Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32071.t1 | XP_003590679.1 | 93.3 | 674 | 35 | 3 | 1 | 665 | 1 | 673 | 0.00E+00 | 1110.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32071.t1 | G7IEG1 | 93.3 | 674 | 35 | 3 | 1 | 665 | 1 | 673 | 0.0e+00 | 1110.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049419 | MS.gene32071 | -0.850769 | 1.37E-60 | -1.69E-46 |
MS.gene04991 | MS.gene32071 | -0.816481 | 5.41E-52 | -1.69E-46 |
MS.gene049983 | MS.gene32071 | 0.817401 | 3.36E-52 | -1.69E-46 |
MS.gene050105 | MS.gene32071 | 0.832044 | 1.18E-55 | -1.69E-46 |
MS.gene050654 | MS.gene32071 | 0.832855 | 7.45E-56 | -1.69E-46 |
MS.gene050737 | MS.gene32071 | 0.8249 | 6.28E-54 | -1.69E-46 |
MS.gene050826 | MS.gene32071 | 0.821886 | 3.18E-53 | -1.69E-46 |
MS.gene050941 | MS.gene32071 | 0.837568 | 4.81E-57 | -1.69E-46 |
MS.gene051122 | MS.gene32071 | 0.864544 | 1.13E-64 | -1.69E-46 |
MS.gene051368 | MS.gene32071 | 0.801127 | 1.04E-48 | -1.69E-46 |
MS.gene051541 | MS.gene32071 | 0.821099 | 4.83E-53 | -1.69E-46 |
MS.gene052493 | MS.gene32071 | 0.822408 | 2.41E-53 | -1.69E-46 |
MS.gene052674 | MS.gene32071 | 0.877975 | 4.08E-69 | -1.69E-46 |
MS.gene052675 | MS.gene32071 | 0.871857 | 4.97E-67 | -1.69E-46 |
MS.gene052677 | MS.gene32071 | 0.876236 | 1.64E-68 | -1.69E-46 |
MS.gene05350 | MS.gene32071 | 0.832628 | 8.48E-56 | -1.69E-46 |
MS.gene053726 | MS.gene32071 | 0.821812 | 3.31E-53 | -1.69E-46 |
MS.gene054479 | MS.gene32071 | 0.835104 | 2.04E-56 | -1.69E-46 |
MS.gene054892 | MS.gene32071 | 0.817393 | 3.38E-52 | -1.69E-46 |
MS.gene054893 | MS.gene32071 | 0.815626 | 8.40E-52 | -1.69E-46 |
MS.gene055327 | MS.gene32071 | 0.817875 | 2.63E-52 | -1.69E-46 |
MS.gene055701 | MS.gene32071 | 0.840055 | 1.09E-57 | -1.69E-46 |
MS.gene055864 | MS.gene32071 | 0.834229 | 3.38E-56 | -1.69E-46 |
MS.gene055926 | MS.gene32071 | 0.806992 | 6.28E-50 | -1.69E-46 |
MS.gene056480 | MS.gene32071 | 0.849384 | 3.35E-60 | -1.69E-46 |
MS.gene056779 | MS.gene32071 | 0.824478 | 7.90E-54 | -1.69E-46 |
MS.gene056973 | MS.gene32071 | 0.801346 | 9.40E-49 | -1.69E-46 |
MS.gene057156 | MS.gene32071 | -0.812903 | 3.35E-51 | -1.69E-46 |
MS.gene05761 | MS.gene32071 | 0.812008 | 5.26E-51 | -1.69E-46 |
MS.gene058081 | MS.gene32071 | 0.91004 | 2.92E-82 | -1.69E-46 |
MS.gene058223 | MS.gene32071 | -0.833132 | 6.36E-56 | -1.69E-46 |
MS.gene058429 | MS.gene32071 | 0.85314 | 2.91E-61 | -1.69E-46 |
MS.gene05897 | MS.gene32071 | 0.804351 | 2.25E-49 | -1.69E-46 |
MS.gene059283 | MS.gene32071 | 0.808003 | 3.83E-50 | -1.69E-46 |
MS.gene059439 | MS.gene32071 | 0.807796 | 4.24E-50 | -1.69E-46 |
MS.gene059440 | MS.gene32071 | 0.831847 | 1.32E-55 | -1.69E-46 |
MS.gene059952 | MS.gene32071 | 0.839436 | 1.59E-57 | -1.69E-46 |
MS.gene060259 | MS.gene32071 | 0.805619 | 1.22E-49 | -1.69E-46 |
MS.gene060373 | MS.gene32071 | 0.806576 | 7.69E-50 | -1.69E-46 |
MS.gene060520 | MS.gene32071 | 0.830109 | 3.53E-55 | -1.69E-46 |
MS.gene060527 | MS.gene32071 | 0.821673 | 3.56E-53 | -1.69E-46 |
MS.gene06052 | MS.gene32071 | 0.830365 | 3.06E-55 | -1.69E-46 |
MS.gene060840 | MS.gene32071 | 0.802881 | 4.55E-49 | -1.69E-46 |
MS.gene060850 | MS.gene32071 | 0.880535 | 5.07E-70 | -1.69E-46 |
MS.gene060851 | MS.gene32071 | 0.883425 | 4.54E-71 | -1.69E-46 |
MS.gene060852 | MS.gene32071 | 0.882765 | 7.92E-71 | -1.69E-46 |
MS.gene060932 | MS.gene32071 | 0.848803 | 4.86E-60 | -1.69E-46 |
MS.gene06121 | MS.gene32071 | 0.846247 | 2.45E-59 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32071.t1 | MTR_1g072560 | 93.620 | 674 | 33 | 3 | 1 | 665 | 1 | 673 | 0.0 | 1154 |
MS.gene32071.t1 | MTR_1g072560 | 93.141 | 554 | 28 | 3 | 1 | 545 | 1 | 553 | 0.0 | 924 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene32071.t1 | AT4G02880 | 57.655 | 307 | 117 | 2 | 354 | 660 | 263 | 556 | 3.34e-98 | 312 |
MS.gene32071.t1 | AT4G02880 | 35.938 | 128 | 79 | 2 | 1 | 126 | 1 | 127 | 1.78e-13 | 73.9 |
MS.gene32071.t1 | AT4G02880 | 57.655 | 307 | 117 | 2 | 354 | 660 | 259 | 552 | 3.40e-98 | 312 |
MS.gene32071.t1 | AT4G02880 | 57.692 | 52 | 22 | 0 | 1 | 52 | 1 | 52 | 5.07e-13 | 72.4 |
MS.gene32071.t1 | AT1G03290 | 58.478 | 289 | 115 | 1 | 371 | 659 | 231 | 514 | 2.99e-93 | 298 |
MS.gene32071.t1 | AT1G03290 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 4.73e-17 | 85.1 |
MS.gene32071.t1 | AT1G03290 | 58.478 | 289 | 115 | 1 | 371 | 659 | 253 | 536 | 8.18e-93 | 298 |
MS.gene32071.t1 | AT1G03290 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 5.46e-17 | 85.1 |
MS.gene32071.t1 | AT1G03290 | 58.478 | 289 | 115 | 1 | 371 | 659 | 283 | 566 | 1.54e-92 | 298 |
MS.gene32071.t1 | AT1G03290 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 6.33e-17 | 85.1 |
MS.gene32071.t1 | AT1G03290 | 58.478 | 289 | 115 | 1 | 371 | 659 | 283 | 566 | 1.54e-92 | 298 |
MS.gene32071.t1 | AT1G03290 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 6.33e-17 | 85.1 |
MS.gene32071.t1 | AT1G03290 | 58.478 | 289 | 115 | 1 | 371 | 659 | 283 | 566 | 1.54e-92 | 298 |
MS.gene32071.t1 | AT1G03290 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 6.33e-17 | 85.1 |
MS.gene32071.t1 | AT1G03290 | 58.478 | 289 | 115 | 1 | 371 | 659 | 283 | 566 | 1.54e-92 | 298 |
MS.gene32071.t1 | AT1G03290 | 71.698 | 53 | 15 | 0 | 1 | 53 | 1 | 53 | 6.33e-17 | 85.1 |
MS.gene32071.t1 | AT5G64980 | 63.043 | 46 | 17 | 0 | 1 | 46 | 1 | 46 | 1.83e-12 | 69.7 |
MS.gene32071.t1 | AT5G64980 | 63.043 | 46 | 17 | 0 | 1 | 46 | 1 | 46 | 1.83e-12 | 69.7 |
Find 141 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAGCATGCTGGGGAAATTTA+TGG | 0.158311 | 1.2:+55425723 | MS.gene32071:intron |
TGAAGATGAAGGGGAGATTT+TGG | 0.214160 | 1.2:+55424172 | MS.gene32071:CDS |
GGATGTCATTGTTGAAAATT+TGG | 0.236630 | 1.2:+55424784 | MS.gene32071:CDS |
AGGAGACATCAAATGGATTT+TGG | 0.242755 | 1.2:+55424723 | MS.gene32071:CDS |
AGTTGCATCTTAGCTTCTTC+TGG | 0.265917 | 1.2:+55427218 | MS.gene32071:CDS |
TCCGGTGGTCGCTGCTATAT+TGG | 0.280747 | 1.2:-55425517 | None:intergenic |
GTTGAAAATTTGGCATCTTC+AGG | 0.284090 | 1.2:+55424794 | MS.gene32071:CDS |
TGCCTGTATAGGTGGATTCC+AGG | 0.290736 | 1.2:+55423884 | MS.gene32071:intron |
TCAAACAGTGTCTCAAGTTC+AGG | 0.292873 | 1.2:+55425027 | MS.gene32071:CDS |
TTATGGCGAAAAGGCAATTC+TGG | 0.316460 | 1.2:+55425740 | MS.gene32071:CDS |
TCCCCACCATTGAAAACAAT+TGG | 0.336636 | 1.2:-55427323 | None:intergenic |
TCATAAGCTTGTTAAAAGTA+TGG | 0.338734 | 1.2:+55424199 | MS.gene32071:CDS |
GAGGGTTTGATATTCTAGAT+AGG | 0.355256 | 1.2:+55425538 | MS.gene32071:CDS |
TACTGCAGGCTGGATTATAT+TGG | 0.370799 | 1.2:-55425138 | None:intergenic |
ACACTCGAAGGATGCTGATA+TGG | 0.376751 | 1.2:+55423930 | MS.gene32071:CDS |
GTTACTGTAACATTCAGATC+TGG | 0.391606 | 1.2:-55424290 | None:intergenic |
TCACGTCTGTCCAGCTTGTC+TGG | 0.392930 | 1.2:+55425786 | MS.gene32071:CDS |
TTCTTCACATTATGTACATC+GGG | 0.399469 | 1.2:+55424235 | MS.gene32071:CDS |
AAATCTGCCAGCTCTTCTTC+TGG | 0.403009 | 1.2:+55424266 | MS.gene32071:CDS |
GTAGCATTTATAAACCTTGA+AGG | 0.403669 | 1.2:+55424335 | MS.gene32071:CDS |
CCCCACCATTGAAAACAATT+GGG | 0.410851 | 1.2:-55427322 | None:intergenic |
TAAAAGTAGACTCACCTTCC+AGG | 0.411888 | 1.2:-55424050 | None:intergenic |
TCAAGGTTTATAAATGCTAC+AGG | 0.412424 | 1.2:-55424332 | None:intergenic |
AGAAATTTCTGTTATCTGTC+AGG | 0.418878 | 1.2:+55427124 | MS.gene32071:CDS |
ATGAAACCAGTCAATTGCTT+GGG | 0.419864 | 1.2:+55424651 | MS.gene32071:CDS |
GATGAGAGAGGTGGAACATC+AGG | 0.426615 | 1.2:+55425476 | MS.gene32071:CDS |
TGAAAACAATTGGGGCTGCC+TGG | 0.429019 | 1.2:-55427313 | None:intergenic |
TTCCAGGTTGTTGAGGGCAG+TGG | 0.430937 | 1.2:+55423900 | MS.gene32071:CDS |
CCCTAGAGTCATAGTGAACC+TGG | 0.434969 | 1.2:+55424032 | MS.gene32071:CDS |
CACAATGCTCTTATTGATGA+TGG | 0.440539 | 1.2:+55427368 | MS.gene32071:CDS |
TACTTCCAGCATCCCCTTCA+CGG | 0.443418 | 1.2:+55424001 | MS.gene32071:CDS |
CCAGGTTCACTATGACTCTA+GGG | 0.446067 | 1.2:-55424032 | None:intergenic |
AAAATCCATTTGATGTCTCC+TGG | 0.449566 | 1.2:-55424721 | None:intergenic |
TCAGGAGAAACTTGCAGAGC+AGG | 0.457789 | 1.2:+55425494 | MS.gene32071:CDS |
GGTGGATTCCAGGTTGTTGA+GGG | 0.458095 | 1.2:+55423894 | MS.gene32071:intron |
GAAAGTGAAAGTGAAGATGA+AGG | 0.459096 | 1.2:+55424161 | MS.gene32071:CDS |
GTCCAGCTTGTCTGGTGAAA+GGG | 0.461081 | 1.2:+55425794 | MS.gene32071:CDS |
GGCTGCGGAAGTTGTTCTTA+CGG | 0.467393 | 1.2:+55423951 | MS.gene32071:CDS |
AAGAGCATTGTGTTCAGCCT+TGG | 0.467976 | 1.2:-55427357 | None:intergenic |
GGTTTCATCATTTAACTCAC+TGG | 0.469884 | 1.2:-55424636 | None:intergenic |
ATCCCTTTCACCAGACAAGC+TGG | 0.471279 | 1.2:-55425796 | None:intergenic |
ATTTCCCAGGAGACATCAAA+TGG | 0.472240 | 1.2:+55424716 | MS.gene32071:CDS |
TCCATTGCCATTGTTAGTCA+TGG | 0.473377 | 1.2:-55424870 | None:intergenic |
TGTCCAGCTTGTCTGGTGAA+AGG | 0.474114 | 1.2:+55425793 | MS.gene32071:CDS |
TGCCGATTCTTCTTGTGGAC+TGG | 0.474130 | 1.2:+55424574 | MS.gene32071:CDS |
ATCCAGTCCACAAGAAGAAT+CGG | 0.478136 | 1.2:-55424576 | None:intergenic |
CTGCGATACAAGTCACGGAT+TGG | 0.483106 | 1.2:+55424961 | MS.gene32071:CDS |
TCTAGAACAAGAAGCAATGA+TGG | 0.490819 | 1.2:+55426130 | MS.gene32071:CDS |
CTAATCGAGATTCAAGACTT+TGG | 0.492088 | 1.2:-55426034 | None:intergenic |
CAAAACTGTGGCATCTAATG+TGG | 0.495135 | 1.2:+55427250 | MS.gene32071:CDS |
TCCAGGTTCACTATGACTCT+AGG | 0.497671 | 1.2:-55424033 | None:intergenic |
GATGAAACCAGTCAATTGCT+TGG | 0.498096 | 1.2:+55424650 | MS.gene32071:CDS |
AGAAAGTGAACAAACCTTCA+AGG | 0.498899 | 1.2:-55424349 | None:intergenic |
ATCTGGGCCAGAAGAAGAGC+TGG | 0.501030 | 1.2:-55424273 | None:intergenic |
AATGATGGAGAAGGTAGTAC+AGG | 0.501842 | 1.2:+55426145 | MS.gene32071:CDS |
TGGGTCGTCTTCATCATCAT+TGG | 0.505413 | 1.2:+55424514 | MS.gene32071:CDS |
AAAGCGAGGATGAAGGGAAA+AGG | 0.505775 | 1.2:+55424456 | MS.gene32071:CDS |
AAAGCTGCCGATTCTTCTTG+TGG | 0.507371 | 1.2:+55424569 | MS.gene32071:CDS |
ATTTACCCCAAGCAATTGAC+TGG | 0.507418 | 1.2:-55424657 | None:intergenic |
CCAACATCAGTATCTTCAAC+AGG | 0.508842 | 1.2:-55424494 | None:intergenic |
CAACCTGCCCACGATCCATC+AGG | 0.511341 | 1.2:-55426702 | None:intergenic |
TCAGATGAAAGCGAGGATGA+AGG | 0.511685 | 1.2:+55424449 | MS.gene32071:intron |
AAAGTGAAAGTGAAGATGAA+GGG | 0.512917 | 1.2:+55424162 | MS.gene32071:CDS |
ACTTCCAGCATCCCCTTCAC+GGG | 0.513246 | 1.2:+55424002 | MS.gene32071:CDS |
GTATCCCGTGAAGGGGATGC+TGG | 0.514200 | 1.2:-55424006 | None:intergenic |
AGGTGGATTCCAGGTTGTTG+AGG | 0.514430 | 1.2:+55423893 | MS.gene32071:intron |
CTTCTTCACATTATGTACAT+CGG | 0.516869 | 1.2:+55424234 | MS.gene32071:CDS |
GCCAATATAGCAGCGACCAC+CGG | 0.517149 | 1.2:+55425516 | MS.gene32071:CDS |
GCAGCTTTGATGATTTGTAC+AGG | 0.517673 | 1.2:-55424554 | None:intergenic |
AGGGTTTGATATTCTAGATA+GGG | 0.517722 | 1.2:+55425539 | MS.gene32071:CDS |
AGAGTCTTCTGACTCGATCA+AGG | 0.518967 | 1.2:-55424999 | None:intergenic |
TGGGGAAATTTATGGCGAAA+AGG | 0.520761 | 1.2:+55425731 | MS.gene32071:CDS |
CAAACAGTGTCTCAAGTTCA+GGG | 0.526735 | 1.2:+55425028 | MS.gene32071:CDS |
CAGATGAAAGCGAGGATGAA+GGG | 0.528971 | 1.2:+55424450 | MS.gene32071:intron |
CGTGAGTTCCTGATGGATCG+TGG | 0.534361 | 1.2:+55426694 | MS.gene32071:CDS |
AGCATATCAATACTGCAGGC+TGG | 0.534938 | 1.2:-55425148 | None:intergenic |
GAAAACAATTGGGGCTGCCT+GGG | 0.536146 | 1.2:-55427312 | None:intergenic |
TTGCTTGGGGTAAATAATGA+TGG | 0.536969 | 1.2:+55424665 | MS.gene32071:CDS |
ACAGTTACGTGAGTTCCTGA+TGG | 0.538443 | 1.2:+55426687 | MS.gene32071:intron |
AGCCACTGCCCTCAACAACC+TGG | 0.540659 | 1.2:-55423902 | None:intergenic |
CTTGTTAAAAGTATGGATGT+TGG | 0.543919 | 1.2:+55424206 | MS.gene32071:CDS |
TAGGGTTTGTATCCCGTGAA+GGG | 0.545390 | 1.2:-55424014 | None:intergenic |
CTCAAGCATATCAATACTGC+AGG | 0.545954 | 1.2:-55425152 | None:intergenic |
GTTCCTGATGGATCGTGGGC+AGG | 0.547821 | 1.2:+55426699 | MS.gene32071:CDS |
TTACTGTAACATTCAGATCT+GGG | 0.548270 | 1.2:-55424289 | None:intergenic |
AAAGATGCAGAACTGGACTC+TGG | 0.555288 | 1.2:+55427407 | MS.gene32071:CDS |
TGCTCTTATTGATGATGGGT+GGG | 0.557476 | 1.2:+55427373 | MS.gene32071:CDS |
ATCTAGAATATCAAACCCTC+CGG | 0.557961 | 1.2:-55425535 | None:intergenic |
TTCTTTAGCGTGCACCAACA+TGG | 0.558785 | 1.2:-55425577 | None:intergenic |
AAATCCATTTGATGTCTCCT+GGG | 0.561238 | 1.2:-55424720 | None:intergenic |
CAAACAATCTGAATGAAGAG+TGG | 0.561365 | 1.2:+55424897 | MS.gene32071:CDS |
GGAAGCTGAAGAGAATTCAA+AGG | 0.561722 | 1.2:+55426187 | MS.gene32071:CDS |
TCCATGACTAACAATGGCAA+TGG | 0.567732 | 1.2:+55424869 | MS.gene32071:CDS |
AATTCTGGCGACTGAGCTGA+AGG | 0.568587 | 1.2:+55425755 | MS.gene32071:CDS |
AAACAATCTGAATGAAGAGT+GGG | 0.568659 | 1.2:+55424898 | MS.gene32071:CDS |
TATCTCTAGTGAAATTTCCC+AGG | 0.568889 | 1.2:+55424703 | MS.gene32071:CDS |
CAAGGTTTATAAATGCTACA+GGG | 0.573009 | 1.2:-55424331 | None:intergenic |
ATTGATGAGAATACGACTCT+AGG | 0.573030 | 1.2:+55425115 | MS.gene32071:CDS |
ACAGATAAATGTTGCAGAGG+AGG | 0.573257 | 1.2:+55424841 | MS.gene32071:CDS |
GCTGTGAATGATTTGCTCAA+AGG | 0.574101 | 1.2:-55427185 | None:intergenic |
TTCAGGTGTATATCACGTGT+TGG | 0.574166 | 1.2:+55424811 | MS.gene32071:CDS |
ACAAGAAGCAATGATGGAGA+AGG | 0.575425 | 1.2:+55426136 | MS.gene32071:CDS |
AAGTGAAAGTGAAGATGAAG+GGG | 0.577481 | 1.2:+55424163 | MS.gene32071:CDS |
CTAGGGTTTGTATCCCGTGA+AGG | 0.582518 | 1.2:-55424015 | None:intergenic |
GTCTCTTGCAATTCTTGATG+AGG | 0.585007 | 1.2:+55425821 | MS.gene32071:CDS |
AGCAGAAATGTTGAGGAAAG+CGG | 0.595016 | 1.2:+55426061 | MS.gene32071:CDS |
CGCTAAAGAAGCAAATGACA+TGG | 0.595563 | 1.2:+55425590 | MS.gene32071:CDS |
GCATCATAATCTTCAGCCGT+AGG | 0.597685 | 1.2:-55424932 | None:intergenic |
CTGTTGAAGATACTGATGTT+GGG | 0.601353 | 1.2:+55424495 | MS.gene32071:CDS |
CCTGTTGAAGATACTGATGT+TGG | 0.601909 | 1.2:+55424494 | MS.gene32071:CDS |
AGATTCCATTGATGAAAACA+AGG | 0.603118 | 1.2:-55425442 | None:intergenic |
CCCACCATTGAAAACAATTG+GGG | 0.604270 | 1.2:-55427321 | None:intergenic |
GTGAGTTCCTGATGGATCGT+GGG | 0.605354 | 1.2:+55426695 | MS.gene32071:CDS |
CGAGGATGAAGGGAAAAGGT+TGG | 0.606782 | 1.2:+55424460 | MS.gene32071:CDS |
ACAATGCTCTTATTGATGAT+GGG | 0.607324 | 1.2:+55427369 | MS.gene32071:CDS |
GAAGGATGCTGATATGGCTG+CGG | 0.608075 | 1.2:+55423936 | MS.gene32071:CDS |
AATATAGCAGCGACCACCGG+AGG | 0.613783 | 1.2:+55425519 | MS.gene32071:CDS |
AGATGAGTATCAAGCCATGT+TGG | 0.617399 | 1.2:+55425563 | MS.gene32071:CDS |
GCTGCTTCCATGACTAACAA+TGG | 0.617805 | 1.2:+55424863 | MS.gene32071:CDS |
AGGGTTTGTATCCCGTGAAG+GGG | 0.617974 | 1.2:-55424013 | None:intergenic |
TATCAACTTGATGAGAGAGG+TGG | 0.618003 | 1.2:+55425467 | MS.gene32071:CDS |
GGAATCACGGAGACTACAGC+AGG | 0.619130 | 1.2:+55426166 | MS.gene32071:CDS |
TAGCTGCAGCAGAAATGTTG+AGG | 0.619883 | 1.2:+55426054 | MS.gene32071:CDS |
TAGAATATCAAACCCTCCGG+TGG | 0.620228 | 1.2:-55425532 | None:intergenic |
CTGCAGTATTGATATGCTTG+AGG | 0.622883 | 1.2:+55425153 | MS.gene32071:CDS |
AGAAGGTAGTACAGGAATCA+CGG | 0.625668 | 1.2:+55426153 | MS.gene32071:CDS |
ATGCTCTTATTGATGATGGG+TGG | 0.625789 | 1.2:+55427372 | MS.gene32071:CDS |
TGTATATCACGTGTTGGAGA+CGG | 0.626009 | 1.2:+55424817 | MS.gene32071:CDS |
AGAGTCATAGTGAACCTGGA+AGG | 0.630016 | 1.2:+55424036 | MS.gene32071:CDS |
AAAACTGTGGCATCTAATGT+GGG | 0.641802 | 1.2:+55427251 | MS.gene32071:CDS |
AAACAGTGTCTCAAGTTCAG+GGG | 0.648434 | 1.2:+55425029 | MS.gene32071:CDS |
TCTTATCAACTTGATGAGAG+AGG | 0.649092 | 1.2:+55425464 | MS.gene32071:CDS |
TGAATCTTCAGATGAAAGCG+AGG | 0.654788 | 1.2:+55424442 | MS.gene32071:intron |
TGGTTCATCCCACAAAACTG+TGG | 0.661631 | 1.2:+55427238 | MS.gene32071:CDS |
ATATAGCAGCGACCACCGGA+GGG | 0.663604 | 1.2:+55425520 | MS.gene32071:CDS |
AGTGGCTATTGAACACTCGA+AGG | 0.665070 | 1.2:+55423918 | MS.gene32071:CDS |
GGAACAGATAAATGTTGCAG+AGG | 0.665164 | 1.2:+55424838 | MS.gene32071:CDS |
TGGGGAAGAGGAGAGCTCCA+AGG | 0.665274 | 1.2:+55427340 | MS.gene32071:CDS |
TGAAACCAGTCAATTGCTTG+GGG | 0.667240 | 1.2:+55424652 | MS.gene32071:CDS |
ACTATCTGCGATACAAGTCA+CGG | 0.668223 | 1.2:+55424956 | MS.gene32071:CDS |
TGAAGTACTCAAGATCACCC+AGG | 0.679720 | 1.2:+55427295 | MS.gene32071:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAGTAGATTTAATAAATT+TGG | - | chr1.2:55427086-55427105 | None:intergenic | 10.0% |
!! | AATTAAAAATCATTAAACAA+TGG | - | chr1.2:55426645-55426664 | None:intergenic | 10.0% |
!! | ATTAAAAATCATTAAACAAT+GGG | - | chr1.2:55426644-55426663 | None:intergenic | 10.0% |
!! | TAATATCTCTTTAATATATT+TGG | - | chr1.2:55423802-55423821 | None:intergenic | 10.0% |
!! | TATTAAATTATTCAAAACAA+TGG | - | chr1.2:55425305-55425324 | None:intergenic | 10.0% |
!!! | ATTTTTAAAATAACTTTTAG+TGG | + | chr1.2:55426389-55426408 | MS.gene32071:intron | 10.0% |
!!! | TTTTTAAAATAACTTTTAGT+GGG | + | chr1.2:55426390-55426409 | MS.gene32071:intron | 10.0% |
!! | ATAACTATTACTTTCTTATT+GGG | + | chr1.2:55423430-55423449 | MS.gene32071:intron | 15.0% |
!! | ATTTCACTGTTATTATTTAA+TGG | + | chr1.2:55425960-55425979 | MS.gene32071:intron | 15.0% |
!! | TAATCAAAATTACACTAATA+AGG | - | chr1.2:55426869-55426888 | None:intergenic | 15.0% |
!! | TATAACTATTACTTTCTTAT+TGG | + | chr1.2:55423429-55423448 | MS.gene32071:intron | 15.0% |
!! | TTAAAAATCATTAAACAATG+GGG | - | chr1.2:55426643-55426662 | None:intergenic | 15.0% |
!! | TTTACAGAAATATAATGAAA+TGG | - | chr1.2:55426239-55426258 | None:intergenic | 15.0% |
!!! | TATTAGTGTAATTTTGATTA+TGG | + | chr1.2:55426869-55426888 | MS.gene32071:intron | 15.0% |
!! | AGAAATATAATGAAATGGTT+TGG | - | chr1.2:55426234-55426253 | None:intergenic | 20.0% |
!! | AGTTCTATCAAATATAAGTA+AGG | - | chr1.2:55425263-55425282 | None:intergenic | 20.0% |
!! | ATCTACAATCATAATTGAAT+AGG | - | chr1.2:55422977-55422996 | None:intergenic | 20.0% |
!! | TAAAAGAACTCTTTCATATA+TGG | - | chr1.2:55426265-55426284 | None:intergenic | 20.0% |
!! | TAAACAATAATACTAACTTG+AGG | + | chr1.2:55423343-55423362 | MS.gene32071:intron | 20.0% |
!! | TAAATCAAAATGAACAGATA+GGG | - | chr1.2:55426921-55426940 | None:intergenic | 20.0% |
!! | TAACTATTACTTTCTTATTG+GGG | + | chr1.2:55423431-55423450 | MS.gene32071:intron | 20.0% |
!! | TATTAAAGAGATATTACACT+AGG | + | chr1.2:55423806-55423825 | MS.gene32071:intron | 20.0% |
!! | TTTGATAGAACTTATGAAAT+TGG | + | chr1.2:55425271-55425290 | MS.gene32071:intron | 20.0% |
!!! | AGTAATTTTTTAGAAATTGC+TGG | - | chr1.2:55423985-55424004 | None:intergenic | 20.0% |
!!! | ATCATGTTTTATTTGTATTC+TGG | + | chr1.2:55423055-55423074 | MS.gene32071:intron | 20.0% |
!!! | GTAATTTTTTAGAAATTGCT+GGG | - | chr1.2:55423984-55424003 | None:intergenic | 20.0% |
!!! | TAAATTTAACTTTCTACCTA+AGG | + | chr1.2:55423143-55423162 | MS.gene32071:intron | 20.0% |
!!! | TGTAAATATTATTTTCTTCC+TGG | + | chr1.2:55426769-55426788 | MS.gene32071:intron | 20.0% |
! | AACTATTACTTTCTTATTGG+GGG | + | chr1.2:55423432-55423451 | MS.gene32071:intron | 25.0% |
! | AAGCAAGTCAATTTACAATT+AGG | - | chr1.2:55423532-55423551 | None:intergenic | 25.0% |
! | AGCAAGTCAATTTACAATTA+GGG | - | chr1.2:55423531-55423550 | None:intergenic | 25.0% |
! | ATATTGGTCCTTTAATCTTT+AGG | + | chr1.2:55426302-55426321 | MS.gene32071:intron | 25.0% |
! | ATTAGAATGTGAACTATTCA+AGG | + | chr1.2:55423648-55423667 | MS.gene32071:intron | 25.0% |
! | CCAATTGAAGTTAACAAATT+CGG | - | chr1.2:55423083-55423102 | None:intergenic | 25.0% |
! | GAATTACAAGGAAAAGATAA+GGG | + | chr1.2:55426439-55426458 | MS.gene32071:intron | 25.0% |
! | GCATCCAAATATAAGAAAAT+AGG | - | chr1.2:55425219-55425238 | None:intergenic | 25.0% |
! | GTAAATCAAAATGAACAGAT+AGG | - | chr1.2:55426922-55426941 | None:intergenic | 25.0% |
! | TATATGACACTTGAGATTAT+CGG | + | chr1.2:55423493-55423512 | MS.gene32071:intron | 25.0% |
! | TATTGGTCCTTTAATCTTTA+GGG | + | chr1.2:55426303-55426322 | MS.gene32071:intron | 25.0% |
! | TGTGTATAGTAAGTTCATAT+TGG | + | chr1.2:55426286-55426305 | MS.gene32071:intron | 25.0% |
! | TGTTTAATCATACAATCCTT+AGG | - | chr1.2:55423162-55423181 | None:intergenic | 25.0% |
! | TTTCTGACTGTAACAAATTT+AGG | + | chr1.2:55423704-55423723 | MS.gene32071:intron | 25.0% |
!! | CAGTCCTATTTTCTTATATT+TGG | + | chr1.2:55425212-55425231 | MS.gene32071:intron | 25.0% |
!!! | CGAATTTGTTAACTTCAATT+GGG | + | chr1.2:55423081-55423100 | MS.gene32071:intron | 25.0% |
!!! | TCATAAGCTTGTTAAAAGTA+TGG | + | chr1.2:55424199-55424218 | MS.gene32071:CDS | 25.0% |
!!! | TGATGTTTTTTTAGACATGA+TGG | + | chr1.2:55425668-55425687 | MS.gene32071:intron | 25.0% |
AAACAATCTGAATGAAGAGT+GGG | + | chr1.2:55424898-55424917 | MS.gene32071:CDS | 30.0% | |
AAAGCAAGCTATTTAGAGAA+TGG | - | chr1.2:55424094-55424113 | None:intergenic | 30.0% | |
AAAGCTTGAAAAAGAGGAAT+CGG | + | chr1.2:55426094-55426113 | MS.gene32071:CDS | 30.0% | |
AAAGTGAAAGTGAAGATGAA+GGG | + | chr1.2:55424162-55424181 | MS.gene32071:CDS | 30.0% | |
AAGCTATTTAGAGAATGGTA+TGG | - | chr1.2:55424089-55424108 | None:intergenic | 30.0% | |
AATCCTGTTTCAGTATAACT+TGG | + | chr1.2:55426954-55426973 | MS.gene32071:intron | 30.0% | |
ACTAAAAACATAGGGAACTT+GGG | - | chr1.2:55423205-55423224 | None:intergenic | 30.0% | |
AGAAATTTCTGTTATCTGTC+AGG | + | chr1.2:55427124-55427143 | MS.gene32071:CDS | 30.0% | |
AGATTCCATTGATGAAAACA+AGG | - | chr1.2:55425445-55425464 | None:intergenic | 30.0% | |
AGGGTTTGATATTCTAGATA+GGG | + | chr1.2:55425539-55425558 | MS.gene32071:CDS | 30.0% | |
ATACTGAAACAGGATTTCTA+GGG | - | chr1.2:55426950-55426969 | None:intergenic | 30.0% | |
ATTGAATAGGTATGTATACC+TGG | - | chr1.2:55422964-55422983 | None:intergenic | 30.0% | |
ATTGGTCCTTTAATCTTTAG+GGG | + | chr1.2:55426304-55426323 | MS.gene32071:intron | 30.0% | |
CAAGGTTTATAAATGCTACA+GGG | - | chr1.2:55424334-55424353 | None:intergenic | 30.0% | |
CCAATCGTTAACTAATCTAT+AGG | - | chr1.2:55426573-55426592 | None:intergenic | 30.0% | |
CCAGAAAACACTTTAATTGT+AGG | + | chr1.2:55423375-55423394 | MS.gene32071:intron | 30.0% | |
CGATGAAGCAAAAACAAATA+AGG | + | chr1.2:55425183-55425202 | MS.gene32071:CDS | 30.0% | |
CTTCTTCACATTATGTACAT+CGG | + | chr1.2:55424234-55424253 | MS.gene32071:CDS | 30.0% | |
GGAATTACAAGGAAAAGATA+AGG | + | chr1.2:55426438-55426457 | MS.gene32071:intron | 30.0% | |
GGATGTCATTGTTGAAAATT+TGG | + | chr1.2:55424784-55424803 | MS.gene32071:CDS | 30.0% | |
GTAGCATTTATAAACCTTGA+AGG | + | chr1.2:55424335-55424354 | MS.gene32071:CDS | 30.0% | |
TATACTGAAACAGGATTTCT+AGG | - | chr1.2:55426951-55426970 | None:intergenic | 30.0% | |
TATCCAAGTTATACTGAAAC+AGG | - | chr1.2:55426960-55426979 | None:intergenic | 30.0% | |
TCAAGGTTTATAAATGCTAC+AGG | - | chr1.2:55424335-55424354 | None:intergenic | 30.0% | |
TTACTGTAACATTCAGATCT+GGG | - | chr1.2:55424292-55424311 | None:intergenic | 30.0% | |
TTCAAACGCTATAATTGCAT+GGG | - | chr1.2:55423228-55423247 | None:intergenic | 30.0% | |
TTCTTCACATTATGTACATC+GGG | + | chr1.2:55424235-55424254 | MS.gene32071:CDS | 30.0% | |
TTGAATAGGTATGTATACCT+GGG | - | chr1.2:55422963-55422982 | None:intergenic | 30.0% | |
TTTCAAACGCTATAATTGCA+TGG | - | chr1.2:55423229-55423248 | None:intergenic | 30.0% | |
! | ACAATGCTCTTATTGATGAT+GGG | + | chr1.2:55427369-55427388 | MS.gene32071:CDS | 30.0% |
! | ACTAATCTATAGGCTTTGAT+TGG | - | chr1.2:55426563-55426582 | None:intergenic | 30.0% |
! | CCTATAGATTAGTTAACGAT+TGG | + | chr1.2:55426570-55426589 | MS.gene32071:intron | 30.0% |
! | CTAATCTATAGGCTTTGATT+GGG | - | chr1.2:55426562-55426581 | None:intergenic | 30.0% |
! | CTTGTTAAAAGTATGGATGT+TGG | + | chr1.2:55424206-55424225 | MS.gene32071:CDS | 30.0% |
! | TGTTGCTTATAGTCGTTATT+GGG | + | chr1.2:55423279-55423298 | MS.gene32071:intron | 30.0% |
! | TTGAGATTATCGGATTTTCA+AGG | + | chr1.2:55423503-55423522 | MS.gene32071:intron | 30.0% |
! | TTGTTGCTTATAGTCGTTAT+TGG | + | chr1.2:55423278-55423297 | MS.gene32071:intron | 30.0% |
!! | AGCGAATGAATTTAGCTTTA+TGG | - | chr1.2:55426521-55426540 | None:intergenic | 30.0% |
!! | AGCTAGTGAAAATTTTGATC+AGG | + | chr1.2:55424751-55424770 | MS.gene32071:CDS | 30.0% |
!! | AGTATTGATAGTTCAATACC+AGG | - | chr1.2:55426790-55426809 | None:intergenic | 30.0% |
!! | CCGAATTTGTTAACTTCAAT+TGG | + | chr1.2:55423080-55423099 | MS.gene32071:intron | 30.0% |
!! | CCTACAATTAAAGTGTTTTC+TGG | - | chr1.2:55423378-55423397 | None:intergenic | 30.0% |
!! | CTAAATAGCTTGCTTTGAAA+CGG | + | chr1.2:55424098-55424117 | MS.gene32071:intron | 30.0% |
!! | CTTTTTGTTTAACTTTGCAG+AGG | + | chr1.2:55427101-55427120 | MS.gene32071:intron | 30.0% |
!! | GCTAGTGAAAATTTTGATCA+GGG | + | chr1.2:55424752-55424771 | MS.gene32071:CDS | 30.0% |
!!! | ATTTGTTTTTGCTTCATCGA+TGG | - | chr1.2:55425182-55425201 | None:intergenic | 30.0% |
!!! | GAAAACCTTGTTTTCATCAA+TGG | + | chr1.2:55425437-55425456 | MS.gene32071:intron | 30.0% |
AAAACTGTGGCATCTAATGT+GGG | + | chr1.2:55427251-55427270 | MS.gene32071:CDS | 35.0% | |
AAAATCCATTTGATGTCTCC+TGG | - | chr1.2:55424724-55424743 | None:intergenic | 35.0% | |
AAATCCATTTGATGTCTCCT+GGG | - | chr1.2:55424723-55424742 | None:intergenic | 35.0% | |
AAGAAGCAAATGACATGGTT+CGG | + | chr1.2:55425595-55425614 | MS.gene32071:intron | 35.0% | |
AAGTGAAAGTGAAGATGAAG+GGG | + | chr1.2:55424163-55424182 | MS.gene32071:CDS | 35.0% | |
ACGTAACTGTAAAGATGAGA+AGG | - | chr1.2:55426677-55426696 | None:intergenic | 35.0% | |
AGAAAGTGAACAAACCTTCA+AGG | - | chr1.2:55424352-55424371 | None:intergenic | 35.0% | |
ATACAGGCAAAGAAAGAAAC+AGG | - | chr1.2:55423873-55423892 | None:intergenic | 35.0% | |
ATGAAACCAGTCAATTGCTT+GGG | + | chr1.2:55424651-55424670 | MS.gene32071:CDS | 35.0% | |
ATTACTTTCTTATTGGGGGA+TGG | + | chr1.2:55423436-55423455 | MS.gene32071:intron | 35.0% | |
ATTGATGAGAATACGACTCT+AGG | + | chr1.2:55425115-55425134 | MS.gene32071:CDS | 35.0% | |
CAAACAATCTGAATGAAGAG+TGG | + | chr1.2:55424897-55424916 | MS.gene32071:CDS | 35.0% | |
CACAATGCTCTTATTGATGA+TGG | + | chr1.2:55427368-55427387 | MS.gene32071:CDS | 35.0% | |
CTAATCGAGATTCAAGACTT+TGG | - | chr1.2:55426037-55426056 | None:intergenic | 35.0% | |
CTGTTGAAGATACTGATGTT+GGG | + | chr1.2:55424495-55424514 | MS.gene32071:CDS | 35.0% | |
GAAAGTGAAAGTGAAGATGA+AGG | + | chr1.2:55424161-55424180 | MS.gene32071:CDS | 35.0% | |
GACTAAAAACATAGGGAACT+TGG | - | chr1.2:55423206-55423225 | None:intergenic | 35.0% | |
GACTCTAAACTGGGTAAATA+TGG | - | chr1.2:55426600-55426619 | None:intergenic | 35.0% | |
GAGATATTACACTAGGAATG+TGG | + | chr1.2:55423813-55423832 | MS.gene32071:intron | 35.0% | |
GAGGGTTTGATATTCTAGAT+AGG | + | chr1.2:55425538-55425557 | MS.gene32071:CDS | 35.0% | |
GCTTGAAAAGCTTGAAAAAG+AGG | + | chr1.2:55426088-55426107 | MS.gene32071:CDS | 35.0% | |
GGTTTCATCATTTAACTCAC+TGG | - | chr1.2:55424639-55424658 | None:intergenic | 35.0% | |
GTTACTGTAACATTCAGATC+TGG | - | chr1.2:55424293-55424312 | None:intergenic | 35.0% | |
GTTGAAAATTTGGCATCTTC+AGG | + | chr1.2:55424794-55424813 | MS.gene32071:CDS | 35.0% | |
GTTTCTTTCTTTGCCTGTAT+AGG | + | chr1.2:55423873-55423892 | MS.gene32071:intron | 35.0% | |
TATCTCTAGTGAAATTTCCC+AGG | + | chr1.2:55424703-55424722 | MS.gene32071:CDS | 35.0% | |
TCTCAACCCCTAAAGATTAA+AGG | - | chr1.2:55426313-55426332 | None:intergenic | 35.0% | |
TCTTATCAACTTGATGAGAG+AGG | + | chr1.2:55425464-55425483 | MS.gene32071:CDS | 35.0% | |
TGAATAGGTATGTATACCTG+GGG | - | chr1.2:55422962-55422981 | None:intergenic | 35.0% | |
TGCATGGGACTAAAAACATA+GGG | - | chr1.2:55423213-55423232 | None:intergenic | 35.0% | |
TGGAATGGTTACATCAATCA+TGG | + | chr1.2:55423456-55423475 | MS.gene32071:intron | 35.0% | |
TTGAGATCCTCTCCATTTAA+TGG | + | chr1.2:55426327-55426346 | MS.gene32071:intron | 35.0% | |
TTGCATGGGACTAAAAACAT+AGG | - | chr1.2:55423214-55423233 | None:intergenic | 35.0% | |
TTGCTTGGGGTAAATAATGA+TGG | + | chr1.2:55424665-55424684 | MS.gene32071:CDS | 35.0% | |
TTGTCTCTGCAACATTCTAT+TGG | + | chr1.2:55426810-55426829 | MS.gene32071:intron | 35.0% | |
! | ATACCTTGCTTGCTTTGAAT+TGG | + | chr1.2:55424392-55424411 | MS.gene32071:intron | 35.0% |
! | ATCTAGAATATCAAACCCTC+CGG | - | chr1.2:55425538-55425557 | None:intergenic | 35.0% |
! | ATTTAATGGACACTCCCATT+TGG | + | chr1.2:55426341-55426360 | MS.gene32071:intron | 35.0% |
! | TCTAGAACAAGAAGCAATGA+TGG | + | chr1.2:55426130-55426149 | MS.gene32071:CDS | 35.0% |
! | TTTTGACAAAGATGCAGAAC+TGG | + | chr1.2:55427400-55427419 | MS.gene32071:CDS | 35.0% |
!! | AAATGGGAGTGTCCATTAAA+TGG | - | chr1.2:55426342-55426361 | None:intergenic | 35.0% |
!! | AATACACGTTGGCTTTGATT+GGG | + | chr1.2:55426417-55426436 | MS.gene32071:intron | 35.0% |
!! | ACTTTTTATTTGCAGCATGC+TGG | + | chr1.2:55425711-55425730 | MS.gene32071:intron | 35.0% |
!! | AGGAGACATCAAATGGATTT+TGG | + | chr1.2:55424723-55424742 | MS.gene32071:CDS | 35.0% |
!! | ATTAGATGCCACAGTTTTGT+GGG | - | chr1.2:55427249-55427268 | None:intergenic | 35.0% |
!! | CTTTTTATTTGCAGCATGCT+GGG | + | chr1.2:55425712-55425731 | MS.gene32071:intron | 35.0% |
!! | TAATACACGTTGGCTTTGAT+TGG | + | chr1.2:55426416-55426435 | MS.gene32071:intron | 35.0% |
!! | TACTGTGTTGACTCTAAACT+GGG | - | chr1.2:55426609-55426628 | None:intergenic | 35.0% |
!! | TTTTTATTTGCAGCATGCTG+GGG | + | chr1.2:55425713-55425732 | MS.gene32071:intron | 35.0% |
!!! | TAGTGGGTTTTAATACACGT+TGG | + | chr1.2:55426406-55426425 | MS.gene32071:intron | 35.0% |
AAACAGTGTCTCAAGTTCAG+GGG | + | chr1.2:55425029-55425048 | MS.gene32071:CDS | 40.0% | |
AAGAAGCAGGTATCAGTAAC+AGG | - | chr1.2:55423843-55423862 | None:intergenic | 40.0% | |
ACACCAATTCAAAGCAAGCA+AGG | - | chr1.2:55424398-55424417 | None:intergenic | 40.0% | |
ACAGATAAATGTTGCAGAGG+AGG | + | chr1.2:55424841-55424860 | MS.gene32071:CDS | 40.0% | |
ACTATCTGCGATACAAGTCA+CGG | + | chr1.2:55424956-55424975 | MS.gene32071:CDS | 40.0% | |
AGAAGGTAGTACAGGAATCA+CGG | + | chr1.2:55426153-55426172 | MS.gene32071:CDS | 40.0% | |
AGATGAGTATCAAGCCATGT+TGG | + | chr1.2:55425563-55425582 | MS.gene32071:CDS | 40.0% | |
AGCAGAAATGTTGAGGAAAG+CGG | + | chr1.2:55426061-55426080 | MS.gene32071:CDS | 40.0% | |
AGCGATAGAAGACTTATTCG+TGG | - | chr1.2:55423774-55423793 | None:intergenic | 40.0% | |
AGTTGCATCTTAGCTTCTTC+TGG | + | chr1.2:55427218-55427237 | MS.gene32071:CDS | 40.0% | |
ATCCAGTCCACAAGAAGAAT+CGG | - | chr1.2:55424579-55424598 | None:intergenic | 40.0% | |
ATTGGGAGTTAGGAAAGGAA+TGG | - | chr1.2:55426545-55426564 | None:intergenic | 40.0% | |
ATTTACCCCAAGCAATTGAC+TGG | - | chr1.2:55424660-55424679 | None:intergenic | 40.0% | |
ATTTCCCAGGAGACATCAAA+TGG | + | chr1.2:55424716-55424735 | MS.gene32071:CDS | 40.0% | |
CAAAACTGTGGCATCTAATG+TGG | + | chr1.2:55427250-55427269 | MS.gene32071:CDS | 40.0% | |
CAAACAGTGTCTCAAGTTCA+GGG | + | chr1.2:55425028-55425047 | MS.gene32071:CDS | 40.0% | |
CAAAGCAAGCAAGGTATAGA+TGG | - | chr1.2:55424389-55424408 | None:intergenic | 40.0% | |
CATTGTCTCTCTCTCCAAAT+GGG | - | chr1.2:55426358-55426377 | None:intergenic | 40.0% | |
CCAACATCAGTATCTTCAAC+AGG | - | chr1.2:55424497-55424516 | None:intergenic | 40.0% | |
CCCACCATTGAAAACAATTG+GGG | - | chr1.2:55427324-55427343 | None:intergenic | 40.0% | |
CCCCACCATTGAAAACAATT+GGG | - | chr1.2:55427325-55427344 | None:intergenic | 40.0% | |
CCTGTTGAAGATACTGATGT+TGG | + | chr1.2:55424494-55424513 | MS.gene32071:CDS | 40.0% | |
CGCTAAAGAAGCAAATGACA+TGG | + | chr1.2:55425590-55425609 | MS.gene32071:CDS | 40.0% | |
CTCAAGCATATCAATACTGC+AGG | - | chr1.2:55425155-55425174 | None:intergenic | 40.0% | |
CTTTGATTGGGAGTTAGGAA+AGG | - | chr1.2:55426550-55426569 | None:intergenic | 40.0% | |
GATGAAACCAGTCAATTGCT+TGG | + | chr1.2:55424650-55424669 | MS.gene32071:CDS | 40.0% | |
GGAACAGATAAATGTTGCAG+AGG | + | chr1.2:55424838-55424857 | MS.gene32071:CDS | 40.0% | |
GGAAGCTGAAGAGAATTCAA+AGG | + | chr1.2:55426187-55426206 | MS.gene32071:CDS | 40.0% | |
GTCTCTTGCAATTCTTGATG+AGG | + | chr1.2:55425821-55425840 | MS.gene32071:CDS | 40.0% | |
TAAAAGTAGACTCACCTTCC+AGG | - | chr1.2:55424053-55424072 | None:intergenic | 40.0% | |
TACTGCAGGCTGGATTATAT+TGG | - | chr1.2:55425141-55425160 | None:intergenic | 40.0% | |
TATCAACTTGATGAGAGAGG+TGG | + | chr1.2:55425467-55425486 | MS.gene32071:CDS | 40.0% | |
TATTACACTAGGAATGTGGC+TGG | + | chr1.2:55423817-55423836 | MS.gene32071:intron | 40.0% | |
TCAAACAGTGTCTCAAGTTC+AGG | + | chr1.2:55425027-55425046 | MS.gene32071:CDS | 40.0% | |
TCATTGTCTCTCTCTCCAAA+TGG | - | chr1.2:55426359-55426378 | None:intergenic | 40.0% | |
TCCATGACTAACAATGGCAA+TGG | + | chr1.2:55424869-55424888 | MS.gene32071:CDS | 40.0% | |
TCCATTGCCATTGTTAGTCA+TGG | - | chr1.2:55424873-55424892 | None:intergenic | 40.0% | |
TCCCCACCATTGAAAACAAT+TGG | - | chr1.2:55427326-55427345 | None:intergenic | 40.0% | |
TCTTTCCGACTAACTGAGAT+CGG | + | chr1.2:55425933-55425952 | MS.gene32071:intron | 40.0% | |
TCTTTCTTTGCCTGTATAGG+TGG | + | chr1.2:55423876-55423895 | MS.gene32071:intron | 40.0% | |
TGAAAAAGAGGAATCGGCAA+GGG | + | chr1.2:55426100-55426119 | MS.gene32071:CDS | 40.0% | |
TGAAACCAGTCAATTGCTTG+GGG | + | chr1.2:55424652-55424671 | MS.gene32071:CDS | 40.0% | |
TGAATCTTCAGATGAAAGCG+AGG | + | chr1.2:55424442-55424461 | MS.gene32071:intron | 40.0% | |
TGATTCCGATCTCAGTTAGT+CGG | - | chr1.2:55425941-55425960 | None:intergenic | 40.0% | |
TGGGGAAATTTATGGCGAAA+AGG | + | chr1.2:55425731-55425750 | MS.gene32071:CDS | 40.0% | |
TGTATATCACGTGTTGGAGA+CGG | + | chr1.2:55424817-55424836 | MS.gene32071:CDS | 40.0% | |
TTAGAGTCAACACAGTAGTG+AGG | + | chr1.2:55426612-55426631 | MS.gene32071:intron | 40.0% | |
TTATGGCGAAAAGGCAATTC+TGG | + | chr1.2:55425740-55425759 | MS.gene32071:CDS | 40.0% | |
TTCAGGTGTATATCACGTGT+TGG | + | chr1.2:55424811-55424830 | MS.gene32071:CDS | 40.0% | |
TTGAAAAAGAGGAATCGGCA+AGG | + | chr1.2:55426099-55426118 | MS.gene32071:CDS | 40.0% | |
TTGGGAGTTAGGAAAGGAAT+GGG | - | chr1.2:55426544-55426563 | None:intergenic | 40.0% | |
TTTCTTATTGGGGGATGGAA+TGG | + | chr1.2:55423441-55423460 | MS.gene32071:intron | 40.0% | |
! | AATGATGGAGAAGGTAGTAC+AGG | + | chr1.2:55426145-55426164 | MS.gene32071:CDS | 40.0% |
! | ACAAGAAGCAATGATGGAGA+AGG | + | chr1.2:55426136-55426155 | MS.gene32071:CDS | 40.0% |
! | ATAGGCTTTGATTGGGAGTT+AGG | - | chr1.2:55426555-55426574 | None:intergenic | 40.0% |
! | ATGAAATGGTTTGGAAGCAG+AGG | - | chr1.2:55426225-55426244 | None:intergenic | 40.0% |
! | CATTAGATGCCACAGTTTTG+TGG | - | chr1.2:55427250-55427269 | None:intergenic | 40.0% |
! | CCCAATTGTTTTCAATGGTG+GGG | + | chr1.2:55427322-55427341 | MS.gene32071:CDS | 40.0% |
! | CCCCAATTGTTTTCAATGGT+GGG | + | chr1.2:55427321-55427340 | MS.gene32071:CDS | 40.0% |
! | GCAGCTTTGATGATTTGTAC+AGG | - | chr1.2:55424557-55424576 | None:intergenic | 40.0% |
! | GGCTTTGATTGGGAATTACA+AGG | + | chr1.2:55426427-55426446 | MS.gene32071:intron | 40.0% |
! | GTGGGTAGATTTTGTTCCTA+CGG | + | chr1.2:55424916-55424935 | MS.gene32071:CDS | 40.0% |
! | TGAAGATGAAGGGGAGATTT+TGG | + | chr1.2:55424172-55424191 | MS.gene32071:CDS | 40.0% |
! | TTTGCTCGATATTTTTCCCC+AGG | + | chr1.2:55422943-55422962 | MS.gene32071:CDS | 40.0% |
!! | ATGCTCTTATTGATGATGGG+TGG | + | chr1.2:55427372-55427391 | MS.gene32071:CDS | 40.0% |
!! | CTACTGTGTTGACTCTAAAC+TGG | - | chr1.2:55426610-55426629 | None:intergenic | 40.0% |
!! | CTGCAGTATTGATATGCTTG+AGG | + | chr1.2:55425153-55425172 | MS.gene32071:CDS | 40.0% |
!! | GCTGTGAATGATTTGCTCAA+AGG | - | chr1.2:55427188-55427207 | None:intergenic | 40.0% |
!! | TGCTCTTATTGATGATGGGT+GGG | + | chr1.2:55427373-55427392 | MS.gene32071:CDS | 40.0% |
!!! | GGTTTTGGAATTTGCAAGGT+CGG | + | chr1.2:55423316-55423335 | MS.gene32071:intron | 40.0% |
AAAGATGCAGAACTGGACTC+TGG | + | chr1.2:55427407-55427426 | MS.gene32071:CDS | 45.0% | |
AAAGCGAGGATGAAGGGAAA+AGG | + | chr1.2:55424456-55424475 | MS.gene32071:CDS | 45.0% | |
AAATCTGCCAGCTCTTCTTC+TGG | + | chr1.2:55424266-55424285 | MS.gene32071:CDS | 45.0% | |
AACCTGGAATCCACCTATAC+AGG | - | chr1.2:55423889-55423908 | None:intergenic | 45.0% | |
ACACTCGAAGGATGCTGATA+TGG | + | chr1.2:55423930-55423949 | MS.gene32071:CDS | 45.0% | |
ACAGTTACGTGAGTTCCTGA+TGG | + | chr1.2:55426687-55426706 | MS.gene32071:intron | 45.0% | |
AGAGTCATAGTGAACCTGGA+AGG | + | chr1.2:55424036-55424055 | MS.gene32071:CDS | 45.0% | |
AGCATATCAATACTGCAGGC+TGG | - | chr1.2:55425151-55425170 | None:intergenic | 45.0% | |
AGTGGCTATTGAACACTCGA+AGG | + | chr1.2:55423918-55423937 | MS.gene32071:CDS | 45.0% | |
AGTTAGTCGGAAAGATGCTC+GGG | - | chr1.2:55425928-55425947 | None:intergenic | 45.0% | |
CAAAATAGACCTCCCATGCA+AGG | - | chr1.2:55426496-55426515 | None:intergenic | 45.0% | |
CAGATGAAAGCGAGGATGAA+GGG | + | chr1.2:55424450-55424469 | MS.gene32071:intron | 45.0% | |
CAGCATGCTGGGGAAATTTA+TGG | + | chr1.2:55425723-55425742 | MS.gene32071:intron | 45.0% | |
CAGTTAGTCGGAAAGATGCT+CGG | - | chr1.2:55425929-55425948 | None:intergenic | 45.0% | |
CCAGGTTCACTATGACTCTA+GGG | - | chr1.2:55424035-55424054 | None:intergenic | 45.0% | |
GCATCATAATCTTCAGCCGT+AGG | - | chr1.2:55424935-55424954 | None:intergenic | 45.0% | |
GCTGCTTCCATGACTAACAA+TGG | + | chr1.2:55424863-55424882 | MS.gene32071:CDS | 45.0% | |
GGAAAAGATAAGGGAGCAGA+AGG | + | chr1.2:55426448-55426467 | MS.gene32071:intron | 45.0% | |
TAGAATATCAAACCCTCCGG+TGG | - | chr1.2:55425535-55425554 | None:intergenic | 45.0% | |
TAGCTGCAGCAGAAATGTTG+AGG | + | chr1.2:55426054-55426073 | MS.gene32071:CDS | 45.0% | |
TAGGGTTTGTATCCCGTGAA+GGG | - | chr1.2:55424017-55424036 | None:intergenic | 45.0% | |
TCAGATGAAAGCGAGGATGA+AGG | + | chr1.2:55424449-55424468 | MS.gene32071:intron | 45.0% | |
TCCAGGTTCACTATGACTCT+AGG | - | chr1.2:55424036-55424055 | None:intergenic | 45.0% | |
TGCAAATTCCAAAACCGTCG+CGG | - | chr1.2:55423312-55423331 | None:intergenic | 45.0% | |
TGGGTCGTCTTCATCATCAT+TGG | + | chr1.2:55424514-55424533 | MS.gene32071:CDS | 45.0% | |
TGGTTCATCCCACAAAACTG+TGG | + | chr1.2:55427238-55427257 | MS.gene32071:CDS | 45.0% | |
TTCTTTAGCGTGCACCAACA+TGG | - | chr1.2:55425580-55425599 | None:intergenic | 45.0% | |
! | AGAGTCTTCTGACTCGATCA+AGG | - | chr1.2:55425002-55425021 | None:intergenic | 45.0% |
! | GCAGCCCCAATTGTTTTCAA+TGG | + | chr1.2:55427317-55427336 | MS.gene32071:CDS | 45.0% |
! | GCCCCAATTGTTTTCAATGG+TGG | + | chr1.2:55427320-55427339 | MS.gene32071:CDS | 45.0% |
! | GGAGTGTCCATTAAATGGAG+AGG | - | chr1.2:55426337-55426356 | None:intergenic | 45.0% |
! | TGAAGTACTCAAGATCACCC+AGG | + | chr1.2:55427295-55427314 | MS.gene32071:CDS | 45.0% |
! | TTTTGATCAGGGACGACTTG+TGG | + | chr1.2:55424763-55424782 | MS.gene32071:CDS | 45.0% |
!! | AAAGCTGCCGATTCTTCTTG+TGG | + | chr1.2:55424569-55424588 | MS.gene32071:CDS | 45.0% |
!! | AAGAGCATTGTGTTCAGCCT+TGG | - | chr1.2:55427360-55427379 | None:intergenic | 45.0% |
!! | TGTTTTCAATGGTGGGGAAG+AGG | + | chr1.2:55427328-55427347 | MS.gene32071:CDS | 45.0% |
!!! | CGACGGTTTTGGAATTTGCA+AGG | + | chr1.2:55423312-55423331 | MS.gene32071:intron | 45.0% |
!!! | GCTACAGGGCTTTTAACTTG+TGG | - | chr1.2:55424320-55424339 | None:intergenic | 45.0% |
AACAGGCATCAGCAAGAAGC+AGG | - | chr1.2:55423856-55423875 | None:intergenic | 50.0% | |
AAGGGAGCAGAAGGAAGCAA+GGG | + | chr1.2:55426457-55426476 | MS.gene32071:intron | 50.0% | |
AATAGACCTCCCATGCAAGG+TGG | - | chr1.2:55426493-55426512 | None:intergenic | 50.0% | |
AATTCCAAAACCGTCGCGGT+AGG | - | chr1.2:55423308-55423327 | None:intergenic | 50.0% | |
AATTCTGGCGACTGAGCTGA+AGG | + | chr1.2:55425755-55425774 | MS.gene32071:CDS | 50.0% | |
AGGGTTTGTATCCCGTGAAG+GGG | - | chr1.2:55424016-55424035 | None:intergenic | 50.0% | |
ATAGACCTCCCATGCAAGGT+GGG | - | chr1.2:55426492-55426511 | None:intergenic | 50.0% | |
ATCCCTTTCACCAGACAAGC+TGG | - | chr1.2:55425799-55425818 | None:intergenic | 50.0% | |
ATGATAGCTCCCACCTTGCA+TGG | + | chr1.2:55426480-55426499 | MS.gene32071:intron | 50.0% | |
CCCTAGAGTCATAGTGAACC+TGG | + | chr1.2:55424032-55424051 | MS.gene32071:CDS | 50.0% | |
CGAGGATGAAGGGAAAAGGT+TGG | + | chr1.2:55424460-55424479 | MS.gene32071:CDS | 50.0% | |
CTAGGGTTTGTATCCCGTGA+AGG | - | chr1.2:55424018-55424037 | None:intergenic | 50.0% | |
CTGCGATACAAGTCACGGAT+TGG | + | chr1.2:55424961-55424980 | MS.gene32071:CDS | 50.0% | |
GAAAACAATTGGGGCTGCCT+GGG | - | chr1.2:55427315-55427334 | None:intergenic | 50.0% | |
GAAGGATGCTGATATGGCTG+CGG | + | chr1.2:55423936-55423955 | MS.gene32071:CDS | 50.0% | |
GATGAGAGAGGTGGAACATC+AGG | + | chr1.2:55425476-55425495 | MS.gene32071:CDS | 50.0% | |
GGCTGCGGAAGTTGTTCTTA+CGG | + | chr1.2:55423951-55423970 | MS.gene32071:CDS | 50.0% | |
GTCCAGCTTGTCTGGTGAAA+GGG | + | chr1.2:55425794-55425813 | MS.gene32071:CDS | 50.0% | |
TAAGGGAGCAGAAGGAAGCA+AGG | + | chr1.2:55426456-55426475 | MS.gene32071:intron | 50.0% | |
TACTTCCAGCATCCCCTTCA+CGG | + | chr1.2:55424001-55424020 | MS.gene32071:CDS | 50.0% | |
TCAGGAGAAACTTGCAGAGC+AGG | + | chr1.2:55425494-55425513 | MS.gene32071:CDS | 50.0% | |
TGAAAACAATTGGGGCTGCC+TGG | - | chr1.2:55427316-55427335 | None:intergenic | 50.0% | |
TGATAGCTCCCACCTTGCAT+GGG | + | chr1.2:55426481-55426500 | MS.gene32071:intron | 50.0% | |
TGTCCAGCTTGTCTGGTGAA+AGG | + | chr1.2:55425793-55425812 | MS.gene32071:CDS | 50.0% | |
! | AGGTGGATTCCAGGTTGTTG+AGG | + | chr1.2:55423893-55423912 | MS.gene32071:intron | 50.0% |
! | GGTGGATTCCAGGTTGTTGA+GGG | + | chr1.2:55423894-55423913 | MS.gene32071:intron | 50.0% |
! | GTGAGTTCCTGATGGATCGT+GGG | + | chr1.2:55426695-55426714 | MS.gene32071:CDS | 50.0% |
! | TGCCTGTATAGGTGGATTCC+AGG | + | chr1.2:55423884-55423903 | MS.gene32071:intron | 50.0% |
!! | TGCCGATTCTTCTTGTGGAC+TGG | + | chr1.2:55424574-55424593 | MS.gene32071:CDS | 50.0% |
AATATAGCAGCGACCACCGG+AGG | + | chr1.2:55425519-55425538 | MS.gene32071:CDS | 55.0% | |
ACTTCCAGCATCCCCTTCAC+GGG | + | chr1.2:55424002-55424021 | MS.gene32071:CDS | 55.0% | |
ATATAGCAGCGACCACCGGA+GGG | + | chr1.2:55425520-55425539 | MS.gene32071:CDS | 55.0% | |
ATCTGGGCCAGAAGAAGAGC+TGG | - | chr1.2:55424276-55424295 | None:intergenic | 55.0% | |
GCCAATATAGCAGCGACCAC+CGG | + | chr1.2:55425516-55425535 | MS.gene32071:CDS | 55.0% | |
GGAATCACGGAGACTACAGC+AGG | + | chr1.2:55426166-55426185 | MS.gene32071:CDS | 55.0% | |
TCACGTCTGTCCAGCTTGTC+TGG | + | chr1.2:55425786-55425805 | MS.gene32071:CDS | 55.0% | |
TCCGGTGGTCGCTGCTATAT+TGG | - | chr1.2:55425520-55425539 | None:intergenic | 55.0% | |
TTCCAGGTTGTTGAGGGCAG+TGG | + | chr1.2:55423900-55423919 | MS.gene32071:CDS | 55.0% | |
! | CGTGAGTTCCTGATGGATCG+TGG | + | chr1.2:55426694-55426713 | MS.gene32071:CDS | 55.0% |
AGCCACTGCCCTCAACAACC+TGG | - | chr1.2:55423905-55423924 | None:intergenic | 60.0% | |
CAACCTGCCCACGATCCATC+AGG | - | chr1.2:55426705-55426724 | None:intergenic | 60.0% | |
GTATCCCGTGAAGGGGATGC+TGG | - | chr1.2:55424009-55424028 | None:intergenic | 60.0% | |
TAGCTCCCACCTTGCATGGG+AGG | + | chr1.2:55426484-55426503 | MS.gene32071:intron | 60.0% | |
TATTGGGCCACCTACCGCGA+CGG | + | chr1.2:55423295-55423314 | MS.gene32071:intron | 60.0% | |
TCCAAAACCGTCGCGGTAGG+TGG | - | chr1.2:55423305-55423324 | None:intergenic | 60.0% | |
TGGGGAAGAGGAGAGCTCCA+AGG | + | chr1.2:55427340-55427359 | MS.gene32071:CDS | 60.0% | |
! | GTTCCTGATGGATCGTGGGC+AGG | + | chr1.2:55426699-55426718 | MS.gene32071:CDS | 60.0% |
! | GCCACCTACCGCGACGGTTT+TGG | + | chr1.2:55423301-55423320 | MS.gene32071:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 55422917 | 55427439 | 55422917 | ID=MS.gene32071 |
chr1.2 | mRNA | 55422917 | 55427439 | 55422917 | ID=MS.gene32071.t1;Parent=MS.gene32071 |
chr1.2 | exon | 55422917 | 55422964 | 55422917 | ID=MS.gene32071.t1.exon1;Parent=MS.gene32071.t1 |
chr1.2 | CDS | 55422917 | 55422964 | 55422917 | ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1 |
chr1.2 | exon | 55423895 | 55424057 | 55423895 | ID=MS.gene32071.t1.exon2;Parent=MS.gene32071.t1 |
chr1.2 | CDS | 55423895 | 55424057 | 55423895 | ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1 |
chr1.2 | exon | 55424159 | 55424356 | 55424159 | ID=MS.gene32071.t1.exon3;Parent=MS.gene32071.t1 |
chr1.2 | CDS | 55424159 | 55424356 | 55424159 | ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1 |
chr1.2 | exon | 55424453 | 55425204 | 55424453 | ID=MS.gene32071.t1.exon4;Parent=MS.gene32071.t1 |
chr1.2 | CDS | 55424453 | 55425204 | 55424453 | ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1 |
chr1.2 | exon | 55425438 | 55425611 | 55425438 | ID=MS.gene32071.t1.exon5;Parent=MS.gene32071.t1 |
chr1.2 | CDS | 55425438 | 55425611 | 55425438 | ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1 |
chr1.2 | exon | 55425726 | 55425842 | 55425726 | ID=MS.gene32071.t1.exon6;Parent=MS.gene32071.t1 |
chr1.2 | CDS | 55425726 | 55425842 | 55425726 | ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1 |
chr1.2 | exon | 55426029 | 55426208 | 55426029 | ID=MS.gene32071.t1.exon7;Parent=MS.gene32071.t1 |
chr1.2 | CDS | 55426029 | 55426208 | 55426029 | ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1 |
chr1.2 | exon | 55426691 | 55426737 | 55426691 | ID=MS.gene32071.t1.exon8;Parent=MS.gene32071.t1 |
chr1.2 | CDS | 55426691 | 55426737 | 55426691 | ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1 |
chr1.2 | exon | 55427121 | 55427439 | 55427121 | ID=MS.gene32071.t1.exon9;Parent=MS.gene32071.t1 |
chr1.2 | CDS | 55427121 | 55427439 | 55427121 | ID=cds.MS.gene32071.t1;Parent=MS.gene32071.t1 |
Gene Sequence |
Protein sequence |