Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29611.t1 | XP_003616589.2 | 98.5 | 332 | 5 | 0 | 1 | 332 | 1 | 332 | 6.10E-192 | 679.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29611.t1 | Q9LY62 | 65.9 | 331 | 105 | 4 | 3 | 332 | 11 | 334 | 3.2e-125 | 449.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29611.t1 | G7KGW5 | 98.5 | 332 | 5 | 0 | 1 | 332 | 1 | 332 | 4.4e-192 | 679.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene29611 | -0.812398 | 4.33E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene29611 | -0.80667 | 7.35E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene29611 | -0.830687 | 2.55E-55 | -1.69E-46 |
| MS.gene049313 | MS.gene29611 | 0.852475 | 4.51E-61 | -1.69E-46 |
| MS.gene049320 | MS.gene29611 | -0.846437 | 2.17E-59 | -1.69E-46 |
| MS.gene049627 | MS.gene29611 | -0.831676 | 1.46E-55 | -1.69E-46 |
| MS.gene050163 | MS.gene29611 | -0.844696 | 6.44E-59 | -1.69E-46 |
| MS.gene050165 | MS.gene29611 | -0.830204 | 3.35E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene29611 | -0.844095 | 9.35E-59 | -1.69E-46 |
| MS.gene050518 | MS.gene29611 | -0.807622 | 4.62E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene29611 | -0.826339 | 2.86E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene29611 | -0.833543 | 5.02E-56 | -1.69E-46 |
| MS.gene050883 | MS.gene29611 | 0.803604 | 3.22E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene29611 | -0.829598 | 4.71E-55 | -1.69E-46 |
| MS.gene05100 | MS.gene29611 | -0.839728 | 1.33E-57 | -1.69E-46 |
| MS.gene051551 | MS.gene29611 | -0.807005 | 6.24E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene29611 | -0.808415 | 3.13E-50 | -1.69E-46 |
| MS.gene052937 | MS.gene29611 | 0.822061 | 2.90E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene29611 | -0.812207 | 4.76E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene29611 | -0.81543 | 9.28E-52 | -1.69E-46 |
| MS.gene053549 | MS.gene29611 | 0.80828 | 3.35E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene29611 | -0.821689 | 3.53E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene29611 | -0.803807 | 2.92E-49 | -1.69E-46 |
| MS.gene054954 | MS.gene29611 | -0.829012 | 6.53E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene29611 | -0.854555 | 1.14E-61 | -1.69E-46 |
| MS.gene055502 | MS.gene29611 | -0.806486 | 8.04E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene29611 | -0.819639 | 1.04E-52 | -1.69E-46 |
| MS.gene056374 | MS.gene29611 | -0.819813 | 9.53E-53 | -1.69E-46 |
| MS.gene056550 | MS.gene29611 | 0.820444 | 6.84E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene29611 | -0.829623 | 4.64E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene29611 | -0.828091 | 1.09E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene29611 | -0.808028 | 3.79E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene29611 | -0.809095 | 2.24E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene29611 | -0.863422 | 2.52E-64 | -1.69E-46 |
| MS.gene059677 | MS.gene29611 | -0.845292 | 4.45E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene29611 | -0.834171 | 3.50E-56 | -1.69E-46 |
| MS.gene060337 | MS.gene29611 | 0.808938 | 2.42E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene29611 | -0.803613 | 3.21E-49 | -1.69E-46 |
| MS.gene06077 | MS.gene29611 | -0.82647 | 2.67E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene29611 | -0.814651 | 1.38E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene29611 | MS.gene32658 | PPI |
| MS.gene29611 | MS.gene036711 | PPI |
| MS.gene29611 | MS.gene80232 | PPI |
| MS.gene29611 | MS.gene014858 | PPI |
| MS.gene29611 | MS.gene58030 | PPI |
| MS.gene29611 | MS.gene072869 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29611.t1 | MTR_5g082110 | 98.494 | 332 | 5 | 0 | 1 | 332 | 1 | 332 | 0.0 | 680 |
| MS.gene29611.t1 | MTR_5g082110 | 90.083 | 363 | 5 | 1 | 1 | 332 | 1 | 363 | 0.0 | 665 |
| MS.gene29611.t1 | MTR_1g090920 | 33.193 | 238 | 131 | 6 | 85 | 314 | 538 | 755 | 2.17e-28 | 116 |
| MS.gene29611.t1 | MTR_1g009180 | 32.184 | 261 | 148 | 9 | 81 | 326 | 28 | 274 | 1.33e-27 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene29611.t1 | AT3G55830 | 67.372 | 331 | 100 | 4 | 3 | 332 | 11 | 334 | 2.45e-166 | 466 |
| MS.gene29611.t1 | AT5G04500 | 30.000 | 240 | 136 | 6 | 85 | 314 | 532 | 749 | 1.46e-28 | 116 |
| MS.gene29611.t1 | AT1G80290 | 30.657 | 274 | 158 | 9 | 73 | 326 | 49 | 310 | 2.75e-21 | 93.2 |
| MS.gene29611.t1 | AT1G80290 | 30.657 | 274 | 158 | 9 | 73 | 326 | 57 | 318 | 3.07e-21 | 93.2 |
Find 77 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATAGATTTAAAGAAATTA+AGG | 0.224224 | 5.2:+70121245 | MS.gene29611:CDS |
| ATTTAAAGAAATTAAGGATT+TGG | 0.259132 | 5.2:+70121251 | MS.gene29611:CDS |
| CTGGTTCAAGTTTCTTATTA+TGG | 0.259686 | 5.2:+70119611 | MS.gene29611:CDS |
| GAACCTTGAATCAGTGAAAC+TGG | 0.317353 | 5.2:-70119662 | None:intergenic |
| ATCAACTGGAATTAGTAGTT+TGG | 0.324045 | 5.2:+70123410 | MS.gene29611:CDS |
| CTTGATCTTGGCTGATTTAA+CGG | 0.328719 | 5.2:-70119539 | None:intergenic |
| TGGAATTCGCATTTGATGTT+TGG | 0.335175 | 5.2:+70121328 | MS.gene29611:CDS |
| ATATCGTCCGTCTCTAGATT+TGG | 0.345844 | 5.2:-70121181 | None:intergenic |
| AACCTATTTACTTCTGTGTA+TGG | 0.359210 | 5.2:+70123465 | MS.gene29611:CDS |
| ATATATGAGATTGGATCAAC+TGG | 0.362340 | 5.2:+70123396 | MS.gene29611:CDS |
| AATTACCTTTAACCCATAAC+GGG | 0.378032 | 5.2:-70122423 | None:intergenic |
| TCAACTGGAATTAGTAGTTT+GGG | 0.396190 | 5.2:+70123411 | MS.gene29611:CDS |
| GAGAATTTGTAACTAAGAAC+AGG | 0.400975 | 5.2:+70122229 | MS.gene29611:CDS |
| GCCCATACACAGAAGTAAAT+AGG | 0.401306 | 5.2:-70123467 | None:intergenic |
| AGACTTTCTGATGGAGGATT+GGG | 0.401771 | 5.2:-70121129 | None:intergenic |
| TTTCTTGTCGCAAATGCAAC+TGG | 0.403236 | 5.2:+70122394 | MS.gene29611:CDS |
| TGCGAATTCCACCGCAGAGC+AGG | 0.406254 | 5.2:-70121316 | None:intergenic |
| TGGTGGTCTGTGTGGTGGAC+GGG | 0.410126 | 5.2:+70122120 | MS.gene29611:CDS |
| AAGACTTTCTGATGGAGGAT+TGG | 0.418259 | 5.2:-70121130 | None:intergenic |
| GTCGGATTGAACAGAGGTTT+CGG | 0.421732 | 5.2:+70119500 | MS.gene29611:CDS |
| AAATTACCTTTAACCCATAA+CGG | 0.425637 | 5.2:-70122424 | None:intergenic |
| AAATAACAGAAGCTTGATCT+TGG | 0.452251 | 5.2:-70119551 | None:intergenic |
| ATAGTCGCAATGTCTGGTTT+TGG | 0.454922 | 5.2:+70123526 | MS.gene29611:CDS |
| TGTCCATTGGTTAGATTCGT+TGG | 0.458659 | 5.2:+70121389 | MS.gene29611:CDS |
| ACAGGTAAAATATATGAGAT+TGG | 0.461138 | 5.2:+70123387 | MS.gene29611:intron |
| GACAACAACAAATTTAGATA+TGG | 0.462661 | 5.2:+70122093 | MS.gene29611:CDS |
| ATGGTGGTCTGTGTGGTGGA+CGG | 0.464395 | 5.2:+70122119 | MS.gene29611:CDS |
| TTTCACTGACGTATATACTA+AGG | 0.468030 | 5.2:-70123496 | None:intergenic |
| CCGTTGATAGTCGCAATGTC+TGG | 0.468930 | 5.2:+70123520 | MS.gene29611:CDS |
| TTCCCAGTTTCACTGATTCA+AGG | 0.472796 | 5.2:+70119659 | MS.gene29611:CDS |
| ACAAATTCTCTAATTGATGA+TGG | 0.477812 | 5.2:-70122216 | None:intergenic |
| TTTGTGAAAGAATGCTGCCT+TGG | 0.491658 | 5.2:-70122163 | None:intergenic |
| ACCTATTTACTTCTGTGTAT+GGG | 0.504941 | 5.2:+70123466 | MS.gene29611:CDS |
| ACAAATCCCACCATTGCATC+CGG | 0.508793 | 5.2:-70121360 | None:intergenic |
| TCAGTGAAACTGGGAATTTG+AGG | 0.510055 | 5.2:-70119652 | None:intergenic |
| GATTTGTACCTCGTGTCCAT+TGG | 0.522707 | 5.2:+70121376 | MS.gene29611:CDS |
| TGATGTTTGGCAAAGTGCAC+CGG | 0.530100 | 5.2:+70121341 | MS.gene29611:CDS |
| GGAGCTGTTGGTTGAACCGT+CGG | 0.530590 | 5.2:+70119482 | MS.gene29611:CDS |
| CAGTGAAACTGGGAATTTGA+GGG | 0.535082 | 5.2:-70119651 | None:intergenic |
| AACAACAAATTTAGATATGG+TGG | 0.541211 | 5.2:+70122096 | MS.gene29611:CDS |
| AAGTGCACCGGATGCAATGG+TGG | 0.544682 | 5.2:+70121353 | MS.gene29611:CDS |
| TTTAGAAGACTTTCTGATGG+AGG | 0.564085 | 5.2:-70121135 | None:intergenic |
| CCAGACATTGCGACTATCAA+CGG | 0.564873 | 5.2:-70123520 | None:intergenic |
| ATGGTGGATGGTGGTCTGTG+TGG | 0.564923 | 5.2:+70122112 | MS.gene29611:CDS |
| GTGGATGGTGGTCTGTGTGG+TGG | 0.565684 | 5.2:+70122115 | MS.gene29611:CDS |
| CATATTTCCCTGCTCTGCGG+TGG | 0.569128 | 5.2:+70121308 | MS.gene29611:CDS |
| GCGAATTCCACCGCAGAGCA+GGG | 0.571199 | 5.2:-70121315 | None:intergenic |
| TATTAGCGGCGGTGATGAGA+GGG | 0.584371 | 5.2:+70119461 | None:intergenic |
| ACGGACGATATGTGAAGTTG+AGG | 0.586320 | 5.2:+70121193 | MS.gene29611:CDS |
| CGGTGATGAGAGGGAGCTGT+TGG | 0.589133 | 5.2:+70119470 | None:intergenic |
| TTATTAGCGGCGGTGATGAG+AGG | 0.597155 | 5.2:+70119460 | None:intergenic |
| TTCACTGACGTATATACTAA+GGG | 0.597837 | 5.2:-70123495 | None:intergenic |
| ACAAATTTAGATATGGTGGA+TGG | 0.602492 | 5.2:+70122100 | MS.gene29611:CDS |
| ATACCAACGAATCTAACCAA+TGG | 0.611009 | 5.2:-70121392 | None:intergenic |
| ATATAGCATGGTGCTCTCCA+AGG | 0.616926 | 5.2:+70122146 | MS.gene29611:CDS |
| GTTTGGGAGGTCATAGTGAA+CGG | 0.624381 | 5.2:+70123427 | MS.gene29611:CDS |
| TATTTACTTCTGTGTATGGG+CGG | 0.627886 | 5.2:+70123469 | MS.gene29611:CDS |
| TTGAGTCAGTACATATTGTG+TGG | 0.629828 | 5.2:+70121100 | MS.gene29611:CDS |
| AACCTTGAATCAGTGAAACT+GGG | 0.631242 | 5.2:-70119661 | None:intergenic |
| ACTGGAATTAGTAGTTTGGG+AGG | 0.632754 | 5.2:+70123414 | MS.gene29611:CDS |
| GCAAAGTGCACCGGATGCAA+TGG | 0.638093 | 5.2:+70121350 | MS.gene29611:CDS |
| ATTACCTTTAACCCATAACG+GGG | 0.639745 | 5.2:-70122422 | None:intergenic |
| AGTGCACCGGATGCAATGGT+GGG | 0.640002 | 5.2:+70121354 | MS.gene29611:CDS |
| AATTTAGATATGGTGGATGG+TGG | 0.653603 | 5.2:+70122103 | MS.gene29611:CDS |
| GATCTTGGCTGATTTAACGG+TGG | 0.667058 | 5.2:-70119536 | None:intergenic |
| TGAACCGTCGGATTGAACAG+AGG | 0.670462 | 5.2:+70119494 | MS.gene29611:CDS |
| ATATGTACTGACTCAAGTCG+AGG | 0.675049 | 5.2:-70121093 | None:intergenic |
| AGTGAAACTGGGAATTTGAG+GGG | 0.676257 | 5.2:-70119650 | None:intergenic |
| GTAAAGTCCAAATCTAGAGA+CGG | 0.683801 | 5.2:+70121174 | MS.gene29611:CDS |
| GAAACCTCTGTTCAATCCGA+CGG | 0.684402 | 5.2:-70119498 | None:intergenic |
| GAATCTAACCAATGGACACG+AGG | 0.709906 | 5.2:-70121384 | None:intergenic |
| ATTCTATTGTAATGAACACG+TGG | 0.719028 | 5.2:+70121022 | MS.gene29611:CDS |
| GTTGAGGTTTGATATCAACA+CGG | 0.722201 | 5.2:+70121209 | MS.gene29611:CDS |
| TGTCATATTTCCCTGCTCTG+CGG | 0.730173 | 5.2:+70121305 | MS.gene29611:CDS |
| TTACCTTTAACCCATAACGG+GGG | 0.745725 | 5.2:-70122421 | None:intergenic |
| GTGGACGGGTACATATAGCA+TGG | 0.778264 | 5.2:+70122134 | MS.gene29611:CDS |
| TAGATTTGGACTTTACAACG+TGG | 0.788272 | 5.2:-70121167 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGTTTATCTTATAATTA+AGG | + | chr5.2:70122947-70122966 | MS.gene29611:intron | 10.0% |
| !! | ATTAAAAAAAAAAACTTGTA+AGG | + | chr5.2:70122032-70122051 | MS.gene29611:intron | 10.0% |
| !! | TAATAGATTTAAAGAAATTA+AGG | + | chr5.2:70121245-70121264 | MS.gene29611:CDS | 10.0% |
| !! | TTATGTTTAGTATTTAAATT+TGG | + | chr5.2:70120072-70120091 | MS.gene29611:intron | 10.0% |
| !!! | GAAAATACAAAATTTTTTTT+TGG | + | chr5.2:70119799-70119818 | MS.gene29611:intron | 10.0% |
| !! | AAAAAAAAAATTAAAAGTCC+AGG | - | chr5.2:70120417-70120436 | None:intergenic | 15.0% |
| !! | AAAAAAATTTACATTGAACT+TGG | - | chr5.2:70120634-70120653 | None:intergenic | 15.0% |
| !! | AAATAAATCAAAAATTAGCA+GGG | - | chr5.2:70122277-70122296 | None:intergenic | 15.0% |
| !! | ATAGGAAATATAAATAGAAA+GGG | + | chr5.2:70119964-70119983 | MS.gene29611:intron | 15.0% |
| !! | ATTTAAAGAAATTAAGGATT+TGG | + | chr5.2:70121251-70121270 | MS.gene29611:CDS | 15.0% |
| !! | GAAGTGAATTTATATATATT+TGG | + | chr5.2:70120591-70120610 | MS.gene29611:intron | 15.0% |
| !! | GTAAAAAAAAATTAGATGTT+TGG | - | chr5.2:70120743-70120762 | None:intergenic | 15.0% |
| !! | TAAATAAATCAAAAATTAGC+AGG | - | chr5.2:70122278-70122297 | None:intergenic | 15.0% |
| !! | TTATTGATCAAATAACAAAA+TGG | - | chr5.2:70122332-70122351 | None:intergenic | 15.0% |
| !!! | AATACAAAATTTTTTTTTGG+TGG | + | chr5.2:70119802-70119821 | MS.gene29611:intron | 15.0% |
| !!! | ATACAAAATTTTTTTTTGGT+GGG | + | chr5.2:70119803-70119822 | MS.gene29611:intron | 15.0% |
| !!! | TGGACTTTTAATTTTTTTTT+TGG | + | chr5.2:70120416-70120435 | MS.gene29611:intron | 15.0% |
| !!! | TTAATTTGAAGAGTAAAATA+GGG | + | chr5.2:70120040-70120059 | MS.gene29611:intron | 15.0% |
| !!! | TTTAATTTGAAGAGTAAAAT+AGG | + | chr5.2:70120039-70120058 | MS.gene29611:intron | 15.0% |
| !! | AATAAATCAAAAATTAGCAG+GGG | - | chr5.2:70122276-70122295 | None:intergenic | 20.0% |
| !! | AATAATTCAAATGATTTACC+AGG | + | chr5.2:70122347-70122366 | MS.gene29611:intron | 20.0% |
| !! | CATAGGAAATATAAATAGAA+AGG | + | chr5.2:70119963-70119982 | MS.gene29611:intron | 20.0% |
| !! | CGTTCAATAATTAAAAGATA+CGG | - | chr5.2:70122457-70122476 | None:intergenic | 20.0% |
| !! | CTTAAAAGGTAAATACTATT+GGG | - | chr5.2:70121647-70121666 | None:intergenic | 20.0% |
| !! | GAATTTCTATATATGTGTTT+GGG | + | chr5.2:70119890-70119909 | MS.gene29611:intron | 20.0% |
| !! | GGTTTCAAAAATAAATTTCA+TGG | - | chr5.2:70123093-70123112 | None:intergenic | 20.0% |
| !! | GTTTGAAAAATACAAAGTTT+CGG | + | chr5.2:70119855-70119874 | MS.gene29611:intron | 20.0% |
| !! | TAACAATAAGAGATAAAAAG+TGG | - | chr5.2:70120679-70120698 | None:intergenic | 20.0% |
| !! | TAATTAAGGAAGTTAAAGTA+TGG | + | chr5.2:70122961-70122980 | MS.gene29611:intron | 20.0% |
| !! | TATATATGATGTTTACATTG+TGG | + | chr5.2:70123350-70123369 | MS.gene29611:intron | 20.0% |
| !! | TCTTAAAAGGTAAATACTAT+TGG | - | chr5.2:70121648-70121667 | None:intergenic | 20.0% |
| !! | TGATTATGTATGATTTGATT+TGG | + | chr5.2:70120554-70120573 | MS.gene29611:intron | 20.0% |
| !! | TTAAAAGGTAAATACTATTG+GGG | - | chr5.2:70121646-70121665 | None:intergenic | 20.0% |
| !!! | AAAGTTTCGGTTTTTTTTTA+TGG | + | chr5.2:70119868-70119887 | MS.gene29611:intron | 20.0% |
| !!! | AAGGGATTTTGTATATAATA+AGG | + | chr5.2:70119982-70120001 | MS.gene29611:intron | 20.0% |
| !!! | ACATTTGTAAGATTGATTTA+TGG | + | chr5.2:70122586-70122605 | MS.gene29611:intron | 20.0% |
| !!! | AGTTTTGTAGTTTCTATTTT+AGG | + | chr5.2:70119757-70119776 | MS.gene29611:intron | 20.0% |
| !!! | ATATATTTTACCTGTAACAA+AGG | - | chr5.2:70123382-70123401 | None:intergenic | 20.0% |
| !!! | CGTATCTTTTAATTATTGAA+CGG | + | chr5.2:70122455-70122474 | MS.gene29611:intron | 20.0% |
| !!! | GATTAGTGTTATTTATAGAT+TGG | + | chr5.2:70120114-70120133 | MS.gene29611:intron | 20.0% |
| !!! | GTATCTTTTAATTATTGAAC+GGG | + | chr5.2:70122456-70122475 | MS.gene29611:intron | 20.0% |
| !!! | GTCATTTTCTCAAATATTAT+TGG | + | chr5.2:70120270-70120289 | MS.gene29611:intron | 20.0% |
| !!! | GTTTTGTAGTTTCTATTTTA+GGG | + | chr5.2:70119758-70119777 | MS.gene29611:intron | 20.0% |
| !!! | TTCATGCTTAATTTTGAAAT+GGG | - | chr5.2:70121725-70121744 | None:intergenic | 20.0% |
| !!! | TTTCATGCTTAATTTTGAAA+TGG | - | chr5.2:70121726-70121745 | None:intergenic | 20.0% |
| !!! | TTTGGAATGAATATATAACA+AGG | + | chr5.2:70120090-70120109 | MS.gene29611:intron | 20.0% |
| !!! | TTTTGTTCAAATTTGTATAC+TGG | + | chr5.2:70120376-70120395 | MS.gene29611:intron | 20.0% |
| !!! | TTTTTTTGTTTGTTTTGCAT+AGG | + | chr5.2:70119946-70119965 | MS.gene29611:intron | 20.0% |
| ! | AAAGTTATAGCAATAGCAAA+AGG | + | chr5.2:70122788-70122807 | MS.gene29611:intron | 25.0% |
| ! | AAATTACCTTTAACCCATAA+CGG | - | chr5.2:70122427-70122446 | None:intergenic | 25.0% |
| ! | AACAACAAATTTAGATATGG+TGG | + | chr5.2:70122096-70122115 | MS.gene29611:CDS | 25.0% |
| ! | AATGTGTAGTCAAAATATCA+AGG | - | chr5.2:70121464-70121483 | None:intergenic | 25.0% |
| ! | ACAAATTCTCTAATTGATGA+TGG | - | chr5.2:70122219-70122238 | None:intergenic | 25.0% |
| ! | ACAGGTAAAATATATGAGAT+TGG | + | chr5.2:70123387-70123406 | MS.gene29611:intron | 25.0% |
| ! | ACTAATCATGTATCATTCAT+TGG | - | chr5.2:70122619-70122638 | None:intergenic | 25.0% |
| ! | ATAAATCAAAAATTAGCAGG+GGG | - | chr5.2:70122275-70122294 | None:intergenic | 25.0% |
| ! | ATATCTATGAAGCATAGATA+CGG | - | chr5.2:70120325-70120344 | None:intergenic | 25.0% |
| ! | CAATGAAGAATATGAAAATG+TGG | - | chr5.2:70122668-70122687 | None:intergenic | 25.0% |
| ! | GACAACAACAAATTTAGATA+TGG | + | chr5.2:70122093-70122112 | MS.gene29611:CDS | 25.0% |
| ! | GGAATTTCTATATATGTGTT+TGG | + | chr5.2:70119889-70119908 | MS.gene29611:intron | 25.0% |
| ! | GTTTAAATTCATGATTGAGA+GGG | - | chr5.2:70120801-70120820 | None:intergenic | 25.0% |
| ! | TCAAGGATAATTGAAAATCA+TGG | - | chr5.2:70121447-70121466 | None:intergenic | 25.0% |
| ! | TCTCAATCATGAATTTAAAC+AGG | + | chr5.2:70120801-70120820 | MS.gene29611:intron | 25.0% |
| ! | TGAATGATACATGATTAGTA+TGG | + | chr5.2:70122620-70122639 | MS.gene29611:intron | 25.0% |
| ! | TGATCAAATAACAAAATGGT+TGG | - | chr5.2:70122328-70122347 | None:intergenic | 25.0% |
| ! | TGTAATTATATGTGTCATGT+TGG | - | chr5.2:70120241-70120260 | None:intergenic | 25.0% |
| ! | TGTGAATAACTAATTAAGCT+TGG | + | chr5.2:70121529-70121548 | MS.gene29611:intron | 25.0% |
| ! | TGTTTAAATTCATGATTGAG+AGG | - | chr5.2:70120802-70120821 | None:intergenic | 25.0% |
| ! | TTGCAAAACTACATCTTAAA+AGG | - | chr5.2:70121661-70121680 | None:intergenic | 25.0% |
| !! | ATAAACAACAATTAGTTCTC+TGG | - | chr5.2:70120981-70121000 | None:intergenic | 25.0% |
| !! | CACATTTTCATATTCTTCAT+TGG | + | chr5.2:70122666-70122685 | MS.gene29611:intron | 25.0% |
| !! | TATCGTGATTTCATTTGTTT+TGG | + | chr5.2:70123051-70123070 | MS.gene29611:intron | 25.0% |
| !! | TGGATAATTTAGTGTGTTTT+TGG | + | chr5.2:70120499-70120518 | MS.gene29611:intron | 25.0% |
| !!! | GTGCTATTTTTGTTGTTTTA+TGG | - | chr5.2:70121757-70121776 | None:intergenic | 25.0% |
| !!! | TATTTTAGAAGACTTTCTGA+TGG | - | chr5.2:70121141-70121160 | None:intergenic | 25.0% |
| !!! | TTGATTTGTATTACCATGAT+GGG | - | chr5.2:70123234-70123253 | None:intergenic | 25.0% |
| !!! | TTTGATTTGTATTACCATGA+TGG | - | chr5.2:70123235-70123254 | None:intergenic | 25.0% |
| !!! | TTTGTTGTTTTATGGCAATA+AGG | - | chr5.2:70121749-70121768 | None:intergenic | 25.0% |
| AAATAACAGAAGCTTGATCT+TGG | - | chr5.2:70119554-70119573 | None:intergenic | 30.0% | |
| AAGAGATAAAAAGTGGATCT+TGG | - | chr5.2:70120672-70120691 | None:intergenic | 30.0% | |
| AATAAAGGAACAAGAAGTCA+AGG | - | chr5.2:70122840-70122859 | None:intergenic | 30.0% | |
| AATTACCTTTAACCCATAAC+GGG | - | chr5.2:70122426-70122445 | None:intergenic | 30.0% | |
| AGAGATAAAAAGTGGATCTT+GGG | - | chr5.2:70120671-70120690 | None:intergenic | 30.0% | |
| AGATTATACAAAGCCTAACA+AGG | - | chr5.2:70123165-70123184 | None:intergenic | 30.0% | |
| AGTGATCATTTGATCAACTA+CGG | + | chr5.2:70120450-70120469 | MS.gene29611:intron | 30.0% | |
| ATATATGAGATTGGATCAAC+TGG | + | chr5.2:70123396-70123415 | MS.gene29611:CDS | 30.0% | |
| ATCAACTGGAATTAGTAGTT+TGG | + | chr5.2:70123410-70123429 | MS.gene29611:CDS | 30.0% | |
| ATTCTATTGTAATGAACACG+TGG | + | chr5.2:70121022-70121041 | MS.gene29611:CDS | 30.0% | |
| CAATCTTACAAATGTCAGAA+AGG | - | chr5.2:70122581-70122600 | None:intergenic | 30.0% | |
| CATAAAACCTAACATTAGCA+TGG | - | chr5.2:70123208-70123227 | None:intergenic | 30.0% | |
| GAGAATTTGTAACTAAGAAC+AGG | + | chr5.2:70122229-70122248 | MS.gene29611:CDS | 30.0% | |
| GCATACTATTGTGAAACATA+TGG | + | chr5.2:70121691-70121710 | MS.gene29611:intron | 30.0% | |
| GTAAATACTATTGGGGATTA+TGG | - | chr5.2:70121639-70121658 | None:intergenic | 30.0% | |
| GTTGTTTATTCTTTGTTCAC+AGG | + | chr5.2:70120992-70121011 | MS.gene29611:intron | 30.0% | |
| TACTAATTGCTTCAATGTAC+AGG | - | chr5.2:70122867-70122886 | None:intergenic | 30.0% | |
| TATGAAGCATATATACTCCT+CGG | + | chr5.2:70120174-70120193 | MS.gene29611:intron | 30.0% | |
| TATTCAATGTTCTTGCAGAA+TGG | + | chr5.2:70122069-70122088 | MS.gene29611:intron | 30.0% | |
| TCAACTGGAATTAGTAGTTT+GGG | + | chr5.2:70123411-70123430 | MS.gene29611:CDS | 30.0% | |
| TGAAGAGTAAAATAGGGAAA+TGG | + | chr5.2:70120046-70120065 | MS.gene29611:intron | 30.0% | |
| TGCAAGAACATTGAATAACT+TGG | - | chr5.2:70122066-70122085 | None:intergenic | 30.0% | |
| TTACATTGAACTTGGTTTCA+GGG | - | chr5.2:70120626-70120645 | None:intergenic | 30.0% | |
| TTATTCTTTGTTCACAGGAA+AGG | + | chr5.2:70120997-70121016 | MS.gene29611:intron | 30.0% | |
| TTCACTGACGTATATACTAA+GGG | - | chr5.2:70123498-70123517 | None:intergenic | 30.0% | |
| TTTACATTGAACTTGGTTTC+AGG | - | chr5.2:70120627-70120646 | None:intergenic | 30.0% | |
| TTTCACTGACGTATATACTA+AGG | - | chr5.2:70123499-70123518 | None:intergenic | 30.0% | |
| ! | ACAAATTTAGATATGGTGGA+TGG | + | chr5.2:70122100-70122119 | MS.gene29611:CDS | 30.0% |
| ! | CTGGTTCAAGTTTCTTATTA+TGG | + | chr5.2:70119611-70119630 | MS.gene29611:CDS | 30.0% |
| ! | TTTGGTGGGAAATTCTTTTA+TGG | + | chr5.2:70119817-70119836 | MS.gene29611:intron | 30.0% |
| !! | GTTTTATTGCCTTGATTTGA+AGG | + | chr5.2:70120004-70120023 | MS.gene29611:intron | 30.0% |
| !!! | TTTTATTTTCATGAGTGCTG+AGG | + | chr5.2:70120938-70120957 | MS.gene29611:intron | 30.0% |
| AAATCAAACATTGCTCTCGT+TGG | + | chr5.2:70123247-70123266 | MS.gene29611:intron | 35.0% | |
| AACACCATCTAATCCAAAGA+AGG | - | chr5.2:70122746-70122765 | None:intergenic | 35.0% | |
| AACCTTGAATCAGTGAAACT+GGG | - | chr5.2:70119664-70119683 | None:intergenic | 35.0% | |
| AACTAATTAAGCTTGGAGCA+GGG | + | chr5.2:70121536-70121555 | MS.gene29611:intron | 35.0% | |
| AATGTCAGAAAGGAGAAAGA+CGG | - | chr5.2:70122571-70122590 | None:intergenic | 35.0% | |
| ACACATGCATCTTCTTTGTA+TGG | - | chr5.2:70123299-70123318 | None:intergenic | 35.0% | |
| AGGTCCTCATATAACAATGA+GGG | - | chr5.2:70121820-70121839 | None:intergenic | 35.0% | |
| ATACCAACGAATCTAACCAA+TGG | - | chr5.2:70121395-70121414 | None:intergenic | 35.0% | |
| ATTACCTTTAACCCATAACG+GGG | - | chr5.2:70122425-70122444 | None:intergenic | 35.0% | |
| ATTTGATCAACTACGGAGTT+CGG | + | chr5.2:70120457-70120476 | MS.gene29611:intron | 35.0% | |
| CAATGTACAGGCTGTAATAA+AGG | - | chr5.2:70122855-70122874 | None:intergenic | 35.0% | |
| CACAACAAGGACAAAATAAC+AGG | - | chr5.2:70121840-70121859 | None:intergenic | 35.0% | |
| CACATGCATCTTCTTTGTAT+GGG | - | chr5.2:70123298-70123317 | None:intergenic | 35.0% | |
| CTTTCAAAGTTAACTTACCC+TGG | + | chr5.2:70120860-70120879 | MS.gene29611:intron | 35.0% | |
| GAAAACATGCTATGATAGCT+AGG | - | chr5.2:70123028-70123047 | None:intergenic | 35.0% | |
| GTAAAGTCCAAATCTAGAGA+CGG | + | chr5.2:70121174-70121193 | MS.gene29611:CDS | 35.0% | |
| GTAGTTGATCAAATGATCAC+TGG | - | chr5.2:70120451-70120470 | None:intergenic | 35.0% | |
| GTTAGATTCGTTGGTATGTA+TGG | + | chr5.2:70121398-70121417 | MS.gene29611:intron | 35.0% | |
| GTTGAGGTTTGATATCAACA+CGG | + | chr5.2:70121209-70121228 | MS.gene29611:CDS | 35.0% | |
| TAACTAATTAAGCTTGGAGC+AGG | + | chr5.2:70121535-70121554 | MS.gene29611:intron | 35.0% | |
| TAGATTTGGACTTTACAACG+TGG | - | chr5.2:70121170-70121189 | None:intergenic | 35.0% | |
| TAGCACTAACCTTCAAATCA+AGG | - | chr5.2:70120016-70120035 | None:intergenic | 35.0% | |
| TAGCAGTTCAAACAAAGAAC+AGG | - | chr5.2:70121599-70121618 | None:intergenic | 35.0% | |
| TATCTCTCTGATCTGAACAT+GGG | - | chr5.2:70122007-70122026 | None:intergenic | 35.0% | |
| TGAAGTTCCATGCTAATGTT+AGG | + | chr5.2:70123198-70123217 | MS.gene29611:intron | 35.0% | |
| TGCAATATCTTCACAATTCC+TGG | - | chr5.2:70122368-70122387 | None:intergenic | 35.0% | |
| TGGAATTCGCATTTGATGTT+TGG | + | chr5.2:70121328-70121347 | MS.gene29611:CDS | 35.0% | |
| TTATCTCTCTGATCTGAACA+TGG | - | chr5.2:70122008-70122027 | None:intergenic | 35.0% | |
| TTGAGTCAGTACATATTGTG+TGG | + | chr5.2:70121100-70121119 | MS.gene29611:CDS | 35.0% | |
| TTGGGACTAAGATTCTGTTT+GGG | + | chr5.2:70119908-70119927 | MS.gene29611:intron | 35.0% | |
| TTGTTGTGGATCTAACTGAA+AGG | + | chr5.2:70121852-70121871 | MS.gene29611:intron | 35.0% | |
| TTTAGAAGACTTTCTGATGG+AGG | - | chr5.2:70121138-70121157 | None:intergenic | 35.0% | |
| TTTCAGTTAGATCCACAACA+AGG | - | chr5.2:70121853-70121872 | None:intergenic | 35.0% | |
| ! | CTTGATCTTGGCTGATTTAA+CGG | - | chr5.2:70119542-70119561 | None:intergenic | 35.0% |
| ! | TACTTTTATGCCTCTGCTTT+TGG | + | chr5.2:70121486-70121505 | MS.gene29611:intron | 35.0% |
| ! | TATAGATTGGAACGAGCTTT+TGG | + | chr5.2:70120127-70120146 | MS.gene29611:intron | 35.0% |
| ! | TTTGGGACTAAGATTCTGTT+TGG | + | chr5.2:70119907-70119926 | MS.gene29611:intron | 35.0% |
| !! | AATTTAGATATGGTGGATGG+TGG | + | chr5.2:70122103-70122122 | MS.gene29611:CDS | 35.0% |
| !!! | CTGTTATTTTGTCCTTGTTG+TGG | + | chr5.2:70121838-70121857 | MS.gene29611:intron | 35.0% |
| !!! | TGTTTTAGTTCCAAAAGCAG+AGG | - | chr5.2:70121499-70121518 | None:intergenic | 35.0% |
| AAGACTTTCTGATGGAGGAT+TGG | - | chr5.2:70121133-70121152 | None:intergenic | 40.0% | |
| ACAACTTGTCGCAAAACACT+GGG | - | chr5.2:70123129-70123148 | None:intergenic | 40.0% | |
| ACCATCTAATCCAAAGAAGG+AGG | - | chr5.2:70122743-70122762 | None:intergenic | 40.0% | |
| ACTAGCAGCTACTTAAAGCA+TGG | - | chr5.2:70121913-70121932 | None:intergenic | 40.0% | |
| ACTGGAATTAGTAGTTTGGG+AGG | + | chr5.2:70123414-70123433 | MS.gene29611:CDS | 40.0% | |
| AGACTTTCTGATGGAGGATT+GGG | - | chr5.2:70121132-70121151 | None:intergenic | 40.0% | |
| AGTGAAACTGGGAATTTGAG+GGG | - | chr5.2:70119653-70119672 | None:intergenic | 40.0% | |
| ATACGATACATATCCGACAC+CGG | - | chr5.2:70120212-70120231 | None:intergenic | 40.0% | |
| ATATCGTCCGTCTCTAGATT+TGG | - | chr5.2:70121184-70121203 | None:intergenic | 40.0% | |
| ATCTAATCCAAAGAAGGAGG+GGG | - | chr5.2:70122740-70122759 | None:intergenic | 40.0% | |
| ATGGGCGACATGTATTAACA+TGG | - | chr5.2:70123280-70123299 | None:intergenic | 40.0% | |
| ATGTCAGAAAGGAGAAAGAC+GGG | - | chr5.2:70122570-70122589 | None:intergenic | 40.0% | |
| CAGGTCCTCATATAACAATG+AGG | - | chr5.2:70121821-70121840 | None:intergenic | 40.0% | |
| CAGTGAAACTGGGAATTTGA+GGG | - | chr5.2:70119654-70119673 | None:intergenic | 40.0% | |
| CATCTAATCCAAAGAAGGAG+GGG | - | chr5.2:70122741-70122760 | None:intergenic | 40.0% | |
| CCATCTAATCCAAAGAAGGA+GGG | - | chr5.2:70122742-70122761 | None:intergenic | 40.0% | |
| CCTCATATAACAATGAGGGT+CGG | - | chr5.2:70121816-70121835 | None:intergenic | 40.0% | |
| CTAGGCATCATTGCACAATT+TGG | - | chr5.2:70123010-70123029 | None:intergenic | 40.0% | |
| GAACCTTGAATCAGTGAAAC+TGG | - | chr5.2:70119665-70119684 | None:intergenic | 40.0% | |
| GAGGAACTTCTGAACTAAAC+AGG | - | chr5.2:70122511-70122530 | None:intergenic | 40.0% | |
| GATCAGTAATTCGTAGCTGA+TGG | + | chr5.2:70120479-70120498 | MS.gene29611:intron | 40.0% | |
| GCATATATACTCCTCGGATT+AGG | + | chr5.2:70120180-70120199 | MS.gene29611:intron | 40.0% | |
| GTACATTGTCTCACCTTGTT+AGG | + | chr5.2:70123149-70123168 | MS.gene29611:intron | 40.0% | |
| TCAGTGAAACTGGGAATTTG+AGG | - | chr5.2:70119655-70119674 | None:intergenic | 40.0% | |
| TGGAAGTAGAAACGATTACC+TGG | + | chr5.2:70120396-70120415 | MS.gene29611:intron | 40.0% | |
| TTACCCTGGAATTAGAGAGA+GGG | + | chr5.2:70120874-70120893 | MS.gene29611:intron | 40.0% | |
| TTACCTTTAACCCATAACGG+GGG | - | chr5.2:70122424-70122443 | None:intergenic | 40.0% | |
| TTTCTTGTCGCAAATGCAAC+TGG | + | chr5.2:70122394-70122413 | MS.gene29611:CDS | 40.0% | |
| TTTGTGAAAGAATGCTGCCT+TGG | - | chr5.2:70122166-70122185 | None:intergenic | 40.0% | |
| ! | GACTCTTTTGTTCCTTTCTG+TGG | + | chr5.2:70122983-70123002 | MS.gene29611:intron | 40.0% |
| ! | GTGGATTTTGCCTTTGTTAC+AGG | + | chr5.2:70123369-70123388 | MS.gene29611:intron | 40.0% |
| ! | TGTCCATTGGTTAGATTCGT+TGG | + | chr5.2:70121389-70121408 | MS.gene29611:CDS | 40.0% |
| !! | ATAGTCGCAATGTCTGGTTT+TGG | + | chr5.2:70123526-70123545 | MS.gene29611:CDS | 40.0% |
| !! | ATATGTACTGACTCAAGTCG+AGG | - | chr5.2:70121096-70121115 | None:intergenic | 40.0% |
| !! | GTTTTGAGCTAGTGAAGTTG+AGG | - | chr5.2:70122530-70122549 | None:intergenic | 40.0% |
| !! | TTCCCAGTTTCACTGATTCA+AGG | + | chr5.2:70119659-70119678 | MS.gene29611:CDS | 40.0% |
| !!! | AGTGTGTTTTTGGTCAGTGT+TGG | + | chr5.2:70120509-70120528 | MS.gene29611:intron | 40.0% |
| !!! | GCTTTTGGTGTTGGGAATTT+TGG | + | chr5.2:70120142-70120161 | MS.gene29611:intron | 40.0% |
| !!! | GTGTGTTTTTGGTCAGTGTT+GGG | + | chr5.2:70120510-70120529 | MS.gene29611:intron | 40.0% |
| AATTCTTCCCCCTCCTTCTT+TGG | + | chr5.2:70122730-70122749 | MS.gene29611:intron | 45.0% | |
| ACAAATCCCACCATTGCATC+CGG | - | chr5.2:70121363-70121382 | None:intergenic | 45.0% | |
| ACGGACGATATGTGAAGTTG+AGG | + | chr5.2:70121193-70121212 | MS.gene29611:CDS | 45.0% | |
| AGGAACAAGAAGTCAAGGAC+TGG | - | chr5.2:70122835-70122854 | None:intergenic | 45.0% | |
| ATATAGCATGGTGCTCTCCA+AGG | + | chr5.2:70122146-70122165 | MS.gene29611:CDS | 45.0% | |
| CACAACTTGTCGCAAAACAC+TGG | - | chr5.2:70123130-70123149 | None:intergenic | 45.0% | |
| CCAGACATTGCGACTATCAA+CGG | - | chr5.2:70123523-70123542 | None:intergenic | 45.0% | |
| CCGACCCTCATTGTTATATG+AGG | + | chr5.2:70121813-70121832 | MS.gene29611:intron | 45.0% | |
| CTGAAGTCATGCTTGAGAGA+AGG | + | chr5.2:70120762-70120781 | MS.gene29611:intron | 45.0% | |
| CTTACCCTGGAATTAGAGAG+AGG | + | chr5.2:70120873-70120892 | MS.gene29611:intron | 45.0% | |
| GAAACCTCTGTTCAATCCGA+CGG | - | chr5.2:70119501-70119520 | None:intergenic | 45.0% | |
| GAATCTAACCAATGGACACG+AGG | - | chr5.2:70121387-70121406 | None:intergenic | 45.0% | |
| GATTTGTACCTCGTGTCCAT+TGG | + | chr5.2:70121376-70121395 | MS.gene29611:CDS | 45.0% | |
| GCACAATTTGGTCCACAGAA+AGG | - | chr5.2:70122998-70123017 | None:intergenic | 45.0% | |
| GGGGGAAACAAAACAGAATC+TGG | + | chr5.2:70120894-70120913 | MS.gene29611:intron | 45.0% | |
| GTCGGATTGAACAGAGGTTT+CGG | + | chr5.2:70119500-70119519 | MS.gene29611:CDS | 45.0% | |
| GTTTGGGAGGTCATAGTGAA+CGG | + | chr5.2:70123427-70123446 | MS.gene29611:CDS | 45.0% | |
| TACCCTGGAATTAGAGAGAG+GGG | + | chr5.2:70120875-70120894 | MS.gene29611:intron | 45.0% | |
| TACGATACATATCCGACACC+GGG | - | chr5.2:70120211-70120230 | None:intergenic | 45.0% | |
| TGATGTTTGGCAAAGTGCAC+CGG | + | chr5.2:70121341-70121360 | MS.gene29611:CDS | 45.0% | |
| TGGGGATTATGGCTGTTAGA+GGG | - | chr5.2:70121628-70121647 | None:intergenic | 45.0% | |
| TGTCATATTTCCCTGCTCTG+CGG | + | chr5.2:70121305-70121324 | MS.gene29611:CDS | 45.0% | |
| TTGGGGATTATGGCTGTTAG+AGG | - | chr5.2:70121629-70121648 | None:intergenic | 45.0% | |
| ! | CCCTCCTTCTTTGGATTAGA+TGG | + | chr5.2:70122739-70122758 | MS.gene29611:intron | 45.0% |
| ! | CTTCTCGCGTTTTCTTCTAC+TGG | + | chr5.2:70119592-70119611 | MS.gene29611:CDS | 45.0% |
| ! | GATCTTGGCTGATTTAACGG+TGG | - | chr5.2:70119539-70119558 | None:intergenic | 45.0% |
| !! | AGGTTTTATGCTGCCCATCA+TGG | + | chr5.2:70123218-70123237 | MS.gene29611:intron | 45.0% |
| !! | TTGGAACGAGCTTTTGGTGT+TGG | + | chr5.2:70120133-70120152 | MS.gene29611:intron | 45.0% |
| !!! | TGGAACGAGCTTTTGGTGTT+GGG | + | chr5.2:70120134-70120153 | MS.gene29611:intron | 45.0% |
| ACACTGGGTAGCATGGTCAT+TGG | - | chr5.2:70123114-70123133 | None:intergenic | 50.0% | |
| ACCCTGGAATTAGAGAGAGG+GGG | + | chr5.2:70120876-70120895 | MS.gene29611:intron | 50.0% | |
| GTGGACGGGTACATATAGCA+TGG | + | chr5.2:70122134-70122153 | MS.gene29611:CDS | 50.0% | |
| TCCCCCTCTCTCTAATTCCA+GGG | - | chr5.2:70120880-70120899 | None:intergenic | 50.0% | |
| TCGCAAAACACTGGGTAGCA+TGG | - | chr5.2:70123121-70123140 | None:intergenic | 50.0% | |
| TGAACCGTCGGATTGAACAG+AGG | + | chr5.2:70119494-70119513 | MS.gene29611:CDS | 50.0% | |
| TTCCCCCTCTCTCTAATTCC+AGG | - | chr5.2:70120881-70120900 | None:intergenic | 50.0% | |
| !! | CCGTTGATAGTCGCAATGTC+TGG | + | chr5.2:70123520-70123539 | MS.gene29611:CDS | 50.0% |
| AACTGGTGCACCCCCGTTAT+GGG | + | chr5.2:70122411-70122430 | MS.gene29611:CDS | 55.0% | |
| AAGTGCACCGGATGCAATGG+TGG | + | chr5.2:70121353-70121372 | MS.gene29611:CDS | 55.0% | |
| AGTGCACCGGATGCAATGGT+GGG | + | chr5.2:70121354-70121373 | MS.gene29611:CDS | 55.0% | |
| CATATTTCCCTGCTCTGCGG+TGG | + | chr5.2:70121308-70121327 | MS.gene29611:CDS | 55.0% | |
| GCAAAGTGCACCGGATGCAA+TGG | + | chr5.2:70121350-70121369 | MS.gene29611:CDS | 55.0% | |
| ! | ATGGTGGTCTGTGTGGTGGA+CGG | + | chr5.2:70122119-70122138 | MS.gene29611:CDS | 55.0% |
| ! | GCACCCCCGTTATGGGTTAA+AGG | + | chr5.2:70122418-70122437 | MS.gene29611:CDS | 55.0% |
| ! | GGAGCTGTTGGTTGAACCGT+CGG | + | chr5.2:70119482-70119501 | MS.gene29611:CDS | 55.0% |
| !! | ATGGTGGATGGTGGTCTGTG+TGG | + | chr5.2:70122112-70122131 | MS.gene29611:CDS | 55.0% |
| CAACTGGTGCACCCCCGTTA+TGG | + | chr5.2:70122410-70122429 | MS.gene29611:CDS | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | + | chr5.2:70120196-70120215 | MS.gene29611:intron | 60.0% | |
| GCGAATTCCACCGCAGAGCA+GGG | - | chr5.2:70121318-70121337 | None:intergenic | 60.0% | |
| TGCGAATTCCACCGCAGAGC+AGG | - | chr5.2:70121319-70121338 | None:intergenic | 60.0% | |
| ! | GTGGATGGTGGTCTGTGTGG+TGG | + | chr5.2:70122115-70122134 | MS.gene29611:CDS | 60.0% |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | + | chr5.2:70120190-70120209 | MS.gene29611:intron | 60.0% |
| !! | TGGTGGTCTGTGTGGTGGAC+GGG | + | chr5.2:70122120-70122139 | MS.gene29611:CDS | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | - | chr5.2:70120194-70120213 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 70119475 | 70123551 | 70119475 | ID=MS.gene29611 |
| chr5.2 | mRNA | 70119475 | 70123551 | 70119475 | ID=MS.gene29611.t1;Parent=MS.gene29611 |
| chr5.2 | exon | 70119475 | 70119680 | 70119475 | ID=MS.gene29611.t1.exon1;Parent=MS.gene29611.t1 |
| chr5.2 | CDS | 70119475 | 70119680 | 70119475 | ID=cds.MS.gene29611.t1;Parent=MS.gene29611.t1 |
| chr5.2 | exon | 70121014 | 70121410 | 70121014 | ID=MS.gene29611.t1.exon2;Parent=MS.gene29611.t1 |
| chr5.2 | CDS | 70121014 | 70121410 | 70121014 | ID=cds.MS.gene29611.t1;Parent=MS.gene29611.t1 |
| chr5.2 | exon | 70122087 | 70122250 | 70122087 | ID=MS.gene29611.t1.exon3;Parent=MS.gene29611.t1 |
| chr5.2 | CDS | 70122087 | 70122250 | 70122087 | ID=cds.MS.gene29611.t1;Parent=MS.gene29611.t1 |
| chr5.2 | exon | 70122369 | 70122439 | 70122369 | ID=MS.gene29611.t1.exon4;Parent=MS.gene29611.t1 |
| chr5.2 | CDS | 70122369 | 70122439 | 70122369 | ID=cds.MS.gene29611.t1;Parent=MS.gene29611.t1 |
| chr5.2 | exon | 70123391 | 70123551 | 70123391 | ID=MS.gene29611.t1.exon5;Parent=MS.gene29611.t1 |
| chr5.2 | CDS | 70123391 | 70123551 | 70123391 | ID=cds.MS.gene29611.t1;Parent=MS.gene29611.t1 |
| Gene Sequence |
| Protein sequence |
