AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23047

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23047.t1 MTR_7g107200 47.354 378 154 3 22 354 1 378 9.34e-115 338
MS.gene23047.t1 MTR_7g107160 55.652 345 122 11 24 354 120 447 6.41e-107 320
MS.gene23047.t1 MTR_7g107160 67.033 91 30 0 89 179 1 91 2.53e-33 128
MS.gene23047.t1 MTR_1g042160 50.151 331 140 5 22 350 1 308 1.36e-103 307
MS.gene23047.t1 MTR_8g011730 36.901 355 176 9 32 351 12 353 1.35e-68 219
MS.gene23047.t1 MTR_7g107170 58.385 161 59 1 190 350 111 263 4.74e-53 176
MS.gene23047.t1 MTR_7g107170 78.161 87 19 0 255 341 1 87 9.17e-37 134
MS.gene23047.t1 MTR_2g034780 41.096 146 83 1 200 345 119 261 9.74e-31 118
MS.gene23047.t1 MTR_1g041240 39.231 130 77 1 34 163 59 186 8.47e-27 112
MS.gene23047.t1 MTR_1g041240 39.231 130 77 1 34 163 58 185 8.79e-27 112
MS.gene23047.t1 MTR_1g041240 39.231 130 77 1 34 163 57 184 8.87e-27 112
MS.gene23047.t1 MTR_3g079840 38.462 130 77 2 34 162 56 183 1.89e-26 111
MS.gene23047.t1 MTR_3g079840 38.462 130 77 2 34 162 57 184 1.91e-26 111
MS.gene23047.t1 MTR_5g086700 36.923 130 79 2 34 162 61 188 2.64e-25 107
MS.gene23047.t1 MTR_5g086700 36.923 130 79 2 34 162 61 188 2.74e-25 107
MS.gene23047.t1 MTR_5g091450 34.921 126 80 2 34 158 33 157 4.66e-22 98.2
MS.gene23047.t1 MTR_5g091180 32.258 155 95 4 34 187 46 191 2.02e-18 87.0
MS.gene23047.t1 MTR_5g091550 31.613 155 95 3 32 185 17 161 4.11e-18 85.5
MS.gene23047.t1 MTR_5g091550 32.353 136 89 2 32 166 17 150 9.08e-18 84.7
MS.gene23047.t1 MTR_3g106700 27.811 169 108 2 8 162 376 544 4.45e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23047.t1 AT5G06600 41.538 130 73 2 34 162 56 183 2.92e-27 113
MS.gene23047.t1 AT5G06600 41.538 130 73 2 34 162 55 182 3.54e-27 113
MS.gene23047.t1 AT5G06600 41.538 130 73 2 34 162 56 183 3.54e-27 113
MS.gene23047.t1 AT3G11910 40.769 130 74 2 34 162 55 182 1.89e-26 111
MS.gene23047.t1 AT3G11910 40.769 130 74 2 34 162 55 182 1.89e-26 111
MS.gene23047.t1 AT3G11910 40.769 130 74 2 34 162 54 181 1.96e-26 111
MS.gene23047.t1 AT3G11910 40.769 130 74 2 34 162 54 181 1.96e-26 111
MS.gene23047.t1 AT3G58250 26.866 335 194 11 22 338 1 302 1.39e-18 85.5
MS.gene23047.t1 AT3G58410 33.858 127 78 3 33 158 7 128 1.13e-16 80.1
MS.gene23047.t1 AT3G58340 32.031 128 82 3 33 158 7 131 2.63e-15 76.3
MS.gene23047.t1 AT3G58340 32.031 128 82 3 33 158 7 131 3.17e-15 75.9
MS.gene23047.t1 AT3G44790 25.641 312 207 9 32 329 3 303 6.03e-15 75.1
MS.gene23047.t1 AT3G58210 31.250 128 87 1 34 160 8 135 9.87e-15 74.7
MS.gene23047.t1 AT3G58350 32.061 131 85 3 33 160 7 136 1.06e-14 74.3
MS.gene23047.t1 AT3G58350 32.061 131 85 3 33 160 7 136 1.06e-14 74.3
MS.gene23047.t1 AT3G58270 25.157 318 184 10 34 317 8 305 2.53e-14 73.6
MS.gene23047.t1 AT3G58270 25.157 318 184 10 34 317 8 305 2.53e-14 73.6
MS.gene23047.t1 AT3G58270 25.157 318 184 10 34 317 8 305 2.53e-14 73.6
MS.gene23047.t1 AT3G58410 33.071 127 65 3 33 158 28 135 1.72e-13 70.9
MS.gene23047.t1 AT3G58370 33.333 129 80 4 34 158 9 135 1.76e-13 70.5
MS.gene23047.t1 AT3G44800 30.769 130 88 2 32 160 3 131 5.41e-13 69.7
MS.gene23047.t1 AT3G58260 27.517 298 177 10 35 325 9 274 3.42e-12 67.0
MS.gene23047.t1 AT2G05410 31.496 127 85 2 35 160 9 134 4.23e-12 66.6
MS.gene23047.t1 AT2G25320 27.848 158 103 2 34 181 405 561 9.92e-12 67.0
MS.gene23047.t1 AT2G25320 27.848 158 103 2 34 181 404 560 1.00e-11 67.0
MS.gene23047.t1 AT2G25320 27.848 158 103 2 34 181 405 561 1.49e-11 66.2
MS.gene23047.t1 AT3G58200 33.621 116 73 3 34 147 8 121 2.78e-11 64.3
MS.gene23047.t1 AT3G58360 30.000 140 90 3 22 160 1 133 7.28e-11 62.8
MS.gene23047.t1 AT3G17380 27.206 136 93 2 39 168 26 161 8.94e-11 62.8

Find 67 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAAGGATCTTCAAACTTTC+TGG 0.140117 7.2:+7125716 MS.gene23047:CDS
CCATGAGCTCACTTACATTT+TGG 0.177848 7.2:-7125501 None:intergenic
CAAGTCAAATTGAAATTAAA+TGG 0.236977 7.2:-7125751 None:intergenic
CTTCTTCTAGCTTTGGCCTT+AGG 0.245031 7.2:-7125471 None:intergenic
ATGGAATAAAGCTTGGAATA+TGG 0.257239 7.2:+7124496 MS.gene23047:CDS
AGAAAAGAAGTCGCAAGTTT+AGG 0.259373 7.2:+7125614 MS.gene23047:CDS
CCTAGTGTTCAATCGGCTTT+AGG 0.267455 7.2:+7125781 MS.gene23047:CDS
CTCGCACCTTTCTTGTCTTA+AGG 0.292864 7.2:-7125675 None:intergenic
GGAATGGGCGTTCACTGCTT+TGG 0.299493 7.2:+7125636 MS.gene23047:CDS
CCTTGGCCTTCTTCTAGCTT+TGG 0.325091 7.2:-7125478 None:intergenic
GAATGGGCGTTCACTGCTTT+GGG 0.331310 7.2:+7125637 MS.gene23047:CDS
GAAAAGAAGTCGCAAGTTTA+GGG 0.346429 7.2:+7125615 MS.gene23047:CDS
TTCTTCTAGCTTTGGCCTTA+GGG 0.362417 7.2:-7125470 None:intergenic
TTCTATGTGTCCCATACCCT+TGG 0.390125 7.2:-7125527 None:intergenic
TTCACAATAAACCCCTTGTT+AGG 0.392129 7.2:-7125361 None:intergenic
TGATGCTGCAAGAGACTTGT+TGG 0.396572 7.2:+7125921 MS.gene23047:CDS
TAAGGATCTTCAAACTTTCT+GGG 0.397628 7.2:+7125717 MS.gene23047:CDS
TATGAATGACTTGGCTTGTA+AGG 0.404544 7.2:+7125699 MS.gene23047:CDS
TGGAATAAAGCTTGGAATAT+GGG 0.416500 7.2:+7124497 MS.gene23047:CDS
GCTCATGGATTCCAAGGGTA+TGG 0.447022 7.2:+7125516 MS.gene23047:CDS
CCTAAAGCCGATTGAACACT+AGG 0.454981 7.2:-7125781 None:intergenic
CATTTAATTTCAATTTGACT+TGG 0.459388 7.2:+7125752 MS.gene23047:CDS
GTTAGAGCCTAGTGTTCAAT+CGG 0.460269 7.2:+7125774 MS.gene23047:CDS
AGGATGATTTATCTGTCTAA+AGG 0.463873 7.2:+7124754 MS.gene23047:intron
ATGGATTTGGATGCTGAACT+AGG 0.469976 7.2:+7125964 MS.gene23047:CDS
GGTAGCTCAAGAGTTGGAAT+TGG 0.485466 7.2:+7125858 MS.gene23047:CDS
GGATAGCCGCCTAGGACAAA+AGG 0.485898 7.2:-7124608 None:intergenic
AGCAACGTTGCAATCACAAA+AGG 0.487829 7.2:+7124898 MS.gene23047:CDS
CCAAAATGTAAGTGAGCTCA+TGG 0.490013 7.2:+7125501 MS.gene23047:CDS
ACTCTACATGGAATAAAGCT+TGG 0.491560 7.2:+7124489 MS.gene23047:CDS
AAGTCGCAAGTTTAGGGAAT+GGG 0.503721 7.2:+7125621 MS.gene23047:CDS
TTATTTCCTTAAGACAAGAA+AGG 0.506188 7.2:+7125669 MS.gene23047:CDS
TTGTCCTAGGCGGCTATCCA+TGG 0.509014 7.2:+7124612 MS.gene23047:CDS
AGAAAAGCTAAAGGATAATG+TGG 0.523643 7.2:+7125837 MS.gene23047:CDS
TGCTGGCACTCAATAAGTGA+AGG 0.542266 7.2:-7125592 None:intergenic
CTAAGGCCAAAGCTAGAAGA+AGG 0.558810 7.2:+7125472 MS.gene23047:CDS
TAATGTGGTAGCTCAAGAGT+TGG 0.559742 7.2:+7125852 MS.gene23047:CDS
AAGTGAGCTCATGGATTCCA+AGG 0.561824 7.2:+7125510 MS.gene23047:CDS
ATGATTTATCTGTCTAAAGG+TGG 0.562064 7.2:+7124757 MS.gene23047:CDS
CTCATGGATTCCAAGGGTAT+GGG 0.563344 7.2:+7125517 MS.gene23047:CDS
AAACATACTTCATCTAGTAA+TGG 0.564644 7.2:-7125562 None:intergenic
CATACCATGGATAGCCGCCT+AGG 0.565038 7.2:-7124616 None:intergenic
GCAAACTGCGAATATGTTTG+AGG 0.565917 7.2:+7124825 MS.gene23047:CDS
AAAAGTTTGAGAAATTTACA+TGG 0.568464 7.2:+7124540 MS.gene23047:CDS
GAATTTCTCTCGCTTGAACA+AGG 0.568755 7.2:+7124571 MS.gene23047:CDS
GAAGTCGCAAGTTTAGGGAA+TGG 0.569896 7.2:+7125620 MS.gene23047:CDS
AGAAGTTTGAGAACTCTACA+TGG 0.576561 7.2:+7124477 MS.gene23047:CDS
TCTAAAGGTGGGAGGAACAC+AGG 0.578325 7.2:+7124769 MS.gene23047:CDS
GCCGCCTAGGACAAAAGGCT+CGG 0.579082 7.2:-7124603 None:intergenic
AAAGGAGGTAGAAAAGCTAA+AGG 0.580307 7.2:+7125828 MS.gene23047:CDS
TTCATCTAGTAATGGAACAA+AGG 0.580421 7.2:-7125554 None:intergenic
CTGCGAATATGTTTGAGGGA+TGG 0.586576 7.2:+7124830 MS.gene23047:CDS
GAGAAACGACTAAATCAAGA+AGG 0.587356 7.2:+7125433 MS.gene23047:CDS
GTAACTTAACTGCTTCCCTA+AGG 0.589330 7.2:+7125455 MS.gene23047:CDS
CTCAAGAGTTGGAATTGGAG+AGG 0.595626 7.2:+7125863 MS.gene23047:CDS
TGATTTATCTGTCTAAAGGT+GGG 0.600271 7.2:+7124758 MS.gene23047:CDS
TGAGCTTCATGATCCTAACA+AGG 0.607224 7.2:+7125348 MS.gene23047:CDS
CAAACTGCGAATATGTTTGA+GGG 0.611736 7.2:+7124826 MS.gene23047:CDS
GGTGCGAGATATGAATGACT+TGG 0.624462 7.2:+7125690 MS.gene23047:CDS
TGCTGCAAGAGACTTGTTGG+AGG 0.627839 7.2:+7125924 MS.gene23047:CDS
GCTGGCACTCAATAAGTGAA+GGG 0.632129 7.2:-7125591 None:intergenic
AGCTTCATGATCCTAACAAG+GGG 0.641496 7.2:+7125350 MS.gene23047:CDS
CCAAAGCTAGAAGAAGGCCA+AGG 0.642510 7.2:+7125478 MS.gene23047:CDS
GAGCTTCATGATCCTAACAA+GGG 0.645789 7.2:+7125349 MS.gene23047:CDS
AGTGAGCTCATGGATTCCAA+GGG 0.660252 7.2:+7125511 MS.gene23047:CDS
TTTATCTGTCTAAAGGTGGG+AGG 0.684955 7.2:+7124761 MS.gene23047:CDS
GGATCTTCAAACTTTCTGGG+AGG 0.688818 7.2:+7125720 MS.gene23047:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCTTTAATTTCATTATTATA+AGG - chr7.2:7125064-7125083 None:intergenic 10.0%
!! AATTTCATTATTATACTAAC+TGG - chr7.2:7125040-7125059 None:intergenic 15.0%
!! AAAAGTTTGAGAAATTTACA+TGG + chr7.2:7124540-7124559 MS.gene23047:CDS 20.0%
!! ATCTAATAAATTGTAACATG+TGG - chr7.2:7124662-7124681 None:intergenic 20.0%
!! CAAGTCAAATTGAAATTAAA+TGG - chr7.2:7125754-7125773 None:intergenic 20.0%
!! CATGTTACAATTTATTAGAT+CGG + chr7.2:7124662-7124681 MS.gene23047:intron 20.0%
!! TTAAATAATTGTTTGTAGAG+AGG - chr7.2:7124937-7124956 None:intergenic 20.0%
!!! AAGTTATTTTGAGAAACTAA+AGG + chr7.2:7125810-7125829 MS.gene23047:CDS 20.0%
!!! CATTTAATTTCAATTTGACT+TGG + chr7.2:7125752-7125771 MS.gene23047:CDS 20.0%
! AAACATACTTCATCTAGTAA+TGG - chr7.2:7125565-7125584 None:intergenic 25.0%
! TTAAACAAGCATATATATGC+TGG - chr7.2:7125131-7125150 None:intergenic 25.0%
! TTATTTCCTTAAGACAAGAA+AGG + chr7.2:7125669-7125688 MS.gene23047:CDS 25.0%
! TTCATTCAAATATCATACCA+TGG - chr7.2:7124632-7124651 None:intergenic 25.0%
! TTGAATTCATAGTTAGATTC+TGG - chr7.2:7125283-7125302 None:intergenic 25.0%
!! AAAATACTCTTTTACACGTA+CGG + chr7.2:7124689-7124708 MS.gene23047:intron 25.0%
!!! ATTACCATTGACTGAAATTT+TGG + chr7.2:7125180-7125199 MS.gene23047:intron 25.0%
!!! GATATGATTTGGTTTTGTTT+AGG + chr7.2:7124734-7124753 MS.gene23047:intron 25.0%
!!! GTGTTTTGAATGATATGATT+TGG + chr7.2:7124723-7124742 MS.gene23047:intron 25.0%
!!! TTATTTTGAGAAACTAAAGG+AGG + chr7.2:7125813-7125832 MS.gene23047:CDS 25.0%
AGAAAAGCTAAAGGATAATG+TGG + chr7.2:7125837-7125856 MS.gene23047:CDS 30.0%
AGAACCAAAATTTCAGTCAA+TGG - chr7.2:7125187-7125206 None:intergenic 30.0%
AGGATGATTTATCTGTCTAA+AGG + chr7.2:7124754-7124773 MS.gene23047:intron 30.0%
ATGATTTATCTGTCTAAAGG+TGG + chr7.2:7124757-7124776 MS.gene23047:CDS 30.0%
ATGGAATAAAGCTTGGAATA+TGG + chr7.2:7124496-7124515 MS.gene23047:CDS 30.0%
CAGCCTTCAAAAAAATTGAT+AGG - chr7.2:7124804-7124823 None:intergenic 30.0%
GTGAAAAATGCTATCATTGT+TGG + chr7.2:7125379-7125398 MS.gene23047:CDS 30.0%
TAAGGATCTTCAAACTTTCT+GGG + chr7.2:7125717-7125736 MS.gene23047:CDS 30.0%
TGATTTATCTGTCTAAAGGT+GGG + chr7.2:7124758-7124777 MS.gene23047:CDS 30.0%
TGGAATAAAGCTTGGAATAT+GGG + chr7.2:7124497-7124516 MS.gene23047:CDS 30.0%
! GGTTCTTAGTATTTTCATAG+AGG + chr7.2:7125201-7125220 MS.gene23047:intron 30.0%
! TTCATCTAGTAATGGAACAA+AGG - chr7.2:7125557-7125576 None:intergenic 30.0%
!! AGATTTTGAAGAGATGGATT+TGG + chr7.2:7125951-7125970 MS.gene23047:CDS 30.0%
!!! CAGCCTATCAATTTTTTTGA+AGG + chr7.2:7124798-7124817 MS.gene23047:CDS 30.0%
AAAGGAGGTAGAAAAGCTAA+AGG + chr7.2:7125828-7125847 MS.gene23047:CDS 35.0%
ACTCTACATGGAATAAAGCT+TGG + chr7.2:7124489-7124508 MS.gene23047:CDS 35.0%
AGAAAAGAAGTCGCAAGTTT+AGG + chr7.2:7125614-7125633 MS.gene23047:CDS 35.0%
AGAAGTTTGAGAACTCTACA+TGG + chr7.2:7124477-7124496 MS.gene23047:CDS 35.0%
CAAACTGCGAATATGTTTGA+GGG + chr7.2:7124826-7124845 MS.gene23047:CDS 35.0%
GAAAAGAAGTCGCAAGTTTA+GGG + chr7.2:7125615-7125634 MS.gene23047:CDS 35.0%
GAGAAACGACTAAATCAAGA+AGG + chr7.2:7125433-7125452 MS.gene23047:CDS 35.0%
GTAAGGATCTTCAAACTTTC+TGG + chr7.2:7125716-7125735 MS.gene23047:CDS 35.0%
TTCACAATAAACCCCTTGTT+AGG - chr7.2:7125364-7125383 None:intergenic 35.0%
! AATGCAAGTCAGTTTTTCTG+GGG + chr7.2:7125301-7125320 MS.gene23047:CDS 35.0%
! CAATGCAAGTCAGTTTTTCT+GGG + chr7.2:7125300-7125319 MS.gene23047:CDS 35.0%
! TCAATGCAAGTCAGTTTTTC+TGG + chr7.2:7125299-7125318 MS.gene23047:CDS 35.0%
!! TATGAATGACTTGGCTTGTA+AGG + chr7.2:7125699-7125718 MS.gene23047:CDS 35.0%
AAGTCGCAAGTTTAGGGAAT+GGG + chr7.2:7125621-7125640 MS.gene23047:CDS 40.0%
AGCAACGTTGCAATCACAAA+AGG + chr7.2:7124898-7124917 MS.gene23047:CDS 40.0%
AGCTTCATGATCCTAACAAG+GGG + chr7.2:7125350-7125369 MS.gene23047:CDS 40.0%
ATGGATTTGGATGCTGAACT+AGG + chr7.2:7125964-7125983 MS.gene23047:CDS 40.0%
CCAAAATGTAAGTGAGCTCA+TGG + chr7.2:7125501-7125520 MS.gene23047:CDS 40.0%
GAATTTCTCTCGCTTGAACA+AGG + chr7.2:7124571-7124590 MS.gene23047:CDS 40.0%
GAGCTTCATGATCCTAACAA+GGG + chr7.2:7125349-7125368 MS.gene23047:CDS 40.0%
GCAAACTGCGAATATGTTTG+AGG + chr7.2:7124825-7124844 MS.gene23047:CDS 40.0%
GTAACTTAACTGCTTCCCTA+AGG + chr7.2:7125455-7125474 MS.gene23047:CDS 40.0%
GTTAGAGCCTAGTGTTCAAT+CGG + chr7.2:7125774-7125793 MS.gene23047:CDS 40.0%
TAATGTGGTAGCTCAAGAGT+TGG + chr7.2:7125852-7125871 MS.gene23047:CDS 40.0%
TGAGCTTCATGATCCTAACA+AGG + chr7.2:7125348-7125367 MS.gene23047:CDS 40.0%
TTTATCTGTCTAAAGGTGGG+AGG + chr7.2:7124761-7124780 MS.gene23047:CDS 40.0%
! CCATGAGCTCACTTACATTT+TGG - chr7.2:7125504-7125523 None:intergenic 40.0%
!! GGCAGTAGATTTTGAAGAGA+TGG + chr7.2:7125945-7125964 MS.gene23047:CDS 40.0%
!! TTCTTCTAGCTTTGGCCTTA+GGG - chr7.2:7125473-7125492 None:intergenic 40.0%
AAGTGAGCTCATGGATTCCA+AGG + chr7.2:7125510-7125529 MS.gene23047:CDS 45.0%
AGTGAGCTCATGGATTCCAA+GGG + chr7.2:7125511-7125530 MS.gene23047:CDS 45.0%
CCTAAAGCCGATTGAACACT+AGG - chr7.2:7125784-7125803 None:intergenic 45.0%
CTAAGGCCAAAGCTAGAAGA+AGG + chr7.2:7125472-7125491 MS.gene23047:CDS 45.0%
CTCAAGAGTTGGAATTGGAG+AGG + chr7.2:7125863-7125882 MS.gene23047:CDS 45.0%
CTCGCACCTTTCTTGTCTTA+AGG - chr7.2:7125678-7125697 None:intergenic 45.0%
CTGCGAATATGTTTGAGGGA+TGG + chr7.2:7124830-7124849 MS.gene23047:CDS 45.0%
GAAGTCGCAAGTTTAGGGAA+TGG + chr7.2:7125620-7125639 MS.gene23047:CDS 45.0%
GCTGGCACTCAATAAGTGAA+GGG - chr7.2:7125594-7125613 None:intergenic 45.0%
GGATCTTCAAACTTTCTGGG+AGG + chr7.2:7125720-7125739 MS.gene23047:CDS 45.0%
GGTAGCTCAAGAGTTGGAAT+TGG + chr7.2:7125858-7125877 MS.gene23047:CDS 45.0%
GGTGCGAGATATGAATGACT+TGG + chr7.2:7125690-7125709 MS.gene23047:CDS 45.0%
TGATGCTGCAAGAGACTTGT+TGG + chr7.2:7125921-7125940 MS.gene23047:CDS 45.0%
TGCTGGCACTCAATAAGTGA+AGG - chr7.2:7125595-7125614 None:intergenic 45.0%
TTCTATGTGTCCCATACCCT+TGG - chr7.2:7125530-7125549 None:intergenic 45.0%
! ACTTGCGACTTCTTTTCTGC+TGG - chr7.2:7125612-7125631 None:intergenic 45.0%
! CCTAGTGTTCAATCGGCTTT+AGG + chr7.2:7125781-7125800 MS.gene23047:CDS 45.0%
! CTCATGGATTCCAAGGGTAT+GGG + chr7.2:7125517-7125536 MS.gene23047:CDS 45.0%
!! CTTCTTCTAGCTTTGGCCTT+AGG - chr7.2:7125474-7125493 None:intergenic 45.0%
!! GCTCACTTACATTTTGGCCT+TGG - chr7.2:7125498-7125517 None:intergenic 45.0%
CCAAAGCTAGAAGAAGGCCA+AGG + chr7.2:7125478-7125497 MS.gene23047:CDS 50.0%
GAATGGGCGTTCACTGCTTT+GGG + chr7.2:7125637-7125656 MS.gene23047:CDS 50.0%
GCTCATGGATTCCAAGGGTA+TGG + chr7.2:7125516-7125535 MS.gene23047:CDS 50.0%
TCTAAAGGTGGGAGGAACAC+AGG + chr7.2:7124769-7124788 MS.gene23047:CDS 50.0%
! TACTCCGAGCCTTTTGTCCT+AGG + chr7.2:7124599-7124618 MS.gene23047:CDS 50.0%
!! CCTTGGCCTTCTTCTAGCTT+TGG - chr7.2:7125481-7125500 None:intergenic 50.0%
!! TGCTGCAAGAGACTTGTTGG+AGG + chr7.2:7125924-7125943 MS.gene23047:CDS 50.0%
CATACCATGGATAGCCGCCT+AGG - chr7.2:7124619-7124638 None:intergenic 55.0%
GGAATGGGCGTTCACTGCTT+TGG + chr7.2:7125636-7125655 MS.gene23047:CDS 55.0%
GGATAGCCGCCTAGGACAAA+AGG - chr7.2:7124611-7124630 None:intergenic 55.0%
TTGTCCTAGGCGGCTATCCA+TGG + chr7.2:7124612-7124631 MS.gene23047:CDS 55.0%
! TCCGAGCCTTTTGTCCTAGG+CGG + chr7.2:7124602-7124621 MS.gene23047:CDS 55.0%
GCCGCCTAGGACAAAAGGCT+CGG - chr7.2:7124606-7124625 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 7124452 7126002 7124452 ID=MS.gene23047
chr7.2 mRNA 7124452 7126002 7124452 ID=MS.gene23047.t1;Parent=MS.gene23047
chr7.2 exon 7124452 7124633 7124452 ID=MS.gene23047.t1.exon1;Parent=MS.gene23047.t1
chr7.2 CDS 7124452 7124633 7124452 ID=cds.MS.gene23047.t1;Parent=MS.gene23047.t1
chr7.2 exon 7124756 7124919 7124756 ID=MS.gene23047.t1.exon2;Parent=MS.gene23047.t1
chr7.2 CDS 7124756 7124919 7124756 ID=cds.MS.gene23047.t1;Parent=MS.gene23047.t1
chr7.2 exon 7125284 7126002 7125284 ID=MS.gene23047.t1.exon3;Parent=MS.gene23047.t1
chr7.2 CDS 7125284 7126002 7125284 ID=cds.MS.gene23047.t1;Parent=MS.gene23047.t1
Gene Sequence

>MS.gene23047

ATGGGTCATCAGCAATCTAGTGTTGAGAAGTTTGAGAACTCTACATGGAATAAAGCTTGGAATATGGGTCATCAACAATCTAGTGTTGAAAAGTTTGAGAAATTTACATGGAACGTTGAGAATTTCTCTCGCTTGAACAAGGAATTTTACTCCGAGCCTTTTGTCCTAGGCGGCTATCCATGGTATGATATTTGAATGAATGCATTTCCACATGTTACAATTTATTAGATCGGATACAAAATACTCTTTTACACGTACGGTTTACGTTTTTGTGTTTTGAATGATATGATTTGGTTTTGTTTAGGATGATTTATCTGTCTAAAGGTGGGAGGAACACAGGAGACGACAGCCTATCAATTTTTTTGAAGGCTGTGCAAACTGCGAATATGTTTGAGGGATGGAACAGAGACGTGAAACTTAAGTTGCTTGTATTTAATCAGTTCAAGAGCAACGTTGCAATCACAAAAGGTTTCAATTTTCTTCCTCTCTACAAACAATTATTTAATATTTAAATATGTCAATAATATTATGACTTTAAGATATCATAGTAAACAATGTACTAGTATATTTTTTTTATCAAAGCAACCAGTTAGTATAATAATGAAATTTCCTTATAATAATGAAATTAAAGATAAAAAAATATTATTATAGTTATGTTACTTGAATTGAGCAATAGCCAGCATATATATGCTTGTTTAAAGATTTATTCTCTCGTTATCTGTTTAGATATTACCATTGACTGAAATTTTGGTTCTTAGTATTTTCATAGAGGTGTTGCTTTCATTCTTCTCTTAACACAACTAAACTCACTCTTGATACATCAATTTGCCAGAATCTAACTATGAATTCAATGCAAGTCAGTTTTTCTGGGGTTTCGAATCTTTCACGAGTTTAGCTGAGCTTCATGATCCTAACAAGGGGTTTATTGTGAAAAATGCTATCATTGTTGGTGTAGAAGTGTATGTTTCTAAGTCAAGAAATGAGAAACGACTAAATCAAGAAGGTAACTTAACTGCTTCCCTAAGGCCAAAGCTAGAAGAAGGCCAAGGCCAAAATGTAAGTGAGCTCATGGATTCCAAGGGTATGGGACACATAGAAAAAGCCTTTGTTCCATTACTAGATGAAGTATGTTTTCTGCACCCTTCACTTATTGAGTGCCAGCAGAAAAGAAGTCGCAAGTTTAGGGAATGGGCGTTCACTGCTTTGGGCAGAGTTCTTTATTTCCTTAAGACAAGAAAGGTGCGAGATATGAATGACTTGGCTTGTAAGGATCTTCAAACTTTCTGGGAGGAACTTCATCCATTTAATTTCAATTTGACTTGGTTAGAGCCTAGTGTTCAATCGGCTTTAGGAAAGAAAAGTTATTTTGAGAAACTAAAGGAGGTAGAAAAGCTAAAGGATAATGTGGTAGCTCAAGAGTTGGAATTGGAGAGGCTTAAGTCAAAGATTTCTACTGTAGAGATAAATCTTGATGCTGCAAGAGACTTGTTGGAGGCAGTAGATTTTGAAGAGATGGATTTGGATGCTGAACTAGGATTTTTGAAACCATAA
Protein sequence

>MS.gene23047.t1

MGHQQSSVEKFENSTWNKAWNMGHQQSSVEKFEKFTWNVENFSRLNKEFYSEPFVLGGYPWMIYLSKGGRNTGDDSLSIFLKAVQTANMFEGWNRDVKLKLLVFNQFKSNVAITKESNYEFNASQFFWGFESFTSLAELHDPNKGFIVKNAIIVGVEVYVSKSRNEKRLNQEGNLTASLRPKLEEGQGQNVSELMDSKGMGHIEKAFVPLLDEVCFLHPSLIECQQKRSRKFREWAFTALGRVLYFLKTRKVRDMNDLACKDLQTFWEELHPFNFNLTWLEPSVQSALGKKSYFEKLKEVEKLKDNVVAQELELERLKSKISTVEINLDAARDLLEAVDFEEMDLDAELGFLKP