AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32071


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32071.t1 MTR_1g072560 93.620 674 33 3 1 665 1 673 0.0 1154
MS.gene32071.t1 MTR_1g072560 93.141 554 28 3 1 545 1 553 0.0 924
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32071.t1 AT4G02880 57.655 307 117 2 354 660 263 556 3.34e-98 312
MS.gene32071.t1 AT4G02880 35.938 128 79 2 1 126 1 127 1.78e-13 73.9
MS.gene32071.t1 AT4G02880 57.655 307 117 2 354 660 259 552 3.40e-98 312
MS.gene32071.t1 AT4G02880 57.692 52 22 0 1 52 1 52 5.07e-13 72.4
MS.gene32071.t1 AT1G03290 58.478 289 115 1 371 659 231 514 2.99e-93 298
MS.gene32071.t1 AT1G03290 71.698 53 15 0 1 53 1 53 4.73e-17 85.1
MS.gene32071.t1 AT1G03290 58.478 289 115 1 371 659 253 536 8.18e-93 298
MS.gene32071.t1 AT1G03290 71.698 53 15 0 1 53 1 53 5.46e-17 85.1
MS.gene32071.t1 AT1G03290 58.478 289 115 1 371 659 283 566 1.54e-92 298
MS.gene32071.t1 AT1G03290 71.698 53 15 0 1 53 1 53 6.33e-17 85.1
MS.gene32071.t1 AT1G03290 58.478 289 115 1 371 659 283 566 1.54e-92 298
MS.gene32071.t1 AT1G03290 71.698 53 15 0 1 53 1 53 6.33e-17 85.1
MS.gene32071.t1 AT1G03290 58.478 289 115 1 371 659 283 566 1.54e-92 298
MS.gene32071.t1 AT1G03290 71.698 53 15 0 1 53 1 53 6.33e-17 85.1
MS.gene32071.t1 AT1G03290 58.478 289 115 1 371 659 283 566 1.54e-92 298
MS.gene32071.t1 AT1G03290 71.698 53 15 0 1 53 1 53 6.33e-17 85.1
MS.gene32071.t1 AT5G64980 63.043 46 17 0 1 46 1 46 1.83e-12 69.7
MS.gene32071.t1 AT5G64980 63.043 46 17 0 1 46 1 46 1.83e-12 69.7

Find 141 sgRNAs with CRISPR-Local

Find 299 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCATGCTGGGGAAATTTA+TGG 0.158311 1.2:+55425723 MS.gene32071:intron
TGAAGATGAAGGGGAGATTT+TGG 0.214160 1.2:+55424172 MS.gene32071:CDS
GGATGTCATTGTTGAAAATT+TGG 0.236630 1.2:+55424784 MS.gene32071:CDS
AGGAGACATCAAATGGATTT+TGG 0.242755 1.2:+55424723 MS.gene32071:CDS
AGTTGCATCTTAGCTTCTTC+TGG 0.265917 1.2:+55427218 MS.gene32071:CDS
TCCGGTGGTCGCTGCTATAT+TGG 0.280747 1.2:-55425517 None:intergenic
GTTGAAAATTTGGCATCTTC+AGG 0.284090 1.2:+55424794 MS.gene32071:CDS
TGCCTGTATAGGTGGATTCC+AGG 0.290736 1.2:+55423884 MS.gene32071:intron
TCAAACAGTGTCTCAAGTTC+AGG 0.292873 1.2:+55425027 MS.gene32071:CDS
TTATGGCGAAAAGGCAATTC+TGG 0.316460 1.2:+55425740 MS.gene32071:CDS
TCCCCACCATTGAAAACAAT+TGG 0.336636 1.2:-55427323 None:intergenic
TCATAAGCTTGTTAAAAGTA+TGG 0.338734 1.2:+55424199 MS.gene32071:CDS
GAGGGTTTGATATTCTAGAT+AGG 0.355256 1.2:+55425538 MS.gene32071:CDS
TACTGCAGGCTGGATTATAT+TGG 0.370799 1.2:-55425138 None:intergenic
ACACTCGAAGGATGCTGATA+TGG 0.376751 1.2:+55423930 MS.gene32071:CDS
GTTACTGTAACATTCAGATC+TGG 0.391606 1.2:-55424290 None:intergenic
TCACGTCTGTCCAGCTTGTC+TGG 0.392930 1.2:+55425786 MS.gene32071:CDS
TTCTTCACATTATGTACATC+GGG 0.399469 1.2:+55424235 MS.gene32071:CDS
AAATCTGCCAGCTCTTCTTC+TGG 0.403009 1.2:+55424266 MS.gene32071:CDS
GTAGCATTTATAAACCTTGA+AGG 0.403669 1.2:+55424335 MS.gene32071:CDS
CCCCACCATTGAAAACAATT+GGG 0.410851 1.2:-55427322 None:intergenic
TAAAAGTAGACTCACCTTCC+AGG 0.411888 1.2:-55424050 None:intergenic
TCAAGGTTTATAAATGCTAC+AGG 0.412424 1.2:-55424332 None:intergenic
AGAAATTTCTGTTATCTGTC+AGG 0.418878 1.2:+55427124 MS.gene32071:CDS
ATGAAACCAGTCAATTGCTT+GGG 0.419864 1.2:+55424651 MS.gene32071:CDS
GATGAGAGAGGTGGAACATC+AGG 0.426615 1.2:+55425476 MS.gene32071:CDS
TGAAAACAATTGGGGCTGCC+TGG 0.429019 1.2:-55427313 None:intergenic
TTCCAGGTTGTTGAGGGCAG+TGG 0.430937 1.2:+55423900 MS.gene32071:CDS
CCCTAGAGTCATAGTGAACC+TGG 0.434969 1.2:+55424032 MS.gene32071:CDS
CACAATGCTCTTATTGATGA+TGG 0.440539 1.2:+55427368 MS.gene32071:CDS
TACTTCCAGCATCCCCTTCA+CGG 0.443418 1.2:+55424001 MS.gene32071:CDS
CCAGGTTCACTATGACTCTA+GGG 0.446067 1.2:-55424032 None:intergenic
AAAATCCATTTGATGTCTCC+TGG 0.449566 1.2:-55424721 None:intergenic
TCAGGAGAAACTTGCAGAGC+AGG 0.457789 1.2:+55425494 MS.gene32071:CDS
GGTGGATTCCAGGTTGTTGA+GGG 0.458095 1.2:+55423894 MS.gene32071:intron
GAAAGTGAAAGTGAAGATGA+AGG 0.459096 1.2:+55424161 MS.gene32071:CDS
GTCCAGCTTGTCTGGTGAAA+GGG 0.461081 1.2:+55425794 MS.gene32071:CDS
GGCTGCGGAAGTTGTTCTTA+CGG 0.467393 1.2:+55423951 MS.gene32071:CDS
AAGAGCATTGTGTTCAGCCT+TGG 0.467976 1.2:-55427357 None:intergenic
GGTTTCATCATTTAACTCAC+TGG 0.469884 1.2:-55424636 None:intergenic
ATCCCTTTCACCAGACAAGC+TGG 0.471279 1.2:-55425796 None:intergenic
ATTTCCCAGGAGACATCAAA+TGG 0.472240 1.2:+55424716 MS.gene32071:CDS
TCCATTGCCATTGTTAGTCA+TGG 0.473377 1.2:-55424870 None:intergenic
TGTCCAGCTTGTCTGGTGAA+AGG 0.474114 1.2:+55425793 MS.gene32071:CDS
TGCCGATTCTTCTTGTGGAC+TGG 0.474130 1.2:+55424574 MS.gene32071:CDS
ATCCAGTCCACAAGAAGAAT+CGG 0.478136 1.2:-55424576 None:intergenic
CTGCGATACAAGTCACGGAT+TGG 0.483106 1.2:+55424961 MS.gene32071:CDS
TCTAGAACAAGAAGCAATGA+TGG 0.490819 1.2:+55426130 MS.gene32071:CDS
CTAATCGAGATTCAAGACTT+TGG 0.492088 1.2:-55426034 None:intergenic
CAAAACTGTGGCATCTAATG+TGG 0.495135 1.2:+55427250 MS.gene32071:CDS
TCCAGGTTCACTATGACTCT+AGG 0.497671 1.2:-55424033 None:intergenic
GATGAAACCAGTCAATTGCT+TGG 0.498096 1.2:+55424650 MS.gene32071:CDS
AGAAAGTGAACAAACCTTCA+AGG 0.498899 1.2:-55424349 None:intergenic
ATCTGGGCCAGAAGAAGAGC+TGG 0.501030 1.2:-55424273 None:intergenic
AATGATGGAGAAGGTAGTAC+AGG 0.501842 1.2:+55426145 MS.gene32071:CDS
TGGGTCGTCTTCATCATCAT+TGG 0.505413 1.2:+55424514 MS.gene32071:CDS
AAAGCGAGGATGAAGGGAAA+AGG 0.505775 1.2:+55424456 MS.gene32071:CDS
AAAGCTGCCGATTCTTCTTG+TGG 0.507371 1.2:+55424569 MS.gene32071:CDS
ATTTACCCCAAGCAATTGAC+TGG 0.507418 1.2:-55424657 None:intergenic
CCAACATCAGTATCTTCAAC+AGG 0.508842 1.2:-55424494 None:intergenic
CAACCTGCCCACGATCCATC+AGG 0.511341 1.2:-55426702 None:intergenic
TCAGATGAAAGCGAGGATGA+AGG 0.511685 1.2:+55424449 MS.gene32071:intron
AAAGTGAAAGTGAAGATGAA+GGG 0.512917 1.2:+55424162 MS.gene32071:CDS
ACTTCCAGCATCCCCTTCAC+GGG 0.513246 1.2:+55424002 MS.gene32071:CDS
GTATCCCGTGAAGGGGATGC+TGG 0.514200 1.2:-55424006 None:intergenic
AGGTGGATTCCAGGTTGTTG+AGG 0.514430 1.2:+55423893 MS.gene32071:intron
CTTCTTCACATTATGTACAT+CGG 0.516869 1.2:+55424234 MS.gene32071:CDS
GCCAATATAGCAGCGACCAC+CGG 0.517149 1.2:+55425516 MS.gene32071:CDS
GCAGCTTTGATGATTTGTAC+AGG 0.517673 1.2:-55424554 None:intergenic
AGGGTTTGATATTCTAGATA+GGG 0.517722 1.2:+55425539 MS.gene32071:CDS
AGAGTCTTCTGACTCGATCA+AGG 0.518967 1.2:-55424999 None:intergenic
TGGGGAAATTTATGGCGAAA+AGG 0.520761 1.2:+55425731 MS.gene32071:CDS
CAAACAGTGTCTCAAGTTCA+GGG 0.526735 1.2:+55425028 MS.gene32071:CDS
CAGATGAAAGCGAGGATGAA+GGG 0.528971 1.2:+55424450 MS.gene32071:intron
CGTGAGTTCCTGATGGATCG+TGG 0.534361 1.2:+55426694 MS.gene32071:CDS
AGCATATCAATACTGCAGGC+TGG 0.534938 1.2:-55425148 None:intergenic
GAAAACAATTGGGGCTGCCT+GGG 0.536146 1.2:-55427312 None:intergenic
TTGCTTGGGGTAAATAATGA+TGG 0.536969 1.2:+55424665 MS.gene32071:CDS
ACAGTTACGTGAGTTCCTGA+TGG 0.538443 1.2:+55426687 MS.gene32071:intron
AGCCACTGCCCTCAACAACC+TGG 0.540659 1.2:-55423902 None:intergenic
CTTGTTAAAAGTATGGATGT+TGG 0.543919 1.2:+55424206 MS.gene32071:CDS
TAGGGTTTGTATCCCGTGAA+GGG 0.545390 1.2:-55424014 None:intergenic
CTCAAGCATATCAATACTGC+AGG 0.545954 1.2:-55425152 None:intergenic
GTTCCTGATGGATCGTGGGC+AGG 0.547821 1.2:+55426699 MS.gene32071:CDS
TTACTGTAACATTCAGATCT+GGG 0.548270 1.2:-55424289 None:intergenic
AAAGATGCAGAACTGGACTC+TGG 0.555288 1.2:+55427407 MS.gene32071:CDS
TGCTCTTATTGATGATGGGT+GGG 0.557476 1.2:+55427373 MS.gene32071:CDS
ATCTAGAATATCAAACCCTC+CGG 0.557961 1.2:-55425535 None:intergenic
TTCTTTAGCGTGCACCAACA+TGG 0.558785 1.2:-55425577 None:intergenic
AAATCCATTTGATGTCTCCT+GGG 0.561238 1.2:-55424720 None:intergenic
CAAACAATCTGAATGAAGAG+TGG 0.561365 1.2:+55424897 MS.gene32071:CDS
GGAAGCTGAAGAGAATTCAA+AGG 0.561722 1.2:+55426187 MS.gene32071:CDS
TCCATGACTAACAATGGCAA+TGG 0.567732 1.2:+55424869 MS.gene32071:CDS
AATTCTGGCGACTGAGCTGA+AGG 0.568587 1.2:+55425755 MS.gene32071:CDS
AAACAATCTGAATGAAGAGT+GGG 0.568659 1.2:+55424898 MS.gene32071:CDS
TATCTCTAGTGAAATTTCCC+AGG 0.568889 1.2:+55424703 MS.gene32071:CDS
CAAGGTTTATAAATGCTACA+GGG 0.573009 1.2:-55424331 None:intergenic
ATTGATGAGAATACGACTCT+AGG 0.573030 1.2:+55425115 MS.gene32071:CDS
ACAGATAAATGTTGCAGAGG+AGG 0.573257 1.2:+55424841 MS.gene32071:CDS
GCTGTGAATGATTTGCTCAA+AGG 0.574101 1.2:-55427185 None:intergenic
TTCAGGTGTATATCACGTGT+TGG 0.574166 1.2:+55424811 MS.gene32071:CDS
ACAAGAAGCAATGATGGAGA+AGG 0.575425 1.2:+55426136 MS.gene32071:CDS
AAGTGAAAGTGAAGATGAAG+GGG 0.577481 1.2:+55424163 MS.gene32071:CDS
CTAGGGTTTGTATCCCGTGA+AGG 0.582518 1.2:-55424015 None:intergenic
GTCTCTTGCAATTCTTGATG+AGG 0.585007 1.2:+55425821 MS.gene32071:CDS
AGCAGAAATGTTGAGGAAAG+CGG 0.595016 1.2:+55426061 MS.gene32071:CDS
CGCTAAAGAAGCAAATGACA+TGG 0.595563 1.2:+55425590 MS.gene32071:CDS
GCATCATAATCTTCAGCCGT+AGG 0.597685 1.2:-55424932 None:intergenic
CTGTTGAAGATACTGATGTT+GGG 0.601353 1.2:+55424495 MS.gene32071:CDS
CCTGTTGAAGATACTGATGT+TGG 0.601909 1.2:+55424494 MS.gene32071:CDS
AGATTCCATTGATGAAAACA+AGG 0.603118 1.2:-55425442 None:intergenic
CCCACCATTGAAAACAATTG+GGG 0.604270 1.2:-55427321 None:intergenic
GTGAGTTCCTGATGGATCGT+GGG 0.605354 1.2:+55426695 MS.gene32071:CDS
CGAGGATGAAGGGAAAAGGT+TGG 0.606782 1.2:+55424460 MS.gene32071:CDS
ACAATGCTCTTATTGATGAT+GGG 0.607324 1.2:+55427369 MS.gene32071:CDS
GAAGGATGCTGATATGGCTG+CGG 0.608075 1.2:+55423936 MS.gene32071:CDS
AATATAGCAGCGACCACCGG+AGG 0.613783 1.2:+55425519 MS.gene32071:CDS
AGATGAGTATCAAGCCATGT+TGG 0.617399 1.2:+55425563 MS.gene32071:CDS
GCTGCTTCCATGACTAACAA+TGG 0.617805 1.2:+55424863 MS.gene32071:CDS
AGGGTTTGTATCCCGTGAAG+GGG 0.617974 1.2:-55424013 None:intergenic
TATCAACTTGATGAGAGAGG+TGG 0.618003 1.2:+55425467 MS.gene32071:CDS
GGAATCACGGAGACTACAGC+AGG 0.619130 1.2:+55426166 MS.gene32071:CDS
TAGCTGCAGCAGAAATGTTG+AGG 0.619883 1.2:+55426054 MS.gene32071:CDS
TAGAATATCAAACCCTCCGG+TGG 0.620228 1.2:-55425532 None:intergenic
CTGCAGTATTGATATGCTTG+AGG 0.622883 1.2:+55425153 MS.gene32071:CDS
AGAAGGTAGTACAGGAATCA+CGG 0.625668 1.2:+55426153 MS.gene32071:CDS
ATGCTCTTATTGATGATGGG+TGG 0.625789 1.2:+55427372 MS.gene32071:CDS
TGTATATCACGTGTTGGAGA+CGG 0.626009 1.2:+55424817 MS.gene32071:CDS
AGAGTCATAGTGAACCTGGA+AGG 0.630016 1.2:+55424036 MS.gene32071:CDS
AAAACTGTGGCATCTAATGT+GGG 0.641802 1.2:+55427251 MS.gene32071:CDS
AAACAGTGTCTCAAGTTCAG+GGG 0.648434 1.2:+55425029 MS.gene32071:CDS
TCTTATCAACTTGATGAGAG+AGG 0.649092 1.2:+55425464 MS.gene32071:CDS
TGAATCTTCAGATGAAAGCG+AGG 0.654788 1.2:+55424442 MS.gene32071:intron
TGGTTCATCCCACAAAACTG+TGG 0.661631 1.2:+55427238 MS.gene32071:CDS
ATATAGCAGCGACCACCGGA+GGG 0.663604 1.2:+55425520 MS.gene32071:CDS
AGTGGCTATTGAACACTCGA+AGG 0.665070 1.2:+55423918 MS.gene32071:CDS
GGAACAGATAAATGTTGCAG+AGG 0.665164 1.2:+55424838 MS.gene32071:CDS
TGGGGAAGAGGAGAGCTCCA+AGG 0.665274 1.2:+55427340 MS.gene32071:CDS
TGAAACCAGTCAATTGCTTG+GGG 0.667240 1.2:+55424652 MS.gene32071:CDS
ACTATCTGCGATACAAGTCA+CGG 0.668223 1.2:+55424956 MS.gene32071:CDS
TGAAGTACTCAAGATCACCC+AGG 0.679720 1.2:+55427295 MS.gene32071:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGTAGATTTAATAAATT+TGG - chr1.2:55427086-55427105 None:intergenic 10.0%
!! AATTAAAAATCATTAAACAA+TGG - chr1.2:55426645-55426664 None:intergenic 10.0%
!! ATTAAAAATCATTAAACAAT+GGG - chr1.2:55426644-55426663 None:intergenic 10.0%
!! TAATATCTCTTTAATATATT+TGG - chr1.2:55423802-55423821 None:intergenic 10.0%
!! TATTAAATTATTCAAAACAA+TGG - chr1.2:55425305-55425324 None:intergenic 10.0%
!!! ATTTTTAAAATAACTTTTAG+TGG + chr1.2:55426389-55426408 MS.gene32071:intron 10.0%
!!! TTTTTAAAATAACTTTTAGT+GGG + chr1.2:55426390-55426409 MS.gene32071:intron 10.0%
!! ATAACTATTACTTTCTTATT+GGG + chr1.2:55423430-55423449 MS.gene32071:intron 15.0%
!! ATTTCACTGTTATTATTTAA+TGG + chr1.2:55425960-55425979 MS.gene32071:intron 15.0%
!! TAATCAAAATTACACTAATA+AGG - chr1.2:55426869-55426888 None:intergenic 15.0%
!! TATAACTATTACTTTCTTAT+TGG + chr1.2:55423429-55423448 MS.gene32071:intron 15.0%
!! TTAAAAATCATTAAACAATG+GGG - chr1.2:55426643-55426662 None:intergenic 15.0%
!! TTTACAGAAATATAATGAAA+TGG - chr1.2:55426239-55426258 None:intergenic 15.0%
!!! TATTAGTGTAATTTTGATTA+TGG + chr1.2:55426869-55426888 MS.gene32071:intron 15.0%
!! AGAAATATAATGAAATGGTT+TGG - chr1.2:55426234-55426253 None:intergenic 20.0%
!! AGTTCTATCAAATATAAGTA+AGG - chr1.2:55425263-55425282 None:intergenic 20.0%
!! ATCTACAATCATAATTGAAT+AGG - chr1.2:55422977-55422996 None:intergenic 20.0%
!! TAAAAGAACTCTTTCATATA+TGG - chr1.2:55426265-55426284 None:intergenic 20.0%
!! TAAACAATAATACTAACTTG+AGG + chr1.2:55423343-55423362 MS.gene32071:intron 20.0%
!! TAAATCAAAATGAACAGATA+GGG - chr1.2:55426921-55426940 None:intergenic 20.0%
!! TAACTATTACTTTCTTATTG+GGG + chr1.2:55423431-55423450 MS.gene32071:intron 20.0%
!! TATTAAAGAGATATTACACT+AGG + chr1.2:55423806-55423825 MS.gene32071:intron 20.0%
!! TTTGATAGAACTTATGAAAT+TGG + chr1.2:55425271-55425290 MS.gene32071:intron 20.0%
!!! AGTAATTTTTTAGAAATTGC+TGG - chr1.2:55423985-55424004 None:intergenic 20.0%
!!! ATCATGTTTTATTTGTATTC+TGG + chr1.2:55423055-55423074 MS.gene32071:intron 20.0%
!!! GTAATTTTTTAGAAATTGCT+GGG - chr1.2:55423984-55424003 None:intergenic 20.0%
!!! TAAATTTAACTTTCTACCTA+AGG + chr1.2:55423143-55423162 MS.gene32071:intron 20.0%
!!! TGTAAATATTATTTTCTTCC+TGG + chr1.2:55426769-55426788 MS.gene32071:intron 20.0%
! AACTATTACTTTCTTATTGG+GGG + chr1.2:55423432-55423451 MS.gene32071:intron 25.0%
! AAGCAAGTCAATTTACAATT+AGG - chr1.2:55423532-55423551 None:intergenic 25.0%
! AGCAAGTCAATTTACAATTA+GGG - chr1.2:55423531-55423550 None:intergenic 25.0%
! ATATTGGTCCTTTAATCTTT+AGG + chr1.2:55426302-55426321 MS.gene32071:intron 25.0%
! ATTAGAATGTGAACTATTCA+AGG + chr1.2:55423648-55423667 MS.gene32071:intron 25.0%
! CCAATTGAAGTTAACAAATT+CGG - chr1.2:55423083-55423102 None:intergenic 25.0%
! GAATTACAAGGAAAAGATAA+GGG + chr1.2:55426439-55426458 MS.gene32071:intron 25.0%
! GCATCCAAATATAAGAAAAT+AGG - chr1.2:55425219-55425238 None:intergenic 25.0%
! GTAAATCAAAATGAACAGAT+AGG - chr1.2:55426922-55426941 None:intergenic 25.0%
! TATATGACACTTGAGATTAT+CGG + chr1.2:55423493-55423512 MS.gene32071:intron 25.0%
! TATTGGTCCTTTAATCTTTA+GGG + chr1.2:55426303-55426322 MS.gene32071:intron 25.0%
! TGTGTATAGTAAGTTCATAT+TGG + chr1.2:55426286-55426305 MS.gene32071:intron 25.0%
! TGTTTAATCATACAATCCTT+AGG - chr1.2:55423162-55423181 None:intergenic 25.0%
! TTTCTGACTGTAACAAATTT+AGG + chr1.2:55423704-55423723 MS.gene32071:intron 25.0%
!! CAGTCCTATTTTCTTATATT+TGG + chr1.2:55425212-55425231 MS.gene32071:intron 25.0%
!!! CGAATTTGTTAACTTCAATT+GGG + chr1.2:55423081-55423100 MS.gene32071:intron 25.0%
!!! TCATAAGCTTGTTAAAAGTA+TGG + chr1.2:55424199-55424218 MS.gene32071:CDS 25.0%
!!! TGATGTTTTTTTAGACATGA+TGG + chr1.2:55425668-55425687 MS.gene32071:intron 25.0%
AAACAATCTGAATGAAGAGT+GGG + chr1.2:55424898-55424917 MS.gene32071:CDS 30.0%
AAAGCAAGCTATTTAGAGAA+TGG - chr1.2:55424094-55424113 None:intergenic 30.0%
AAAGCTTGAAAAAGAGGAAT+CGG + chr1.2:55426094-55426113 MS.gene32071:CDS 30.0%
AAAGTGAAAGTGAAGATGAA+GGG + chr1.2:55424162-55424181 MS.gene32071:CDS 30.0%
AAGCTATTTAGAGAATGGTA+TGG - chr1.2:55424089-55424108 None:intergenic 30.0%
AATCCTGTTTCAGTATAACT+TGG + chr1.2:55426954-55426973 MS.gene32071:intron 30.0%
ACTAAAAACATAGGGAACTT+GGG - chr1.2:55423205-55423224 None:intergenic 30.0%
AGAAATTTCTGTTATCTGTC+AGG + chr1.2:55427124-55427143 MS.gene32071:CDS 30.0%
AGATTCCATTGATGAAAACA+AGG - chr1.2:55425445-55425464 None:intergenic 30.0%
AGGGTTTGATATTCTAGATA+GGG + chr1.2:55425539-55425558 MS.gene32071:CDS 30.0%
ATACTGAAACAGGATTTCTA+GGG - chr1.2:55426950-55426969 None:intergenic 30.0%
ATTGAATAGGTATGTATACC+TGG - chr1.2:55422964-55422983 None:intergenic 30.0%
ATTGGTCCTTTAATCTTTAG+GGG + chr1.2:55426304-55426323 MS.gene32071:intron 30.0%
CAAGGTTTATAAATGCTACA+GGG - chr1.2:55424334-55424353 None:intergenic 30.0%
CCAATCGTTAACTAATCTAT+AGG - chr1.2:55426573-55426592 None:intergenic 30.0%
CCAGAAAACACTTTAATTGT+AGG + chr1.2:55423375-55423394 MS.gene32071:intron 30.0%
CGATGAAGCAAAAACAAATA+AGG + chr1.2:55425183-55425202 MS.gene32071:CDS 30.0%
CTTCTTCACATTATGTACAT+CGG + chr1.2:55424234-55424253 MS.gene32071:CDS 30.0%
GGAATTACAAGGAAAAGATA+AGG + chr1.2:55426438-55426457 MS.gene32071:intron 30.0%
GGATGTCATTGTTGAAAATT+TGG + chr1.2:55424784-55424803 MS.gene32071:CDS 30.0%
GTAGCATTTATAAACCTTGA+AGG + chr1.2:55424335-55424354 MS.gene32071:CDS 30.0%
TATACTGAAACAGGATTTCT+AGG - chr1.2:55426951-55426970 None:intergenic 30.0%
TATCCAAGTTATACTGAAAC+AGG - chr1.2:55426960-55426979 None:intergenic 30.0%
TCAAGGTTTATAAATGCTAC+AGG - chr1.2:55424335-55424354 None:intergenic 30.0%
TTACTGTAACATTCAGATCT+GGG - chr1.2:55424292-55424311 None:intergenic 30.0%
TTCAAACGCTATAATTGCAT+GGG - chr1.2:55423228-55423247 None:intergenic 30.0%
TTCTTCACATTATGTACATC+GGG + chr1.2:55424235-55424254 MS.gene32071:CDS 30.0%
TTGAATAGGTATGTATACCT+GGG - chr1.2:55422963-55422982 None:intergenic 30.0%
TTTCAAACGCTATAATTGCA+TGG - chr1.2:55423229-55423248 None:intergenic 30.0%
! ACAATGCTCTTATTGATGAT+GGG + chr1.2:55427369-55427388 MS.gene32071:CDS 30.0%
! ACTAATCTATAGGCTTTGAT+TGG - chr1.2:55426563-55426582 None:intergenic 30.0%
! CCTATAGATTAGTTAACGAT+TGG + chr1.2:55426570-55426589 MS.gene32071:intron 30.0%
! CTAATCTATAGGCTTTGATT+GGG - chr1.2:55426562-55426581 None:intergenic 30.0%
! CTTGTTAAAAGTATGGATGT+TGG + chr1.2:55424206-55424225 MS.gene32071:CDS 30.0%
! TGTTGCTTATAGTCGTTATT+GGG + chr1.2:55423279-55423298 MS.gene32071:intron 30.0%
! TTGAGATTATCGGATTTTCA+AGG + chr1.2:55423503-55423522 MS.gene32071:intron 30.0%
! TTGTTGCTTATAGTCGTTAT+TGG + chr1.2:55423278-55423297 MS.gene32071:intron 30.0%
!! AGCGAATGAATTTAGCTTTA+TGG - chr1.2:55426521-55426540 None:intergenic 30.0%
!! AGCTAGTGAAAATTTTGATC+AGG + chr1.2:55424751-55424770 MS.gene32071:CDS 30.0%
!! AGTATTGATAGTTCAATACC+AGG - chr1.2:55426790-55426809 None:intergenic 30.0%
!! CCGAATTTGTTAACTTCAAT+TGG + chr1.2:55423080-55423099 MS.gene32071:intron 30.0%
!! CCTACAATTAAAGTGTTTTC+TGG - chr1.2:55423378-55423397 None:intergenic 30.0%
!! CTAAATAGCTTGCTTTGAAA+CGG + chr1.2:55424098-55424117 MS.gene32071:intron 30.0%
!! CTTTTTGTTTAACTTTGCAG+AGG + chr1.2:55427101-55427120 MS.gene32071:intron 30.0%
!! GCTAGTGAAAATTTTGATCA+GGG + chr1.2:55424752-55424771 MS.gene32071:CDS 30.0%
!!! ATTTGTTTTTGCTTCATCGA+TGG - chr1.2:55425182-55425201 None:intergenic 30.0%
!!! GAAAACCTTGTTTTCATCAA+TGG + chr1.2:55425437-55425456 MS.gene32071:intron 30.0%
AAAACTGTGGCATCTAATGT+GGG + chr1.2:55427251-55427270 MS.gene32071:CDS 35.0%
AAAATCCATTTGATGTCTCC+TGG - chr1.2:55424724-55424743 None:intergenic 35.0%
AAATCCATTTGATGTCTCCT+GGG - chr1.2:55424723-55424742 None:intergenic 35.0%
AAGAAGCAAATGACATGGTT+CGG + chr1.2:55425595-55425614 MS.gene32071:intron 35.0%
AAGTGAAAGTGAAGATGAAG+GGG + chr1.2:55424163-55424182 MS.gene32071:CDS 35.0%
ACGTAACTGTAAAGATGAGA+AGG - chr1.2:55426677-55426696 None:intergenic 35.0%
AGAAAGTGAACAAACCTTCA+AGG - chr1.2:55424352-55424371 None:intergenic 35.0%
ATACAGGCAAAGAAAGAAAC+AGG - chr1.2:55423873-55423892 None:intergenic 35.0%
ATGAAACCAGTCAATTGCTT+GGG + chr1.2:55424651-55424670 MS.gene32071:CDS 35.0%
ATTACTTTCTTATTGGGGGA+TGG + chr1.2:55423436-55423455 MS.gene32071:intron 35.0%
ATTGATGAGAATACGACTCT+AGG + chr1.2:55425115-55425134 MS.gene32071:CDS 35.0%
CAAACAATCTGAATGAAGAG+TGG + chr1.2:55424897-55424916 MS.gene32071:CDS 35.0%
CACAATGCTCTTATTGATGA+TGG + chr1.2:55427368-55427387 MS.gene32071:CDS 35.0%
CTAATCGAGATTCAAGACTT+TGG - chr1.2:55426037-55426056 None:intergenic 35.0%
CTGTTGAAGATACTGATGTT+GGG + chr1.2:55424495-55424514 MS.gene32071:CDS 35.0%
GAAAGTGAAAGTGAAGATGA+AGG + chr1.2:55424161-55424180 MS.gene32071:CDS 35.0%
GACTAAAAACATAGGGAACT+TGG - chr1.2:55423206-55423225 None:intergenic 35.0%
GACTCTAAACTGGGTAAATA+TGG - chr1.2:55426600-55426619 None:intergenic 35.0%
GAGATATTACACTAGGAATG+TGG + chr1.2:55423813-55423832 MS.gene32071:intron 35.0%
GAGGGTTTGATATTCTAGAT+AGG + chr1.2:55425538-55425557 MS.gene32071:CDS 35.0%
GCTTGAAAAGCTTGAAAAAG+AGG + chr1.2:55426088-55426107 MS.gene32071:CDS 35.0%
GGTTTCATCATTTAACTCAC+TGG - chr1.2:55424639-55424658 None:intergenic 35.0%
GTTACTGTAACATTCAGATC+TGG - chr1.2:55424293-55424312 None:intergenic 35.0%
GTTGAAAATTTGGCATCTTC+AGG + chr1.2:55424794-55424813 MS.gene32071:CDS 35.0%
GTTTCTTTCTTTGCCTGTAT+AGG + chr1.2:55423873-55423892 MS.gene32071:intron 35.0%
TATCTCTAGTGAAATTTCCC+AGG + chr1.2:55424703-55424722 MS.gene32071:CDS 35.0%
TCTCAACCCCTAAAGATTAA+AGG - chr1.2:55426313-55426332 None:intergenic 35.0%
TCTTATCAACTTGATGAGAG+AGG + chr1.2:55425464-55425483 MS.gene32071:CDS 35.0%
TGAATAGGTATGTATACCTG+GGG - chr1.2:55422962-55422981 None:intergenic 35.0%
TGCATGGGACTAAAAACATA+GGG - chr1.2:55423213-55423232 None:intergenic 35.0%
TGGAATGGTTACATCAATCA+TGG + chr1.2:55423456-55423475 MS.gene32071:intron 35.0%
TTGAGATCCTCTCCATTTAA+TGG + chr1.2:55426327-55426346 MS.gene32071:intron 35.0%
TTGCATGGGACTAAAAACAT+AGG - chr1.2:55423214-55423233 None:intergenic 35.0%
TTGCTTGGGGTAAATAATGA+TGG + chr1.2:55424665-55424684 MS.gene32071:CDS 35.0%
TTGTCTCTGCAACATTCTAT+TGG + chr1.2:55426810-55426829 MS.gene32071:intron 35.0%
! ATACCTTGCTTGCTTTGAAT+TGG + chr1.2:55424392-55424411 MS.gene32071:intron 35.0%
! ATCTAGAATATCAAACCCTC+CGG - chr1.2:55425538-55425557 None:intergenic 35.0%
! ATTTAATGGACACTCCCATT+TGG + chr1.2:55426341-55426360 MS.gene32071:intron 35.0%
! TCTAGAACAAGAAGCAATGA+TGG + chr1.2:55426130-55426149 MS.gene32071:CDS 35.0%
! TTTTGACAAAGATGCAGAAC+TGG + chr1.2:55427400-55427419 MS.gene32071:CDS 35.0%
!! AAATGGGAGTGTCCATTAAA+TGG - chr1.2:55426342-55426361 None:intergenic 35.0%
!! AATACACGTTGGCTTTGATT+GGG + chr1.2:55426417-55426436 MS.gene32071:intron 35.0%
!! ACTTTTTATTTGCAGCATGC+TGG + chr1.2:55425711-55425730 MS.gene32071:intron 35.0%
!! AGGAGACATCAAATGGATTT+TGG + chr1.2:55424723-55424742 MS.gene32071:CDS 35.0%
!! ATTAGATGCCACAGTTTTGT+GGG - chr1.2:55427249-55427268 None:intergenic 35.0%
!! CTTTTTATTTGCAGCATGCT+GGG + chr1.2:55425712-55425731 MS.gene32071:intron 35.0%
!! TAATACACGTTGGCTTTGAT+TGG + chr1.2:55426416-55426435 MS.gene32071:intron 35.0%
!! TACTGTGTTGACTCTAAACT+GGG - chr1.2:55426609-55426628 None:intergenic 35.0%
!! TTTTTATTTGCAGCATGCTG+GGG + chr1.2:55425713-55425732 MS.gene32071:intron 35.0%
!!! TAGTGGGTTTTAATACACGT+TGG + chr1.2:55426406-55426425 MS.gene32071:intron 35.0%
AAACAGTGTCTCAAGTTCAG+GGG + chr1.2:55425029-55425048 MS.gene32071:CDS 40.0%
AAGAAGCAGGTATCAGTAAC+AGG - chr1.2:55423843-55423862 None:intergenic 40.0%
ACACCAATTCAAAGCAAGCA+AGG - chr1.2:55424398-55424417 None:intergenic 40.0%
ACAGATAAATGTTGCAGAGG+AGG + chr1.2:55424841-55424860 MS.gene32071:CDS 40.0%
ACTATCTGCGATACAAGTCA+CGG + chr1.2:55424956-55424975 MS.gene32071:CDS 40.0%
AGAAGGTAGTACAGGAATCA+CGG + chr1.2:55426153-55426172 MS.gene32071:CDS 40.0%
AGATGAGTATCAAGCCATGT+TGG + chr1.2:55425563-55425582 MS.gene32071:CDS 40.0%
AGCAGAAATGTTGAGGAAAG+CGG + chr1.2:55426061-55426080 MS.gene32071:CDS 40.0%
AGCGATAGAAGACTTATTCG+TGG - chr1.2:55423774-55423793 None:intergenic 40.0%
AGTTGCATCTTAGCTTCTTC+TGG + chr1.2:55427218-55427237 MS.gene32071:CDS 40.0%
ATCCAGTCCACAAGAAGAAT+CGG - chr1.2:55424579-55424598 None:intergenic 40.0%
ATTGGGAGTTAGGAAAGGAA+TGG - chr1.2:55426545-55426564 None:intergenic 40.0%
ATTTACCCCAAGCAATTGAC+TGG - chr1.2:55424660-55424679 None:intergenic 40.0%
ATTTCCCAGGAGACATCAAA+TGG + chr1.2:55424716-55424735 MS.gene32071:CDS 40.0%
CAAAACTGTGGCATCTAATG+TGG + chr1.2:55427250-55427269 MS.gene32071:CDS 40.0%
CAAACAGTGTCTCAAGTTCA+GGG + chr1.2:55425028-55425047 MS.gene32071:CDS 40.0%
CAAAGCAAGCAAGGTATAGA+TGG - chr1.2:55424389-55424408 None:intergenic 40.0%
CATTGTCTCTCTCTCCAAAT+GGG - chr1.2:55426358-55426377 None:intergenic 40.0%
CCAACATCAGTATCTTCAAC+AGG - chr1.2:55424497-55424516 None:intergenic 40.0%
CCCACCATTGAAAACAATTG+GGG - chr1.2:55427324-55427343 None:intergenic 40.0%
CCCCACCATTGAAAACAATT+GGG - chr1.2:55427325-55427344 None:intergenic 40.0%
CCTGTTGAAGATACTGATGT+TGG + chr1.2:55424494-55424513 MS.gene32071:CDS 40.0%
CGCTAAAGAAGCAAATGACA+TGG + chr1.2:55425590-55425609 MS.gene32071:CDS 40.0%
CTCAAGCATATCAATACTGC+AGG - chr1.2:55425155-55425174 None:intergenic 40.0%
CTTTGATTGGGAGTTAGGAA+AGG - chr1.2:55426550-55426569 None:intergenic 40.0%
GATGAAACCAGTCAATTGCT+TGG + chr1.2:55424650-55424669 MS.gene32071:CDS 40.0%
GGAACAGATAAATGTTGCAG+AGG + chr1.2:55424838-55424857 MS.gene32071:CDS 40.0%
GGAAGCTGAAGAGAATTCAA+AGG + chr1.2:55426187-55426206 MS.gene32071:CDS 40.0%
GTCTCTTGCAATTCTTGATG+AGG + chr1.2:55425821-55425840 MS.gene32071:CDS 40.0%
TAAAAGTAGACTCACCTTCC+AGG - chr1.2:55424053-55424072 None:intergenic 40.0%
TACTGCAGGCTGGATTATAT+TGG - chr1.2:55425141-55425160 None:intergenic 40.0%
TATCAACTTGATGAGAGAGG+TGG + chr1.2:55425467-55425486 MS.gene32071:CDS 40.0%
TATTACACTAGGAATGTGGC+TGG + chr1.2:55423817-55423836 MS.gene32071:intron 40.0%
TCAAACAGTGTCTCAAGTTC+AGG + chr1.2:55425027-55425046 MS.gene32071:CDS 40.0%
TCATTGTCTCTCTCTCCAAA+TGG - chr1.2:55426359-55426378 None:intergenic 40.0%
TCCATGACTAACAATGGCAA+TGG + chr1.2:55424869-55424888 MS.gene32071:CDS 40.0%
TCCATTGCCATTGTTAGTCA+TGG - chr1.2:55424873-55424892 None:intergenic 40.0%
TCCCCACCATTGAAAACAAT+TGG - chr1.2:55427326-55427345 None:intergenic 40.0%
TCTTTCCGACTAACTGAGAT+CGG + chr1.2:55425933-55425952 MS.gene32071:intron 40.0%
TCTTTCTTTGCCTGTATAGG+TGG + chr1.2:55423876-55423895 MS.gene32071:intron 40.0%
TGAAAAAGAGGAATCGGCAA+GGG + chr1.2:55426100-55426119 MS.gene32071:CDS 40.0%
TGAAACCAGTCAATTGCTTG+GGG + chr1.2:55424652-55424671 MS.gene32071:CDS 40.0%
TGAATCTTCAGATGAAAGCG+AGG + chr1.2:55424442-55424461 MS.gene32071:intron 40.0%
TGATTCCGATCTCAGTTAGT+CGG - chr1.2:55425941-55425960 None:intergenic 40.0%
TGGGGAAATTTATGGCGAAA+AGG + chr1.2:55425731-55425750 MS.gene32071:CDS 40.0%
TGTATATCACGTGTTGGAGA+CGG + chr1.2:55424817-55424836 MS.gene32071:CDS 40.0%
TTAGAGTCAACACAGTAGTG+AGG + chr1.2:55426612-55426631 MS.gene32071:intron 40.0%
TTATGGCGAAAAGGCAATTC+TGG + chr1.2:55425740-55425759 MS.gene32071:CDS 40.0%
TTCAGGTGTATATCACGTGT+TGG + chr1.2:55424811-55424830 MS.gene32071:CDS 40.0%
TTGAAAAAGAGGAATCGGCA+AGG + chr1.2:55426099-55426118 MS.gene32071:CDS 40.0%
TTGGGAGTTAGGAAAGGAAT+GGG - chr1.2:55426544-55426563 None:intergenic 40.0%
TTTCTTATTGGGGGATGGAA+TGG + chr1.2:55423441-55423460 MS.gene32071:intron 40.0%
! AATGATGGAGAAGGTAGTAC+AGG + chr1.2:55426145-55426164 MS.gene32071:CDS 40.0%
! ACAAGAAGCAATGATGGAGA+AGG + chr1.2:55426136-55426155 MS.gene32071:CDS 40.0%
! ATAGGCTTTGATTGGGAGTT+AGG - chr1.2:55426555-55426574 None:intergenic 40.0%
! ATGAAATGGTTTGGAAGCAG+AGG - chr1.2:55426225-55426244 None:intergenic 40.0%
! CATTAGATGCCACAGTTTTG+TGG - chr1.2:55427250-55427269 None:intergenic 40.0%
! CCCAATTGTTTTCAATGGTG+GGG + chr1.2:55427322-55427341 MS.gene32071:CDS 40.0%
! CCCCAATTGTTTTCAATGGT+GGG + chr1.2:55427321-55427340 MS.gene32071:CDS 40.0%
! GCAGCTTTGATGATTTGTAC+AGG - chr1.2:55424557-55424576 None:intergenic 40.0%
! GGCTTTGATTGGGAATTACA+AGG + chr1.2:55426427-55426446 MS.gene32071:intron 40.0%
! GTGGGTAGATTTTGTTCCTA+CGG + chr1.2:55424916-55424935 MS.gene32071:CDS 40.0%
! TGAAGATGAAGGGGAGATTT+TGG + chr1.2:55424172-55424191 MS.gene32071:CDS 40.0%
! TTTGCTCGATATTTTTCCCC+AGG + chr1.2:55422943-55422962 MS.gene32071:CDS 40.0%
!! ATGCTCTTATTGATGATGGG+TGG + chr1.2:55427372-55427391 MS.gene32071:CDS 40.0%
!! CTACTGTGTTGACTCTAAAC+TGG - chr1.2:55426610-55426629 None:intergenic 40.0%
!! CTGCAGTATTGATATGCTTG+AGG + chr1.2:55425153-55425172 MS.gene32071:CDS 40.0%
!! GCTGTGAATGATTTGCTCAA+AGG - chr1.2:55427188-55427207 None:intergenic 40.0%
!! TGCTCTTATTGATGATGGGT+GGG + chr1.2:55427373-55427392 MS.gene32071:CDS 40.0%
!!! GGTTTTGGAATTTGCAAGGT+CGG + chr1.2:55423316-55423335 MS.gene32071:intron 40.0%
AAAGATGCAGAACTGGACTC+TGG + chr1.2:55427407-55427426 MS.gene32071:CDS 45.0%
AAAGCGAGGATGAAGGGAAA+AGG + chr1.2:55424456-55424475 MS.gene32071:CDS 45.0%
AAATCTGCCAGCTCTTCTTC+TGG + chr1.2:55424266-55424285 MS.gene32071:CDS 45.0%
AACCTGGAATCCACCTATAC+AGG - chr1.2:55423889-55423908 None:intergenic 45.0%
ACACTCGAAGGATGCTGATA+TGG + chr1.2:55423930-55423949 MS.gene32071:CDS 45.0%
ACAGTTACGTGAGTTCCTGA+TGG + chr1.2:55426687-55426706 MS.gene32071:intron 45.0%
AGAGTCATAGTGAACCTGGA+AGG + chr1.2:55424036-55424055 MS.gene32071:CDS 45.0%
AGCATATCAATACTGCAGGC+TGG - chr1.2:55425151-55425170 None:intergenic 45.0%
AGTGGCTATTGAACACTCGA+AGG + chr1.2:55423918-55423937 MS.gene32071:CDS 45.0%
AGTTAGTCGGAAAGATGCTC+GGG - chr1.2:55425928-55425947 None:intergenic 45.0%
CAAAATAGACCTCCCATGCA+AGG - chr1.2:55426496-55426515 None:intergenic 45.0%
CAGATGAAAGCGAGGATGAA+GGG + chr1.2:55424450-55424469 MS.gene32071:intron 45.0%
CAGCATGCTGGGGAAATTTA+TGG + chr1.2:55425723-55425742 MS.gene32071:intron 45.0%
CAGTTAGTCGGAAAGATGCT+CGG - chr1.2:55425929-55425948 None:intergenic 45.0%
CCAGGTTCACTATGACTCTA+GGG - chr1.2:55424035-55424054 None:intergenic 45.0%
GCATCATAATCTTCAGCCGT+AGG - chr1.2:55424935-55424954 None:intergenic 45.0%
GCTGCTTCCATGACTAACAA+TGG + chr1.2:55424863-55424882 MS.gene32071:CDS 45.0%
GGAAAAGATAAGGGAGCAGA+AGG + chr1.2:55426448-55426467 MS.gene32071:intron 45.0%
TAGAATATCAAACCCTCCGG+TGG - chr1.2:55425535-55425554 None:intergenic 45.0%
TAGCTGCAGCAGAAATGTTG+AGG + chr1.2:55426054-55426073 MS.gene32071:CDS 45.0%
TAGGGTTTGTATCCCGTGAA+GGG - chr1.2:55424017-55424036 None:intergenic 45.0%
TCAGATGAAAGCGAGGATGA+AGG + chr1.2:55424449-55424468 MS.gene32071:intron 45.0%
TCCAGGTTCACTATGACTCT+AGG - chr1.2:55424036-55424055 None:intergenic 45.0%
TGCAAATTCCAAAACCGTCG+CGG - chr1.2:55423312-55423331 None:intergenic 45.0%
TGGGTCGTCTTCATCATCAT+TGG + chr1.2:55424514-55424533 MS.gene32071:CDS 45.0%
TGGTTCATCCCACAAAACTG+TGG + chr1.2:55427238-55427257 MS.gene32071:CDS 45.0%
TTCTTTAGCGTGCACCAACA+TGG - chr1.2:55425580-55425599 None:intergenic 45.0%
! AGAGTCTTCTGACTCGATCA+AGG - chr1.2:55425002-55425021 None:intergenic 45.0%
! GCAGCCCCAATTGTTTTCAA+TGG + chr1.2:55427317-55427336 MS.gene32071:CDS 45.0%
! GCCCCAATTGTTTTCAATGG+TGG + chr1.2:55427320-55427339 MS.gene32071:CDS 45.0%
! GGAGTGTCCATTAAATGGAG+AGG - chr1.2:55426337-55426356 None:intergenic 45.0%
! TGAAGTACTCAAGATCACCC+AGG + chr1.2:55427295-55427314 MS.gene32071:CDS 45.0%
! TTTTGATCAGGGACGACTTG+TGG + chr1.2:55424763-55424782 MS.gene32071:CDS 45.0%
!! AAAGCTGCCGATTCTTCTTG+TGG + chr1.2:55424569-55424588 MS.gene32071:CDS 45.0%
!! AAGAGCATTGTGTTCAGCCT+TGG - chr1.2:55427360-55427379 None:intergenic 45.0%
!! TGTTTTCAATGGTGGGGAAG+AGG + chr1.2:55427328-55427347 MS.gene32071:CDS 45.0%
!!! CGACGGTTTTGGAATTTGCA+AGG + chr1.2:55423312-55423331 MS.gene32071:intron 45.0%
!!! GCTACAGGGCTTTTAACTTG+TGG - chr1.2:55424320-55424339 None:intergenic 45.0%
AACAGGCATCAGCAAGAAGC+AGG - chr1.2:55423856-55423875 None:intergenic 50.0%
AAGGGAGCAGAAGGAAGCAA+GGG + chr1.2:55426457-55426476 MS.gene32071:intron 50.0%
AATAGACCTCCCATGCAAGG+TGG - chr1.2:55426493-55426512 None:intergenic 50.0%
AATTCCAAAACCGTCGCGGT+AGG - chr1.2:55423308-55423327 None:intergenic 50.0%
AATTCTGGCGACTGAGCTGA+AGG + chr1.2:55425755-55425774 MS.gene32071:CDS 50.0%
AGGGTTTGTATCCCGTGAAG+GGG - chr1.2:55424016-55424035 None:intergenic 50.0%
ATAGACCTCCCATGCAAGGT+GGG - chr1.2:55426492-55426511 None:intergenic 50.0%
ATCCCTTTCACCAGACAAGC+TGG - chr1.2:55425799-55425818 None:intergenic 50.0%
ATGATAGCTCCCACCTTGCA+TGG + chr1.2:55426480-55426499 MS.gene32071:intron 50.0%
CCCTAGAGTCATAGTGAACC+TGG + chr1.2:55424032-55424051 MS.gene32071:CDS 50.0%
CGAGGATGAAGGGAAAAGGT+TGG + chr1.2:55424460-55424479 MS.gene32071:CDS 50.0%
CTAGGGTTTGTATCCCGTGA+AGG - chr1.2:55424018-55424037 None:intergenic 50.0%
CTGCGATACAAGTCACGGAT+TGG + chr1.2:55424961-55424980 MS.gene32071:CDS 50.0%
GAAAACAATTGGGGCTGCCT+GGG - chr1.2:55427315-55427334 None:intergenic 50.0%
GAAGGATGCTGATATGGCTG+CGG + chr1.2:55423936-55423955 MS.gene32071:CDS 50.0%
GATGAGAGAGGTGGAACATC+AGG + chr1.2:55425476-55425495 MS.gene32071:CDS 50.0%
GGCTGCGGAAGTTGTTCTTA+CGG + chr1.2:55423951-55423970 MS.gene32071:CDS 50.0%
GTCCAGCTTGTCTGGTGAAA+GGG + chr1.2:55425794-55425813 MS.gene32071:CDS 50.0%
TAAGGGAGCAGAAGGAAGCA+AGG + chr1.2:55426456-55426475 MS.gene32071:intron 50.0%
TACTTCCAGCATCCCCTTCA+CGG + chr1.2:55424001-55424020 MS.gene32071:CDS 50.0%
TCAGGAGAAACTTGCAGAGC+AGG + chr1.2:55425494-55425513 MS.gene32071:CDS 50.0%
TGAAAACAATTGGGGCTGCC+TGG - chr1.2:55427316-55427335 None:intergenic 50.0%
TGATAGCTCCCACCTTGCAT+GGG + chr1.2:55426481-55426500 MS.gene32071:intron 50.0%
TGTCCAGCTTGTCTGGTGAA+AGG + chr1.2:55425793-55425812 MS.gene32071:CDS 50.0%
! AGGTGGATTCCAGGTTGTTG+AGG + chr1.2:55423893-55423912 MS.gene32071:intron 50.0%
! GGTGGATTCCAGGTTGTTGA+GGG + chr1.2:55423894-55423913 MS.gene32071:intron 50.0%
! GTGAGTTCCTGATGGATCGT+GGG + chr1.2:55426695-55426714 MS.gene32071:CDS 50.0%
! TGCCTGTATAGGTGGATTCC+AGG + chr1.2:55423884-55423903 MS.gene32071:intron 50.0%
!! TGCCGATTCTTCTTGTGGAC+TGG + chr1.2:55424574-55424593 MS.gene32071:CDS 50.0%
AATATAGCAGCGACCACCGG+AGG + chr1.2:55425519-55425538 MS.gene32071:CDS 55.0%
ACTTCCAGCATCCCCTTCAC+GGG + chr1.2:55424002-55424021 MS.gene32071:CDS 55.0%
ATATAGCAGCGACCACCGGA+GGG + chr1.2:55425520-55425539 MS.gene32071:CDS 55.0%
ATCTGGGCCAGAAGAAGAGC+TGG - chr1.2:55424276-55424295 None:intergenic 55.0%
GCCAATATAGCAGCGACCAC+CGG + chr1.2:55425516-55425535 MS.gene32071:CDS 55.0%
GGAATCACGGAGACTACAGC+AGG + chr1.2:55426166-55426185 MS.gene32071:CDS 55.0%
TCACGTCTGTCCAGCTTGTC+TGG + chr1.2:55425786-55425805 MS.gene32071:CDS 55.0%
TCCGGTGGTCGCTGCTATAT+TGG - chr1.2:55425520-55425539 None:intergenic 55.0%
TTCCAGGTTGTTGAGGGCAG+TGG + chr1.2:55423900-55423919 MS.gene32071:CDS 55.0%
! CGTGAGTTCCTGATGGATCG+TGG + chr1.2:55426694-55426713 MS.gene32071:CDS 55.0%
AGCCACTGCCCTCAACAACC+TGG - chr1.2:55423905-55423924 None:intergenic 60.0%
CAACCTGCCCACGATCCATC+AGG - chr1.2:55426705-55426724 None:intergenic 60.0%
GTATCCCGTGAAGGGGATGC+TGG - chr1.2:55424009-55424028 None:intergenic 60.0%
TAGCTCCCACCTTGCATGGG+AGG + chr1.2:55426484-55426503 MS.gene32071:intron 60.0%
TATTGGGCCACCTACCGCGA+CGG + chr1.2:55423295-55423314 MS.gene32071:intron 60.0%
TCCAAAACCGTCGCGGTAGG+TGG - chr1.2:55423305-55423324 None:intergenic 60.0%
TGGGGAAGAGGAGAGCTCCA+AGG + chr1.2:55427340-55427359 MS.gene32071:CDS 60.0%
! GTTCCTGATGGATCGTGGGC+AGG + chr1.2:55426699-55426718 MS.gene32071:CDS 60.0%
! GCCACCTACCGCGACGGTTT+TGG + chr1.2:55423301-55423320 MS.gene32071:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 55422917 55427439 55422917 ID=MS.gene32071
chr1.2 mRNA 55422917 55427439 55422917 ID=MS.gene32071.t1;Parent=MS.gene32071
chr1.2 exon 55422917 55422964 55422917 ID=MS.gene32071.t1.exon1;Parent=MS.gene32071.t1
chr1.2 CDS 55422917 55422964 55422917 ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1
chr1.2 exon 55423895 55424057 55423895 ID=MS.gene32071.t1.exon2;Parent=MS.gene32071.t1
chr1.2 CDS 55423895 55424057 55423895 ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1
chr1.2 exon 55424159 55424356 55424159 ID=MS.gene32071.t1.exon3;Parent=MS.gene32071.t1
chr1.2 CDS 55424159 55424356 55424159 ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1
chr1.2 exon 55424453 55425204 55424453 ID=MS.gene32071.t1.exon4;Parent=MS.gene32071.t1
chr1.2 CDS 55424453 55425204 55424453 ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1
chr1.2 exon 55425438 55425611 55425438 ID=MS.gene32071.t1.exon5;Parent=MS.gene32071.t1
chr1.2 CDS 55425438 55425611 55425438 ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1
chr1.2 exon 55425726 55425842 55425726 ID=MS.gene32071.t1.exon6;Parent=MS.gene32071.t1
chr1.2 CDS 55425726 55425842 55425726 ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1
chr1.2 exon 55426029 55426208 55426029 ID=MS.gene32071.t1.exon7;Parent=MS.gene32071.t1
chr1.2 CDS 55426029 55426208 55426029 ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1
chr1.2 exon 55426691 55426737 55426691 ID=MS.gene32071.t1.exon8;Parent=MS.gene32071.t1
chr1.2 CDS 55426691 55426737 55426691 ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1
chr1.2 exon 55427121 55427439 55427121 ID=MS.gene32071.t1.exon9;Parent=MS.gene32071.t1
chr1.2 CDS 55427121 55427439 55427121 ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1
Gene Sequence

>MS.gene32071

ATGGGTTTCAATTCTGTCTATAGATCTTTGCTCGATATTTTTCCCCAGGTATACATACCTATTCAATTATGATTGTAGATTAATCTTTTTTTGATTTTTTTTAATTATTATATTATTATACTTTTTTGATGCTCTGTGATCATGTTTTATTTGTATTCTGGTTCCGAATTTGTTAACTTCAATTGGGTTTTCAAATTTAAAATTAATCAAATAAAATTCAAGTTTATAAATTTAACTTTCTACCTAAGGATTGTATGATTAAACATATTTCTTGCTACTTTCAAACCCAAGTTCCCTATGTTTTTAGTCCCATGCAATTATAGCGTTTGAAATTTGAATTCAGTATCTGCAAATTCAAAAGTTGTTGCTTATAGTCGTTATTGGGCCACCTACCGCGACGGTTTTGGAATTTGCAAGGTCGGAATCTAAACAATAATACTAACTTGAGGAGATTCAAACCAGAAAACACTTTAATTGTAGGATCAAAAATCATATTTAGATCTAAATTCTGTTATAACTATTACTTTCTTATTGGGGGATGGAATGGTTACATCAATCATGGTTTATTAGTTACTATATATGACACTTGAGATTATCGGATTTTCAAGGAACCCTAATTGTAAATTGACTTGCTTCAAGTAAAACAACGCTTTAGTTAATATATTAGAGTCGTTAGATGAAGATCAAATGACTCATATTCGAAGTTTGTGTTTTGAATTTCATTTACTGAGATTAGAATGTGAACTATTCAAGGATTTTGTTCTACTGACTCTAGTGATTGCATTATTTTCTGACTGTAACAAATTTAGGTTTGTAGTTGATGTATGAATACTAATTTGATGCTAATATTTAAACCACGAATAAGTCTTCTATCGCTTCAATCCAAATATATTAAAGAGATATTACACTAGGAATGTGGCTGGCCTGTTACTGATACCTGCTTCTTGCTGATGCCTGTTTCTTTCTTTGCCTGTATAGGTGGATTCCAGGTTGTTGAGGGCAGTGGCTATTGAACACTCGAAGGATGCTGATATGGCTGCGGAAGTTGTTCTTACGGAAATCATCCCAGCAATTTCTAAAAAATTACTTCCAGCATCCCCTTCACGGGATACAAACCCTAGAGTCATAGTGAACCTGGAAGGTGAGTCTACTTTTATGTACATGCATTTCCATACCATTCTCTAAATAGCTTGCTTTGAAACGGTTTACTAATATATTTCTGATGACATATTGAACATTTAGATGAAAGTGAAAGTGAAGATGAAGGGGAGATTTTGGCACGTCATAAGCTTGTTAAAAGTATGGATGTTGGCTCTTCTTCTTCACATTATGTACATCGGGAAATCATCAAATCTGCCAGCTCTTCTTCTGGCCCAGATCTGAATGTTACAGTAACTTCTCCACAAGTTAAAAGCCCTGTAGCATTTATAAACCTTGAAGGTTTGTTCACTTTCTCTATACGTTCAATTCCATCTATACCTTGCTTGCTTTGAATTGGTGTATTGATATATTTCTAATGACACATTGAATCTTCAGATGAAAGCGAGGATGAAGGGAAAAGGTTGGTGCAGTATCAACCTGTTGAAGATACTGATGTTGGGTCGTCTTCATCATCATTGGCATCATCATGTTCTAGACCTGTACAAATCATCAAAGCTGCCGATTCTTCTTGTGGACTGGATCTGAATGTAGCTCTTGATGACTCTACACTGTCAAATGCCAGTGAGTTAAATGATGAAACCAGTCAATTGCTTGGGGTAAATAATGATGGTAACTTAACTAGAGATATCTCTAGTGAAATTTCCCAGGAGACATCAAATGGATTTTGGCACGAAGCTAGTGAAAATTTTGATCAGGGACGACTTGTGGATGTCATTGTTGAAAATTTGGCATCTTCAGGTGTATATCACGTGTTGGAGACGGAACAGATAAATGTTGCAGAGGAGGCTGCTTCCATGACTAACAATGGCAATGGAACTTCAAACAATCTGAATGAAGAGTGGGTAGATTTTGTTCCTACGGCTGAAGATTATGATGCTACTATCTGCGATACAAGTCACGGATTGGAAAAATCTGAAACTGCCTTGATCGAGTCAGAAGACTCTGAAGTTCAAACAGTGTCTCAAGTTCAGGGGCTTACACTAAATGCTAAAGATCTTCAGACAGAATTTAATACTACACTAAATGCTGTAGATGAGATTGATGAGAATACGACTCTAGGCCAATATAATCCAGCCTGCAGTATTGATATGCTTGAGGAGACCATCGATGAAGCAAAAACAAATAAGGTCTTGTCAGTCCTATTTTCTTATATTTGGATGCTATGAATACATTATTTACTAGCCTTACTTATATTTGATAGAACTTATGAAATTGGCAGTGTAACCATTGTTTTGAATAATTTAATAATAACTTGTCATCTTTTGTTACTATAAAATGTTGTAACTACATTCAAGTCATTGAAACATGATATGATCTTAACTTCTGACATCTTATGCTTTATTATTCTACATTGATGCAGAAAACCTTGTTTTCATCAATGGAATCTCTTATCAACTTGATGAGAGAGGTGGAACATCAGGAGAAACTTGCAGAGCAGGCCAATATAGCAGCGACCACCGGAGGGTTTGATATTCTAGATAGGGTAGATGAGTATCAAGCCATGTTGGTGCACGCTAAAGAAGCAAATGACATGGTTCGGAATGAAATGAATAACTGAAATTATATATGTCAAAGCTTTTAAATATTTGATGATGTTTTTTTAGACATGATGGACAAAAAGAATTTAACGTAAACTTTTTATTTGCAGCATGCTGGGGAAATTTATGGCGAAAAGGCAATTCTGGCGACTGAGCTGAAGGAACTTCAATCACGTCTGTCCAGCTTGTCTGGTGAAAGGGATGAGTCTCTTGCAATTCTTGATGAGGTGCTCAACTTGTTGTTTTTGCTGAAATCATTTTCATCATATTTTTCTGTATATTTTTTTTTTTTCATTTCAAAATAAATAGCCCGAGCATCTTTCCGACTAACTGAGATCGGAATCATTTCACTGTTATTATTTAATGGAGAACATGTGATTTGAGTCTGACATTTAATATTCTCTTGCTTGCAGATGCGCCAAAGTCTTGAATCTCGATTAGCTGCAGCAGAAATGTTGAGGAAAGCGGCAGAGCTTGAAAAGCTTGAAAAAGAGGAATCGGCAAGGGCTGCACTTCTAGAACAAGAAGCAATGATGGAGAAGGTAGTACAGGAATCACGGAGACTACAGCAGGAAGCTGAAGAGAATTCAAAGGTTGCTAGTCTTTCCTCTGCTTCCAAACCATTTCATTATATTTCTGTAAATATCCATATATGAAAGAGTTCTTTTAATGTGTATAGTAAGTTCATATTGGTCCTTTAATCTTTAGGGGTTGAGATCCTCTCCATTTAATGGACACTCCCATTTGGAGAGAGAGACAATGAATATAATAATATTTTTAAAATAACTTTTAGTGGGTTTTAATACACGTTGGCTTTGATTGGGAATTACAAGGAAAAGATAAGGGAGCAGAAGGAAGCAAGGGATGATAGCTCCCACCTTGCATGGGAGGTCTATTTTGCTCCATAAAGCTAAATTCATTCGCTCCCATTCCTTTCCTAACTCCCAATCAAAGCCTATAGATTAGTTAACGATTGGTGCACCATATTTACCCAGTTTAGAGTCAACACAGTAGTGAGGCTTTTCCCCATTGTTTAATGATTTTTAATTTTAATGACTCCTTCTCATCTTTACAGTTACGTGAGTTCCTGATGGATCGTGGGCAGGTTGTTGATACGTTGCAGTAAGTTGTTTCTCTGCTGTTTATATATAGTTGTAAATATTATTTTCTTCCTGGTATTGAACTATCAATACTTTGTCTCTGCAACATTCTATTGGTTTTATTTCATATTATTGTGTGAATACTTGTGACCTTATTAGTGTAATTTTGATTATGGAAGTTACGTCTCTCATTGCTAATTTTCCCTATCTGTTCATTTTGATTTACTGTTTCCCTAGAAATCCTGTTTCAGTATAACTTGGATATTTTTTCTCAGACTTACACATACATGCATATTTTTTCTCTCAGACTTGCACATTGTATTGTCATGAATTAATAGTATCTTCTGCAGTAGATGTTTTTATAATTCCAAATTTATTAAATCTACTTTTTGTTTAACTTTGCAGAGGAGAAATTTCTGTTATCTGTCAGGATATTAGACTTCTGAAAGAGAAATTTGATGCAAATCTTCCTTTGAGCAAATCATTCACAGCAAGTCAGACAAGTTGCATCTTAGCTTCTTCTGGTTCATCCCACAAAACTGTGGCATCTAATGTGGGTTCTGAGCATAGTGATTCTTCTGAAGTACTCAAGATCACCCAGGCAGCCCCAATTGTTTTCAATGGTGGGGAAGAGGAGAGCTCCAAGGCTGAACACAATGCTCTTATTGATGATGGGTGGGATATTTTTGACAAAGATGCAGAACTGGACTCTGGAGTTTTCTAA

Protein sequence

>MS.gene32071.t1

MGFNSVYRSLLDIFPQVDSRLLRAVAIEHSKDADMAAEVVLTEIIPAISKKLLPASPSRDTNPRVIVNLEDESESEDEGEILARHKLVKSMDVGSSSSHYVHREIIKSASSSSGPDLNVTVTSPQVKSPVAFINLEDESEDEGKRLVQYQPVEDTDVGSSSSSLASSCSRPVQIIKAADSSCGLDLNVALDDSTLSNASELNDETSQLLGVNNDGNLTRDISSEISQETSNGFWHEASENFDQGRLVDVIVENLASSGVYHVLETEQINVAEEAASMTNNGNGTSNNLNEEWVDFVPTAEDYDATICDTSHGLEKSETALIESEDSEVQTVSQVQGLTLNAKDLQTEFNTTLNAVDEIDENTTLGQYNPACSIDMLEETIDEAKTNKKTLFSSMESLINLMREVEHQEKLAEQANIAATTGGFDILDRVDEYQAMLVHAKEANDMHAGEIYGEKAILATELKELQSRLSSLSGERDESLAILDEMRQSLESRLAAAEMLRKAAELEKLEKEESARAALLEQEAMMEKVVQESRRLQQEAEENSKLREFLMDRGQVVDTLQGEISVICQDIRLLKEKFDANLPLSKSFTASQTSCILASSGSSHKTVASNVGSEHSDSSEVLKITQAAPIVFNGGEEESSKAEHNALIDDGWDIFDKDAELDSGVF