Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24226.t1 | XP_003589343.2 | 97 | 367 | 11 | 0 | 1 | 367 | 130 | 496 | 3.70E-198 | 700.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24226.t1 | Q851Q6 | 66.9 | 366 | 115 | 2 | 1 | 360 | 137 | 502 | 1.5e-136 | 487.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24226.t1 | G7I5V4 | 97.0 | 367 | 11 | 0 | 1 | 367 | 130 | 496 | 2.7e-198 | 700.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene24226 | 0.814755 | 1.31E-51 | -1.69E-46 |
| MS.gene050099 | MS.gene24226 | 0.819929 | 8.97E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene24226 | 0.844501 | 7.27E-59 | -1.69E-46 |
| MS.gene050404 | MS.gene24226 | 0.802004 | 6.89E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene24226 | 0.81602 | 6.86E-52 | -1.69E-46 |
| MS.gene050642 | MS.gene24226 | 0.831804 | 1.36E-55 | -1.69E-46 |
| MS.gene050812 | MS.gene24226 | 0.837565 | 4.82E-57 | -1.69E-46 |
| MS.gene051171 | MS.gene24226 | 0.823225 | 1.55E-53 | -1.69E-46 |
| MS.gene051240 | MS.gene24226 | 0.822424 | 2.39E-53 | -1.69E-46 |
| MS.gene051242 | MS.gene24226 | 0.846511 | 2.07E-59 | -1.69E-46 |
| MS.gene051471 | MS.gene24226 | 0.825167 | 5.43E-54 | -1.69E-46 |
| MS.gene051582 | MS.gene24226 | 0.82517 | 5.43E-54 | -1.69E-46 |
| MS.gene051662 | MS.gene24226 | 0.80087 | 1.18E-48 | -1.69E-46 |
| MS.gene051983 | MS.gene24226 | 0.842103 | 3.17E-58 | -1.69E-46 |
| MS.gene052188 | MS.gene24226 | 0.819783 | 9.69E-53 | -1.69E-46 |
| MS.gene052310 | MS.gene24226 | 0.802385 | 5.75E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene24226 | 0.825509 | 4.51E-54 | -1.69E-46 |
| MS.gene052600 | MS.gene24226 | 0.840301 | 9.44E-58 | -1.69E-46 |
| MS.gene053330 | MS.gene24226 | 0.83797 | 3.80E-57 | -1.69E-46 |
| MS.gene053557 | MS.gene24226 | 0.821347 | 4.24E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene24226 | 0.829632 | 4.62E-55 | -1.69E-46 |
| MS.gene053907 | MS.gene24226 | 0.847302 | 1.26E-59 | -1.69E-46 |
| MS.gene053928 | MS.gene24226 | 0.805086 | 1.58E-49 | -1.69E-46 |
| MS.gene053971 | MS.gene24226 | 0.813335 | 2.70E-51 | -1.69E-46 |
| MS.gene054942 | MS.gene24226 | 0.815669 | 8.21E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene24226 | 0.803734 | 3.03E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene24226 | 0.826066 | 3.33E-54 | -1.69E-46 |
| MS.gene055428 | MS.gene24226 | 0.830754 | 2.46E-55 | -1.69E-46 |
| MS.gene05553 | MS.gene24226 | 0.850066 | 2.16E-60 | -1.69E-46 |
| MS.gene055971 | MS.gene24226 | 0.816045 | 6.77E-52 | -1.69E-46 |
| MS.gene056451 | MS.gene24226 | 0.816041 | 6.78E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene24226 | 0.834819 | 2.40E-56 | -1.69E-46 |
| MS.gene056659 | MS.gene24226 | 0.805278 | 1.44E-49 | -1.69E-46 |
| MS.gene056664 | MS.gene24226 | 0.820099 | 8.20E-53 | -1.69E-46 |
| MS.gene056723 | MS.gene24226 | 0.800992 | 1.11E-48 | -1.69E-46 |
| MS.gene056796 | MS.gene24226 | 0.809476 | 1.86E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene24226 | 0.847455 | 1.14E-59 | -1.69E-46 |
| MS.gene05702 | MS.gene24226 | 0.821822 | 3.29E-53 | -1.69E-46 |
| MS.gene057121 | MS.gene24226 | 0.862424 | 5.12E-64 | -1.69E-46 |
| MS.gene058002 | MS.gene24226 | 0.84545 | 4.03E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene24226 | 0.832138 | 1.12E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene24226 | 0.888472 | 5.73E-73 | -1.69E-46 |
| MS.gene058233 | MS.gene24226 | 0.836029 | 1.19E-56 | -1.69E-46 |
| MS.gene058276 | MS.gene24226 | 0.904207 | 1.56E-79 | -1.69E-46 |
| MS.gene058743 | MS.gene24226 | 0.823863 | 1.10E-53 | -1.69E-46 |
| MS.gene058746 | MS.gene24226 | 0.809698 | 1.66E-50 | -1.69E-46 |
| MS.gene058833 | MS.gene24226 | 0.80931 | 2.02E-50 | -1.69E-46 |
| MS.gene05886 | MS.gene24226 | 0.802941 | 4.42E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene24226 | 0.816748 | 4.71E-52 | -1.69E-46 |
| MS.gene059247 | MS.gene24226 | 0.816203 | 6.24E-52 | -1.69E-46 |
| MS.gene05984 | MS.gene24226 | 0.830204 | 3.35E-55 | -1.69E-46 |
| MS.gene059894 | MS.gene24226 | 0.855882 | 4.68E-62 | -1.69E-46 |
| MS.gene060083 | MS.gene24226 | 0.832399 | 9.67E-56 | -1.69E-46 |
| MS.gene060407 | MS.gene24226 | 0.865439 | 5.90E-65 | -1.69E-46 |
| MS.gene06090 | MS.gene24226 | 0.80042 | 1.45E-48 | -1.69E-46 |
| MS.gene061049 | MS.gene24226 | 0.82568 | 4.11E-54 | -1.69E-46 |
| MS.gene061159 | MS.gene24226 | 0.838351 | 3.03E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24226.t1 | MTR_1g023160 | 97.003 | 367 | 11 | 0 | 1 | 367 | 130 | 496 | 0.0 | 718 |
| MS.gene24226.t1 | MTR_2g019790 | 36.491 | 285 | 154 | 5 | 7 | 290 | 203 | 461 | 1.10e-52 | 184 |
| MS.gene24226.t1 | MTR_1g073010 | 40.376 | 213 | 105 | 5 | 73 | 271 | 250 | 454 | 7.56e-39 | 145 |
| MS.gene24226.t1 | MTR_2g030370 | 31.387 | 137 | 75 | 3 | 143 | 260 | 27 | 163 | 9.91e-16 | 78.2 |
| MS.gene24226.t1 | MTR_2g030335 | 34.653 | 101 | 57 | 2 | 143 | 234 | 27 | 127 | 2.94e-12 | 65.9 |
| MS.gene24226.t1 | MTR_3g094880 | 37.069 | 116 | 59 | 3 | 141 | 254 | 65 | 168 | 1.33e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24226.t1 | AT5G18570 | 50.296 | 169 | 76 | 2 | 120 | 288 | 358 | 518 | 8.63e-48 | 172 |
| MS.gene24226.t1 | AT1G07615 | 38.793 | 232 | 116 | 4 | 73 | 286 | 225 | 448 | 5.82e-38 | 142 |
| MS.gene24226.t1 | AT1G30580 | 33.088 | 136 | 72 | 3 | 143 | 259 | 27 | 162 | 6.84e-16 | 79.0 |
| MS.gene24226.t1 | AT1G56050 | 36.111 | 108 | 59 | 3 | 144 | 241 | 57 | 164 | 1.19e-12 | 69.3 |
| MS.gene24226.t1 | AT4G39520 | 36.842 | 114 | 58 | 3 | 143 | 254 | 68 | 169 | 2.75e-11 | 64.7 |
Find 97 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGGCATTAATGTTGTAAA+TGG | 0.168245 | 1.2:+1802353 | None:intergenic |
| CCACGACCTCACTCTGTTAT+TGG | 0.196696 | 1.2:-1800736 | MS.gene24226:CDS |
| GTTCGTATTTCTGTTCCTTT+AGG | 0.246041 | 1.2:-1805412 | MS.gene24226:intron |
| ACAGTTCTGTAGTCATTTAC+AGG | 0.252618 | 1.2:+1802053 | None:intergenic |
| AGGAGATAAGGGCCGCTTTA+AGG | 0.264646 | 1.2:-1800512 | MS.gene24226:CDS |
| TAGAAATGCCACGGCATAAT+AGG | 0.302506 | 1.2:-1803530 | MS.gene24226:CDS |
| AAATGGATAATCAGCAATAT+CGG | 0.307095 | 1.2:+1802370 | None:intergenic |
| ACTCAAGAAATTATGAGAAT+TGG | 0.328796 | 1.2:-1800859 | MS.gene24226:CDS |
| CCATCAAGGCGTCCAAGATT+TGG | 0.342473 | 1.2:+1802335 | None:intergenic |
| GAAACTTCAGAGCTTGGTTT+TGG | 0.342930 | 1.2:+1800814 | None:intergenic |
| AGCGTTGATTTCCCAGCATT+TGG | 0.349531 | 1.2:+1802419 | None:intergenic |
| ACAACATTAATGCCAAATCT+TGG | 0.357348 | 1.2:-1802347 | MS.gene24226:CDS |
| TGCTGGGAAATCAACGCTTC+TGG | 0.366085 | 1.2:-1802414 | MS.gene24226:CDS |
| TGAAGGAAAAGATACGTTAT+TGG | 0.376575 | 1.2:-1805536 | MS.gene24226:CDS |
| AAAACCAAGCTCTGAAGTTT+CGG | 0.377456 | 1.2:-1800812 | MS.gene24226:CDS |
| CATGGTTAGCGAGATGTTAA+AGG | 0.379680 | 1.2:-1800532 | MS.gene24226:CDS |
| CCAAATCTTGGACGCCTTGA+TGG | 0.397530 | 1.2:-1802335 | MS.gene24226:CDS |
| GATTTGCCTGGTCTTATAGA+AGG | 0.401210 | 1.2:-1802263 | MS.gene24226:CDS |
| TGGAGTTTCATAGTAAGAAT+AGG | 0.401600 | 1.2:-1805516 | MS.gene24226:CDS |
| CACAGTTGTGAAAAGCAAAC+GGG | 0.420716 | 1.2:-1803967 | MS.gene24226:CDS |
| TACATCCCTGCTCCCAAGTT+GGG | 0.426129 | 1.2:+1802308 | None:intergenic |
| ACTAGAAACCAACGGTTCCT+TGG | 0.430294 | 1.2:+1800476 | None:intergenic |
| TATGGTCGTTCAAGGTAATC+AGG | 0.432822 | 1.2:+1801234 | None:intergenic |
| TTGTAGGGACTTCCAAATGC+TGG | 0.444567 | 1.2:-1802431 | MS.gene24226:intron |
| GGTGATCCCAACTTGGGAGC+AGG | 0.459574 | 1.2:-1802314 | MS.gene24226:CDS |
| CGAGATGTTAAAGGAGATAA+GGG | 0.460007 | 1.2:-1800523 | MS.gene24226:CDS |
| TCTTATAGAAGGTGCTCACT+TGG | 0.464858 | 1.2:-1802252 | MS.gene24226:CDS |
| CCTTGATGGTGATCCCAACT+TGG | 0.465028 | 1.2:-1802321 | MS.gene24226:CDS |
| CAACAATGTATGGTCGTTCA+AGG | 0.466565 | 1.2:+1801226 | None:intergenic |
| TGAGCCGAAACTTCAGAGCT+TGG | 0.472376 | 1.2:+1800808 | None:intergenic |
| GCTACATTGGCAGATTTGCC+TGG | 0.472873 | 1.2:-1802275 | MS.gene24226:CDS |
| TCTAAGAAGGACCCGGCTAC+TGG | 0.473999 | 1.2:-1802105 | MS.gene24226:CDS |
| ATCGGGTTTCGCAAGCGTAA+TGG | 0.482247 | 1.2:+1802388 | None:intergenic |
| GCACAGTTGTGAAAAGCAAA+CGG | 0.484997 | 1.2:-1803968 | MS.gene24226:CDS |
| GATGAGAGATGACTCGGATA+AGG | 0.486698 | 1.2:-1803478 | MS.gene24226:intron |
| AACAACATGGACCAGTAGCC+GGG | 0.486773 | 1.2:+1802094 | None:intergenic |
| TTATTCAAAACAACAATGTA+TGG | 0.487346 | 1.2:+1801216 | None:intergenic |
| GCGAGATGTTAAAGGAGATA+AGG | 0.492991 | 1.2:-1800524 | MS.gene24226:CDS |
| ATAATTTCTTGAGTCAATGT+TGG | 0.494238 | 1.2:+1800868 | None:intergenic |
| CGCAACAAGAACTTCATCAC+CGG | 0.498936 | 1.2:+1803917 | None:intergenic |
| ACCTGGGGAGGAAGTTAAGT+TGG | 0.499431 | 1.2:-1802889 | MS.gene24226:CDS |
| TTTACTTCTTACTTGAGGAA+TGG | 0.500469 | 1.2:-1805451 | MS.gene24226:CDS |
| AAGGCAGTGCGTTGATTCCA+AGG | 0.513530 | 1.2:-1800493 | MS.gene24226:CDS |
| CGTTGATTCCAAGGAACCGT+TGG | 0.514117 | 1.2:-1800484 | MS.gene24226:CDS |
| GTGATTATTTATGCTGATGA+AGG | 0.516366 | 1.2:-1805553 | MS.gene24226:CDS |
| GTTGCGAGGGGTGGACAAGG+AGG | 0.518059 | 1.2:-1803900 | MS.gene24226:CDS |
| TTGCGAGGGGTGGACAAGGA+GGG | 0.520295 | 1.2:-1803899 | MS.gene24226:CDS |
| AATGGATAATCAGCAATATC+GGG | 0.521649 | 1.2:+1802371 | None:intergenic |
| ATACTTCCAATGGGTGGTCA+TGG | 0.522317 | 1.2:-1805583 | None:intergenic |
| GTGATGAAGTTCTTGTTGCG+AGG | 0.528670 | 1.2:-1803914 | MS.gene24226:CDS |
| CAGTTCTGTAGTCATTTACA+GGG | 0.534642 | 1.2:+1802054 | None:intergenic |
| TTTGGTTCATGGTCAACCTG+GGG | 0.544159 | 1.2:-1802904 | MS.gene24226:CDS |
| ATACATCCCTGCTCCCAAGT+TGG | 0.545507 | 1.2:+1802307 | None:intergenic |
| TGTAGGGACTTCCAAATGCT+GGG | 0.545787 | 1.2:-1802430 | MS.gene24226:intron |
| TTATTGCAGAAAGCGTATCA+TGG | 0.546103 | 1.2:-1800550 | MS.gene24226:intron |
| CAACAACATGGACCAGTAGC+CGG | 0.547834 | 1.2:+1802093 | None:intergenic |
| TGCGAGGGGTGGACAAGGAG+GGG | 0.550722 | 1.2:-1803898 | MS.gene24226:intron |
| CCAATAACAGAGTGAGGTCG+TGG | 0.551059 | 1.2:+1800736 | None:intergenic |
| GTGATCCCAACTTGGGAGCA+GGG | 0.553268 | 1.2:-1802313 | MS.gene24226:CDS |
| TCCAACTTAACTTCCTCCCC+AGG | 0.554908 | 1.2:+1802888 | None:intergenic |
| CTTGTTGCGAGGGGTGGACA+AGG | 0.554974 | 1.2:-1803903 | MS.gene24226:CDS |
| TGATGAAGTTCTTGTTGCGA+GGG | 0.555435 | 1.2:-1803913 | MS.gene24226:CDS |
| CTTATAGAAGGTGCTCACTT+GGG | 0.556651 | 1.2:-1802251 | MS.gene24226:CDS |
| CAGTAGATGCGTCAACAACA+TGG | 0.566647 | 1.2:+1802081 | None:intergenic |
| TCACCACCATGACCACCCAT+TGG | 0.575301 | 1.2:+1805577 | None:intergenic |
| GGAACAGAAATACGAACAGT+AGG | 0.577522 | 1.2:+1805418 | None:intergenic |
| CTACGAGTTGTAGCCGACGT+TGG | 0.577677 | 1.2:-1802858 | MS.gene24226:CDS |
| GTATTCGTCTGAAGCTACAT+TGG | 0.579587 | 1.2:-1802288 | MS.gene24226:CDS |
| CCAAGTTGGGATCACCATCA+AGG | 0.581733 | 1.2:+1802321 | None:intergenic |
| ATTATGAGAATTGGCAGCGA+TGG | 0.582383 | 1.2:-1800850 | MS.gene24226:CDS |
| GGTTCATGGTCAACCTGGGG+AGG | 0.582643 | 1.2:-1802901 | MS.gene24226:CDS |
| GACTGAAGAAAGTGACCCAA+AGG | 0.583497 | 1.2:-1800779 | MS.gene24226:CDS |
| TGAGGCATCTAAGAAGGACC+CGG | 0.584490 | 1.2:-1802112 | MS.gene24226:CDS |
| GGTGGTAATGTTGATGCTGT+TGG | 0.588083 | 1.2:-1805478 | MS.gene24226:CDS |
| GAAGTTCTTGTTGCGAGGGG+TGG | 0.596690 | 1.2:-1803909 | MS.gene24226:CDS |
| CTTGATGGTGATCCCAACTT+GGG | 0.597546 | 1.2:-1802320 | MS.gene24226:CDS |
| GGAAACTACATACCTCTGGC+AGG | 0.603249 | 1.2:+1801187 | None:intergenic |
| AGAAGGTGCTCACTTGGGAA+AGG | 0.609931 | 1.2:-1802246 | MS.gene24226:intron |
| TCTTTGATACTTCCAATGGG+TGG | 0.614114 | 1.2:-1805589 | None:intergenic |
| TTAGCTGATTTAGCACGACC+CGG | 0.616899 | 1.2:-1803936 | MS.gene24226:CDS |
| TTAGCTTGTTAGAAATGCCA+CGG | 0.620564 | 1.2:-1803539 | MS.gene24226:CDS |
| CTTCCAATGGGTGGTCATGG+TGG | 0.633367 | 1.2:-1805580 | None:intergenic |
| TGAGCACCTTCTATAAGACC+AGG | 0.641306 | 1.2:+1802257 | None:intergenic |
| ATCAACGCACTGCCTTAAAG+CGG | 0.642286 | 1.2:+1800500 | None:intergenic |
| TAACGTGATGAGAGATGACT+CGG | 0.642615 | 1.2:-1803484 | MS.gene24226:CDS |
| GCAACAAGAACTTCATCACC+GGG | 0.643404 | 1.2:+1803918 | None:intergenic |
| GAATAAGATTGACCTGCCAG+AGG | 0.647898 | 1.2:-1801199 | MS.gene24226:intron |
| AGGTTTAATGCGAAACGTGG+TGG | 0.659737 | 1.2:-1805496 | MS.gene24226:CDS |
| CAACGTCGGCTACAACTCGT+AGG | 0.664807 | 1.2:+1802859 | None:intergenic |
| CTAACTCCAATAACAGAGTG+AGG | 0.666857 | 1.2:+1800730 | None:intergenic |
| AATAGGTTTAATGCGAAACG+TGG | 0.677121 | 1.2:-1805499 | MS.gene24226:CDS |
| ACTTACAATTAAACCAACGT+CGG | 0.682305 | 1.2:+1802845 | None:intergenic |
| TGTGGCACACTAGAAACCAA+CGG | 0.704503 | 1.2:+1800468 | None:intergenic |
| GATGAAGTTCTTGTTGCGAG+GGG | 0.705915 | 1.2:-1803912 | MS.gene24226:CDS |
| ACAGTTGTGAAAAGCAAACG+GGG | 0.706082 | 1.2:-1803966 | MS.gene24226:CDS |
| CCCAAAGGAAAAGAAACTTG+AGG | 0.715840 | 1.2:-1800764 | MS.gene24226:CDS |
| ATAGGATGCAAATCTCACTG+TGG | 0.804712 | 1.2:+1800450 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACTTGATTAAAAATTCAA+CGG | + | chr1.2:1804480-1804499 | None:intergenic | 15.0% |
| !! | AATAATATCATATAAGATGT+TGG | + | chr1.2:1801203-1801222 | None:intergenic | 15.0% |
| !! | ATAAATAAATTCATACTCAT+TGG | - | chr1.2:1802323-1802342 | MS.gene24226:CDS | 15.0% |
| !! | ATTATGTTTGATTAATTGAT+TGG | - | chr1.2:1800965-1800984 | MS.gene24226:intron | 15.0% |
| !! | TTGCTTCTTAAAAAAAATAA+TGG | + | chr1.2:1804115-1804134 | None:intergenic | 15.0% |
| !!! | AAATCAAGTTTAGTTTTTTA+TGG | + | chr1.2:1802019-1802038 | None:intergenic | 15.0% |
| !!! | AATCAAGTTTAGTTTTTTAT+GGG | + | chr1.2:1802018-1802037 | None:intergenic | 15.0% |
| !!! | AATGTTGTTATGTTTTTATT+AGG | - | chr1.2:1800931-1800950 | MS.gene24226:intron | 15.0% |
| !!! | AATTTCATTTTTTGATGTTA+TGG | - | chr1.2:1800659-1800678 | MS.gene24226:intron | 15.0% |
| !!! | AATTTCCTATTATTTTGTAA+AGG | - | chr1.2:1804911-1804930 | MS.gene24226:intron | 15.0% |
| !!! | ATTTCCTATTATTTTGTAAA+GGG | - | chr1.2:1804912-1804931 | MS.gene24226:intron | 15.0% |
| !!! | ATTTTTTAACTTCATATCAA+TGG | + | chr1.2:1804407-1804426 | None:intergenic | 15.0% |
| !!! | GATTTTTTTTTAATCTTTCA+GGG | - | chr1.2:1803886-1803905 | MS.gene24226:intron | 15.0% |
| !!! | GTCTAAATCTTTTTTTAATA+TGG | - | chr1.2:1803458-1803477 | MS.gene24226:intron | 15.0% |
| !!! | TGATTTTTTTTTAATCTTTC+AGG | - | chr1.2:1803885-1803904 | MS.gene24226:intron | 15.0% |
| !!! | TGTTCATTAATTTTAATTTC+AGG | - | chr1.2:1805133-1805152 | MS.gene24226:intron | 15.0% |
| !!! | TTATATTAGTTGACTTTTTT+TGG | + | chr1.2:1801477-1801496 | None:intergenic | 15.0% |
| !! | AATCTCAAAATTATCATCAT+TGG | + | chr1.2:1803330-1803349 | None:intergenic | 20.0% |
| !! | AGTTTATTATTGTGAATTAC+AGG | - | chr1.2:1802048-1802067 | MS.gene24226:CDS | 20.0% |
| !! | ATATTTAATAAGCAGCTATA+TGG | + | chr1.2:1803866-1803885 | None:intergenic | 20.0% |
| !! | ATGCAATCTATAAGATTATT+CGG | + | chr1.2:1804306-1804325 | None:intergenic | 20.0% |
| !! | CATATTACAAGATAGTAATA+CGG | + | chr1.2:1805088-1805107 | None:intergenic | 20.0% |
| !! | GTAAGATAAAATTTAACTGA+TGG | + | chr1.2:1801823-1801842 | None:intergenic | 20.0% |
| !! | TAAATTATCAGAGCTAATAA+AGG | + | chr1.2:1804542-1804561 | None:intergenic | 20.0% |
| !! | TTAATATGGTGAACTAAAAT+TGG | - | chr1.2:1803472-1803491 | MS.gene24226:intron | 20.0% |
| !! | TTATTCAAAACAACAATGTA+TGG | + | chr1.2:1804825-1804844 | None:intergenic | 20.0% |
| !! | TTTATTCGTAAGTACAAAAA+TGG | + | chr1.2:1801309-1801328 | None:intergenic | 20.0% |
| !!! | AAAAAATAATGGAGTCTATA+AGG | + | chr1.2:1804104-1804123 | None:intergenic | 20.0% |
| !!! | AAAAATAATGGAGTCTATAA+GGG | + | chr1.2:1804103-1804122 | None:intergenic | 20.0% |
| !!! | AAGATACATTTTAAAATGAC+AGG | + | chr1.2:1802986-1803005 | None:intergenic | 20.0% |
| !!! | ATGATAATTTTGAGATTTCT+GGG | - | chr1.2:1803333-1803352 | MS.gene24226:intron | 20.0% |
| !!! | ATGTCTTTTCATATTTTAAC+TGG | - | chr1.2:1801621-1801640 | MS.gene24226:intron | 20.0% |
| !!! | ATTTCATATTCAGTTTTATC+AGG | - | chr1.2:1802840-1802859 | MS.gene24226:intron | 20.0% |
| !!! | CTGTAACAATTTTAAAATAC+AGG | + | chr1.2:1803112-1803131 | None:intergenic | 20.0% |
| !!! | CTGTATTTTAAAATTGTTAC+AGG | - | chr1.2:1803110-1803129 | MS.gene24226:intron | 20.0% |
| !!! | GTTTTATCTTACATTAAGAT+AGG | + | chr1.2:1802962-1802981 | None:intergenic | 20.0% |
| !!! | TAAATTTTATCTTACCACTT+TGG | - | chr1.2:1801828-1801847 | MS.gene24226:intron | 20.0% |
| !!! | TTAATTTTAATTTCAGGTTG+AGG | - | chr1.2:1805139-1805158 | MS.gene24226:intron | 20.0% |
| !!! | TTTAAAATTGTTACAGGTTT+TGG | - | chr1.2:1803116-1803135 | MS.gene24226:intron | 20.0% |
| !!! | TTTAGATTCAAGTTTTTTCT+TGG | - | chr1.2:1804037-1804056 | MS.gene24226:intron | 20.0% |
| ! | AAAGTGAAATATCCCTTTAA+AGG | + | chr1.2:1804360-1804379 | None:intergenic | 25.0% |
| ! | AAATGGATAATCAGCAATAT+CGG | + | chr1.2:1803671-1803690 | None:intergenic | 25.0% |
| ! | AAATTTGCAAACAAACCTAA+AGG | + | chr1.2:1800644-1800663 | None:intergenic | 25.0% |
| ! | AACAAACAGAGAACTAAATA+AGG | + | chr1.2:1803238-1803257 | None:intergenic | 25.0% |
| ! | AATTTCACTTGGACAAAAAA+AGG | + | chr1.2:1803505-1803524 | None:intergenic | 25.0% |
| ! | ACAAAATTACTAACCATACA+TGG | + | chr1.2:1801854-1801873 | None:intergenic | 25.0% |
| ! | ACAACAATAATAACCAAGAT+AGG | + | chr1.2:1802440-1802459 | None:intergenic | 25.0% |
| ! | ACTCAAGAAATTATGAGAAT+TGG | - | chr1.2:1805179-1805198 | MS.gene24226:intron | 25.0% |
| ! | ATAATTTCTTGAGTCAATGT+TGG | + | chr1.2:1805173-1805192 | None:intergenic | 25.0% |
| ! | ATCTTCATAATAAATAACCG+TGG | - | chr1.2:1803268-1803287 | MS.gene24226:intron | 25.0% |
| ! | ATGTGGATAAGATTAGAATA+AGG | - | chr1.2:1801281-1801300 | MS.gene24226:intron | 25.0% |
| ! | ATTAAAAACTCCAAAACATG+AGG | + | chr1.2:1804732-1804751 | None:intergenic | 25.0% |
| ! | ATTGTGCATAAAGTAATTTG+TGG | - | chr1.2:1804686-1804705 | MS.gene24226:intron | 25.0% |
| ! | ATTTCACTTGGACAAAAAAA+GGG | + | chr1.2:1803504-1803523 | None:intergenic | 25.0% |
| ! | CACAATAATAAACTCAATGA+GGG | + | chr1.2:1802042-1802061 | None:intergenic | 25.0% |
| ! | CAGAAAATGAAATGAAAACA+AGG | + | chr1.2:1801944-1801963 | None:intergenic | 25.0% |
| ! | GAAATTTGGTTGATCAATTA+TGG | + | chr1.2:1802749-1802768 | None:intergenic | 25.0% |
| ! | GATATATAGACTGTCTAAAT+CGG | + | chr1.2:1800872-1800891 | None:intergenic | 25.0% |
| ! | GATTTACATTGTAATGTTAG+AGG | - | chr1.2:1801019-1801038 | MS.gene24226:intron | 25.0% |
| ! | TCACAATAATAAACTCAATG+AGG | + | chr1.2:1802043-1802062 | None:intergenic | 25.0% |
| ! | TGTTCAAAAACTATTGTTTC+TGG | + | chr1.2:1802887-1802906 | None:intergenic | 25.0% |
| ! | TTAAAAACTCCAAAACATGA+GGG | + | chr1.2:1804731-1804750 | None:intergenic | 25.0% |
| ! | TTACATTAAGATAGGAACAA+AGG | + | chr1.2:1802954-1802973 | None:intergenic | 25.0% |
| ! | TTATAAGTTCTTCCAATTAG+TGG | - | chr1.2:1800807-1800826 | MS.gene24226:CDS | 25.0% |
| ! | TTTGGCATTAATGTTGTAAA+TGG | + | chr1.2:1803688-1803707 | None:intergenic | 25.0% |
| !! | ATGAAGTTAATCTTGTTGTA+GGG | - | chr1.2:1803592-1803611 | MS.gene24226:intron | 25.0% |
| !! | TGACAAATTAGCAAGTATTT+TGG | + | chr1.2:1802775-1802794 | None:intergenic | 25.0% |
| !!! | AAGCTATTTTTGATAACTTG+TGG | - | chr1.2:1800736-1800755 | MS.gene24226:CDS | 25.0% |
| !!! | AAGTATTTTGGACAGAAATT+TGG | + | chr1.2:1802763-1802782 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTCTTGGTTTAAC+AGG | - | chr1.2:1804046-1804065 | MS.gene24226:intron | 25.0% |
| !!! | ACATAATAAGTACTGAAAAG+TGG | + | chr1.2:1801426-1801445 | None:intergenic | 25.0% |
| !!! | AGTTTTAAAAACATTGGTCA+TGG | - | chr1.2:1801660-1801679 | MS.gene24226:intron | 25.0% |
| !!! | ATAATAAGTACTGAAAAGTG+GGG | + | chr1.2:1801424-1801443 | None:intergenic | 25.0% |
| !!! | CAATGTTTTAAAAACTGAAC+TGG | - | chr1.2:1801506-1801525 | MS.gene24226:intron | 25.0% |
| !!! | CATAATAAGTACTGAAAAGT+GGG | + | chr1.2:1801425-1801444 | None:intergenic | 25.0% |
| !!! | GATGATAATTTTGAGATTTC+TGG | - | chr1.2:1803332-1803351 | MS.gene24226:intron | 25.0% |
| !!! | TTTTTGATAACTTGTGGTTT+TGG | - | chr1.2:1800742-1800761 | MS.gene24226:CDS | 25.0% |
| AAAAGACATTGTTCACGATT+CGG | + | chr1.2:1801610-1801629 | None:intergenic | 30.0% | |
| AAGAACAAACAGGAAATTTG+TGG | + | chr1.2:1804588-1804607 | None:intergenic | 30.0% | |
| AATCCAAAAGCAAAAGAAAG+AGG | + | chr1.2:1804619-1804638 | None:intergenic | 30.0% | |
| AATGGATAATCAGCAATATC+GGG | + | chr1.2:1803670-1803689 | None:intergenic | 30.0% | |
| AATTTGTGGCTATCAATAGA+TGG | + | chr1.2:1804574-1804593 | None:intergenic | 30.0% | |
| ACAACATTAATGCCAAATCT+TGG | - | chr1.2:1803691-1803710 | MS.gene24226:intron | 30.0% | |
| ACTTACAATTAAACCAACGT+CGG | + | chr1.2:1803196-1803215 | None:intergenic | 30.0% | |
| AGTATAGCTTAGATGGTAAA+AGG | - | chr1.2:1801351-1801370 | MS.gene24226:intron | 30.0% | |
| ATATACTCAAACTCAGATTG+AGG | + | chr1.2:1804886-1804905 | None:intergenic | 30.0% | |
| ATCAACATTATCTTCTTTCC+TGG | - | chr1.2:1802392-1802411 | MS.gene24226:CDS | 30.0% | |
| ATTCTTCAACAATCAGAGAA+GGG | - | chr1.2:1804324-1804343 | MS.gene24226:intron | 30.0% | |
| ATTGAAGGATTGAATCAACA+AGG | - | chr1.2:1802673-1802692 | MS.gene24226:intron | 30.0% | |
| CACAATCTTCACTAAAATCA+TGG | + | chr1.2:1803379-1803398 | None:intergenic | 30.0% | |
| CAGCTATATGGTTTAAAAGA+TGG | + | chr1.2:1803854-1803873 | None:intergenic | 30.0% | |
| CATTGTAATGTTAGAGGATT+TGG | - | chr1.2:1801025-1801044 | MS.gene24226:intron | 30.0% | |
| GAAGCAATTTATTCACGAAA+TGG | + | chr1.2:1801885-1801904 | None:intergenic | 30.0% | |
| GGAAAGAATAAAGAACAAAC+AGG | + | chr1.2:1804598-1804617 | None:intergenic | 30.0% | |
| GTGATTATTTATGCTGATGA+AGG | - | chr1.2:1800485-1800504 | MS.gene24226:CDS | 30.0% | |
| TAAGTTGTACAGATTCACAT+TGG | - | chr1.2:1802267-1802286 | MS.gene24226:CDS | 30.0% | |
| TACAAGATAGTAATACGGAA+GGG | + | chr1.2:1805083-1805102 | None:intergenic | 30.0% | |
| TACCATCTAAGCTATACTTA+CGG | + | chr1.2:1801349-1801368 | None:intergenic | 30.0% | |
| TATACTCAAACTCAGATTGA+GGG | + | chr1.2:1804885-1804904 | None:intergenic | 30.0% | |
| TCTCTCAGTTCAATTAATGT+TGG | - | chr1.2:1802708-1802727 | MS.gene24226:intron | 30.0% | |
| TGAAGGAAAAGATACGTTAT+TGG | - | chr1.2:1800502-1800521 | MS.gene24226:CDS | 30.0% | |
| TGGAGTTTCATAGTAAGAAT+AGG | - | chr1.2:1800522-1800541 | MS.gene24226:CDS | 30.0% | |
| TGTGAAATGAAATGCTATGA+AGG | + | chr1.2:1805389-1805408 | None:intergenic | 30.0% | |
| TTACAAGATAGTAATACGGA+AGG | + | chr1.2:1805084-1805103 | None:intergenic | 30.0% | |
| TTTACTTCTTACTTGAGGAA+TGG | - | chr1.2:1800587-1800606 | MS.gene24226:intron | 30.0% | |
| TTTGAAAAGCAGTATAAGCA+TGG | + | chr1.2:1801545-1801564 | None:intergenic | 30.0% | |
| ! | GATGAAGTTAATCTTGTTGT+AGG | - | chr1.2:1803591-1803610 | MS.gene24226:intron | 30.0% |
| ! | TCATTCTAATTCTGTTTTGC+AGG | - | chr1.2:1804764-1804783 | MS.gene24226:intron | 30.0% |
| ! | TTATCATTTCCCTCATGTTT+TGG | - | chr1.2:1804719-1804738 | MS.gene24226:intron | 30.0% |
| ! | TTTCCTCTTTCTTTTGCTTT+TGG | - | chr1.2:1804613-1804632 | MS.gene24226:intron | 30.0% |
| ! | TTTTAGTCAAATGCTTGGAA+GGG | - | chr1.2:1804498-1804517 | MS.gene24226:intron | 30.0% |
| ! | TTTTTAATCTTTCAGGGTCT+TGG | - | chr1.2:1803892-1803911 | MS.gene24226:intron | 30.0% |
| !! | AAAGGGATATTTCACTTTTG+AGG | - | chr1.2:1804362-1804381 | MS.gene24226:intron | 30.0% |
| !! | GATTTTAGTGAAGATTGTGA+AGG | - | chr1.2:1803380-1803399 | MS.gene24226:intron | 30.0% |
| !! | GTGTTTTTACTTCTTACTTG+AGG | - | chr1.2:1800582-1800601 | MS.gene24226:intron | 30.0% |
| !! | TAATAAGTACTGAAAAGTGG+GGG | + | chr1.2:1801423-1801442 | None:intergenic | 30.0% |
| !! | TCAAGTGTGTCACTTAATAT+GGG | + | chr1.2:1801071-1801090 | None:intergenic | 30.0% |
| !! | TCCTATTATTTTGTAAAGGG+AGG | - | chr1.2:1804915-1804934 | MS.gene24226:intron | 30.0% |
| !! | TTTTTAGTCAAATGCTTGGA+AGG | - | chr1.2:1804497-1804516 | MS.gene24226:intron | 30.0% |
| !!! | ATTTTTTGAGGCATCTAAGA+AGG | - | chr1.2:1803920-1803939 | MS.gene24226:CDS | 30.0% |
| !!! | CAAGTTTTTAGTCAAATGCT+TGG | - | chr1.2:1804493-1804512 | MS.gene24226:intron | 30.0% |
| !!! | GACCAATGTTTTTAAAACTG+AGG | + | chr1.2:1801659-1801678 | None:intergenic | 30.0% |
| !!! | GTTTTTGAGTTCATCATAGT+TGG | - | chr1.2:1800990-1801009 | MS.gene24226:intron | 30.0% |
| !!! | TGCCTCAGTTTTAAAAACAT+TGG | - | chr1.2:1801654-1801673 | MS.gene24226:intron | 30.0% |
| AACAGGTTTACTTGAAGTTG+TGG | - | chr1.2:1804063-1804082 | MS.gene24226:intron | 35.0% | |
| AACCACAACTAATACTTTCC+AGG | + | chr1.2:1802413-1802432 | None:intergenic | 35.0% | |
| AATAGGTTTAATGCGAAACG+TGG | - | chr1.2:1800539-1800558 | MS.gene24226:CDS | 35.0% | |
| ACAGGTTTACTTGAAGTTGT+GGG | - | chr1.2:1804064-1804083 | MS.gene24226:intron | 35.0% | |
| ACAGTTCTGTAGTCATTTAC+AGG | + | chr1.2:1803988-1804007 | None:intergenic | 35.0% | |
| ACATGAGGGAAATGATAAGT+TGG | + | chr1.2:1804717-1804736 | None:intergenic | 35.0% | |
| ACCATCTAAGCTATACTTAC+GGG | + | chr1.2:1801348-1801367 | None:intergenic | 35.0% | |
| ACTTCATATCAATGGTTGAG+AGG | + | chr1.2:1804399-1804418 | None:intergenic | 35.0% | |
| ATACATTTAGCCCCTGAAAT+GGG | - | chr1.2:1804982-1805001 | MS.gene24226:intron | 35.0% | |
| ATCATAGTTCCAGAGAGATT+TGG | + | chr1.2:1802808-1802827 | None:intergenic | 35.0% | |
| ATTAATTGAACTGAGAGAGC+AGG | + | chr1.2:1802706-1802725 | None:intergenic | 35.0% | |
| CAGTTCTGTAGTCATTTACA+GGG | + | chr1.2:1803987-1804006 | None:intergenic | 35.0% | |
| CATTCTTCAACAATCAGAGA+AGG | - | chr1.2:1804323-1804342 | MS.gene24226:intron | 35.0% | |
| CATTGTACTCCATTCTATGT+TGG | - | chr1.2:1801256-1801275 | MS.gene24226:intron | 35.0% | |
| CCATCATTAGAGACTTCATT+AGG | - | chr1.2:1802645-1802664 | MS.gene24226:intron | 35.0% | |
| CCTAATGAAGTCTCTAATGA+TGG | + | chr1.2:1802648-1802667 | None:intergenic | 35.0% | |
| CGAGATGTTAAAGGAGATAA+GGG | - | chr1.2:1805515-1805534 | MS.gene24226:CDS | 35.0% | |
| CGGCAAACATTATGTATACA+TGG | + | chr1.2:1804460-1804479 | None:intergenic | 35.0% | |
| CTAGTGTAAAGTAGATGTCA+CGG | - | chr1.2:1802918-1802937 | MS.gene24226:intron | 35.0% | |
| CTTCATTAGGCATGTATTGA+AGG | - | chr1.2:1802658-1802677 | MS.gene24226:intron | 35.0% | |
| GAATCTGTACAACTTACCTA+CGG | + | chr1.2:1802263-1802282 | None:intergenic | 35.0% | |
| GCATTTCTAACAAGCTAATC+TGG | + | chr1.2:1802497-1802516 | None:intergenic | 35.0% | |
| GCCTCCCTTTACAAAATAAT+AGG | + | chr1.2:1804919-1804938 | None:intergenic | 35.0% | |
| GGTAATGTACTCTGTAACTA+AGG | - | chr1.2:1802344-1802363 | MS.gene24226:CDS | 35.0% | |
| TCCACATTTCCAACATAGAA+TGG | + | chr1.2:1801268-1801287 | None:intergenic | 35.0% | |
| TCCATTCTATGTTGGAAATG+TGG | - | chr1.2:1801264-1801283 | MS.gene24226:intron | 35.0% | |
| TTCTTCAACAATCAGAGAAG+GGG | - | chr1.2:1804325-1804344 | MS.gene24226:intron | 35.0% | |
| TTTGTCCAAGTGAAATTCGT+TGG | - | chr1.2:1803508-1803527 | MS.gene24226:CDS | 35.0% | |
| ! | ATGGCTCTGTTTGGATAAAT+AGG | - | chr1.2:1800678-1800697 | MS.gene24226:intron | 35.0% |
| ! | CCTCAAGTTTCTTTTCCTTT+GGG | + | chr1.2:1805277-1805296 | None:intergenic | 35.0% |
| ! | GCTTTTCAAATGCTAGAATC+CGG | - | chr1.2:1801555-1801574 | MS.gene24226:intron | 35.0% |
| ! | GGGAATTTGGTTCCTTTAAA+GGG | - | chr1.2:1804345-1804364 | MS.gene24226:intron | 35.0% |
| ! | GTTCGTATTTCTGTTCCTTT+AGG | - | chr1.2:1800626-1800645 | MS.gene24226:intron | 35.0% |
| ! | TACTTTTCATAGTACCCAGT+CGG | - | chr1.2:1805441-1805460 | MS.gene24226:CDS | 35.0% |
| ! | TATTTCTGTCCAAATCTCTC+TGG | - | chr1.2:1802796-1802815 | MS.gene24226:intron | 35.0% |
| ! | TCCTCAAGTTTCTTTTCCTT+TGG | + | chr1.2:1805278-1805297 | None:intergenic | 35.0% |
| ! | TGGCTCTGTTTGGATAAATA+GGG | - | chr1.2:1800679-1800698 | MS.gene24226:intron | 35.0% |
| ! | TTATTGCAGAAAGCGTATCA+TGG | - | chr1.2:1805488-1805507 | MS.gene24226:CDS | 35.0% |
| ! | TTTAAGACTAATCTAGCCGT+AGG | - | chr1.2:1802244-1802263 | MS.gene24226:intron | 35.0% |
| ! | TTTGATGTTATGGCTCTGTT+TGG | - | chr1.2:1800669-1800688 | MS.gene24226:intron | 35.0% |
| !! | AAAACCAAGCTCTGAAGTTT+CGG | - | chr1.2:1805226-1805245 | MS.gene24226:intron | 35.0% |
| !! | ACGGCTAGATTAGTCTTAAA+TGG | + | chr1.2:1802244-1802263 | None:intergenic | 35.0% |
| !! | GAATTGATGACAGTTTTGTC+CGG | + | chr1.2:1801577-1801596 | None:intergenic | 35.0% |
| !! | GGTACTCGTTTGATTAGTTT+GGG | + | chr1.2:1804285-1804304 | None:intergenic | 35.0% |
| !! | GTCAAGTGTGTCACTTAATA+TGG | + | chr1.2:1801072-1801091 | None:intergenic | 35.0% |
| !! | TGTTGATACAGTAGTTCTGA+AGG | + | chr1.2:1802379-1802398 | None:intergenic | 35.0% |
| !! | TTAGCTTGTTAGAAATGCCA+CGG | - | chr1.2:1802499-1802518 | MS.gene24226:intron | 35.0% |
| !! | TTCCTGGAAAGTATTAGTTG+TGG | - | chr1.2:1802408-1802427 | MS.gene24226:CDS | 35.0% |
| !! | TTGGATTTTGAGTCAAAAGC+AGG | - | chr1.2:1804632-1804651 | MS.gene24226:intron | 35.0% |
| !!! | GTGTTGGTTTTTCTAGTCAT+GGG | + | chr1.2:1804243-1804262 | None:intergenic | 35.0% |
| !!! | GTTTTTTTCCTATTATGCCG+TGG | + | chr1.2:1802519-1802538 | None:intergenic | 35.0% |
| !!! | TACCTTTTGCTGTTCACTAT+TGG | + | chr1.2:1804155-1804174 | None:intergenic | 35.0% |
| !!! | TGTGTTGGTTTTTCTAGTCA+TGG | + | chr1.2:1804244-1804263 | None:intergenic | 35.0% |
| !!! | TGTTGGTTTTTCTAGTCATG+GGG | + | chr1.2:1804242-1804261 | None:intergenic | 35.0% |
| !!! | TTGTTACAGGTTTTGGTTCA+TGG | - | chr1.2:1803123-1803142 | MS.gene24226:intron | 35.0% |
| AACCACTCATCAACATTCCA+CGG | + | chr1.2:1803288-1803307 | None:intergenic | 40.0% | |
| ACAATCAGAGAAGGGGAATT+TGG | - | chr1.2:1804332-1804351 | MS.gene24226:intron | 40.0% | |
| ACAGTTGTGAAAAGCAAACG+GGG | - | chr1.2:1802072-1802091 | MS.gene24226:CDS | 40.0% | |
| ACTGAACTGGTGTGAACATT+AGG | - | chr1.2:1801519-1801538 | MS.gene24226:intron | 40.0% | |
| AGTAGGAAACTACATACCTC+TGG | + | chr1.2:1804858-1804877 | None:intergenic | 40.0% | |
| ATTATGAGAATTGGCAGCGA+TGG | - | chr1.2:1805188-1805207 | MS.gene24226:intron | 40.0% | |
| CAACAATGTATGGTCGTTCA+AGG | + | chr1.2:1804815-1804834 | None:intergenic | 40.0% | |
| CACAGTTGTGAAAAGCAAAC+GGG | - | chr1.2:1802071-1802090 | MS.gene24226:CDS | 40.0% | |
| CACCAATAGTGAACAGCAAA+AGG | - | chr1.2:1804150-1804169 | MS.gene24226:intron | 40.0% | |
| CATACATTTAGCCCCTGAAA+TGG | - | chr1.2:1804981-1805000 | MS.gene24226:intron | 40.0% | |
| CATGGTTAGCGAGATGTTAA+AGG | - | chr1.2:1805506-1805525 | MS.gene24226:CDS | 40.0% | |
| CCCAAAGGAAAAGAAACTTG+AGG | - | chr1.2:1805274-1805293 | MS.gene24226:intron | 40.0% | |
| CTAACTCCAATAACAGAGTG+AGG | + | chr1.2:1805311-1805330 | None:intergenic | 40.0% | |
| CTTACTTGATTGCATCTCTC+TGG | - | chr1.2:1802619-1802638 | MS.gene24226:intron | 40.0% | |
| GAAGATTGTGAAGGATAGTG+TGG | - | chr1.2:1803389-1803408 | MS.gene24226:intron | 40.0% | |
| GCACAGTTGTGAAAAGCAAA+CGG | - | chr1.2:1802070-1802089 | MS.gene24226:CDS | 40.0% | |
| GCGAGATGTTAAAGGAGATA+AGG | - | chr1.2:1805514-1805533 | MS.gene24226:CDS | 40.0% | |
| GGAACAGAAATACGAACAGT+AGG | + | chr1.2:1800623-1800642 | None:intergenic | 40.0% | |
| GTGAAAGACTGCTTTGTAGA+AGG | - | chr1.2:1803542-1803561 | MS.gene24226:CDS | 40.0% | |
| GTTGTACAGATTCACATTGG+TGG | - | chr1.2:1802270-1802289 | MS.gene24226:CDS | 40.0% | |
| GTTGTGGTTTACACCTATCT+TGG | - | chr1.2:1802424-1802443 | MS.gene24226:CDS | 40.0% | |
| TAACGTGATGAGAGATGACT+CGG | - | chr1.2:1802554-1802573 | MS.gene24226:intron | 40.0% | |
| TACAGCCAACGAATTTCACT+TGG | + | chr1.2:1803516-1803535 | None:intergenic | 40.0% | |
| TACTTGAAGTTGTGGGTGTT+TGG | - | chr1.2:1804071-1804090 | MS.gene24226:intron | 40.0% | |
| TAGAAATGCCACGGCATAAT+AGG | - | chr1.2:1802508-1802527 | MS.gene24226:intron | 40.0% | |
| TAGCTTAGATGGTAAAAGGC+TGG | - | chr1.2:1801355-1801374 | MS.gene24226:intron | 40.0% | |
| TATGGTCGTTCAAGGTAATC+AGG | + | chr1.2:1804807-1804826 | None:intergenic | 40.0% | |
| TCCCGTAAGTATAGCTTAGA+TGG | - | chr1.2:1801344-1801363 | MS.gene24226:intron | 40.0% | |
| TGATGAAGTTCTTGTTGCGA+GGG | - | chr1.2:1802125-1802144 | MS.gene24226:CDS | 40.0% | |
| TGCTTGGAAGGGAGTTTAAT+TGG | - | chr1.2:1804509-1804528 | MS.gene24226:intron | 40.0% | |
| TGGAGGGACATTTGATATGT+TGG | - | chr1.2:1801375-1801394 | MS.gene24226:intron | 40.0% | |
| TTAGATGGTAAAAGGCTGGA+GGG | - | chr1.2:1801359-1801378 | MS.gene24226:intron | 40.0% | |
| ! | CGGTACTCGTTTGATTAGTT+TGG | + | chr1.2:1804286-1804305 | None:intergenic | 40.0% |
| ! | GAAACTTCAGAGCTTGGTTT+TGG | + | chr1.2:1805227-1805246 | None:intergenic | 40.0% |
| ! | GGGGAATTTGGTTCCTTTAA+AGG | - | chr1.2:1804344-1804363 | MS.gene24226:intron | 40.0% |
| ! | GTATTCGTCTGAAGCTACAT+TGG | - | chr1.2:1803750-1803769 | MS.gene24226:intron | 40.0% |
| ! | GTTTCTACATCTAGAACCCA+AGG | - | chr1.2:1805012-1805031 | MS.gene24226:intron | 40.0% |
| ! | TGAACAGCAAAAGGTATGCT+AGG | - | chr1.2:1804159-1804178 | MS.gene24226:intron | 40.0% |
| !! | AAATTTTGACCTAAGCCGAC+TGG | + | chr1.2:1805459-1805478 | None:intergenic | 40.0% |
| !! | AATTTTGACCTAAGCCGACT+GGG | + | chr1.2:1805458-1805477 | None:intergenic | 40.0% |
| !! | CTTATAGAAGGTGCTCACTT+GGG | - | chr1.2:1803787-1803806 | MS.gene24226:intron | 40.0% |
| !! | CTTCCAATTAGTGGTGTTAC+AGG | - | chr1.2:1800816-1800835 | MS.gene24226:CDS | 40.0% |
| !! | GATGTGTTCTAAAGCATGAG+TGG | - | chr1.2:1803413-1803432 | MS.gene24226:intron | 40.0% |
| !! | GATTTGCCTGGTCTTATAGA+AGG | - | chr1.2:1803775-1803794 | MS.gene24226:intron | 40.0% |
| !! | GTGTGTCACTTAATATGGGA+CGG | + | chr1.2:1801067-1801086 | None:intergenic | 40.0% |
| !! | TCTTATAGAAGGTGCTCACT+TGG | - | chr1.2:1803786-1803805 | MS.gene24226:intron | 40.0% |
| !!! | GTCTTGGTCGCAATTTTTTG+AGG | - | chr1.2:1803908-1803927 | MS.gene24226:CDS | 40.0% |
| !!! | GTTGGTTTTTCTAGTCATGG+GGG | + | chr1.2:1804241-1804260 | None:intergenic | 40.0% |
| !!! | TTGGGATTTTTTGTGCGTTG+AGG | + | chr1.2:1804267-1804286 | None:intergenic | 40.0% |
| !!! | TTTTGGTTCATGGTCAACCT+GGG | - | chr1.2:1803133-1803152 | MS.gene24226:intron | 40.0% |
| AAACAGAGCCTCCCATTTCA+GGG | + | chr1.2:1804996-1805015 | None:intergenic | 45.0% | |
| ACTAGAAACCAACGGTTCCT+TGG | + | chr1.2:1805565-1805584 | None:intergenic | 45.0% | |
| AGGTTTAATGCGAAACGTGG+TGG | - | chr1.2:1800542-1800561 | MS.gene24226:CDS | 45.0% | |
| ATCAACGCACTGCCTTAAAG+CGG | + | chr1.2:1805541-1805560 | None:intergenic | 45.0% | |
| ATCATTGCGGAGTCTAGTGA+GGG | - | chr1.2:1804957-1804976 | MS.gene24226:intron | 45.0% | |
| ATGGTAAAGTAGACGCCATG+TGG | + | chr1.2:1805046-1805065 | None:intergenic | 45.0% | |
| CAGTAGATGCGTCAACAACA+TGG | + | chr1.2:1803960-1803979 | None:intergenic | 45.0% | |
| CGCAACAAGAACTTCATCAC+CGG | + | chr1.2:1802124-1802143 | None:intergenic | 45.0% | |
| CTAACCATACATGGCCAAAG+TGG | + | chr1.2:1801845-1801864 | None:intergenic | 45.0% | |
| CTCAGATTGAGGGTAGTAGT+AGG | + | chr1.2:1804875-1804894 | None:intergenic | 45.0% | |
| CTTACCACTTTGGCCATGTA+TGG | - | chr1.2:1801838-1801857 | MS.gene24226:intron | 45.0% | |
| CTTAGATGGTAAAAGGCTGG+AGG | - | chr1.2:1801358-1801377 | MS.gene24226:intron | 45.0% | |
| GAATAAGATTGACCTGCCAG+AGG | - | chr1.2:1804839-1804858 | MS.gene24226:intron | 45.0% | |
| GACTGAAGAAAGTGACCCAA+AGG | - | chr1.2:1805259-1805278 | MS.gene24226:intron | 45.0% | |
| GATGAAGTTCTTGTTGCGAG+GGG | - | chr1.2:1802126-1802145 | MS.gene24226:CDS | 45.0% | |
| GCAACAAGAACTTCATCACC+GGG | + | chr1.2:1802123-1802142 | None:intergenic | 45.0% | |
| GCACCTGTAACACCACTAAT+TGG | + | chr1.2:1800822-1800841 | None:intergenic | 45.0% | |
| GTCACTTAATATGGGACGGA+GGG | + | chr1.2:1801063-1801082 | None:intergenic | 45.0% | |
| GTGATGAAGTTCTTGTTGCG+AGG | - | chr1.2:1802124-1802143 | MS.gene24226:CDS | 45.0% | |
| TAATACGGAAGGGTGAGCTT+TGG | + | chr1.2:1805073-1805092 | None:intergenic | 45.0% | |
| TCACTAGACTCCGCAATGAT+GGG | + | chr1.2:1804957-1804976 | None:intergenic | 45.0% | |
| TGAGCACCTTCTATAAGACC+AGG | + | chr1.2:1803784-1803803 | None:intergenic | 45.0% | |
| TGTAGGGACTTCCAAATGCT+GGG | - | chr1.2:1803608-1803627 | MS.gene24226:intron | 45.0% | |
| TGTGGCACACTAGAAACCAA+CGG | + | chr1.2:1805573-1805592 | None:intergenic | 45.0% | |
| TTGTAGGGACTTCCAAATGC+TGG | - | chr1.2:1803607-1803626 | MS.gene24226:intron | 45.0% | |
| ! | AACCGTGGAATGTTGATGAG+TGG | - | chr1.2:1803283-1803302 | MS.gene24226:intron | 45.0% |
| ! | GATGAGAGATGACTCGGATA+AGG | - | chr1.2:1802560-1802579 | MS.gene24226:intron | 45.0% |
| ! | GGTGGTAATGTTGATGCTGT+TGG | - | chr1.2:1800560-1800579 | MS.gene24226:intron | 45.0% |
| ! | TGTCACTTAATATGGGACGG+AGG | + | chr1.2:1801064-1801083 | None:intergenic | 45.0% |
| ! | TTAGCTGATTTAGCACGACC+CGG | - | chr1.2:1802102-1802121 | MS.gene24226:CDS | 45.0% |
| ! | TTTGGTTCATGGTCAACCTG+GGG | - | chr1.2:1803134-1803153 | MS.gene24226:intron | 45.0% |
| ! | TTTTGTGCGTTGAGGTGTGT+TGG | + | chr1.2:1804259-1804278 | None:intergenic | 45.0% |
| !! | AGCGTTGATTTCCCAGCATT+TGG | + | chr1.2:1803622-1803641 | None:intergenic | 45.0% |
| !! | CTAGTGTTGCTTCTACGTGA+AGG | - | chr1.2:1800906-1800925 | MS.gene24226:intron | 45.0% |
| !! | CTTGATGGTGATCCCAACTT+GGG | - | chr1.2:1803718-1803737 | MS.gene24226:intron | 45.0% |
| !! | GTCTGCATCGTTTTTGCAGT+GGG | + | chr1.2:1804201-1804220 | None:intergenic | 45.0% |
| !! | TCTGCATCGTTTTTGCAGTG+GGG | + | chr1.2:1804200-1804219 | None:intergenic | 45.0% |
| !! | TGTCTGCATCGTTTTTGCAG+TGG | + | chr1.2:1804202-1804221 | None:intergenic | 45.0% |
| !!! | GTTTTGGTTCATGGTCAACC+TGG | - | chr1.2:1803132-1803151 | MS.gene24226:intron | 45.0% |
| AACAACATGGACCAGTAGCC+GGG | + | chr1.2:1803947-1803966 | None:intergenic | 50.0% | |
| AACAGAGCCTCCCATTTCAG+GGG | + | chr1.2:1804995-1805014 | None:intergenic | 50.0% | |
| ACCTGGGGAGGAAGTTAAGT+TGG | - | chr1.2:1803149-1803168 | MS.gene24226:intron | 50.0% | |
| ATACATCCCTGCTCCCAAGT+TGG | + | chr1.2:1803734-1803753 | None:intergenic | 50.0% | |
| ATCGGGTTTCGCAAGCGTAA+TGG | + | chr1.2:1803653-1803672 | None:intergenic | 50.0% | |
| CAACAACATGGACCAGTAGC+CGG | + | chr1.2:1803948-1803967 | None:intergenic | 50.0% | |
| CATCATTGCGGAGTCTAGTG+AGG | - | chr1.2:1804956-1804975 | MS.gene24226:intron | 50.0% | |
| CATTTAGCCCCTGAAATGGG+AGG | - | chr1.2:1804985-1805004 | MS.gene24226:intron | 50.0% | |
| CCAAATCTTGGACGCCTTGA+TGG | - | chr1.2:1803703-1803722 | MS.gene24226:intron | 50.0% | |
| CCAATAACAGAGTGAGGTCG+TGG | + | chr1.2:1805305-1805324 | None:intergenic | 50.0% | |
| CCACGACCTCACTCTGTTAT+TGG | - | chr1.2:1805302-1805321 | MS.gene24226:intron | 50.0% | |
| CTCACTAGACTCCGCAATGA+TGG | + | chr1.2:1804958-1804977 | None:intergenic | 50.0% | |
| GAAACAGAGCCTCCCATTTC+AGG | + | chr1.2:1804997-1805016 | None:intergenic | 50.0% | |
| GCTACATTGGCAGATTTGCC+TGG | - | chr1.2:1803763-1803782 | MS.gene24226:intron | 50.0% | |
| GGAAACTACATACCTCTGGC+AGG | + | chr1.2:1804854-1804873 | None:intergenic | 50.0% | |
| TACATCCCTGCTCCCAAGTT+GGG | + | chr1.2:1803733-1803752 | None:intergenic | 50.0% | |
| TCCAACTTAACTTCCTCCCC+AGG | + | chr1.2:1803153-1803172 | None:intergenic | 50.0% | |
| TGAGCCGAAACTTCAGAGCT+TGG | + | chr1.2:1805233-1805252 | None:intergenic | 50.0% | |
| TGCTGGGAAATCAACGCTTC+TGG | - | chr1.2:1803624-1803643 | MS.gene24226:intron | 50.0% | |
| ! | AGGAGATAAGGGCCGCTTTA+AGG | - | chr1.2:1805526-1805545 | MS.gene24226:CDS | 50.0% |
| ! | CCAAGTTGGGATCACCATCA+AGG | + | chr1.2:1803720-1803739 | None:intergenic | 50.0% |
| ! | CCATCAAGGCGTCCAAGATT+TGG | + | chr1.2:1803706-1803725 | None:intergenic | 50.0% |
| ! | TCATAGTACCCAGTCGGCTT+AGG | - | chr1.2:1805447-1805466 | MS.gene24226:CDS | 50.0% |
| ! | TGAGGCATCTAAGAAGGACC+CGG | - | chr1.2:1803926-1803945 | MS.gene24226:CDS | 50.0% |
| !! | AAGGCAGTGCGTTGATTCCA+AGG | - | chr1.2:1805545-1805564 | MS.gene24226:CDS | 50.0% |
| !! | AGAAGGTGCTCACTTGGGAA+AGG | - | chr1.2:1803792-1803811 | MS.gene24226:intron | 50.0% |
| !! | CCTTGATGGTGATCCCAACT+TGG | - | chr1.2:1803717-1803736 | MS.gene24226:intron | 50.0% |
| !! | CGTTGATTCCAAGGAACCGT+TGG | - | chr1.2:1805554-1805573 | MS.gene24226:CDS | 50.0% |
| AAAGGGAGGCTCAGTGCATG+AGG | - | chr1.2:1804929-1804948 | MS.gene24226:intron | 55.0% | |
| AAAGTAGACGCCATGTGGCG+AGG | + | chr1.2:1805041-1805060 | None:intergenic | 55.0% | |
| CTACGAGTTGTAGCCGACGT+TGG | - | chr1.2:1803180-1803199 | MS.gene24226:intron | 55.0% | |
| GAAGTTCTTGTTGCGAGGGG+TGG | - | chr1.2:1802129-1802148 | MS.gene24226:CDS | 55.0% | |
| GCATGAGGCTCCCATCATTG+CGG | - | chr1.2:1804944-1804963 | MS.gene24226:intron | 55.0% | |
| GTGATCCCAACTTGGGAGCA+GGG | - | chr1.2:1803725-1803744 | MS.gene24226:intron | 55.0% | |
| TCTAAGAAGGACCCGGCTAC+TGG | - | chr1.2:1803933-1803952 | MS.gene24226:CDS | 55.0% | |
| ! | AAGGGTGAGCTTTGGCGCAA+TGG | + | chr1.2:1805065-1805084 | None:intergenic | 55.0% |
| ! | CAACGTCGGCTACAACTCGT+AGG | + | chr1.2:1803182-1803201 | None:intergenic | 55.0% |
| CTTGTTGCGAGGGGTGGACA+AGG | - | chr1.2:1802135-1802154 | MS.gene24226:intron | 60.0% | |
| GGTGATCCCAACTTGGGAGC+AGG | - | chr1.2:1803724-1803743 | MS.gene24226:intron | 60.0% | |
| GGTTCATGGTCAACCTGGGG+AGG | - | chr1.2:1803137-1803156 | MS.gene24226:intron | 60.0% | |
| TTGCGAGGGGTGGACAAGGA+GGG | - | chr1.2:1802139-1802158 | MS.gene24226:intron | 60.0% | |
| CCATGTGGCGAGGTGGCCTT+GGG | + | chr1.2:1805031-1805050 | None:intergenic | 65.0% | |
| GTAGACGCCATGTGGCGAGG+TGG | + | chr1.2:1805038-1805057 | None:intergenic | 65.0% | |
| GTTGCGAGGGGTGGACAAGG+AGG | - | chr1.2:1802138-1802157 | MS.gene24226:intron | 65.0% | |
| TGCGAGGGGTGGACAAGGAG+GGG | - | chr1.2:1802140-1802159 | MS.gene24226:intron | 65.0% | |
| CCCAAGGCCACCTCGCCACA+TGG | - | chr1.2:1805028-1805047 | MS.gene24226:intron | 70.0% | |
| GCCATGTGGCGAGGTGGCCT+TGG | + | chr1.2:1805032-1805051 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 1800464 | 1805596 | 1800464 | ID=MS.gene24226 |
| chr1.2 | mRNA | 1800464 | 1805596 | 1800464 | ID=MS.gene24226.t1;Parent=MS.gene24226 |
| chr1.2 | exon | 1805413 | 1805596 | 1805413 | ID=MS.gene24226.t1.exon1;Parent=MS.gene24226.t1 |
| chr1.2 | CDS | 1805413 | 1805596 | 1805413 | ID=cds.MS.gene24226.t1;Parent=MS.gene24226.t1 |
| chr1.2 | exon | 1803899 | 1803990 | 1803899 | ID=MS.gene24226.t1.exon2;Parent=MS.gene24226.t1 |
| chr1.2 | CDS | 1803899 | 1803990 | 1803899 | ID=cds.MS.gene24226.t1;Parent=MS.gene24226.t1 |
| chr1.2 | exon | 1803479 | 1803562 | 1803479 | ID=MS.gene24226.t1.exon3;Parent=MS.gene24226.t1 |
| chr1.2 | CDS | 1803479 | 1803562 | 1803479 | ID=cds.MS.gene24226.t1;Parent=MS.gene24226.t1 |
| chr1.2 | exon | 1802851 | 1802928 | 1802851 | ID=MS.gene24226.t1.exon4;Parent=MS.gene24226.t1 |
| chr1.2 | CDS | 1802851 | 1802928 | 1802851 | ID=cds.MS.gene24226.t1;Parent=MS.gene24226.t1 |
| chr1.2 | exon | 1802247 | 1802447 | 1802247 | ID=MS.gene24226.t1.exon5;Parent=MS.gene24226.t1 |
| chr1.2 | CDS | 1802247 | 1802447 | 1802247 | ID=cds.MS.gene24226.t1;Parent=MS.gene24226.t1 |
| chr1.2 | exon | 1802046 | 1802153 | 1802046 | ID=MS.gene24226.t1.exon6;Parent=MS.gene24226.t1 |
| chr1.2 | CDS | 1802046 | 1802153 | 1802046 | ID=cds.MS.gene24226.t1;Parent=MS.gene24226.t1 |
| chr1.2 | exon | 1801200 | 1801274 | 1801200 | ID=MS.gene24226.t1.exon7;Parent=MS.gene24226.t1 |
| chr1.2 | CDS | 1801200 | 1801274 | 1801200 | ID=cds.MS.gene24226.t1;Parent=MS.gene24226.t1 |
| chr1.2 | exon | 1800724 | 1800905 | 1800724 | ID=MS.gene24226.t1.exon8;Parent=MS.gene24226.t1 |
| chr1.2 | CDS | 1800724 | 1800905 | 1800724 | ID=cds.MS.gene24226.t1;Parent=MS.gene24226.t1 |
| chr1.2 | exon | 1800464 | 1800563 | 1800464 | ID=MS.gene24226.t1.exon9;Parent=MS.gene24226.t1 |
| chr1.2 | CDS | 1800464 | 1800563 | 1800464 | ID=cds.MS.gene24226.t1;Parent=MS.gene24226.t1 |
| Gene Sequence |
| Protein sequence |
