Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23906.t1 | XP_013457257.1 | 98.3 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 6.20E-119 | 436.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23906.t1 | Q8S1Z1 | 69.0 | 229 | 71 | 0 | 1 | 229 | 1 | 229 | 7.2e-84 | 311.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23906.t1 | B7FKL3 | 98.3 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 4.5e-119 | 436.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene23906 | 0.815535 | 8.80E-52 | -1.69E-46 |
| MS.gene050303 | MS.gene23906 | 0.801623 | 8.25E-49 | -1.69E-46 |
| MS.gene05188 | MS.gene23906 | 0.826883 | 2.12E-54 | -1.69E-46 |
| MS.gene055808 | MS.gene23906 | 0.814022 | 1.90E-51 | -1.69E-46 |
| MS.gene056091 | MS.gene23906 | 0.809845 | 1.55E-50 | -1.69E-46 |
| MS.gene056403 | MS.gene23906 | 0.839393 | 1.63E-57 | -1.69E-46 |
| MS.gene056605 | MS.gene23906 | 0.845496 | 3.92E-59 | -1.69E-46 |
| MS.gene057094 | MS.gene23906 | 0.821657 | 3.59E-53 | -1.69E-46 |
| MS.gene057140 | MS.gene23906 | 0.804702 | 1.90E-49 | -1.69E-46 |
| MS.gene058084 | MS.gene23906 | 0.823879 | 1.09E-53 | -1.69E-46 |
| MS.gene058911 | MS.gene23906 | 0.807578 | 4.72E-50 | -1.69E-46 |
| MS.gene06001 | MS.gene23906 | 0.82092 | 5.31E-53 | -1.69E-46 |
| MS.gene06011 | MS.gene23906 | 0.813415 | 2.59E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene23906 | 0.804186 | 2.44E-49 | -1.69E-46 |
| MS.gene060586 | MS.gene23906 | 0.841824 | 3.76E-58 | -1.69E-46 |
| MS.gene060830 | MS.gene23906 | 0.833555 | 4.99E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene23906 | MS.gene23314 | PPI |
| MS.gene23906 | MS.gene01229 | PPI |
| MS.gene23906 | MS.gene054186 | PPI |
| MS.gene23906 | MS.gene015586 | PPI |
| MS.gene059422 | MS.gene23906 | PPI |
| MS.gene23906 | MS.gene056257 | PPI |
| MS.gene23906 | MS.gene033253 | PPI |
| MS.gene003693 | MS.gene23906 | PPI |
| MS.gene23906 | MS.gene47800 | PPI |
| MS.gene76511 | MS.gene23906 | PPI |
| MS.gene36329 | MS.gene23906 | PPI |
| MS.gene037324 | MS.gene23906 | PPI |
| MS.gene23906 | MS.gene48368 | PPI |
| MS.gene23906 | MS.gene52173 | PPI |
| MS.gene23906 | MS.gene50744 | PPI |
| MS.gene23906 | MS.gene072782 | PPI |
| MS.gene23906 | MS.gene002256 | PPI |
| MS.gene99744 | MS.gene23906 | PPI |
| MS.gene060830 | MS.gene23906 | PPI |
| MS.gene029242 | MS.gene23906 | PPI |
| MS.gene42236 | MS.gene23906 | PPI |
| MS.gene23906 | MS.gene023799 | PPI |
| MS.gene23906 | MS.gene56868 | PPI |
| MS.gene02213 | MS.gene23906 | PPI |
| MS.gene23906 | MS.gene41916 | PPI |
| MS.gene23906 | MS.gene001986 | PPI |
| MS.gene23906 | MS.gene019309 | PPI |
| MS.gene23906 | MS.gene85127 | PPI |
| MS.gene27648 | MS.gene23906 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23906.t1 | MTR_4g094380 | 98.253 | 229 | 4 | 0 | 1 | 229 | 1 | 229 | 5.64e-167 | 459 |
| MS.gene23906.t1 | MTR_4g094380 | 98.571 | 140 | 2 | 0 | 1 | 140 | 1 | 140 | 3.75e-99 | 285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23906.t1 | AT3G60360 | 61.572 | 229 | 87 | 1 | 1 | 229 | 1 | 228 | 1.05e-102 | 297 |
Find 36 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCTTCAAAGTGAGAAAA+AGG | 0.290672 | 4.4:+20304332 | MS.gene23906:CDS |
| ACGCTCTTTGTGAGCAGGTC+TGG | 0.296864 | 4.4:-20303150 | None:intergenic |
| ATGTGAAAGAAGACACTTTA+CGG | 0.340011 | 4.4:+20303330 | MS.gene23906:CDS |
| ATATTCCTGATAATATTAAA+AGG | 0.347552 | 4.4:+20307596 | MS.gene23906:CDS |
| ATTGATGAAGACACAAGATA+TGG | 0.356282 | 4.4:+20304296 | MS.gene23906:CDS |
| ATGATCAATCAAGTGCAAAT+TGG | 0.364827 | 4.4:-20304475 | None:intergenic |
| CGCTCTTTGTGAGCAGGTCT+GGG | 0.369189 | 4.4:-20303149 | None:intergenic |
| TGTTTCAATCACAGGTACTT+AGG | 0.379172 | 4.4:+20303434 | MS.gene23906:intron |
| GGTCTTCGAGGAAGAAATTC+GGG | 0.397372 | 4.4:+20303261 | MS.gene23906:intron |
| GGCACTGAAGAAGGAGTTGC+AGG | 0.398896 | 4.4:+20308853 | MS.gene23906:CDS |
| AGGTCTTCGAGGAAGAAATT+CGG | 0.408654 | 4.4:+20303260 | MS.gene23906:intron |
| AGAGAAAGTCTACATGGATA+TGG | 0.427839 | 4.4:+20308832 | MS.gene23906:CDS |
| TGTGAAAGAAGACACTTTAC+GGG | 0.432035 | 4.4:+20303331 | MS.gene23906:CDS |
| TGTATACCGGTCTACCGGTT+GGG | 0.433095 | 4.4:-20309010 | None:intergenic |
| GTTTCAATCACAGGTACTTA+GGG | 0.442736 | 4.4:+20303435 | MS.gene23906:intron |
| GATGAAATCGTCAACCCAAC+CGG | 0.458704 | 4.4:+20308996 | MS.gene23906:CDS |
| TGAGGACGCTCTTTGTGAGC+AGG | 0.462799 | 4.4:-20303155 | None:intergenic |
| CATGGATATGGCACTGAAGA+AGG | 0.470703 | 4.4:+20308844 | MS.gene23906:CDS |
| ATGTTTACTTTGCTGACGAC+AGG | 0.476056 | 4.4:+20304514 | MS.gene23906:CDS |
| CCATGTAGACTTTCTCTAGC+TGG | 0.476669 | 4.4:-20308826 | None:intergenic |
| AGTGTCTTCTTTCACATGAA+AGG | 0.479919 | 4.4:-20303324 | None:intergenic |
| CGTCAACCCAACCGGTAGAC+CGG | 0.488357 | 4.4:+20309004 | MS.gene23906:CDS |
| TCAGCACGCCACTTGTATAC+CGG | 0.511012 | 4.4:-20309023 | None:intergenic |
| TTGATGAAGACACAAGATAT+GGG | 0.519917 | 4.4:+20304297 | MS.gene23906:CDS |
| CCATTATTATTAGGTCTTCG+AGG | 0.522940 | 4.4:+20303249 | MS.gene23906:intron |
| CCAGCTAGAGAAAGTCTACA+TGG | 0.523733 | 4.4:+20308826 | MS.gene23906:CDS |
| GAGAAAGAGAGTTACGGTTG+AGG | 0.524326 | 4.4:-20303173 | None:intergenic |
| AAGTAAACATGCTTGTTCGC+TGG | 0.531696 | 4.4:-20304501 | None:intergenic |
| TTGTATACCGGTCTACCGGT+TGG | 0.532048 | 4.4:-20309011 | None:intergenic |
| ATCAGGAATATTGTCAGAAG+TGG | 0.555454 | 4.4:-20307584 | None:intergenic |
| CTTACAAAGAGTTGCAAGCA+AGG | 0.563371 | 4.4:+20308789 | MS.gene23906:CDS |
| GGAATATTGTCAGAAGTGGA+TGG | 0.588001 | 4.4:-20307580 | None:intergenic |
| CCACTTGTATACCGGTCTAC+CGG | 0.609261 | 4.4:-20309015 | None:intergenic |
| TTTGTGAGCAGGTCTGGGAA+CGG | 0.611566 | 4.4:-20303144 | None:intergenic |
| CCGGTAGACCGGTATACAAG+TGG | 0.669014 | 4.4:+20309015 | MS.gene23906:CDS |
| AAAAGCTGCTAATAGAAACG+AGG | 0.712242 | 4.4:+20303459 | MS.gene23906:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAAATAAATTATATAAA+TGG | + | chr4.4:20305301-20305320 | MS.gene23906:intron | 0.0% |
| !!! | ATTTTTTTTTTTTTTTGAAC+AGG | - | chr4.4:20306998-20307017 | None:intergenic | 10.0% |
| !! | AATTAAAAGAAATCATTGTT+CGG | + | chr4.4:20304694-20304713 | MS.gene23906:intron | 15.0% |
| !! | ATATTCCTGATAATATTAAA+AGG | + | chr4.4:20307596-20307615 | MS.gene23906:CDS | 15.0% |
| !! | ATTATACTATTAGATTAGAT+TGG | + | chr4.4:20304600-20304619 | MS.gene23906:intron | 15.0% |
| !! | TATGTATAAATTGTTAATGT+AGG | + | chr4.4:20304400-20304419 | MS.gene23906:intron | 15.0% |
| !! | TGTTAAAAAAAAAGTAATTG+TGG | - | chr4.4:20305344-20305363 | None:intergenic | 15.0% |
| !!! | AATGATTTCTTTTAATTTGT+AGG | - | chr4.4:20304691-20304710 | None:intergenic | 15.0% |
| !!! | ATGATTTCTTTTAATTTGTA+GGG | - | chr4.4:20304690-20304709 | None:intergenic | 15.0% |
| !!! | ATTTTTTCTCCATTATTATT+AGG | + | chr4.4:20303240-20303259 | MS.gene23906:intron | 15.0% |
| !!! | TCTATTATTTTTTTTGTAGT+AGG | + | chr4.4:20306614-20306633 | MS.gene23906:intron | 15.0% |
| !!! | TTTTTTTTTTGTGCTTTAAA+TGG | + | chr4.4:20305905-20305924 | MS.gene23906:intron | 15.0% |
| !! | AAAAATTTCCCAAATCAATA+CGG | + | chr4.4:20305641-20305660 | MS.gene23906:intron | 20.0% |
| !! | AAAATCAGATTATAAGTAAG+GGG | + | chr4.4:20306655-20306674 | MS.gene23906:intron | 20.0% |
| !! | AATGTGATTTAATTCAAAAC+AGG | + | chr4.4:20307211-20307230 | MS.gene23906:intron | 20.0% |
| !! | ACAATAAATGCTTAAGTATT+AGG | + | chr4.4:20307806-20307825 | MS.gene23906:intron | 20.0% |
| !! | ATCATCATCTATAAAAATGT+AGG | + | chr4.4:20307512-20307531 | MS.gene23906:intron | 20.0% |
| !! | ATGTGATTTAATTCAAAACA+GGG | + | chr4.4:20307212-20307231 | MS.gene23906:intron | 20.0% |
| !! | CAAAATATGTAATATACATG+CGG | - | chr4.4:20307292-20307311 | None:intergenic | 20.0% |
| !! | CATGAAAATATGATTCAATA+TGG | - | chr4.4:20308572-20308591 | None:intergenic | 20.0% |
| !! | GAAAATCAGATTATAAGTAA+GGG | + | chr4.4:20306654-20306673 | MS.gene23906:intron | 20.0% |
| !! | TAGTATATTTACGTACTTTA+GGG | + | chr4.4:20303840-20303859 | MS.gene23906:intron | 20.0% |
| !! | TATACATGAATTTGTAAGAT+TGG | - | chr4.4:20305183-20305202 | None:intergenic | 20.0% |
| !! | TCATCATCTATAAAAATGTA+GGG | + | chr4.4:20307513-20307532 | MS.gene23906:intron | 20.0% |
| !! | TGTAAAAATACAACTATAGA+GGG | - | chr4.4:20304657-20304676 | None:intergenic | 20.0% |
| !! | TTAGTATATTTACGTACTTT+AGG | + | chr4.4:20303839-20303858 | MS.gene23906:intron | 20.0% |
| !! | TTGATAGACAAATTAAAACA+GGG | + | chr4.4:20308117-20308136 | MS.gene23906:intron | 20.0% |
| !! | TTGTAAAAATACAACTATAG+AGG | - | chr4.4:20304658-20304677 | None:intergenic | 20.0% |
| !! | TTTGATAGACAAATTAAAAC+AGG | + | chr4.4:20308116-20308135 | MS.gene23906:intron | 20.0% |
| !!! | AAAAAACATTTCTAGAAATC+CGG | - | chr4.4:20308742-20308761 | None:intergenic | 20.0% |
| !!! | AATTTTTTTTTGTCTACACT+AGG | - | chr4.4:20305939-20305958 | None:intergenic | 20.0% |
| !!! | ATTTGGGAAATTTTTAGATT+TGG | - | chr4.4:20305636-20305655 | None:intergenic | 20.0% |
| !!! | CTATTTAGATTTTAGATGTA+AGG | + | chr4.4:20307339-20307358 | MS.gene23906:intron | 20.0% |
| !!! | CTTTACCTTTTAATATTATC+AGG | - | chr4.4:20307604-20307623 | None:intergenic | 20.0% |
| !!! | CTTTTTATAAGTTTTGACAA+AGG | + | chr4.4:20303738-20303757 | MS.gene23906:intron | 20.0% |
| !!! | GAAACTGATTTAATTAAACA+TGG | - | chr4.4:20306224-20306243 | None:intergenic | 20.0% |
| !!! | GACAGATTTTATATAGTTTA+GGG | + | chr4.4:20303811-20303830 | MS.gene23906:intron | 20.0% |
| !!! | GTTTATTGATTAAGTAATTG+TGG | - | chr4.4:20305370-20305389 | None:intergenic | 20.0% |
| !!! | TGACAGATTTTATATAGTTT+AGG | + | chr4.4:20303810-20303829 | MS.gene23906:intron | 20.0% |
| !!! | TTCTTTTCTTATAACAAGTT+TGG | + | chr4.4:20304553-20304572 | MS.gene23906:intron | 20.0% |
| ! | ACTAACTTAAGAACAAACTA+TGG | - | chr4.4:20304784-20304803 | None:intergenic | 25.0% |
| ! | ATAACAAGTAACAAGAATAC+AGG | - | chr4.4:20307448-20307467 | None:intergenic | 25.0% |
| ! | CGAAAATCAGATTATAAGTA+AGG | + | chr4.4:20306653-20306672 | MS.gene23906:intron | 25.0% |
| ! | GTTAATTCAAAAACTGTTGA+TGG | + | chr4.4:20303502-20303521 | MS.gene23906:CDS | 25.0% |
| ! | GTTCTTAATTAGATATGTCA+TGG | - | chr4.4:20306168-20306187 | None:intergenic | 25.0% |
| ! | TAAAACAGGGAAAAATAGAA+TGG | + | chr4.4:20308130-20308149 | MS.gene23906:intron | 25.0% |
| ! | TATATGATCAGAAAAATGGT+AGG | + | chr4.4:20308955-20308974 | MS.gene23906:intron | 25.0% |
| ! | TATCAATGACAATTAAGAAG+TGG | + | chr4.4:20306189-20306208 | MS.gene23906:intron | 25.0% |
| ! | TCATCATCATTAATATGACT+AGG | + | chr4.4:20305697-20305716 | MS.gene23906:intron | 25.0% |
| ! | TCCATATATGATCAGAAAAA+TGG | + | chr4.4:20308951-20308970 | MS.gene23906:intron | 25.0% |
| ! | TCCTTATTCGACTTAAATAT+TGG | - | chr4.4:20308158-20308177 | None:intergenic | 25.0% |
| ! | TCTTATAACAAGTTTGGATT+GGG | + | chr4.4:20304559-20304578 | MS.gene23906:intron | 25.0% |
| ! | TGCATATGTAAAGACTAAAA+CGG | - | chr4.4:20308911-20308930 | None:intergenic | 25.0% |
| ! | TGTTTACGTATATCTTGTTA+TGG | + | chr4.4:20308066-20308085 | MS.gene23906:intron | 25.0% |
| ! | TTCTTATAACAAGTTTGGAT+TGG | + | chr4.4:20304558-20304577 | MS.gene23906:intron | 25.0% |
| !! | AATACAGCAATTTAAAGTGT+AGG | + | chr4.4:20306105-20306124 | MS.gene23906:intron | 25.0% |
| !! | AATCATATTTTCATGCTACT+GGG | + | chr4.4:20308577-20308596 | MS.gene23906:intron | 25.0% |
| !! | ACTAAATAATTCTAGGGATA+TGG | + | chr4.4:20307715-20307734 | MS.gene23906:intron | 25.0% |
| !! | CGCATGTATATTACATATTT+TGG | + | chr4.4:20307290-20307309 | MS.gene23906:intron | 25.0% |
| !! | GTTTTATGATTGTTAGTTGT+TGG | + | chr4.4:20304223-20304242 | MS.gene23906:intron | 25.0% |
| !! | TAACTACTTTCTATCCTTTT+CGG | + | chr4.4:20303549-20303568 | MS.gene23906:intron | 25.0% |
| !! | TATATGATTGTTGTTCTTGA+AGG | + | chr4.4:20306262-20306281 | MS.gene23906:intron | 25.0% |
| !! | TGTTCTGTACAGTAATATTT+TGG | + | chr4.4:20307830-20307849 | MS.gene23906:intron | 25.0% |
| !!! | ACCATTTTTCTGATCATATA+TGG | - | chr4.4:20308955-20308974 | None:intergenic | 25.0% |
| !!! | ATGTTTTTTTTTTCTTGCAC+AGG | + | chr4.4:20308753-20308772 | MS.gene23906:intron | 25.0% |
| !!! | GGATGAGTTTTATTTTAAGA+TGG | + | chr4.4:20303480-20303499 | MS.gene23906:CDS | 25.0% |
| !!! | GTATATATAGTTTTTTCCGA+CGG | - | chr4.4:20304911-20304930 | None:intergenic | 25.0% |
| !!! | TACTCCTTTCTTATTTCTAT+GGG | + | chr4.4:20307116-20307135 | MS.gene23906:intron | 25.0% |
| !!! | TTTTTGTTTGTTTCAATCAC+AGG | + | chr4.4:20303426-20303445 | MS.gene23906:intron | 25.0% |
| !!! | TTTTTTTGTAGTAGGATGAT+GGG | + | chr4.4:20306622-20306641 | MS.gene23906:intron | 25.0% |
| !!! | TTTTTTTTGTAGTAGGATGA+TGG | + | chr4.4:20306621-20306640 | MS.gene23906:intron | 25.0% |
| AAAGAGATATTCACGATTGT+TGG | + | chr4.4:20306398-20306417 | MS.gene23906:intron | 30.0% | |
| AAAGCTTCAAAGTGAGAAAA+AGG | + | chr4.4:20304332-20304351 | MS.gene23906:CDS | 30.0% | |
| AAATCATTGTTCGGATTTGA+TGG | + | chr4.4:20304703-20304722 | MS.gene23906:intron | 30.0% | |
| AACTAGCCACATAAAAATCA+AGG | - | chr4.4:20304206-20304225 | None:intergenic | 30.0% | |
| AAGTAGTTAGTTACATACAC+TGG | - | chr4.4:20303538-20303557 | None:intergenic | 30.0% | |
| AAGTGAAATATTGCAGAGAA+AGG | - | chr4.4:20303377-20303396 | None:intergenic | 30.0% | |
| ACTAGCCACATAAAAATCAA+GGG | - | chr4.4:20304205-20304224 | None:intergenic | 30.0% | |
| AGAAAATAACGTATGTGAAG+AGG | - | chr4.4:20303201-20303220 | None:intergenic | 30.0% | |
| AGATTATAAGTAAGGGGTTT+GGG | + | chr4.4:20306661-20306680 | MS.gene23906:intron | 30.0% | |
| AGTGAAATATTGCAGAGAAA+GGG | - | chr4.4:20303376-20303395 | None:intergenic | 30.0% | |
| ATAAAAATCAAGGGTCTGTT+TGG | - | chr4.4:20304196-20304215 | None:intergenic | 30.0% | |
| ATAAGCTGAATTAGACACAT+AGG | + | chr4.4:20305859-20305878 | MS.gene23906:intron | 30.0% | |
| ATAATCTAAGTCTGCATTGA+AGG | + | chr4.4:20308270-20308289 | MS.gene23906:intron | 30.0% | |
| ATGATCAATCAAGTGCAAAT+TGG | - | chr4.4:20304478-20304497 | None:intergenic | 30.0% | |
| ATGGAAAAACTTTATCGACA+CGG | - | chr4.4:20307968-20307987 | None:intergenic | 30.0% | |
| ATGTGAAAGAAGACACTTTA+CGG | + | chr4.4:20303330-20303349 | MS.gene23906:CDS | 30.0% | |
| ATTGATGAAGACACAAGATA+TGG | + | chr4.4:20304296-20304315 | MS.gene23906:CDS | 30.0% | |
| CAAGATGAAAAAAGAACGAA+TGG | - | chr4.4:20308704-20308723 | None:intergenic | 30.0% | |
| CAATAGATAAGCTTCAAACA+TGG | + | chr4.4:20303780-20303799 | MS.gene23906:intron | 30.0% | |
| CATAGAAATAAGAAAGGAGT+AGG | - | chr4.4:20307117-20307136 | None:intergenic | 30.0% | |
| CATGAATTTGTAAGATTGGT+AGG | - | chr4.4:20305179-20305198 | None:intergenic | 30.0% | |
| CTTATTAAATGTTCATGAGC+TGG | - | chr4.4:20303716-20303735 | None:intergenic | 30.0% | |
| GAAAATCAGCTATTCATATG+AGG | - | chr4.4:20305828-20305847 | None:intergenic | 30.0% | |
| GAAATGATGCAATAAAGACA+AGG | - | chr4.4:20306471-20306490 | None:intergenic | 30.0% | |
| GACAATTTCATCAAGAAAGT+AGG | + | chr4.4:20308247-20308266 | MS.gene23906:intron | 30.0% | |
| GAGAAGAAAAGAATATGCTT+TGG | + | chr4.4:20306880-20306899 | MS.gene23906:intron | 30.0% | |
| GATGATAAAAAAGTTGACTG+AGG | - | chr4.4:20307498-20307517 | None:intergenic | 30.0% | |
| GCATATGTAAAGACTAAAAC+GGG | - | chr4.4:20308910-20308929 | None:intergenic | 30.0% | |
| GCCAATATTTAAGTCGAATA+AGG | + | chr4.4:20308154-20308173 | MS.gene23906:intron | 30.0% | |
| GTCGGTACTAAATAATTCTA+GGG | + | chr4.4:20307709-20307728 | MS.gene23906:intron | 30.0% | |
| TATAAGAATAGGTATGGGTA+AGG | + | chr4.4:20306040-20306059 | MS.gene23906:intron | 30.0% | |
| TATGTGTCTAATTCAGCTTA+TGG | - | chr4.4:20305860-20305879 | None:intergenic | 30.0% | |
| TCTATAAAAATGTAGGGAAG+AGG | + | chr4.4:20307519-20307538 | MS.gene23906:intron | 30.0% | |
| TCTTAAGGTCAAATAAGAAG+TGG | - | chr4.4:20306537-20306556 | None:intergenic | 30.0% | |
| TGTCGGTACTAAATAATTCT+AGG | + | chr4.4:20307708-20307727 | MS.gene23906:intron | 30.0% | |
| TTAAGTTAGTTAACTCGATC+AGG | + | chr4.4:20304794-20304813 | MS.gene23906:intron | 30.0% | |
| TTACCCATACCTATTCTTAT+AGG | - | chr4.4:20306041-20306060 | None:intergenic | 30.0% | |
| TTCTTGATGAAATTGTCTAC+TGG | - | chr4.4:20308244-20308263 | None:intergenic | 30.0% | |
| TTGAGTTACTTGTGAACTTA+CGG | - | chr4.4:20305578-20305597 | None:intergenic | 30.0% | |
| TTGATGAAGACACAAGATAT+GGG | + | chr4.4:20304297-20304316 | MS.gene23906:CDS | 30.0% | |
| TTGTAGGATCAAATAAACAG+CGG | + | chr4.4:20307167-20307186 | MS.gene23906:intron | 30.0% | |
| ! | AGGTTAATTCTGAAGACAAA+TGG | - | chr4.4:20305805-20305824 | None:intergenic | 30.0% |
| ! | ATTTGTTTGGCTCATATCTT+TGG | + | chr4.4:20307933-20307952 | MS.gene23906:intron | 30.0% |
| ! | CATATTCTTTTCTTCTCTCA+CGG | - | chr4.4:20306877-20306896 | None:intergenic | 30.0% |
| ! | CATGTTTGAAGCTTATCTAT+TGG | - | chr4.4:20303782-20303801 | None:intergenic | 30.0% |
| ! | GAATCATATTTTCATGCTAC+TGG | + | chr4.4:20308576-20308595 | MS.gene23906:intron | 30.0% |
| ! | GTTTTTCTTTTGTAGGAATG+AGG | + | chr4.4:20304245-20304264 | MS.gene23906:intron | 30.0% |
| ! | TAATGATGATGACATTGATG+AGG | - | chr4.4:20305689-20305708 | None:intergenic | 30.0% |
| ! | TCGCTTTCTGAAAATTTGTT+TGG | + | chr4.4:20307920-20307939 | MS.gene23906:intron | 30.0% |
| ! | TGACTACTTTCTATCCTTTT+CGG | + | chr4.4:20303943-20303962 | MS.gene23906:intron | 30.0% |
| ! | TTAAGGTGTTTATCCAAACA+TGG | - | chr4.4:20303969-20303988 | None:intergenic | 30.0% |
| ! | TTTTTGAACAGGATTGATGT+TGG | - | chr4.4:20306987-20307006 | None:intergenic | 30.0% |
| !! | AGTCAGGTTTTATCGAATAT+GGG | - | chr4.4:20307041-20307060 | None:intergenic | 30.0% |
| !! | ATGAACTTAGTCTTTCGTTT+TGG | - | chr4.4:20305553-20305572 | None:intergenic | 30.0% |
| !! | CTACTCCTTTCTTATTTCTA+TGG | + | chr4.4:20307115-20307134 | MS.gene23906:intron | 30.0% |
| !!! | AGTTGCAGGTATTGATATTT+TGG | + | chr4.4:20308867-20308886 | MS.gene23906:intron | 30.0% |
| !!! | CAGGCTTCTAAATTTTTTGT+CGG | + | chr4.4:20307691-20307710 | MS.gene23906:intron | 30.0% |
| !!! | CATTCGTTCTTTTTTCATCT+TGG | + | chr4.4:20308702-20308721 | MS.gene23906:intron | 30.0% |
| !!! | GCTATTAGTTTTCTGCTTTT+TGG | + | chr4.4:20308546-20308565 | MS.gene23906:intron | 30.0% |
| !!! | GTTGTTGGTTTTTCTTTTGT+AGG | + | chr4.4:20304238-20304257 | MS.gene23906:intron | 30.0% |
| !!! | TTTTTTGTAGTAGGATGATG+GGG | + | chr4.4:20306623-20306642 | MS.gene23906:intron | 30.0% |
| AAAAGCTGCTAATAGAAACG+AGG | + | chr4.4:20303459-20303478 | MS.gene23906:CDS | 35.0% | |
| AAAAGGTAAAGCCCTACATT+TGG | + | chr4.4:20307613-20307632 | MS.gene23906:intron | 35.0% | |
| AAGTAACAAGAATACAGGAG+AGG | - | chr4.4:20307443-20307462 | None:intergenic | 35.0% | |
| AAGTTTGACGTGAAGTTCAT+CGG | - | chr4.4:20305974-20305993 | None:intergenic | 35.0% | |
| AATAGAACAGAGGATGAACT+CGG | + | chr4.4:20306721-20306740 | MS.gene23906:intron | 35.0% | |
| AATCAGCTATTCATATGAGG+AGG | - | chr4.4:20305825-20305844 | None:intergenic | 35.0% | |
| AATGTTGGCGGTCATAATTA+GGG | + | chr4.4:20308466-20308485 | MS.gene23906:intron | 35.0% | |
| ACGCCTATAAGAATAGGTAT+GGG | + | chr4.4:20306035-20306054 | MS.gene23906:intron | 35.0% | |
| AGAGAAAGTCTACATGGATA+TGG | + | chr4.4:20308832-20308851 | MS.gene23906:CDS | 35.0% | |
| AGAGCAAACCATTGCAATTA+TGG | + | chr4.4:20306006-20306025 | MS.gene23906:intron | 35.0% | |
| AGTAACAAGAATACAGGAGA+GGG | - | chr4.4:20307442-20307461 | None:intergenic | 35.0% | |
| AGTCTTCAAAGCCAAATGTA+GGG | - | chr4.4:20307627-20307646 | None:intergenic | 35.0% | |
| AGTGTCTTCTTTCACATGAA+AGG | - | chr4.4:20303327-20303346 | None:intergenic | 35.0% | |
| ATACAACTATAGAGGGACAA+AGG | - | chr4.4:20304650-20304669 | None:intergenic | 35.0% | |
| ATAGGGTGTGATTACTATTG+AGG | - | chr4.4:20307995-20308014 | None:intergenic | 35.0% | |
| ATCAGGAATATTGTCAGAAG+TGG | - | chr4.4:20307587-20307606 | None:intergenic | 35.0% | |
| ATGCTGTAAGCTGCAAATTA+AGG | - | chr4.4:20303986-20304005 | None:intergenic | 35.0% | |
| ATTAGGGAGATTGAATGTTG+TGG | + | chr4.4:20308432-20308451 | MS.gene23906:intron | 35.0% | |
| ATTTGCACGCCTATAAGAAT+AGG | + | chr4.4:20306029-20306048 | MS.gene23906:intron | 35.0% | |
| CAATCGTGAATATCTCTTTG+TGG | - | chr4.4:20306397-20306416 | None:intergenic | 35.0% | |
| CAGATTATAAGTAAGGGGTT+TGG | + | chr4.4:20306660-20306679 | MS.gene23906:intron | 35.0% | |
| CCATTATTATTAGGTCTTCG+AGG | + | chr4.4:20303249-20303268 | MS.gene23906:intron | 35.0% | |
| CCTCGAAGACCTAATAATAA+TGG | - | chr4.4:20303252-20303271 | None:intergenic | 35.0% | |
| CGGAGATGAAAAAATTGCAA+TGG | - | chr4.4:20307861-20307880 | None:intergenic | 35.0% | |
| CTGTTCTATTCCTCTGTAAA+TGG | - | chr4.4:20306711-20306730 | None:intergenic | 35.0% | |
| GAAGTGTAGGCAATAGTTTA+GGG | + | chr4.4:20303871-20303890 | MS.gene23906:intron | 35.0% | |
| GAATGTTCATATCTGAGCAA+TGG | + | chr4.4:20306588-20306607 | MS.gene23906:intron | 35.0% | |
| GATGCCCATAGAAATAAGAA+AGG | - | chr4.4:20307123-20307142 | None:intergenic | 35.0% | |
| GATTATAAGTAAGGGGTTTG+GGG | + | chr4.4:20306662-20306681 | MS.gene23906:intron | 35.0% | |
| GTGCAAATCCATAATTGCAA+TGG | - | chr4.4:20306017-20306036 | None:intergenic | 35.0% | |
| GTTTCAATCACAGGTACTTA+GGG | + | chr4.4:20303435-20303454 | MS.gene23906:intron | 35.0% | |
| TAGGGACTAAATTGAAGTGT+AGG | + | chr4.4:20303858-20303877 | MS.gene23906:intron | 35.0% | |
| TCAAACCTTGTGTTTGGATA+GGG | - | chr4.4:20308012-20308031 | None:intergenic | 35.0% | |
| TCTCAAAATCTCCCAACATT+GGG | - | chr4.4:20306361-20306380 | None:intergenic | 35.0% | |
| TGAAGTGTAGGCAATAGTTT+AGG | + | chr4.4:20303870-20303889 | MS.gene23906:intron | 35.0% | |
| TGATTACTATTGAGGCTTCA+TGG | - | chr4.4:20307987-20308006 | None:intergenic | 35.0% | |
| TGGTCTACTTAAATCTTCGT+GGG | + | chr4.4:20304620-20304639 | MS.gene23906:intron | 35.0% | |
| TGTGAAAGAAGACACTTTAC+GGG | + | chr4.4:20303331-20303350 | MS.gene23906:CDS | 35.0% | |
| TGTTTCAATCACAGGTACTT+AGG | + | chr4.4:20303434-20303453 | MS.gene23906:intron | 35.0% | |
| TTCTCAAAATCTCCCAACAT+TGG | - | chr4.4:20306362-20306381 | None:intergenic | 35.0% | |
| TTGCATCATTTCACTAAAGC+CGG | + | chr4.4:20306479-20306498 | MS.gene23906:intron | 35.0% | |
| TTGGTCTACTTAAATCTTCG+TGG | + | chr4.4:20304619-20304638 | MS.gene23906:intron | 35.0% | |
| TTTACAGAGGAATAGAACAG+AGG | + | chr4.4:20306711-20306730 | MS.gene23906:intron | 35.0% | |
| TTTCATAAGCTATCTTGGTG+AGG | + | chr4.4:20304057-20304076 | MS.gene23906:intron | 35.0% | |
| ! | ACAGACCCTTGATTTTTATG+TGG | + | chr4.4:20304197-20304216 | MS.gene23906:intron | 35.0% |
| ! | ACTAAAACGGGCTCATAATA+AGG | - | chr4.4:20308898-20308917 | None:intergenic | 35.0% |
| ! | AGCTGTTTCATAAGCTATCT+TGG | + | chr4.4:20304052-20304071 | MS.gene23906:intron | 35.0% |
| ! | GATGTTTTCTGTGATTACAC+AGG | + | chr4.4:20307672-20307691 | MS.gene23906:intron | 35.0% |
| ! | GATTGATGTTGGTCAGATTT+TGG | - | chr4.4:20306976-20306995 | None:intergenic | 35.0% |
| ! | TAGCTTTTCAACTTTCTGCA+AGG | - | chr4.4:20304451-20304470 | None:intergenic | 35.0% |
| !! | ATTGTAATGGACACACCAAA+GGG | - | chr4.4:20307885-20307904 | None:intergenic | 35.0% |
| !! | CAGTCAGGTTTTATCGAATA+TGG | - | chr4.4:20307042-20307061 | None:intergenic | 35.0% |
| !! | GTGAATGACCGTATTGATTT+GGG | - | chr4.4:20305652-20305671 | None:intergenic | 35.0% |
| !! | TGAAGGAGATTGCTTGTTAT+TGG | + | chr4.4:20308287-20308306 | MS.gene23906:intron | 35.0% |
| !! | TGTGAATGACCGTATTGATT+TGG | - | chr4.4:20305653-20305672 | None:intergenic | 35.0% |
| !! | TGTTGGTCAGATTTTGGAAA+AGG | - | chr4.4:20306970-20306989 | None:intergenic | 35.0% |
| !!! | ATATAGTTTTTTCCGACGGT+AGG | - | chr4.4:20304907-20304926 | None:intergenic | 35.0% |
| !!! | CTTGGTGAGGTTTTGAATTA+AGG | + | chr4.4:20304070-20304089 | MS.gene23906:intron | 35.0% |
| !!! | GCATTTTTCATTGACTCCTT+GGG | + | chr4.4:20308088-20308107 | MS.gene23906:intron | 35.0% |
| !!! | GCTATTTTTGCAAGCTATCT+CGG | + | chr4.4:20303666-20303685 | MS.gene23906:intron | 35.0% |
| AAACACAAGGTTTGAGGATG+TGG | + | chr4.4:20308017-20308036 | MS.gene23906:intron | 40.0% | |
| AAGATGCTTGATCGACAGTA+AGG | + | chr4.4:20306553-20306572 | MS.gene23906:intron | 40.0% | |
| AAGTAAACATGCTTGTTCGC+TGG | - | chr4.4:20304504-20304523 | None:intergenic | 40.0% | |
| ACAAAATCGAGATCCTATGC+AGG | + | chr4.4:20305097-20305116 | MS.gene23906:intron | 40.0% | |
| ACAATGACTTTGCCCAATGA+AGG | - | chr4.4:20307367-20307386 | None:intergenic | 40.0% | |
| ACATCCTCAAACCTTGTGTT+TGG | - | chr4.4:20308018-20308037 | None:intergenic | 40.0% | |
| ACTGATGCTAACCATCAACT+TGG | - | chr4.4:20303898-20303917 | None:intergenic | 40.0% | |
| ACTGTCGATCAAGCATCTTA+AGG | - | chr4.4:20306552-20306571 | None:intergenic | 40.0% | |
| AGATGCTTGATCGACAGTAA+GGG | + | chr4.4:20306554-20306573 | MS.gene23906:intron | 40.0% | |
| AGATGGATCAGGTTTCATAC+TGG | + | chr4.4:20308375-20308394 | MS.gene23906:intron | 40.0% | |
| AGATGTAAGGTCCCTTCATT+GGG | + | chr4.4:20307352-20307371 | MS.gene23906:intron | 40.0% | |
| AGGATAGAAAGTAGTCACAC+TGG | - | chr4.4:20303940-20303959 | None:intergenic | 40.0% | |
| AGGATCAAATAAACAGCGGT+TGG | + | chr4.4:20307171-20307190 | MS.gene23906:intron | 40.0% | |
| AGGGTTACAAGATCGTGAAT+CGG | + | chr4.4:20305128-20305147 | MS.gene23906:intron | 40.0% | |
| AGGTCTTCGAGGAAGAAATT+CGG | + | chr4.4:20303260-20303279 | MS.gene23906:intron | 40.0% | |
| ATAGGTATGGGTAAGGTAAC+TGG | + | chr4.4:20306047-20306066 | MS.gene23906:intron | 40.0% | |
| ATCAGGTTTCATACTGGTGA+GGG | + | chr4.4:20308381-20308400 | MS.gene23906:intron | 40.0% | |
| ATGAAGACATCTTACACCAC+TGG | - | chr4.4:20305751-20305770 | None:intergenic | 40.0% | |
| ATGGGTAAGGTAACTGGTAT+GGG | + | chr4.4:20306053-20306072 | MS.gene23906:intron | 40.0% | |
| ATGTTTACTTTGCTGACGAC+AGG | + | chr4.4:20304514-20304533 | MS.gene23906:CDS | 40.0% | |
| CAAATGGCTTGAGAATGTGA+AGG | - | chr4.4:20305789-20305808 | None:intergenic | 40.0% | |
| CAATGACTTTGCCCAATGAA+GGG | - | chr4.4:20307366-20307385 | None:intergenic | 40.0% | |
| CACGCCTATAAGAATAGGTA+TGG | + | chr4.4:20306034-20306053 | MS.gene23906:intron | 40.0% | |
| CATTGTTCGGATTTGATGGA+TGG | + | chr4.4:20304707-20304726 | MS.gene23906:intron | 40.0% | |
| CCATTGCTGACAATATAACG+AGG | + | chr4.4:20306830-20306849 | MS.gene23906:intron | 40.0% | |
| CCTCGTTATATTGTCAGCAA+TGG | - | chr4.4:20306833-20306852 | None:intergenic | 40.0% | |
| CTATCCAAACACAAGGTTTG+AGG | + | chr4.4:20308011-20308030 | MS.gene23906:intron | 40.0% | |
| CTCAAACCTTGTGTTTGGAT+AGG | - | chr4.4:20308013-20308032 | None:intergenic | 40.0% | |
| CTTACAAAGAGTTGCAAGCA+AGG | + | chr4.4:20308789-20308808 | MS.gene23906:CDS | 40.0% | |
| GAATGTTGGCGGTCATAATT+AGG | + | chr4.4:20308465-20308484 | MS.gene23906:intron | 40.0% | |
| GACTGTAACCAACTTGTGAT+CGG | + | chr4.4:20307057-20307076 | MS.gene23906:intron | 40.0% | |
| GAGGAAGAGAAAGAGAGTTA+CGG | - | chr4.4:20303182-20303201 | None:intergenic | 40.0% | |
| GAGTCAGCCAATCATTGTAA+TGG | - | chr4.4:20307898-20307917 | None:intergenic | 40.0% | |
| GAGTCTTCAAAGCCAAATGT+AGG | - | chr4.4:20307628-20307647 | None:intergenic | 40.0% | |
| GATGAACTTCACGTCAAACT+TGG | + | chr4.4:20305973-20305992 | MS.gene23906:intron | 40.0% | |
| GCAGTTGCTACATACAATAC+AGG | - | chr4.4:20308643-20308662 | None:intergenic | 40.0% | |
| GGAAAATACTATCCACTGCT+TGG | + | chr4.4:20306683-20306702 | MS.gene23906:intron | 40.0% | |
| GGAATATTGTCAGAAGTGGA+TGG | - | chr4.4:20307583-20307602 | None:intergenic | 40.0% | |
| GGATCAAATAAACAGCGGTT+GGG | + | chr4.4:20307172-20307191 | MS.gene23906:intron | 40.0% | |
| GGTGTGTCCATTACAATGAT+TGG | + | chr4.4:20307888-20307907 | MS.gene23906:intron | 40.0% | |
| GTAACAAGAATACAGGAGAG+GGG | - | chr4.4:20307441-20307460 | None:intergenic | 40.0% | |
| GTGAATATCTCTTTGTGGAG+AGG | - | chr4.4:20306392-20306411 | None:intergenic | 40.0% | |
| TAAGAAAGGAGTAGGATCAC+TGG | - | chr4.4:20307109-20307128 | None:intergenic | 40.0% | |
| TAAGGTAACTGGTACGATAG+TGG | + | chr4.4:20306076-20306095 | MS.gene23906:intron | 40.0% | |
| TAAGGTAACTGGTATGGGTA+AGG | + | chr4.4:20306058-20306077 | MS.gene23906:intron | 40.0% | |
| TACATGCGGAATCGTATACA+TGG | - | chr4.4:20307278-20307297 | None:intergenic | 40.0% | |
| TAGATGTAAGGTCCCTTCAT+TGG | + | chr4.4:20307351-20307370 | MS.gene23906:intron | 40.0% | |
| TATGATCATTCAACCCCTCT+CGG | - | chr4.4:20304880-20304899 | None:intergenic | 40.0% | |
| TATGGGTAAGGTAACTGGTA+TGG | + | chr4.4:20306052-20306071 | MS.gene23906:intron | 40.0% | |
| TCCAACATCAACCCAATGTT+GGG | + | chr4.4:20306347-20306366 | MS.gene23906:intron | 40.0% | |
| TCGGCAAGCTTGTGAAAATA+AGG | + | chr4.4:20303685-20303704 | MS.gene23906:intron | 40.0% | |
| TGATCATAACATCCTACCGT+CGG | + | chr4.4:20304892-20304911 | MS.gene23906:intron | 40.0% | |
| TGATGACATTGATGAGGATG+AGG | - | chr4.4:20305683-20305702 | None:intergenic | 40.0% | |
| TGTCTATCAAATGCTACCCA+AGG | - | chr4.4:20308107-20308126 | None:intergenic | 40.0% | |
| TTATCAAGACCTTGCCGAAA+AGG | - | chr4.4:20303566-20303585 | None:intergenic | 40.0% | |
| TTATCCAAACATGGCCGAAA+AGG | - | chr4.4:20303960-20303979 | None:intergenic | 40.0% | |
| TTCTCACAAAGCTGTAACCA+AGG | + | chr4.4:20305071-20305090 | MS.gene23906:intron | 40.0% | |
| ! | ACATTTCTAGAAATCCGGCA+TGG | - | chr4.4:20308737-20308756 | None:intergenic | 40.0% |
| ! | ACTTTCTATCCTTTTCGGCA+AGG | + | chr4.4:20303554-20303573 | MS.gene23906:intron | 40.0% |
| ! | AGGCTATTGATGCTGATTGA+TGG | + | chr4.4:20304814-20304833 | MS.gene23906:intron | 40.0% |
| ! | GATCTCGATTTTGTCTACCT+TGG | - | chr4.4:20305091-20305110 | None:intergenic | 40.0% |
| ! | GGCTATTGATGCTGATTGAT+GGG | + | chr4.4:20304815-20304834 | MS.gene23906:intron | 40.0% |
| ! | TAGTTTAGGGACCAAGTTGA+TGG | + | chr4.4:20303884-20303903 | MS.gene23906:intron | 40.0% |
| !! | AATTGCAATGGTTTGCTCTG+TGG | - | chr4.4:20306005-20306024 | None:intergenic | 40.0% |
| !! | ATCACAAGTTGGTTACAGTC+AGG | - | chr4.4:20307057-20307076 | None:intergenic | 40.0% |
| !! | ATTGCAATGGTTTGCTCTGT+GGG | - | chr4.4:20306004-20306023 | None:intergenic | 40.0% |
| !! | CATAGAGGTACTTGGATTGT+AGG | + | chr4.4:20307151-20307170 | MS.gene23906:intron | 40.0% |
| !! | CATTGTAATGGACACACCAA+AGG | - | chr4.4:20307886-20307905 | None:intergenic | 40.0% |
| !! | GATTGCTTGTTATTGGTGAC+TGG | + | chr4.4:20308294-20308313 | MS.gene23906:intron | 40.0% |
| !! | GGTTTTATCGAATATGGGAC+AGG | - | chr4.4:20307036-20307055 | None:intergenic | 40.0% |
| !!! | GGCATTTTTCATTGACTCCT+TGG | + | chr4.4:20308087-20308106 | MS.gene23906:intron | 40.0% |
| !!! | TTTTTTCATCTCCGACCCTT+TGG | + | chr4.4:20307867-20307886 | MS.gene23906:intron | 40.0% |
| ACTCAGTCGAGCTTATCTAC+TGG | - | chr4.4:20304169-20304188 | None:intergenic | 45.0% | |
| ACTGGTATGGGTAAGGTAAC+TGG | + | chr4.4:20306065-20306084 | MS.gene23906:intron | 45.0% | |
| AGATTCTACCTATGACCGAG+AGG | + | chr4.4:20304862-20304881 | MS.gene23906:intron | 45.0% | |
| AGCAGGTCTAATCAAGTCTC+CGG | - | chr4.4:20306501-20306520 | None:intergenic | 45.0% | |
| AGGAACAAACAAACCCGTAG+AGG | + | chr4.4:20306792-20306811 | MS.gene23906:intron | 45.0% | |
| ATCATGACATTCCCTCAGGA+AGG | - | chr4.4:20308194-20308213 | None:intergenic | 45.0% | |
| ATCATGCGCGAGAGATGAAA+TGG | + | chr4.4:20306930-20306949 | MS.gene23906:intron | 45.0% | |
| ATCCATCATGACATTCCCTC+AGG | - | chr4.4:20308198-20308217 | None:intergenic | 45.0% | |
| ATCGAGATCCTATGCAGGAT+CGG | + | chr4.4:20305102-20305121 | MS.gene23906:intron | 45.0% | |
| ATTCTACCTATGACCGAGAG+GGG | + | chr4.4:20304864-20304883 | MS.gene23906:intron | 45.0% | |
| CCAGCTAGAGAAAGTCTACA+TGG | + | chr4.4:20308826-20308845 | MS.gene23906:CDS | 45.0% | |
| CCATGTAGACTTTCTCTAGC+TGG | - | chr4.4:20308829-20308848 | None:intergenic | 45.0% | |
| CGCTTACAATCATCTGCTTG+TGG | + | chr4.4:20306300-20306319 | MS.gene23906:intron | 45.0% | |
| CTCCAACATCAACCCAATGT+TGG | + | chr4.4:20306346-20306365 | MS.gene23906:intron | 45.0% | |
| GAGAAAGAGAGTTACGGTTG+AGG | - | chr4.4:20303176-20303195 | None:intergenic | 45.0% | |
| GATCAGGTTTCATACTGGTG+AGG | + | chr4.4:20308380-20308399 | MS.gene23906:intron | 45.0% | |
| GATGAAATCGTCAACCCAAC+CGG | + | chr4.4:20308996-20309015 | MS.gene23906:CDS | 45.0% | |
| GATGCTTGATCGACAGTAAG+GGG | + | chr4.4:20306555-20306574 | MS.gene23906:intron | 45.0% | |
| GATTCTACCTATGACCGAGA+GGG | + | chr4.4:20304863-20304882 | MS.gene23906:intron | 45.0% | |
| GGAACAAACAAACCCGTAGA+GGG | + | chr4.4:20306793-20306812 | MS.gene23906:intron | 45.0% | |
| GGTCTTCGAGGAAGAAATTC+GGG | + | chr4.4:20303261-20303280 | MS.gene23906:intron | 45.0% | |
| GTAGCTAGACAGAATGTTGG+CGG | + | chr4.4:20308454-20308473 | MS.gene23906:intron | 45.0% | |
| GTCTACTGGATCAACTCTGA+TGG | - | chr4.4:20308230-20308249 | None:intergenic | 45.0% | |
| GTGGAAAAACGAGTAGAAGC+AGG | - | chr4.4:20306518-20306537 | None:intergenic | 45.0% | |
| GTGGTAGCTAGACAGAATGT+TGG | + | chr4.4:20308451-20308470 | MS.gene23906:intron | 45.0% | |
| GTTACAAGATCGTGAATCGG+AGG | + | chr4.4:20305131-20305150 | MS.gene23906:intron | 45.0% | |
| GTTTGTTTGTTCCTGGCATG+TGG | - | chr4.4:20306786-20306805 | None:intergenic | 45.0% | |
| TCACACCCTATCCAAACACA+AGG | + | chr4.4:20308004-20308023 | MS.gene23906:intron | 45.0% | |
| TCAGGTTTCATACTGGTGAG+GGG | + | chr4.4:20308382-20308401 | MS.gene23906:intron | 45.0% | |
| TCCATCTACAACCTAAGCTC+TGG | - | chr4.4:20308362-20308381 | None:intergenic | 45.0% | |
| TGAATCGGAGGATCGTAACA+CGG | + | chr4.4:20305143-20305162 | MS.gene23906:intron | 45.0% | |
| TGACATTGATGAGGATGAGG+AGG | - | chr4.4:20305680-20305699 | None:intergenic | 45.0% | |
| TGTGATCACCGATCACAAGT+TGG | - | chr4.4:20307068-20307087 | None:intergenic | 45.0% | |
| TTCCTGAGGGAATGTCATGA+TGG | + | chr4.4:20308193-20308212 | MS.gene23906:intron | 45.0% | |
| ! | AACTCGGTGAACTGAAACAG+TGG | + | chr4.4:20306737-20306756 | MS.gene23906:intron | 45.0% |
| ! | ACCAGAGCTTAGGTTGTAGA+TGG | + | chr4.4:20308358-20308377 | MS.gene23906:intron | 45.0% |
| ! | CATGGATATGGCACTGAAGA+AGG | + | chr4.4:20308844-20308863 | MS.gene23906:CDS | 45.0% |
| ! | CTATCCTTTTCGGCCATGTT+TGG | + | chr4.4:20303953-20303972 | MS.gene23906:intron | 45.0% |
| ! | GCTTAGGTTGTAGATGGATC+AGG | + | chr4.4:20308364-20308383 | MS.gene23906:intron | 45.0% |
| ! | TAATGGACACACCAAAGGGT+CGG | - | chr4.4:20307881-20307900 | None:intergenic | 45.0% |
| ! | TCTACGGGTTTGTTTGTTCC+TGG | - | chr4.4:20306793-20306812 | None:intergenic | 45.0% |
| !! | ACTGCTGTACTAGGTTGGTT+TGG | + | chr4.4:20308406-20308425 | MS.gene23906:intron | 45.0% |
| !! | CAACATTGGGTTGATGTTGG+AGG | - | chr4.4:20306348-20306367 | None:intergenic | 45.0% |
| !! | CTGCTGTACTAGGTTGGTTT+GGG | + | chr4.4:20308407-20308426 | MS.gene23906:intron | 45.0% |
| !! | CTTGTTATTGGTGACTGGCA+AGG | + | chr4.4:20308299-20308318 | MS.gene23906:intron | 45.0% |
| !! | GTAACACGCATAGAGGTACT+TGG | + | chr4.4:20307143-20307162 | MS.gene23906:intron | 45.0% |
| !! | TAGGTTGGTTTGGGGGATTA+GGG | + | chr4.4:20308416-20308435 | MS.gene23906:intron | 45.0% |
| !! | TCCCAACATTGGGTTGATGT+TGG | - | chr4.4:20306351-20306370 | None:intergenic | 45.0% |
| !! | TCGAATAAGGAGTGCCAACA+TGG | + | chr4.4:20308167-20308186 | MS.gene23906:intron | 45.0% |
| !! | TCTTACACCACTGGTGTTGT+TGG | - | chr4.4:20305742-20305761 | None:intergenic | 45.0% |
| !! | TGCTGTACTAGGTTGGTTTG+GGG | + | chr4.4:20308408-20308427 | MS.gene23906:intron | 45.0% |
| !!! | TGGTGTTGTTGGCGACTTTT+TGG | - | chr4.4:20305731-20305750 | None:intergenic | 45.0% |
| AAAGTCGCCAACAACACCAG+TGG | + | chr4.4:20305732-20305751 | MS.gene23906:intron | 50.0% | |
| AAGCAGAAGAACCACATGCC+AGG | + | chr4.4:20306772-20306791 | MS.gene23906:intron | 50.0% | |
| AGAATACAGGAGAGGGGAGA+AGG | - | chr4.4:20307435-20307454 | None:intergenic | 50.0% | |
| ATTCAACCCCTCTCGGTCAT+AGG | - | chr4.4:20304873-20304892 | None:intergenic | 50.0% | |
| CCACTTGTATACCGGTCTAC+CGG | - | chr4.4:20309018-20309037 | None:intergenic | 50.0% | |
| CTGCTTGGAGCCATTTACAG+AGG | + | chr4.4:20306698-20306717 | MS.gene23906:intron | 50.0% | |
| CTGTAAATGGCTCCAAGCAG+TGG | - | chr4.4:20306698-20306717 | None:intergenic | 50.0% | |
| GAATACAGGAGAGGGGAGAA+GGG | - | chr4.4:20307434-20307453 | None:intergenic | 50.0% | |
| TAGAAATCCGGCATGGTGCT+GGG | - | chr4.4:20308730-20308749 | None:intergenic | 50.0% | |
| TCAGCACGCCACTTGTATAC+CGG | - | chr4.4:20309026-20309045 | None:intergenic | 50.0% | |
| TCGAGATCCTATGCAGGATC+GGG | + | chr4.4:20305103-20305122 | MS.gene23906:intron | 50.0% | |
| TGACTGGCAAGGAGGAACAA+GGG | + | chr4.4:20308310-20308329 | MS.gene23906:intron | 50.0% | |
| TTGTATACCGGTCTACCGGT+TGG | - | chr4.4:20309014-20309033 | None:intergenic | 50.0% | |
| TTTGTGAGCAGGTCTGGGAA+CGG | - | chr4.4:20303147-20303166 | None:intergenic | 50.0% | |
| ! | GTTATTGGTGACTGGCAAGG+AGG | + | chr4.4:20308302-20308321 | MS.gene23906:intron | 50.0% |
| ! | TGTATACCGGTCTACCGGTT+GGG | - | chr4.4:20309013-20309032 | None:intergenic | 50.0% |
| !! | ATGTCATGATGGATGCGAGG+AGG | + | chr4.4:20308204-20308223 | MS.gene23906:intron | 50.0% |
| !! | CTAGGTTGGTTTGGGGGATT+AGG | + | chr4.4:20308415-20308434 | MS.gene23906:intron | 50.0% |
| !! | GCTGTACTAGGTTGGTTTGG+GGG | + | chr4.4:20308409-20308428 | MS.gene23906:intron | 50.0% |
| !! | GGAATGTCATGATGGATGCG+AGG | + | chr4.4:20308201-20308220 | MS.gene23906:intron | 50.0% |
| AACAAACCCGTAGAGGGAGC+AGG | + | chr4.4:20306799-20306818 | MS.gene23906:intron | 55.0% | |
| AACACTGCCTGCTCCCTCTA+CGG | - | chr4.4:20306809-20306828 | None:intergenic | 55.0% | |
| ACGCTCTTTGTGAGCAGGTC+TGG | - | chr4.4:20303153-20303172 | None:intergenic | 55.0% | |
| ACTGGCAAGGAGGAACAAGG+GGG | + | chr4.4:20308312-20308331 | MS.gene23906:intron | 55.0% | |
| ATCCTATGCAGGATCGGGGA+AGG | + | chr4.4:20305108-20305127 | MS.gene23906:intron | 55.0% | |
| CCGGTAGACCGGTATACAAG+TGG | + | chr4.4:20309015-20309034 | MS.gene23906:CDS | 55.0% | |
| CGAGATCCTATGCAGGATCG+GGG | + | chr4.4:20305104-20305123 | MS.gene23906:intron | 55.0% | |
| CGCTCTTTGTGAGCAGGTCT+GGG | - | chr4.4:20303152-20303171 | None:intergenic | 55.0% | |
| CTAGAAATCCGGCATGGTGC+TGG | - | chr4.4:20308731-20308750 | None:intergenic | 55.0% | |
| GACTGGCAAGGAGGAACAAG+GGG | + | chr4.4:20308311-20308330 | MS.gene23906:intron | 55.0% | |
| GCAGTGCTTCACCAGAGCTT+AGG | + | chr4.4:20308348-20308367 | MS.gene23906:intron | 55.0% | |
| GCCAACATGGACCTTCCTGA+GGG | + | chr4.4:20308180-20308199 | MS.gene23906:intron | 55.0% | |
| GTGACTGGCAAGGAGGAACA+AGG | + | chr4.4:20308309-20308328 | MS.gene23906:intron | 55.0% | |
| TCCCTCAGGAAGGTCCATGT+TGG | - | chr4.4:20308184-20308203 | None:intergenic | 55.0% | |
| TCCTATGCAGGATCGGGGAA+GGG | + | chr4.4:20305109-20305128 | MS.gene23906:intron | 55.0% | |
| TGAGGACGCTCTTTGTGAGC+AGG | - | chr4.4:20303158-20303177 | None:intergenic | 55.0% | |
| TGCCAACATGGACCTTCCTG+AGG | + | chr4.4:20308179-20308198 | MS.gene23906:intron | 55.0% | |
| ! | GGCACTGAAGAAGGAGTTGC+AGG | + | chr4.4:20308853-20308872 | MS.gene23906:CDS | 55.0% |
| ! | GGGCATCGTAACACGCATAG+AGG | + | chr4.4:20307136-20307155 | MS.gene23906:intron | 55.0% |
| AACAAGGGGGTGGCAGGTCT+TGG | + | chr4.4:20308325-20308344 | MS.gene23906:intron | 60.0% | |
| ACAAGGGGGTGGCAGGTCTT+GGG | + | chr4.4:20308326-20308345 | MS.gene23906:intron | 60.0% | |
| ACACTGCCTGCTCCCTCTAC+GGG | - | chr4.4:20306808-20306827 | None:intergenic | 60.0% | |
| ACCCTTCCCCGATCCTGCAT+AGG | - | chr4.4:20305113-20305132 | None:intergenic | 60.0% | |
| CGTCAACCCAACCGGTAGAC+CGG | + | chr4.4:20309004-20309023 | MS.gene23906:CDS | 60.0% | |
| CTTGGTTCCCAGCACCATGC+CGG | + | chr4.4:20308720-20308739 | MS.gene23906:intron | 60.0% | |
| !! | GGGGCACTGCTGTACTAGGT+TGG | + | chr4.4:20308401-20308420 | MS.gene23906:intron | 60.0% |
| !! | GTGAGGGGCACTGCTGTACT+AGG | + | chr4.4:20308397-20308416 | MS.gene23906:intron | 60.0% |
| AGGAGGAACAAGGGGGTGGC+AGG | + | chr4.4:20308319-20308338 | MS.gene23906:intron | 65.0% | |
| GGCAAGGAGGAACAAGGGGG+TGG | + | chr4.4:20308315-20308334 | MS.gene23906:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 20303125 | 20309058 | 20303125 | ID=MS.gene23906 |
| chr4.4 | mRNA | 20303125 | 20309058 | 20303125 | ID=MS.gene23906.t1;Parent=MS.gene23906 |
| chr4.4 | exon | 20303125 | 20303180 | 20303125 | ID=MS.gene23906.t1.exon1;Parent=MS.gene23906.t1 |
| chr4.4 | CDS | 20303125 | 20303180 | 20303125 | ID=cds.MS.gene23906.t1;Parent=MS.gene23906.t1 |
| chr4.4 | exon | 20303262 | 20303352 | 20303262 | ID=MS.gene23906.t1.exon2;Parent=MS.gene23906.t1 |
| chr4.4 | CDS | 20303262 | 20303352 | 20303262 | ID=cds.MS.gene23906.t1;Parent=MS.gene23906.t1 |
| chr4.4 | exon | 20303448 | 20303539 | 20303448 | ID=MS.gene23906.t1.exon3;Parent=MS.gene23906.t1 |
| chr4.4 | CDS | 20303448 | 20303539 | 20303448 | ID=cds.MS.gene23906.t1;Parent=MS.gene23906.t1 |
| chr4.4 | exon | 20304260 | 20304353 | 20304260 | ID=MS.gene23906.t1.exon4;Parent=MS.gene23906.t1 |
| chr4.4 | CDS | 20304260 | 20304353 | 20304260 | ID=cds.MS.gene23906.t1;Parent=MS.gene23906.t1 |
| chr4.4 | exon | 20304456 | 20304535 | 20304456 | ID=MS.gene23906.t1.exon5;Parent=MS.gene23906.t1 |
| chr4.4 | CDS | 20304456 | 20304535 | 20304456 | ID=cds.MS.gene23906.t1;Parent=MS.gene23906.t1 |
| chr4.4 | exon | 20307534 | 20307617 | 20307534 | ID=MS.gene23906.t1.exon6;Parent=MS.gene23906.t1 |
| chr4.4 | CDS | 20307534 | 20307617 | 20307534 | ID=cds.MS.gene23906.t1;Parent=MS.gene23906.t1 |
| chr4.4 | exon | 20308775 | 20308874 | 20308775 | ID=MS.gene23906.t1.exon7;Parent=MS.gene23906.t1 |
| chr4.4 | CDS | 20308775 | 20308874 | 20308775 | ID=cds.MS.gene23906.t1;Parent=MS.gene23906.t1 |
| chr4.4 | exon | 20308966 | 20309058 | 20308966 | ID=MS.gene23906.t1.exon8;Parent=MS.gene23906.t1 |
| chr4.4 | CDS | 20308966 | 20309058 | 20308966 | ID=cds.MS.gene23906.t1;Parent=MS.gene23906.t1 |
| Gene Sequence |
| Protein sequence |
