAGCACAATTCAATGCTTCAATTGTTTCCATCTCAGTCAAATTATAATTTTGTTTTAAAAGGTTTGTCTGTATAAATAGTTAGATGGGTAATTGGGTAGACATATGGGTATTAATATTCACAGATTTCTAGTTCTATTTTGAATTCTGGCCACTTCTCTACAGGTTTCTTCTCTTATGATTTGACCATTGTATTTTCAAGTCATTATTAGGCGTTTCATTTGTGAAGGAATATGGCCCTTTTGGCTAATCCACACTATAAAATCCGGCATCTATCTGTTTTCATTTGATTTAACCATGTGTTTGGCTCTTTTTGTTAATTCTGATTAAAACATTACAAGTACAATTTGAAGCTTTGAACTATGTGTATCGTCTCTGGATATATATCTAGTCGTTTGTGACTAATTGTCTAAATCTTTTTGTATAGGATCTGTACACAATGAACCTCAACAAGTGCTTTGTAAGGTGAAGATGATTACTGCTGTTCTGAAGTTCATGGCTGATGCCACTGCCATGTGTTTTGCTCCTCACAACAATGGATTATTCTTGAATAATACCTCAAAATGCATACAACATATCTTGTCTTCATTGAACCAGCTGTATCATCACAGAATTGAATTTGAGGAAGAGGATAAAAAAAATACTATATTTTGCCTGAAAAGCTCTTTCAGCTATGCTGCAAAAATACTCAATGTGATACTGACTGATTCCGGTGGATCCTCCATAATGACATCAAAAGCCTTCACTCTTGCCAATAACTTGCTTGATTTAATTGTTTCAACTGAATCATGTTTGGGCTCTGCATATGCATCACGTCTTGTTGCAGCCGCAAAGCCTTGGCTGCCTGATGTAGTTTTGGCACTGGGATCTGAAAGTGTTCTACAACACACCGAAAGTGGAAGTGAACATTTAACTGCTTCTGAACAAATGAAGTTACAATTTCCAAAATGGCCCTTGATTGTAGCCAAAACTGTGCTCTCTGCAGTGAATGAAGGTGAAGGATATGGTGAATGCTCTCAACCAGATAAATTCTCGACATTCAATAAACTTACGGCTATGCTGGTTATATTACTTAAAAAGAATAAGAGTATAATGGATGCAGTTGGGGATATTTTCTTGGTTTGTTCACTTGTTGGGCTAGAACAAAAGGACTTTGAGCTGGCATTAGGACTCTTGCAGTTTGTATGTTCCAAGTTGTTTAATCGTGATGACAGGGATTGGGGTGACATGATGTTATCTTCTCTGGAAGAAATCTATCATAAGATAGAGAGGCAAATTACAGAAGCTAGTAATAACGATGAACTGGAGAAATTGATGCATGTAAAGGGGTTGCTTGAACCTCTTTGGACGTATCATCTATATGAAACTGGAAAGGTCAACATGACTGATGACTATAATTAG
Protein sequence

>MS.gene09594.t1

MEKKLRSSLNSSPQEFISLATTLTLKSSKSSLKTLIHSIKPSSNLISSLPPSLYESITTTIQSFLNLLESNNSENLQTPPTATLRRSSRKNTTTEPSSQSDEKHKILEKLQILAHISFLCVSHPRKVFDFSDLLPGVQALHDNLIVLEADSILSSGIETICEEWWKENLPERESLISQTLPFVLSRSLTLKKKVDVHRVYMFREAFALFDFEDESIEDLKLLLNRCVISPLYLKTEDGRKFLAFLFGLSDQLGKELLAMIRSQIPYGRKSMLEAYGDILFRAWKAVPEDSRSGIENGFLQDLIEGSIHASSGTFALYIRRVLGGFINQRTVDGVEKLLYRLAEPVIFRSLQAANSNVRQNALHLLLDIFPLEDPDASKEDKDTLLDKQFFLLEKLLVDDCPEVRTIAVEGSCRVLHLFWEIIPSPIITKMLTKVISDMSHDVCNEVRLSTLNGIIYLLDNPHSHEVLKVLCPRLGHLMLDNVLTVQVAMAELLLHLNDIQNFQFNKVVVLDVLLSVLASDQPPVAQKLTKLLIPSYFPSIVPIEEACNRCITLVKRSPMAGAIFCKYAISEGASKTHLMELVKAFLSLVLSQDKLNADQIEGFLIAASYLCDNLVSEPCYMDALKELLTAEKVEGLLTGASTEQAQSSLFNIFSTVCPDNVAGLLEECMSVVTNCHGLPEDVDRQSKIRSAHKLLLSLGGFDDMFEALTTLLHKAAYRCHIKFGADMPSHSVTATKRKKSKSSGKFSIKSKIINRKQSFEDDYLVAVGVAWQVRDLLQHEDTRKAIFRSQPLEMLFFSLKMVSEVSIEHCGQYEYIDISPVLAYMTLALQMTVDNVGTSSEKNGDSKGKKTKIDSSTLLSETVLDLTIEHVLNCLEKLFGSDDTVQYHNVDSHNLESTTGKNRSSKKRKKTGKNQNSTKRRRLSLTNAGYPSNGGSVHNEPQQVLCKVKMITAVLKFMADATAMCFAPHNNGLFLNNTSKCIQHILSSLNQLYHHRIEFEEEDKKNTIFCLKSSFSYAAKILNVILTDSGGSSIMTSKAFTLANNLLDLIVSTESCLGSAYASRLVAAAKPWLPDVVLALGSESVLQHTESGSEHLTASEQMKLQFPKWPLIVAKTVLSAVNEGEGYGECSQPDKFSTFNKLTAMLVILLKKNKSIMDAVGDIFLVCSLVGLEQKDFELALGLLQFVCSKLFNRDDRDWGDMMLSSLEEIYHKIERQITEASNNDELEKLMHVKGLLEPLWTYHLYETGKVNMTDDYN