Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28638.t1 | AES82275.2 | 99 | 409 | 4 | 0 | 1 | 409 | 1 | 409 | 1.50E-221 | 778.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28638.t1 | A7HTY3 | 49.9 | 353 | 172 | 2 | 51 | 403 | 2 | 349 | 4.7e-94 | 346.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28638.t1 | G7KUL3 | 99.0 | 409 | 4 | 0 | 1 | 409 | 1 | 409 | 1.1e-221 | 778.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049159 | MS.gene28638 | 0.811075 | 8.39E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene28638 | 0.815838 | 7.53E-52 | -1.69E-46 |
| MS.gene049647 | MS.gene28638 | 0.803723 | 3.04E-49 | -1.69E-46 |
| MS.gene050156 | MS.gene28638 | 0.800565 | 1.36E-48 | -1.69E-46 |
| MS.gene050227 | MS.gene28638 | 0.823919 | 1.07E-53 | -1.69E-46 |
| MS.gene050228 | MS.gene28638 | 0.815807 | 7.65E-52 | -1.69E-46 |
| MS.gene050303 | MS.gene28638 | 0.804906 | 1.72E-49 | -1.69E-46 |
| MS.gene050442 | MS.gene28638 | 0.809137 | 2.20E-50 | -1.69E-46 |
| MS.gene050719 | MS.gene28638 | 0.839784 | 1.29E-57 | -1.69E-46 |
| MS.gene050721 | MS.gene28638 | 0.841855 | 3.69E-58 | -1.69E-46 |
| MS.gene050724 | MS.gene28638 | 0.838983 | 2.08E-57 | -1.69E-46 |
| MS.gene050815 | MS.gene28638 | 0.814331 | 1.63E-51 | -1.69E-46 |
| MS.gene050820 | MS.gene28638 | 0.802394 | 5.73E-49 | -1.69E-46 |
| MS.gene050824 | MS.gene28638 | 0.822639 | 2.13E-53 | -1.69E-46 |
| MS.gene050844 | MS.gene28638 | 0.89825 | 6.38E-77 | -1.69E-46 |
| MS.gene051247 | MS.gene28638 | 0.802155 | 6.41E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene28638 | 0.838012 | 3.70E-57 | -1.69E-46 |
| MS.gene052190 | MS.gene28638 | 0.805088 | 1.58E-49 | -1.69E-46 |
| MS.gene052323 | MS.gene28638 | 0.810923 | 9.05E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene28638 | 0.800089 | 1.70E-48 | -1.69E-46 |
| MS.gene052773 | MS.gene28638 | 0.802495 | 5.46E-49 | -1.69E-46 |
| MS.gene052863 | MS.gene28638 | 0.83058 | 2.71E-55 | -1.69E-46 |
| MS.gene052896 | MS.gene28638 | 0.824583 | 7.46E-54 | -1.69E-46 |
| MS.gene053008 | MS.gene28638 | 0.819534 | 1.10E-52 | -1.69E-46 |
| MS.gene053221 | MS.gene28638 | 0.801291 | 9.65E-49 | -1.69E-46 |
| MS.gene054472 | MS.gene28638 | 0.845014 | 5.29E-59 | -1.69E-46 |
| MS.gene05468 | MS.gene28638 | 0.805381 | 1.37E-49 | -1.69E-46 |
| MS.gene05510 | MS.gene28638 | 0.801192 | 1.01E-48 | -1.69E-46 |
| MS.gene055623 | MS.gene28638 | 0.82798 | 1.16E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene28638 | 0.849981 | 2.28E-60 | -1.69E-46 |
| MS.gene056173 | MS.gene28638 | 0.824152 | 9.42E-54 | -1.69E-46 |
| MS.gene056373 | MS.gene28638 | 0.810031 | 1.41E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene28638 | 0.820878 | 5.44E-53 | -1.69E-46 |
| MS.gene057026 | MS.gene28638 | 0.837269 | 5.74E-57 | -1.69E-46 |
| MS.gene057140 | MS.gene28638 | 0.81715 | 3.83E-52 | -1.69E-46 |
| MS.gene058399 | MS.gene28638 | 0.805558 | 1.26E-49 | -1.69E-46 |
| MS.gene058636 | MS.gene28638 | 0.810057 | 1.39E-50 | -1.69E-46 |
| MS.gene058792 | MS.gene28638 | 0.820041 | 8.46E-53 | -1.69E-46 |
| MS.gene058906 | MS.gene28638 | 0.819214 | 1.31E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene28638 | 0.812472 | 4.17E-51 | -1.69E-46 |
| MS.gene059249 | MS.gene28638 | 0.808943 | 2.42E-50 | -1.69E-46 |
| MS.gene059789 | MS.gene28638 | 0.831817 | 1.35E-55 | -1.69E-46 |
| MS.gene059842 | MS.gene28638 | 0.803135 | 4.03E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene28638 | 0.831603 | 1.52E-55 | -1.69E-46 |
| MS.gene060572 | MS.gene28638 | 0.854284 | 1.36E-61 | -1.69E-46 |
| MS.gene060637 | MS.gene28638 | 0.807603 | 4.66E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene28638 | 0.825511 | 4.50E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene28638 | 0.821519 | 3.87E-53 | -1.69E-46 |
| MS.gene060803 | MS.gene28638 | 0.816122 | 6.51E-52 | -1.69E-46 |
| MS.gene060998 | MS.gene28638 | 0.80692 | 6.51E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene071613 | MS.gene28638 | PPI |
| MS.gene28638 | MS.gene23002 | PPI |
| MS.gene024059 | MS.gene28638 | PPI |
| MS.gene033500 | MS.gene28638 | PPI |
| MS.gene52600 | MS.gene28638 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28638.t1 | MTR_7g110570 | 99.022 | 409 | 4 | 0 | 1 | 409 | 1 | 409 | 0.0 | 840 |
| MS.gene28638.t1 | MTR_7g110570 | 97.555 | 409 | 4 | 1 | 1 | 409 | 1 | 403 | 0.0 | 821 |
| MS.gene28638.t1 | MTR_7g108300 | 41.584 | 303 | 173 | 1 | 68 | 370 | 76 | 374 | 8.26e-76 | 241 |
| MS.gene28638.t1 | MTR_7g112100 | 36.593 | 317 | 181 | 9 | 100 | 401 | 164 | 475 | 4.34e-50 | 176 |
| MS.gene28638.t1 | MTR_7g080430 | 31.161 | 353 | 222 | 8 | 49 | 394 | 123 | 461 | 1.59e-39 | 147 |
| MS.gene28638.t1 | MTR_1g041890 | 27.419 | 310 | 205 | 7 | 82 | 383 | 237 | 534 | 3.31e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28638.t1 | AT2G47020 | 74.801 | 377 | 95 | 0 | 33 | 409 | 37 | 413 | 0.0 | 591 |
| MS.gene28638.t1 | AT2G47020 | 70.223 | 403 | 94 | 1 | 33 | 409 | 37 | 439 | 0.0 | 579 |
| MS.gene28638.t1 | AT2G47020 | 76.923 | 338 | 78 | 0 | 72 | 409 | 11 | 348 | 0.0 | 542 |
| MS.gene28638.t1 | AT2G47020 | 72.954 | 281 | 76 | 0 | 33 | 313 | 37 | 317 | 1.20e-149 | 427 |
| MS.gene28638.t1 | AT2G47020 | 71.368 | 234 | 67 | 0 | 33 | 266 | 37 | 270 | 2.73e-116 | 340 |
| MS.gene28638.t1 | AT3G62910 | 40.867 | 323 | 175 | 3 | 75 | 394 | 82 | 391 | 2.80e-81 | 256 |
| MS.gene28638.t1 | AT1G56350 | 36.093 | 302 | 176 | 7 | 106 | 394 | 174 | 471 | 2.23e-48 | 171 |
| MS.gene28638.t1 | AT5G36170 | 33.013 | 312 | 189 | 7 | 97 | 394 | 136 | 441 | 2.07e-38 | 144 |
| MS.gene28638.t1 | AT5G36170 | 33.013 | 312 | 189 | 7 | 97 | 394 | 137 | 442 | 2.55e-38 | 144 |
| MS.gene28638.t1 | AT5G36170 | 31.696 | 224 | 136 | 4 | 97 | 307 | 137 | 356 | 6.39e-26 | 108 |
| MS.gene28638.t1 | AT5G36170 | 31.696 | 224 | 136 | 4 | 97 | 307 | 136 | 355 | 6.89e-26 | 108 |
Find 71 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTCTCACTTCCGAATTTC+CGG | 0.193573 | 7.2:-4823890 | MS.gene28638:CDS |
| TACTCTGACTGCGACGTTTC+TGG | 0.196778 | 7.2:+4823564 | None:intergenic |
| AACAGATCCGGTGATATTTC+AGG | 0.234503 | 7.2:+4823758 | None:intergenic |
| CAGTTTCCTTTCTTCCTCTA+TGG | 0.235024 | 7.2:+4822417 | None:intergenic |
| TTCTATAGATCCGGTGGTTC+AGG | 0.263634 | 7.2:-4821147 | MS.gene28638:CDS |
| ACCGGATCTGTTAAATATAA+TGG | 0.276498 | 7.2:-4823747 | MS.gene28638:CDS |
| CGGTTTCGTCTTTACTCTTC+CGG | 0.293909 | 7.2:-4823870 | MS.gene28638:intron |
| TCTTGATAATCTTATTAATC+AGG | 0.302774 | 7.2:-4823687 | MS.gene28638:intron |
| AGACAAAGACATGCTAAATA+TGG | 0.324341 | 7.2:-4822461 | MS.gene28638:CDS |
| TAAAGACGAAACCGGAAATT+CGG | 0.355429 | 7.2:+4823879 | None:intergenic |
| TGCAGGCACTGGTGGGGAGG+AGG | 0.376498 | 7.2:-4822145 | MS.gene28638:intron |
| GTTCAAAATTACCTTCTGTT+TGG | 0.381411 | 7.2:+4823476 | None:intergenic |
| TCCTTTCTTCCTCTATGGCC+TGG | 0.384019 | 7.2:+4822422 | None:intergenic |
| TACCATCTGCAGGAAATTGA+TGG | 0.386920 | 7.2:-4822514 | MS.gene28638:intron |
| TGATGAAAGAGATTGCATTT+TGG | 0.392141 | 7.2:-4822353 | MS.gene28638:CDS |
| TCCATTATATTTAACAGATC+CGG | 0.397333 | 7.2:+4823746 | None:intergenic |
| AGAATGACTCACATTCCAAC+TGG | 0.414670 | 7.2:-4821090 | MS.gene28638:CDS |
| AAAATTGATTTCTATAGATC+CGG | 0.417665 | 7.2:-4821156 | MS.gene28638:CDS |
| GAGGCTACTGCAGCTATTGT+AGG | 0.422228 | 7.2:-4821705 | MS.gene28638:CDS |
| CTTTCATCAGCATCATCCTT+AGG | 0.423814 | 7.2:+4822367 | None:intergenic |
| TCTTCTTCTTAAAGAAGAAA+TGG | 0.429187 | 7.2:-4820062 | MS.gene28638:CDS |
| GCAACTTATTAATCAATTGA+AGG | 0.431077 | 7.2:-4823499 | MS.gene28638:CDS |
| ACACAGTACCTTGAGAGCTT+TGG | 0.439461 | 7.2:+4820391 | None:intergenic |
| ATCTGATATGAAGGGATTCA+AGG | 0.449262 | 7.2:-4821950 | MS.gene28638:intron |
| CATATTGTACAGATCGGTAG+TGG | 0.453978 | 7.2:-4820214 | MS.gene28638:intron |
| TATAGCTCAATCTGATATGA+AGG | 0.454121 | 7.2:-4821959 | MS.gene28638:CDS |
| CTTGAGGAAAGTTGTATGTT+CGG | 0.461744 | 7.2:+4820173 | None:intergenic |
| TTCCGTTGCAATTCTCCCAC+AGG | 0.466385 | 7.2:-4821506 | MS.gene28638:CDS |
| TGATCGACTACTATGAAGTC+TGG | 0.475682 | 7.2:+4820343 | None:intergenic |
| AGATGAGCGTTCTCAGCATA+TGG | 0.481437 | 7.2:-4821049 | MS.gene28638:intron |
| GAAATTCGGAAGTGAGAGTT+CGG | 0.492224 | 7.2:+4823893 | None:intergenic |
| GCTGAAGTCATTACTTCCTA+AGG | 0.497967 | 7.2:-4822383 | MS.gene28638:CDS |
| GCCAGGCCATAGAGGAAGAA+AGG | 0.502842 | 7.2:-4822423 | MS.gene28638:CDS |
| AGTATGCTCACAACAAAGGC+TGG | 0.515594 | 7.2:-4821999 | MS.gene28638:CDS |
| GAATAAAGCCAAAGCTCTCA+AGG | 0.523351 | 7.2:-4820399 | MS.gene28638:CDS |
| GATTCTCTGCTATTAAGCAC+AGG | 0.526234 | 7.2:-4823718 | MS.gene28638:CDS |
| AGAGTATGCAAGAGCTAACA+AGG | 0.527690 | 7.2:-4823547 | MS.gene28638:CDS |
| GGCAACAGAGGAAATGAGCC+AGG | 0.537076 | 7.2:-4822440 | MS.gene28638:CDS |
| GGAAATGAGCCAGGCCATAG+AGG | 0.537832 | 7.2:-4822431 | MS.gene28638:CDS |
| ATGCTGACCACCTGAACCAC+CGG | 0.538846 | 7.2:+4821137 | None:intergenic |
| ACTGCAGCTATTGTAGGAGT+TGG | 0.539895 | 7.2:-4821699 | MS.gene28638:CDS |
| CGGAAGAGTAAAGACGAAAC+CGG | 0.540382 | 7.2:+4823871 | None:intergenic |
| GAGTGGAATTCATAGAGTAC+AGG | 0.544385 | 7.2:-4821652 | MS.gene28638:intron |
| GGGAAACTAAAATTTGAGAG+TGG | 0.547551 | 7.2:-4821669 | MS.gene28638:CDS |
| ATCAAAGCTTCGATCAGAGC+AGG | 0.548817 | 7.2:-4820324 | MS.gene28638:intron |
| TAATTACCTCATCAGCCTGT+GGG | 0.550923 | 7.2:+4821491 | None:intergenic |
| AAGAAGAAGAGCATCAATGA+AGG | 0.557042 | 7.2:+4820075 | None:intergenic |
| CGTGTAACTGATCATAGAGT+TGG | 0.576242 | 7.2:-4820148 | MS.gene28638:CDS |
| AAAGATATTCATTGCAAACA+AGG | 0.584561 | 7.2:+4822119 | None:intergenic |
| TCAATTGAAGGCCAAACAGA+AGG | 0.589477 | 7.2:-4823487 | MS.gene28638:intron |
| AATTGCAACGGAAACAGCAC+TGG | 0.594367 | 7.2:+4821516 | None:intergenic |
| TTAATTACCTCATCAGCCTG+TGG | 0.596975 | 7.2:+4821490 | None:intergenic |
| AACATAGACGATGTGATGCA+AGG | 0.597991 | 7.2:-4820112 | MS.gene28638:CDS |
| CATGCTAAATATGGCAACAG+AGG | 0.599188 | 7.2:-4822452 | MS.gene28638:CDS |
| TATAGATCCGGTGGTTCAGG+TGG | 0.600047 | 7.2:-4821144 | MS.gene28638:CDS |
| ATATTGTACAGATCGGTAGT+GGG | 0.607392 | 7.2:-4820213 | MS.gene28638:intron |
| AATTCTCCCACAGGCTGATG+AGG | 0.609271 | 7.2:-4821497 | MS.gene28638:intron |
| ATAGCAATCACGATCCCAGT+TGG | 0.611104 | 7.2:+4821075 | None:intergenic |
| ATTGATTTCTATAGATCCGG+TGG | 0.614792 | 7.2:-4821153 | MS.gene28638:CDS |
| ATAGCTCAATCTGATATGAA+GGG | 0.616699 | 7.2:-4821958 | MS.gene28638:CDS |
| AGCCTGTGGGAGAATTGCAA+CGG | 0.624639 | 7.2:+4821504 | None:intergenic |
| AGTGGAACCTGAAATATCAC+CGG | 0.627145 | 7.2:-4823765 | MS.gene28638:CDS |
| TGATCAGTTACACGGCCTTG+AGG | 0.631260 | 7.2:+4820157 | None:intergenic |
| CAACTCTATGATCAGTTACA+CGG | 0.632031 | 7.2:+4820149 | None:intergenic |
| CGAACATACAACTTTCCTCA+AGG | 0.648494 | 7.2:-4820172 | MS.gene28638:CDS |
| ATTCTCTGCTATTAAGCACA+GGG | 0.649059 | 7.2:-4823717 | MS.gene28638:CDS |
| GAGAAGTATGCTCACAACAA+AGG | 0.658749 | 7.2:-4822003 | MS.gene28638:CDS |
| GAATGACTCACATTCCAACT+GGG | 0.661685 | 7.2:-4821089 | MS.gene28638:CDS |
| CAAAGGCTGGAAGTTTGATG+TGG | 0.672649 | 7.2:-4821986 | MS.gene28638:CDS |
| TATTGTACAGATCGGTAGTG+GGG | 0.675160 | 7.2:-4820212 | MS.gene28638:intron |
| AAGGAGCTTCGAAAGCTCAG+TGG | 0.714146 | 7.2:-4823528 | MS.gene28638:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAGTAAAAGAATA+AGG | - | chr7.2:4821419-4821438 | MS.gene28638:intron | 10.0% |
| !!! | ATTTTATAATAATGATTCAA+TGG | - | chr7.2:4820349-4820368 | MS.gene28638:CDS | 10.0% |
| !! | ATTGTATAAACAAATGAAAA+TGG | + | chr7.2:4821826-4821845 | None:intergenic | 15.0% |
| !! | TAAATTTATCCTTCATATAA+GGG | - | chr7.2:4820915-4820934 | MS.gene28638:intron | 15.0% |
| !! | TTGTATAAACAAATGAAAAT+GGG | + | chr7.2:4821825-4821844 | None:intergenic | 15.0% |
| !!! | AAACTTTAGAAGTTAAATTT+AGG | - | chr7.2:4821259-4821278 | MS.gene28638:intron | 15.0% |
| !!! | ATAAATAGATTGATTCAAAT+CGG | + | chr7.2:4820156-4820175 | None:intergenic | 15.0% |
| !!! | GATTTATTTACTATGTATTT+TGG | - | chr7.2:4821195-4821214 | MS.gene28638:intron | 15.0% |
| !!! | TCTTTATTTTATCACTATTT+TGG | + | chr7.2:4822623-4822642 | None:intergenic | 15.0% |
| !! | AAATAAGAGAAATATAGAAC+AGG | + | chr7.2:4823524-4823543 | None:intergenic | 20.0% |
| !! | AAATTTATCCTTCATATAAG+GGG | - | chr7.2:4820916-4820935 | MS.gene28638:intron | 20.0% |
| !! | AATAAGAGAAATATAGAACA+GGG | + | chr7.2:4823523-4823542 | None:intergenic | 20.0% |
| !! | ACATAGTAAATAAATCACAT+AGG | + | chr7.2:4821191-4821210 | None:intergenic | 20.0% |
| !! | CTAAATTTATCCTTCATATA+AGG | - | chr7.2:4820914-4820933 | MS.gene28638:intron | 20.0% |
| !! | GATTGTAAAAGATATTAAAC+AGG | + | chr7.2:4822733-4822752 | None:intergenic | 20.0% |
| !! | GTAATTAATAAATACCCTTA+TGG | - | chr7.2:4822518-4822537 | MS.gene28638:intron | 20.0% |
| !! | TGAATCTTATATTATGTTCA+TGG | - | chr7.2:4822773-4822792 | MS.gene28638:intron | 20.0% |
| !! | TTTGTTAAACATATATGCTT+AGG | + | chr7.2:4820989-4821008 | None:intergenic | 20.0% |
| !!! | AAAATTGATTTCTATAGATC+CGG | - | chr7.2:4822837-4822856 | MS.gene28638:intron | 20.0% |
| !!! | AATAATTTTGATAACAGAAG+TGG | - | chr7.2:4820210-4820229 | MS.gene28638:intron | 20.0% |
| !!! | ATGAATATCTTTAAGATGTA+AGG | - | chr7.2:4821885-4821904 | MS.gene28638:intron | 20.0% |
| !!! | ATTTGTTTATACAATTTTGC+AGG | - | chr7.2:4821831-4821850 | MS.gene28638:intron | 20.0% |
| !!! | TCTTGATAATCTTATTAATC+AGG | - | chr7.2:4820306-4820325 | MS.gene28638:intron | 20.0% |
| !!! | TTAAAATTGAAAGTATTGTG+TGG | - | chr7.2:4820868-4820887 | MS.gene28638:intron | 20.0% |
| ! | AAAGATATTCATTGCAAACA+AGG | + | chr7.2:4821877-4821896 | None:intergenic | 25.0% |
| ! | AAGTTTCATATTGTACAGAT+CGG | - | chr7.2:4823773-4823792 | MS.gene28638:intron | 25.0% |
| ! | AATTTATCCTTCATATAAGG+GGG | - | chr7.2:4820917-4820936 | MS.gene28638:intron | 25.0% |
| ! | ATGATATTCAGCTAATGATT+TGG | - | chr7.2:4820778-4820797 | MS.gene28638:intron | 25.0% |
| ! | ATTCTTCAACAGAAAATAAG+TGG | + | chr7.2:4820834-4820853 | None:intergenic | 25.0% |
| ! | CTTAATGGAAAATAACCTAA+CGG | + | chr7.2:4823398-4823417 | None:intergenic | 25.0% |
| ! | GAAGTTAAATTTAGGCAATT+AGG | - | chr7.2:4821267-4821286 | MS.gene28638:intron | 25.0% |
| ! | GCAACTTATTAATCAATTGA+AGG | - | chr7.2:4820494-4820513 | MS.gene28638:intron | 25.0% |
| ! | GTCAAGTAAAAAAAAAACGA+TGG | + | chr7.2:4822255-4822274 | None:intergenic | 25.0% |
| ! | TAAATTATCACTGTTGAAGA+TGG | - | chr7.2:4821676-4821695 | MS.gene28638:CDS | 25.0% |
| ! | TAAGGTTACACTTTATACTT+GGG | - | chr7.2:4821903-4821922 | MS.gene28638:intron | 25.0% |
| ! | TAATGACATGAACTTACTAA+TGG | - | chr7.2:4823228-4823247 | MS.gene28638:intron | 25.0% |
| ! | TATGGTAAATGATTCCAAAA+TGG | - | chr7.2:4822962-4822981 | MS.gene28638:intron | 25.0% |
| ! | TCATTTACTCAAATGATTAC+TGG | + | chr7.2:4820591-4820610 | None:intergenic | 25.0% |
| ! | TCCATTATATTTAACAGATC+CGG | + | chr7.2:4820250-4820269 | None:intergenic | 25.0% |
| ! | TCTTCTTCTTAAAGAAGAAA+TGG | - | chr7.2:4823931-4823950 | MS.gene28638:CDS | 25.0% |
| !! | ACTAACTCCATAAACATTTT+CGG | - | chr7.2:4823072-4823091 | MS.gene28638:intron | 25.0% |
| !! | ATGGGAATAAAAAAAAGTGT+AGG | + | chr7.2:4821807-4821826 | None:intergenic | 25.0% |
| !! | ATTGAAGGTGTACATAATAT+TGG | - | chr7.2:4821233-4821252 | MS.gene28638:intron | 25.0% |
| !! | TGGGAATAAAAAAAAGTGTA+GGG | + | chr7.2:4821806-4821825 | None:intergenic | 25.0% |
| !!! | AGTTCTAGAAATAAGATTGA+AGG | - | chr7.2:4821218-4821237 | MS.gene28638:intron | 25.0% |
| !!! | ATTTTTTTTCTGTCTTTAGG+TGG | - | chr7.2:4821145-4821164 | MS.gene28638:CDS | 25.0% |
| AAAAAAGCAAAACGATCAAC+AGG | + | chr7.2:4821765-4821784 | None:intergenic | 30.0% | |
| AAAATGTTGTGTAAGTGTCT+TGG | - | chr7.2:4820709-4820728 | MS.gene28638:intron | 30.0% | |
| AAATGTTGTGTAAGTGTCTT+GGG | - | chr7.2:4820710-4820729 | MS.gene28638:intron | 30.0% | |
| AAGAAAAGAAGGGGAAAAAA+AGG | + | chr7.2:4823741-4823760 | None:intergenic | 30.0% | |
| AAGACAGAAAAAAAATGCCA+TGG | + | chr7.2:4821141-4821160 | None:intergenic | 30.0% | |
| AATGTTTATGGAGTTAGTTG+TGG | + | chr7.2:4823070-4823089 | None:intergenic | 30.0% | |
| ACCGGATCTGTTAAATATAA+TGG | - | chr7.2:4820246-4820265 | MS.gene28638:intron | 30.0% | |
| ACGATGGTAAACACTATAAA+CGG | + | chr7.2:4822174-4822193 | None:intergenic | 30.0% | |
| AGACAAAGACATGCTAAATA+TGG | - | chr7.2:4821532-4821551 | MS.gene28638:CDS | 30.0% | |
| AGATAGAAGTTGCATTTGTA+TGG | + | chr7.2:4822658-4822677 | None:intergenic | 30.0% | |
| ATAGCTCAATCTGATATGAA+GGG | - | chr7.2:4822035-4822054 | MS.gene28638:intron | 30.0% | |
| ATTTATCCTTCATATAAGGG+GGG | - | chr7.2:4820918-4820937 | MS.gene28638:intron | 30.0% | |
| CAAAATAATAAAGTCATCGC+AGG | + | chr7.2:4823496-4823515 | None:intergenic | 30.0% | |
| CTGAAACAACATATGCTTAA+TGG | + | chr7.2:4823413-4823432 | None:intergenic | 30.0% | |
| CTTTACCAAAATAAGATAGC+CGG | + | chr7.2:4820809-4820828 | None:intergenic | 30.0% | |
| GACACATGGTTATTACTAAT+GGG | - | chr7.2:4823171-4823190 | MS.gene28638:intron | 30.0% | |
| GATACTATCTTGCAAAATGT+AGG | - | chr7.2:4821964-4821983 | MS.gene28638:CDS | 30.0% | |
| GATAGAAGTTGCATTTGTAT+GGG | + | chr7.2:4822657-4822676 | None:intergenic | 30.0% | |
| GTAAGGTTACACTTTATACT+TGG | - | chr7.2:4821902-4821921 | MS.gene28638:intron | 30.0% | |
| GTTCAAAATTACCTTCTGTT+TGG | + | chr7.2:4820520-4820539 | None:intergenic | 30.0% | |
| TAGTAAAAGAATAAGGCTGT+CGG | - | chr7.2:4821426-4821445 | MS.gene28638:intron | 30.0% | |
| TATAGCTCAATCTGATATGA+AGG | - | chr7.2:4822034-4822053 | MS.gene28638:intron | 30.0% | |
| TGACACATGGTTATTACTAA+TGG | - | chr7.2:4823170-4823189 | MS.gene28638:intron | 30.0% | |
| TGCTACAGACTACAAAAAAA+CGG | + | chr7.2:4822225-4822244 | None:intergenic | 30.0% | |
| TTTGTGTTCATTCATATGTG+TGG | - | chr7.2:4823299-4823318 | MS.gene28638:intron | 30.0% | |
| ! | CTGCGATGACTTTATTATTT+TGG | - | chr7.2:4823494-4823513 | MS.gene28638:CDS | 30.0% |
| ! | GGTAATTTTGAACAGTGAAA+TGG | - | chr7.2:4820527-4820546 | MS.gene28638:intron | 30.0% |
| ! | TGATGAAAGAGATTGCATTT+TGG | - | chr7.2:4821640-4821659 | MS.gene28638:intron | 30.0% |
| ! | TTGACTGTAATCACATGTTT+TGG | - | chr7.2:4820620-4820639 | MS.gene28638:intron | 30.0% |
| !!! | ACATGTAAATTGTGCCATTT+TGG | + | chr7.2:4822979-4822998 | None:intergenic | 30.0% |
| !!! | GGCATTTTTTTTCTGTCTTT+AGG | - | chr7.2:4821142-4821161 | MS.gene28638:CDS | 30.0% |
| !!! | GGCTATCTTATTTTGGTAAA+GGG | - | chr7.2:4820808-4820827 | MS.gene28638:intron | 30.0% |
| AAAATTCTGTGTACACGGAT+AGG | - | chr7.2:4823342-4823361 | MS.gene28638:intron | 35.0% | |
| AAATGCCTCTTGCAATATCT+TGG | + | chr7.2:4823440-4823459 | None:intergenic | 35.0% | |
| AATTTAGGCAATTAGGCTGT+CGG | - | chr7.2:4821274-4821293 | MS.gene28638:intron | 35.0% | |
| ACAAGGCATATTGTTCCATA+AGG | + | chr7.2:4822536-4822555 | None:intergenic | 35.0% | |
| AGCAGAAATTTGAAAGCAGA+GGG | + | chr7.2:4823572-4823591 | None:intergenic | 35.0% | |
| AGGCATTTGACATAGTTGAT+GGG | - | chr7.2:4823452-4823471 | MS.gene28638:intron | 35.0% | |
| AGTAAAAGAATAAGGCTGTC+GGG | - | chr7.2:4821427-4821446 | MS.gene28638:intron | 35.0% | |
| AGTCAATCCAGAAGAAAAGA+AGG | + | chr7.2:4823752-4823771 | None:intergenic | 35.0% | |
| ATATTGTACAGATCGGTAGT+GGG | - | chr7.2:4823780-4823799 | MS.gene28638:intron | 35.0% | |
| ATCTGATATGAAGGGATTCA+AGG | - | chr7.2:4822043-4822062 | MS.gene28638:intron | 35.0% | |
| ATGCAACTTCTATCTTTCTG+TGG | - | chr7.2:4822663-4822682 | MS.gene28638:intron | 35.0% | |
| ATTCGTAGATTTGATGTGAG+AGG | + | chr7.2:4822379-4822398 | None:intergenic | 35.0% | |
| ATTCTCTGCTATTAAGCACA+GGG | - | chr7.2:4820276-4820295 | MS.gene28638:intron | 35.0% | |
| CAACTCTATGATCAGTTACA+CGG | + | chr7.2:4823847-4823866 | None:intergenic | 35.0% | |
| CAAGGCATATTGTTCCATAA+GGG | + | chr7.2:4822535-4822554 | None:intergenic | 35.0% | |
| CCATGTCATGAACTAAATCT+TGG | + | chr7.2:4821052-4821071 | None:intergenic | 35.0% | |
| CTTACAATGCCGAAATTGTT+AGG | - | chr7.2:4821312-4821331 | MS.gene28638:intron | 35.0% | |
| CTTGAGGAAAGTTGTATGTT+CGG | + | chr7.2:4823823-4823842 | None:intergenic | 35.0% | |
| GACATGAACTTACTAATGGA+AGG | - | chr7.2:4823232-4823251 | MS.gene28638:intron | 35.0% | |
| GACATGAATCATTTACCGTT+AGG | - | chr7.2:4823380-4823399 | MS.gene28638:intron | 35.0% | |
| GATTCAAATCGGAAAGTTAC+CGG | + | chr7.2:4820145-4820164 | None:intergenic | 35.0% | |
| GGAGATACCGAAAATGTTTA+TGG | + | chr7.2:4823082-4823101 | None:intergenic | 35.0% | |
| GGGAAACTAAAATTTGAGAG+TGG | - | chr7.2:4822324-4822343 | MS.gene28638:intron | 35.0% | |
| GGTGAACACAAAAATAAAGC+AGG | + | chr7.2:4820968-4820987 | None:intergenic | 35.0% | |
| GGTTGACGTTCAGTTAAAAA+AGG | - | chr7.2:4822806-4822825 | MS.gene28638:intron | 35.0% | |
| GTCAATCCAGAAGAAAAGAA+GGG | + | chr7.2:4823751-4823770 | None:intergenic | 35.0% | |
| TAAAGACGAAACCGGAAATT+CGG | + | chr7.2:4820117-4820136 | None:intergenic | 35.0% | |
| TATCTTTCTGTGGTTTCCTT+TGG | - | chr7.2:4822673-4822692 | MS.gene28638:intron | 35.0% | |
| TCAATCCAGAAGAAAAGAAG+GGG | + | chr7.2:4823750-4823769 | None:intergenic | 35.0% | |
| TCTTGAATATCACGTGATAC+AGG | - | chr7.2:4821452-4821471 | MS.gene28638:intron | 35.0% | |
| TGATGAATGGAATTGCAAAG+AGG | - | chr7.2:4822707-4822726 | MS.gene28638:intron | 35.0% | |
| TGGTAAACACTATAAACGGA+AGG | + | chr7.2:4822170-4822189 | None:intergenic | 35.0% | |
| TGTGTGGCTTAAGTTTAGAT+TGG | - | chr7.2:4820884-4820903 | MS.gene28638:intron | 35.0% | |
| TTACTTGACCTCAATTTCTC+AGG | - | chr7.2:4822266-4822285 | MS.gene28638:intron | 35.0% | |
| TTGTAGCACTACTAATAACG+TGG | + | chr7.2:4823103-4823122 | None:intergenic | 35.0% | |
| ! | ATGAACACGTCCCAATTTTT+CGG | + | chr7.2:4822456-4822475 | None:intergenic | 35.0% |
| ! | ATTGATTTCTATAGATCCGG+TGG | - | chr7.2:4822840-4822859 | MS.gene28638:intron | 35.0% |
| ! | CATTCAAGTTTCAGATCACA+AGG | + | chr7.2:4822553-4822572 | None:intergenic | 35.0% |
| ! | CCAAGATTTAGTTCATGACA+TGG | - | chr7.2:4821049-4821068 | MS.gene28638:intron | 35.0% |
| ! | TGAAAGAGATTGCATTTTGG+AGG | - | chr7.2:4821643-4821662 | MS.gene28638:intron | 35.0% |
| ! | TTATACAATTTTGCAGGCAC+TGG | - | chr7.2:4821837-4821856 | MS.gene28638:intron | 35.0% |
| ! | TTTTTCCCCTTCTTTTCTTC+TGG | - | chr7.2:4823742-4823761 | MS.gene28638:CDS | 35.0% |
| !! | AAGAAGAAGAGCATCAATGA+AGG | + | chr7.2:4823921-4823940 | None:intergenic | 35.0% |
| !! | ATGACCTGTTTTTCAGTATG+TGG | - | chr7.2:4822089-4822108 | MS.gene28638:intron | 35.0% |
| !!! | ATTGTAGGAGTTGGTGTTTT+TGG | - | chr7.2:4822303-4822322 | MS.gene28638:intron | 35.0% |
| !!! | CACAGAATTTTGAGGCTAAA+TGG | + | chr7.2:4823333-4823352 | None:intergenic | 35.0% |
| !!! | CGGCTATCTTATTTTGGTAA+AGG | - | chr7.2:4820807-4820826 | MS.gene28638:intron | 35.0% |
| !!! | TTGTAGGAGTTGGTGTTTTT+GGG | - | chr7.2:4822304-4822323 | MS.gene28638:intron | 35.0% |
| !!! | TTTTTTGTCTGTAGACGAAG+TGG | + | chr7.2:4821404-4821423 | None:intergenic | 35.0% |
| AACAGATCCGGTGATATTTC+AGG | + | chr7.2:4820238-4820257 | None:intergenic | 40.0% | |
| AACAGCCTGTTTCAACAAAG+TGG | + | chr7.2:4821108-4821127 | None:intergenic | 40.0% | |
| AACATAGACGATGTGATGCA+AGG | - | chr7.2:4823881-4823900 | MS.gene28638:CDS | 40.0% | |
| AACTCTCACTTCCGAATTTC+CGG | - | chr7.2:4820103-4820122 | MS.gene28638:CDS | 40.0% | |
| AATTTCTGCCAGCTTGTCTT+AGG | - | chr7.2:4821738-4821757 | MS.gene28638:intron | 40.0% | |
| ACAGCCACATACTGAAAAAC+AGG | + | chr7.2:4822096-4822115 | None:intergenic | 40.0% | |
| ACTGAACGTCAACCTACAAA+TGG | + | chr7.2:4822800-4822819 | None:intergenic | 40.0% | |
| AGAATGACTCACATTCCAAC+TGG | - | chr7.2:4822903-4822922 | MS.gene28638:intron | 40.0% | |
| AGAGTATGCAAGAGCTAACA+AGG | - | chr7.2:4820446-4820465 | MS.gene28638:intron | 40.0% | |
| AGTGGAACCTGAAATATCAC+CGG | - | chr7.2:4820228-4820247 | MS.gene28638:intron | 40.0% | |
| CAAACGGAAGGAAAAAACGA+TGG | + | chr7.2:4822190-4822209 | None:intergenic | 40.0% | |
| CAACTCCACTTTGTTGAAAC+AGG | - | chr7.2:4821100-4821119 | MS.gene28638:CDS | 40.0% | |
| CAATGCCGAAATTGTTAGGT+TGG | - | chr7.2:4821316-4821335 | MS.gene28638:intron | 40.0% | |
| CACACACTTAAAGTGACACA+TGG | - | chr7.2:4823157-4823176 | MS.gene28638:intron | 40.0% | |
| CAGTTTCCTTTCTTCCTCTA+TGG | + | chr7.2:4821579-4821598 | None:intergenic | 40.0% | |
| CATATTGTACAGATCGGTAG+TGG | - | chr7.2:4823779-4823798 | MS.gene28638:intron | 40.0% | |
| CATGCTAAATATGGCAACAG+AGG | - | chr7.2:4821541-4821560 | MS.gene28638:CDS | 40.0% | |
| CGAACATACAACTTTCCTCA+AGG | - | chr7.2:4823821-4823840 | MS.gene28638:intron | 40.0% | |
| CGTGTAACTGATCATAGAGT+TGG | - | chr7.2:4823845-4823864 | MS.gene28638:intron | 40.0% | |
| CTGAACGTCAACCTACAAAT+GGG | + | chr7.2:4822799-4822818 | None:intergenic | 40.0% | |
| CTTTCATCAGCATCATCCTT+AGG | + | chr7.2:4821629-4821648 | None:intergenic | 40.0% | |
| GAAATTCGGAAGTGAGAGTT+CGG | + | chr7.2:4820103-4820122 | None:intergenic | 40.0% | |
| GAATAAAGCCAAAGCTCTCA+AGG | - | chr7.2:4823594-4823613 | MS.gene28638:intron | 40.0% | |
| GAATGACTCACATTCCAACT+GGG | - | chr7.2:4822904-4822923 | MS.gene28638:intron | 40.0% | |
| GAGCAGAAATTTGAAAGCAG+AGG | + | chr7.2:4823573-4823592 | None:intergenic | 40.0% | |
| GAGTGGAATTCATAGAGTAC+AGG | - | chr7.2:4822341-4822360 | MS.gene28638:CDS | 40.0% | |
| GATTCTCTGCTATTAAGCAC+AGG | - | chr7.2:4820275-4820294 | MS.gene28638:intron | 40.0% | |
| GCATAGACACTTCTAATCGT+AGG | + | chr7.2:4820685-4820704 | None:intergenic | 40.0% | |
| GCCTCAAAATTCTGTGTACA+CGG | - | chr7.2:4823337-4823356 | MS.gene28638:intron | 40.0% | |
| GCTGAAGTCATTACTTCCTA+AGG | - | chr7.2:4821610-4821629 | MS.gene28638:intron | 40.0% | |
| GGTGTCCAACCTAACAATTT+CGG | + | chr7.2:4821324-4821343 | None:intergenic | 40.0% | |
| GTACTACTCTTCATGCACAT+TGG | - | chr7.2:4823275-4823294 | MS.gene28638:intron | 40.0% | |
| GTTGTCCAAGATATTGCAAG+AGG | - | chr7.2:4823432-4823451 | MS.gene28638:intron | 40.0% | |
| TAATTACCTCATCAGCCTGT+GGG | + | chr7.2:4822505-4822524 | None:intergenic | 40.0% | |
| TACCATCTGCAGGAAATTGA+TGG | - | chr7.2:4821479-4821498 | MS.gene28638:intron | 40.0% | |
| TATGTTCATGGCCCATTTGT+AGG | - | chr7.2:4822785-4822804 | MS.gene28638:intron | 40.0% | |
| TATTGTACAGATCGGTAGTG+GGG | - | chr7.2:4823781-4823800 | MS.gene28638:intron | 40.0% | |
| TCAATTGAAGGCCAAACAGA+AGG | - | chr7.2:4820506-4820525 | MS.gene28638:intron | 40.0% | |
| TCCGCAGCTGAAAAAGATAA+CGG | + | chr7.2:4820062-4820081 | None:intergenic | 40.0% | |
| TGAACTTACTAATGGAAGGC+AGG | - | chr7.2:4823236-4823255 | MS.gene28638:intron | 40.0% | |
| TGATCGACTACTATGAAGTC+TGG | + | chr7.2:4823653-4823672 | None:intergenic | 40.0% | |
| TTAATTACCTCATCAGCCTG+TGG | + | chr7.2:4822506-4822525 | None:intergenic | 40.0% | |
| ! | AGCTAATGATTTGGCTACAC+CGG | - | chr7.2:4820787-4820806 | MS.gene28638:intron | 40.0% |
| ! | GAGAAGTATGCTCACAACAA+AGG | - | chr7.2:4821990-4822009 | MS.gene28638:CDS | 40.0% |
| ! | GAGGCATTTGACATAGTTGA+TGG | - | chr7.2:4823451-4823470 | MS.gene28638:intron | 40.0% |
| ! | GGCATTTGACATAGTTGATG+GGG | - | chr7.2:4823453-4823472 | MS.gene28638:intron | 40.0% |
| ! | TACAGGTTTTTACCATCTGC+AGG | - | chr7.2:4821469-4821488 | MS.gene28638:intron | 40.0% |
| ! | TCCGTGTACACAGAATTTTG+AGG | + | chr7.2:4823341-4823360 | None:intergenic | 40.0% |
| !! | CTACACCGGCTATCTTATTT+TGG | - | chr7.2:4820801-4820820 | MS.gene28638:intron | 40.0% |
| !! | GCATTTGACATAGTTGATGG+GGG | - | chr7.2:4823454-4823473 | MS.gene28638:intron | 40.0% |
| !! | GGCTGTTGTTATTTCTTCCA+TGG | - | chr7.2:4821121-4821140 | MS.gene28638:CDS | 40.0% |
| !!! | CACATGTTTTGGTGATGTGT+CGG | - | chr7.2:4820631-4820650 | MS.gene28638:intron | 40.0% |
| !!! | TCCGTTATCTTTTTCAGCTG+CGG | - | chr7.2:4820058-4820077 | MS.gene28638:CDS | 40.0% |
| AATTGCAACGGAAACAGCAC+TGG | + | chr7.2:4822480-4822499 | None:intergenic | 45.0% | |
| ACACAGTACCTTGAGAGCTT+TGG | + | chr7.2:4823605-4823624 | None:intergenic | 45.0% | |
| ACTGCAGCTATTGTAGGAGT+TGG | - | chr7.2:4822294-4822313 | MS.gene28638:intron | 45.0% | |
| AGATGAGCGTTCTCAGCATA+TGG | - | chr7.2:4822944-4822963 | MS.gene28638:intron | 45.0% | |
| AGCCATCAATTTCCTGCAGA+TGG | + | chr7.2:4821484-4821503 | None:intergenic | 45.0% | |
| AGTAGCCTCCTGAGAAATTG+AGG | + | chr7.2:4822277-4822296 | None:intergenic | 45.0% | |
| AGTATGCTCACAACAAAGGC+TGG | - | chr7.2:4821994-4822013 | MS.gene28638:CDS | 45.0% | |
| AGTTCCCGTGACCGAAAAAT+TGG | - | chr7.2:4822442-4822461 | MS.gene28638:CDS | 45.0% | |
| ATAGCAATCACGATCCCAGT+TGG | + | chr7.2:4822921-4822940 | None:intergenic | 45.0% | |
| ATCAAAGCTTCGATCAGAGC+AGG | - | chr7.2:4823669-4823688 | MS.gene28638:intron | 45.0% | |
| CAAAGGCTGGAAGTTTGATG+TGG | - | chr7.2:4822007-4822026 | MS.gene28638:CDS | 45.0% | |
| CAGTTCTGTGTGAGTATCTG+TGG | - | chr7.2:4821372-4821391 | MS.gene28638:intron | 45.0% | |
| CATCAACCTAACAGAGCCAA+AGG | + | chr7.2:4822692-4822711 | None:intergenic | 45.0% | |
| CGGAAGAGTAAAGACGAAAC+CGG | + | chr7.2:4820125-4820144 | None:intergenic | 45.0% | |
| CGGTTTCGTCTTTACTCTTC+CGG | - | chr7.2:4820123-4820142 | MS.gene28638:CDS | 45.0% | |
| CTTGACCTCAATTTCTCAGG+AGG | - | chr7.2:4822269-4822288 | MS.gene28638:intron | 45.0% | |
| GATACTCACACAGAACTGCA+AGG | + | chr7.2:4821370-4821389 | None:intergenic | 45.0% | |
| GTAGGGAGACAAAAGCAAAC+AGG | + | chr7.2:4821789-4821808 | None:intergenic | 45.0% | |
| GTTCCCGTGACCGAAAAATT+GGG | - | chr7.2:4822443-4822462 | MS.gene28638:CDS | 45.0% | |
| TGCTACAGACTACAAACGGA+AGG | + | chr7.2:4822202-4822221 | None:intergenic | 45.0% | |
| TTCTATAGATCCGGTGGTTC+AGG | - | chr7.2:4822846-4822865 | MS.gene28638:intron | 45.0% | |
| TTGTGTAAGTGTCTTGGGAG+AGG | - | chr7.2:4820715-4820734 | MS.gene28638:intron | 45.0% | |
| TTTCAGCATCCAACATGCAC+TGG | - | chr7.2:4822142-4822161 | MS.gene28638:CDS | 45.0% | |
| ! | TTGAAAGCAGAGGGCACATA+AGG | + | chr7.2:4823563-4823582 | None:intergenic | 45.0% |
| !! | ACGGTGCTACAGACTACAAA+CGG | + | chr7.2:4822206-4822225 | None:intergenic | 45.0% |
| !! | ACGTCCCAATTTTTCGGTCA+CGG | + | chr7.2:4822450-4822469 | None:intergenic | 45.0% |
| !! | GACATAGTTGATGGGGGATT+TGG | - | chr7.2:4823460-4823479 | MS.gene28638:intron | 45.0% |
| !! | GGCTCTGTTAGGTTGATGAA+TGG | - | chr7.2:4822694-4822713 | MS.gene28638:intron | 45.0% |
| !! | TGGTTTCCTTTGGCTCTGTT+AGG | - | chr7.2:4822683-4822702 | MS.gene28638:intron | 45.0% |
| !!! | ACAATTTTGCAGGCACTGGT+GGG | - | chr7.2:4821841-4821860 | MS.gene28638:intron | 45.0% |
| !!! | TACAATTTTGCAGGCACTGG+TGG | - | chr7.2:4821840-4821859 | MS.gene28638:intron | 45.0% |
| AAGGAGCTTCGAAAGCTCAG+TGG | - | chr7.2:4820465-4820484 | MS.gene28638:intron | 50.0% | |
| AATTCTCCCACAGGCTGATG+AGG | - | chr7.2:4822496-4822515 | MS.gene28638:CDS | 50.0% | |
| AGCCTGTGGGAGAATTGCAA+CGG | + | chr7.2:4822492-4822511 | None:intergenic | 50.0% | |
| CAACAGGACCTAAGACAAGC+TGG | + | chr7.2:4821749-4821768 | None:intergenic | 50.0% | |
| CTCTCTCCCCCCTTATATGA+AGG | + | chr7.2:4820927-4820946 | None:intergenic | 50.0% | |
| CTTCTAATCGTAGGCCTGTC+TGG | + | chr7.2:4820676-4820695 | None:intergenic | 50.0% | |
| GACACTGTCAAACACCAGAC+AGG | - | chr7.2:4820659-4820678 | MS.gene28638:intron | 50.0% | |
| GACGTGTCTGTGTTTGTGCT+TGG | + | chr7.2:4820564-4820583 | None:intergenic | 50.0% | |
| GAGGCTACTGCAGCTATTGT+AGG | - | chr7.2:4822288-4822307 | MS.gene28638:intron | 50.0% | |
| GTGTCTGTGTTTGTGCTTGG+TGG | + | chr7.2:4820561-4820580 | None:intergenic | 50.0% | |
| TACTCTGACTGCGACGTTTC+TGG | + | chr7.2:4820432-4820451 | None:intergenic | 50.0% | |
| TATAGATCCGGTGGTTCAGG+TGG | - | chr7.2:4822849-4822868 | MS.gene28638:intron | 50.0% | |
| TCCTTTCTTCCTCTATGGCC+TGG | + | chr7.2:4821574-4821593 | None:intergenic | 50.0% | |
| TGATCAGTTACACGGCCTTG+AGG | + | chr7.2:4823839-4823858 | None:intergenic | 50.0% | |
| TTCCGTTGCAATTCTCCCAC+AGG | - | chr7.2:4822487-4822506 | MS.gene28638:CDS | 50.0% | |
| !! | CGTCCCAATTTTTCGGTCAC+GGG | + | chr7.2:4822449-4822468 | None:intergenic | 50.0% |
| !! | TGCATTTTGGAGGTACGAGC+AGG | - | chr7.2:4821653-4821672 | MS.gene28638:CDS | 50.0% |
| !!! | CAATTTTGCAGGCACTGGTG+GGG | - | chr7.2:4821842-4821861 | MS.gene28638:intron | 50.0% |
| AAGGTCCCGGGTTTGAACCT+GGG | + | chr7.2:4821351-4821370 | None:intergenic | 55.0% | |
| ACACAGAACTGCAAGGTCCC+GGG | + | chr7.2:4821363-4821382 | None:intergenic | 55.0% | |
| ATGCTGACCACCTGAACCAC+CGG | + | chr7.2:4822859-4822878 | None:intergenic | 55.0% | |
| CACACAGAACTGCAAGGTCC+CGG | + | chr7.2:4821364-4821383 | None:intergenic | 55.0% | |
| CCTTCACCCAGGTTCAAACC+CGG | - | chr7.2:4821342-4821361 | MS.gene28638:intron | 55.0% | |
| CGGAAGGTTCCAGTGCATGT+TGG | + | chr7.2:4822154-4822173 | None:intergenic | 55.0% | |
| CTTCACCCAGGTTCAAACCC+GGG | - | chr7.2:4821343-4821362 | MS.gene28638:intron | 55.0% | |
| GCCAGGCCATAGAGGAAGAA+AGG | - | chr7.2:4821570-4821589 | MS.gene28638:intron | 55.0% | |
| GGAAATGAGCCAGGCCATAG+AGG | - | chr7.2:4821562-4821581 | MS.gene28638:intron | 55.0% | |
| GGCAACAGAGGAAATGAGCC+AGG | - | chr7.2:4821553-4821572 | MS.gene28638:CDS | 55.0% | |
| ! | TAGGTTGGACACCTTCACCC+AGG | - | chr7.2:4821331-4821350 | MS.gene28638:intron | 55.0% |
| CAAGGTCCCGGGTTTGAACC+TGG | + | chr7.2:4821352-4821371 | None:intergenic | 60.0% | |
| CCGGGTTTGAACCTGGGTGA+AGG | + | chr7.2:4821345-4821364 | None:intergenic | 60.0% | |
| !!! | TTTTGCAGGCACTGGTGGGG+AGG | - | chr7.2:4821845-4821864 | MS.gene28638:intron | 60.0% |
| !! | TGCAGGCACTGGTGGGGAGG+AGG | - | chr7.2:4821848-4821867 | MS.gene28638:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 4820030 | 4823985 | 4820030 | ID=MS.gene28638 |
| chr7.2 | mRNA | 4820030 | 4823985 | 4820030 | ID=MS.gene28638.t1;Parent=MS.gene28638 |
| chr7.2 | exon | 4823871 | 4823985 | 4823871 | ID=MS.gene28638.t1.exon1;Parent=MS.gene28638.t1 |
| chr7.2 | CDS | 4823871 | 4823985 | 4823871 | ID=cds.MS.gene28638.t1;Parent=MS.gene28638.t1 |
| chr7.2 | exon | 4823688 | 4823788 | 4823688 | ID=MS.gene28638.t1.exon2;Parent=MS.gene28638.t1 |
| chr7.2 | CDS | 4823688 | 4823788 | 4823688 | ID=cds.MS.gene28638.t1;Parent=MS.gene28638.t1 |
| chr7.2 | exon | 4823488 | 4823586 | 4823488 | ID=MS.gene28638.t1.exon3;Parent=MS.gene28638.t1 |
| chr7.2 | CDS | 4823488 | 4823586 | 4823488 | ID=cds.MS.gene28638.t1;Parent=MS.gene28638.t1 |
| chr7.2 | exon | 4822341 | 4822524 | 4822341 | ID=MS.gene28638.t1.exon4;Parent=MS.gene28638.t1 |
| chr7.2 | CDS | 4822341 | 4822524 | 4822341 | ID=cds.MS.gene28638.t1;Parent=MS.gene28638.t1 |
| chr7.2 | exon | 4822114 | 4822162 | 4822114 | ID=MS.gene28638.t1.exon5;Parent=MS.gene28638.t1 |
| chr7.2 | CDS | 4822114 | 4822162 | 4822114 | ID=cds.MS.gene28638.t1;Parent=MS.gene28638.t1 |
| chr7.2 | exon | 4821951 | 4822029 | 4821951 | ID=MS.gene28638.t1.exon6;Parent=MS.gene28638.t1 |
| chr7.2 | CDS | 4821951 | 4822029 | 4821951 | ID=cds.MS.gene28638.t1;Parent=MS.gene28638.t1 |
| chr7.2 | exon | 4821653 | 4821727 | 4821653 | ID=MS.gene28638.t1.exon7;Parent=MS.gene28638.t1 |
| chr7.2 | CDS | 4821653 | 4821727 | 4821653 | ID=cds.MS.gene28638.t1;Parent=MS.gene28638.t1 |
| chr7.2 | exon | 4821498 | 4821575 | 4821498 | ID=MS.gene28638.t1.exon8;Parent=MS.gene28638.t1 |
| chr7.2 | CDS | 4821498 | 4821575 | 4821498 | ID=cds.MS.gene28638.t1;Parent=MS.gene28638.t1 |
| chr7.2 | exon | 4821050 | 4821208 | 4821050 | ID=MS.gene28638.t1.exon9;Parent=MS.gene28638.t1 |
| chr7.2 | CDS | 4821050 | 4821208 | 4821050 | ID=cds.MS.gene28638.t1;Parent=MS.gene28638.t1 |
| chr7.2 | exon | 4820325 | 4820420 | 4820325 | ID=MS.gene28638.t1.exon10;Parent=MS.gene28638.t1 |
| chr7.2 | CDS | 4820325 | 4820420 | 4820325 | ID=cds.MS.gene28638.t1;Parent=MS.gene28638.t1 |
| chr7.2 | exon | 4820030 | 4820224 | 4820030 | ID=MS.gene28638.t1.exon11;Parent=MS.gene28638.t1 |
| chr7.2 | CDS | 4820030 | 4820224 | 4820030 | ID=cds.MS.gene28638.t1;Parent=MS.gene28638.t1 |
| Gene Sequence |
| Protein sequence |
