Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32732.t1 | KEH35890.1 | 91.9 | 457 | 22 | 2 | 1 | 442 | 224 | 680 | 1.40E-239 | 838.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32732.t1 | O81078 | 52.0 | 446 | 177 | 7 | 11 | 442 | 331 | 753 | 2.9e-124 | 446.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32732.t1 | A0A072VCN2 | 91.9 | 457 | 22 | 2 | 1 | 442 | 224 | 680 | 1.0e-239 | 838.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene32732 | 0.805966 | 1.03E-49 | -1.69E-46 |
| MS.gene049151 | MS.gene32732 | 0.836893 | 7.17E-57 | -1.69E-46 |
| MS.gene049230 | MS.gene32732 | 0.828952 | 6.75E-55 | -1.69E-46 |
| MS.gene049378 | MS.gene32732 | 0.840834 | 6.85E-58 | -1.69E-46 |
| MS.gene049758 | MS.gene32732 | 0.809545 | 1.79E-50 | -1.69E-46 |
| MS.gene049910 | MS.gene32732 | 0.810255 | 1.26E-50 | -1.69E-46 |
| MS.gene050168 | MS.gene32732 | 0.807424 | 5.09E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene32732 | 0.849284 | 3.57E-60 | -1.69E-46 |
| MS.gene050227 | MS.gene32732 | 0.851643 | 7.76E-61 | -1.69E-46 |
| MS.gene050228 | MS.gene32732 | 0.848895 | 4.58E-60 | -1.69E-46 |
| MS.gene050398 | MS.gene32732 | 0.804298 | 2.31E-49 | -1.69E-46 |
| MS.gene050623 | MS.gene32732 | -0.859405 | 4.23E-63 | -1.69E-46 |
| MS.gene050642 | MS.gene32732 | 0.858959 | 5.76E-63 | -1.69E-46 |
| MS.gene050820 | MS.gene32732 | 0.805309 | 1.42E-49 | -1.69E-46 |
| MS.gene051373 | MS.gene32732 | 0.812828 | 3.48E-51 | -1.69E-46 |
| MS.gene051535 | MS.gene32732 | 0.823342 | 1.46E-53 | -1.69E-46 |
| MS.gene051860 | MS.gene32732 | 0.816003 | 6.92E-52 | -1.69E-46 |
| MS.gene051983 | MS.gene32732 | 0.877457 | 6.19E-69 | -1.69E-46 |
| MS.gene052077 | MS.gene32732 | 0.854768 | 9.88E-62 | -1.69E-46 |
| MS.gene052176 | MS.gene32732 | 0.830215 | 3.33E-55 | -1.69E-46 |
| MS.gene052309 | MS.gene32732 | -0.818239 | 2.17E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene32732 | 0.832502 | 9.11E-56 | -1.69E-46 |
| MS.gene052600 | MS.gene32732 | 0.807928 | 3.98E-50 | -1.69E-46 |
| MS.gene053494 | MS.gene32732 | 0.812858 | 3.43E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene32732 | 0.839601 | 1.44E-57 | -1.69E-46 |
| MS.gene054098 | MS.gene32732 | 0.813968 | 1.96E-51 | -1.69E-46 |
| MS.gene054349 | MS.gene32732 | 0.817897 | 2.60E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene32732 | 0.851851 | 6.78E-61 | -1.69E-46 |
| MS.gene054942 | MS.gene32732 | 0.800085 | 1.70E-48 | -1.69E-46 |
| MS.gene054983 | MS.gene32732 | 0.821293 | 4.36E-53 | -1.69E-46 |
| MS.gene05510 | MS.gene32732 | 0.816886 | 4.39E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene32732 | 0.820858 | 5.49E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene32732 | 0.832637 | 8.44E-56 | -1.69E-46 |
| MS.gene056612 | MS.gene32732 | 0.800629 | 1.32E-48 | -1.69E-46 |
| MS.gene056723 | MS.gene32732 | 0.80225 | 6.13E-49 | -1.69E-46 |
| MS.gene056979 | MS.gene32732 | 0.869743 | 2.46E-66 | -1.69E-46 |
| MS.gene057396 | MS.gene32732 | 0.815263 | 1.01E-51 | -1.69E-46 |
| MS.gene057754 | MS.gene32732 | 0.821794 | 3.34E-53 | -1.69E-46 |
| MS.gene058139 | MS.gene32732 | 0.80261 | 5.17E-49 | -1.69E-46 |
| MS.gene058142 | MS.gene32732 | 0.845043 | 5.19E-59 | -1.69E-46 |
| MS.gene058399 | MS.gene32732 | 0.801194 | 1.01E-48 | -1.69E-46 |
| MS.gene058435 | MS.gene32732 | 0.802452 | 5.57E-49 | -1.69E-46 |
| MS.gene058710 | MS.gene32732 | 0.814184 | 1.75E-51 | -1.69E-46 |
| MS.gene058749 | MS.gene32732 | 0.813815 | 2.11E-51 | -1.69E-46 |
| MS.gene059285 | MS.gene32732 | 0.824698 | 7.01E-54 | -1.69E-46 |
| MS.gene05984 | MS.gene32732 | 0.821196 | 4.59E-53 | -1.69E-46 |
| MS.gene059894 | MS.gene32732 | 0.839133 | 1.90E-57 | -1.69E-46 |
| MS.gene059899 | MS.gene32732 | 0.802886 | 4.54E-49 | -1.69E-46 |
| MS.gene060084 | MS.gene32732 | 0.806166 | 9.39E-50 | -1.69E-46 |
| MS.gene060297 | MS.gene32732 | 0.82763 | 1.41E-54 | -1.69E-46 |
| MS.gene060683 | MS.gene32732 | 0.812259 | 4.64E-51 | -1.69E-46 |
| MS.gene061049 | MS.gene32732 | 0.832507 | 9.09E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32732.t1 | MTR_3g105595 | 91.703 | 458 | 23 | 2 | 1 | 443 | 224 | 681 | 0.0 | 821 |
| MS.gene32732.t1 | MTR_3g105610 | 84.532 | 459 | 54 | 3 | 1 | 442 | 339 | 797 | 0.0 | 759 |
| MS.gene32732.t1 | MTR_8g073210 | 42.353 | 425 | 217 | 9 | 34 | 442 | 368 | 780 | 1.81e-98 | 316 |
| MS.gene32732.t1 | MTR_3g115910 | 39.954 | 433 | 232 | 9 | 28 | 444 | 355 | 775 | 3.78e-96 | 306 |
| MS.gene32732.t1 | MTR_3g115910 | 39.675 | 431 | 232 | 9 | 28 | 442 | 355 | 773 | 6.15e-94 | 303 |
| MS.gene32732.t1 | MTR_5g024350 | 39.120 | 432 | 231 | 11 | 29 | 442 | 362 | 779 | 9.95e-94 | 303 |
| MS.gene32732.t1 | MTR_5g024350 | 39.120 | 432 | 231 | 11 | 29 | 442 | 394 | 811 | 1.03e-93 | 304 |
| MS.gene32732.t1 | MTR_3g115910 | 39.675 | 431 | 232 | 9 | 28 | 442 | 400 | 818 | 1.24e-93 | 303 |
| MS.gene32732.t1 | MTR_2g088450 | 38.480 | 421 | 232 | 8 | 38 | 442 | 274 | 683 | 2.05e-90 | 292 |
| MS.gene32732.t1 | MTR_2g088450 | 38.480 | 421 | 232 | 8 | 38 | 442 | 307 | 716 | 6.46e-90 | 291 |
| MS.gene32732.t1 | MTR_2g088450 | 38.480 | 421 | 232 | 8 | 38 | 442 | 372 | 781 | 1.32e-89 | 292 |
| MS.gene32732.t1 | MTR_4g087925 | 39.573 | 422 | 228 | 9 | 34 | 443 | 355 | 761 | 5.41e-88 | 287 |
| MS.gene32732.t1 | MTR_2g015270 | 39.667 | 421 | 209 | 13 | 41 | 443 | 364 | 757 | 1.47e-83 | 278 |
| MS.gene32732.t1 | MTR_2g088450 | 43.114 | 334 | 179 | 6 | 38 | 370 | 372 | 695 | 1.90e-82 | 268 |
| MS.gene32732.t1 | MTR_8g073490 | 37.116 | 423 | 230 | 10 | 37 | 442 | 378 | 781 | 7.96e-82 | 271 |
| MS.gene32732.t1 | MTR_5g059920 | 35.885 | 418 | 238 | 11 | 39 | 443 | 361 | 761 | 1.14e-80 | 265 |
| MS.gene32732.t1 | MTR_5g059900 | 35.885 | 418 | 238 | 11 | 39 | 443 | 267 | 667 | 1.96e-80 | 264 |
| MS.gene32732.t1 | MTR_5g059920 | 35.885 | 418 | 238 | 11 | 39 | 443 | 361 | 761 | 1.26e-79 | 265 |
| MS.gene32732.t1 | MTR_2g088430 | 35.680 | 412 | 234 | 9 | 28 | 421 | 358 | 756 | 1.53e-74 | 251 |
| MS.gene32732.t1 | MTR_0018s0240 | 35.659 | 387 | 221 | 8 | 69 | 443 | 299 | 669 | 4.61e-73 | 246 |
| MS.gene32732.t1 | MTR_0018s0230 | 34.010 | 394 | 217 | 10 | 69 | 443 | 277 | 646 | 3.40e-72 | 241 |
| MS.gene32732.t1 | MTR_2g015260 | 35.407 | 418 | 223 | 13 | 41 | 443 | 173 | 558 | 6.21e-72 | 240 |
| MS.gene32732.t1 | MTR_0018s0230 | 34.010 | 394 | 217 | 10 | 69 | 443 | 277 | 646 | 3.77e-71 | 240 |
| MS.gene32732.t1 | MTR_8g073210 | 43.599 | 289 | 152 | 7 | 34 | 321 | 368 | 646 | 4.21e-68 | 229 |
| MS.gene32732.t1 | MTR_2g015310 | 32.401 | 429 | 226 | 13 | 37 | 443 | 352 | 738 | 2.71e-66 | 228 |
| MS.gene32732.t1 | MTR_2g015280 | 34.129 | 419 | 219 | 14 | 43 | 443 | 355 | 734 | 1.28e-65 | 227 |
| MS.gene32732.t1 | MTR_6g045087 | 35.890 | 326 | 185 | 5 | 138 | 442 | 39 | 361 | 6.07e-64 | 214 |
| MS.gene32732.t1 | MTR_2g015290 | 32.420 | 438 | 236 | 14 | 29 | 443 | 341 | 741 | 2.33e-63 | 221 |
| MS.gene32732.t1 | MTR_3g115910 | 40.636 | 283 | 157 | 6 | 28 | 309 | 355 | 627 | 4.15e-63 | 216 |
| MS.gene32732.t1 | MTR_3g115910 | 40.636 | 283 | 157 | 6 | 28 | 309 | 400 | 672 | 6.14e-63 | 216 |
| MS.gene32732.t1 | MTR_2g088450 | 40.636 | 283 | 157 | 6 | 38 | 319 | 274 | 546 | 1.51e-62 | 212 |
| MS.gene32732.t1 | MTR_8g073210 | 41.844 | 282 | 153 | 7 | 29 | 309 | 363 | 634 | 7.89e-62 | 212 |
| MS.gene32732.t1 | MTR_2g088450 | 40.636 | 283 | 157 | 6 | 38 | 319 | 372 | 644 | 9.36e-62 | 212 |
| MS.gene32732.t1 | MTR_2g088450 | 39.785 | 279 | 157 | 6 | 38 | 315 | 274 | 542 | 3.13e-58 | 200 |
| MS.gene32732.t1 | MTR_5g060330 | 38.095 | 189 | 106 | 5 | 39 | 226 | 267 | 445 | 2.08e-31 | 127 |
| MS.gene32732.t1 | MTR_8g073210 | 35.638 | 188 | 111 | 6 | 29 | 215 | 363 | 541 | 6.13e-24 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32732.t1 | AT2G29120 | 50.109 | 459 | 188 | 10 | 1 | 443 | 334 | 767 | 4.34e-150 | 451 |
| MS.gene32732.t1 | AT2G24720 | 50.000 | 458 | 204 | 6 | 1 | 443 | 322 | 769 | 5.84e-150 | 450 |
| MS.gene32732.t1 | AT2G24710 | 48.035 | 458 | 216 | 6 | 1 | 444 | 345 | 794 | 6.75e-144 | 431 |
| MS.gene32732.t1 | AT2G24710 | 47.921 | 457 | 216 | 6 | 1 | 443 | 321 | 769 | 1.27e-142 | 430 |
| MS.gene32732.t1 | AT2G24710 | 47.921 | 457 | 216 | 6 | 1 | 443 | 345 | 793 | 1.61e-142 | 431 |
| MS.gene32732.t1 | AT2G29100 | 51.304 | 460 | 178 | 8 | 7 | 443 | 320 | 756 | 3.28e-139 | 422 |
| MS.gene32732.t1 | AT2G29100 | 51.304 | 460 | 178 | 8 | 7 | 443 | 318 | 754 | 3.71e-139 | 422 |
| MS.gene32732.t1 | AT5G27100 | 46.930 | 456 | 214 | 6 | 1 | 443 | 322 | 762 | 1.03e-138 | 420 |
| MS.gene32732.t1 | AT2G29110 | 51.860 | 457 | 185 | 9 | 1 | 443 | 327 | 762 | 1.23e-138 | 421 |
| MS.gene32732.t1 | AT2G29110 | 51.974 | 456 | 184 | 9 | 1 | 442 | 328 | 762 | 1.36e-138 | 421 |
| MS.gene32732.t1 | AT5G11210 | 44.444 | 459 | 230 | 5 | 1 | 444 | 245 | 693 | 1.97e-137 | 411 |
| MS.gene32732.t1 | AT5G11210 | 44.444 | 459 | 230 | 5 | 1 | 444 | 253 | 701 | 3.55e-137 | 411 |
| MS.gene32732.t1 | AT5G11210 | 44.444 | 459 | 230 | 5 | 1 | 444 | 245 | 693 | 3.63e-137 | 411 |
| MS.gene32732.t1 | AT5G11210 | 44.444 | 459 | 230 | 5 | 1 | 444 | 245 | 693 | 3.63e-137 | 411 |
| MS.gene32732.t1 | AT5G11210 | 44.444 | 459 | 230 | 5 | 1 | 444 | 327 | 775 | 1.83e-136 | 411 |
| MS.gene32732.t1 | AT5G11210 | 44.444 | 459 | 230 | 5 | 1 | 444 | 327 | 775 | 1.99e-136 | 411 |
| MS.gene32732.t1 | AT5G11210 | 44.444 | 459 | 230 | 5 | 1 | 444 | 327 | 775 | 1.99e-136 | 411 |
| MS.gene32732.t1 | AT5G11210 | 44.201 | 457 | 230 | 5 | 1 | 442 | 245 | 691 | 6.19e-135 | 409 |
| MS.gene32732.t1 | AT5G11210 | 44.201 | 457 | 230 | 5 | 1 | 442 | 269 | 715 | 1.03e-134 | 409 |
| MS.gene32732.t1 | AT5G11210 | 44.201 | 457 | 230 | 5 | 1 | 442 | 327 | 773 | 4.43e-134 | 409 |
| MS.gene32732.t1 | AT4G31710 | 47.265 | 457 | 203 | 6 | 1 | 443 | 322 | 754 | 6.61e-134 | 407 |
| MS.gene32732.t1 | AT5G11180 | 43.886 | 458 | 235 | 6 | 1 | 442 | 326 | 777 | 9.61e-131 | 401 |
| MS.gene32732.t1 | AT4G31710 | 45.952 | 457 | 202 | 6 | 1 | 443 | 345 | 770 | 1.32e-128 | 394 |
| MS.gene32732.t1 | AT5G11180 | 37.555 | 458 | 203 | 9 | 1 | 442 | 326 | 716 | 2.05e-95 | 307 |
| MS.gene32732.t1 | AT1G42540 | 37.355 | 431 | 243 | 9 | 28 | 442 | 355 | 774 | 5.23e-90 | 293 |
| MS.gene32732.t1 | AT1G42540 | 37.355 | 431 | 243 | 9 | 28 | 442 | 355 | 774 | 5.23e-90 | 293 |
| MS.gene32732.t1 | AT1G42540 | 37.355 | 431 | 243 | 9 | 28 | 442 | 355 | 774 | 5.23e-90 | 293 |
| MS.gene32732.t1 | AT1G05200 | 36.879 | 423 | 238 | 9 | 38 | 443 | 393 | 803 | 2.35e-88 | 286 |
| MS.gene32732.t1 | AT1G05200 | 36.879 | 423 | 238 | 9 | 38 | 443 | 393 | 803 | 2.35e-88 | 286 |
| MS.gene32732.t1 | AT5G48400 | 40.528 | 417 | 214 | 13 | 41 | 449 | 353 | 743 | 2.07e-87 | 282 |
| MS.gene32732.t1 | AT1G05200 | 36.730 | 422 | 238 | 9 | 38 | 442 | 393 | 802 | 7.01e-87 | 285 |
| MS.gene32732.t1 | AT1G05200 | 36.730 | 422 | 238 | 9 | 38 | 442 | 393 | 802 | 7.01e-87 | 285 |
| MS.gene32732.t1 | AT1G05200 | 36.730 | 422 | 238 | 9 | 38 | 442 | 393 | 802 | 7.01e-87 | 285 |
| MS.gene32732.t1 | AT5G48410 | 40.723 | 415 | 215 | 11 | 41 | 449 | 351 | 740 | 7.89e-87 | 281 |
| MS.gene32732.t1 | AT4G35290 | 38.283 | 431 | 232 | 12 | 32 | 445 | 361 | 774 | 3.93e-86 | 280 |
| MS.gene32732.t1 | AT5G48400 | 40.389 | 411 | 212 | 12 | 41 | 443 | 353 | 738 | 9.60e-86 | 280 |
| MS.gene32732.t1 | AT2G17260 | 40.330 | 424 | 219 | 14 | 37 | 442 | 368 | 775 | 1.04e-85 | 281 |
| MS.gene32732.t1 | AT5G48410 | 40.587 | 409 | 213 | 10 | 41 | 443 | 351 | 735 | 3.40e-85 | 279 |
| MS.gene32732.t1 | AT4G35290 | 37.617 | 428 | 233 | 11 | 32 | 442 | 361 | 771 | 5.44e-84 | 276 |
| MS.gene32732.t1 | AT4G35290 | 37.617 | 428 | 233 | 11 | 32 | 442 | 361 | 771 | 5.44e-84 | 276 |
| MS.gene32732.t1 | AT4G35290 | 37.617 | 428 | 233 | 11 | 32 | 442 | 361 | 771 | 5.44e-84 | 276 |
| MS.gene32732.t1 | AT4G35290 | 37.617 | 428 | 233 | 11 | 32 | 442 | 361 | 771 | 5.44e-84 | 276 |
| MS.gene32732.t1 | AT4G35290 | 37.617 | 428 | 233 | 11 | 32 | 442 | 361 | 771 | 5.44e-84 | 276 |
| MS.gene32732.t1 | AT3G51480 | 36.156 | 437 | 246 | 10 | 29 | 449 | 352 | 771 | 6.20e-83 | 271 |
| MS.gene32732.t1 | AT2G32390 | 37.587 | 431 | 242 | 8 | 29 | 443 | 275 | 694 | 2.82e-82 | 271 |
| MS.gene32732.t1 | AT2G32390 | 37.587 | 431 | 242 | 8 | 29 | 443 | 319 | 738 | 3.57e-82 | 271 |
| MS.gene32732.t1 | AT2G32390 | 37.587 | 431 | 242 | 8 | 29 | 443 | 377 | 796 | 1.48e-81 | 271 |
| MS.gene32732.t1 | AT3G51480 | 37.592 | 407 | 221 | 10 | 52 | 442 | 285 | 674 | 7.15e-81 | 266 |
| MS.gene32732.t1 | AT3G51480 | 36.817 | 421 | 233 | 10 | 38 | 442 | 361 | 764 | 3.38e-80 | 266 |
| MS.gene32732.t1 | AT3G51480 | 36.817 | 421 | 233 | 10 | 38 | 442 | 361 | 764 | 3.38e-80 | 266 |
| MS.gene32732.t1 | AT2G32400 | 37.045 | 467 | 249 | 12 | 3 | 442 | 321 | 769 | 3.47e-79 | 264 |
| MS.gene32732.t1 | AT5G11210 | 46.850 | 254 | 119 | 3 | 204 | 442 | 13 | 265 | 5.03e-75 | 241 |
| MS.gene32732.t1 | AT3G07520 | 38.942 | 416 | 215 | 14 | 41 | 442 | 355 | 745 | 7.47e-75 | 251 |
| MS.gene32732.t1 | AT5G48410 | 37.164 | 409 | 200 | 11 | 41 | 443 | 351 | 708 | 2.83e-69 | 236 |
| MS.gene32732.t1 | AT5G48410 | 36.675 | 409 | 198 | 11 | 41 | 443 | 351 | 704 | 4.93e-67 | 229 |
| MS.gene32732.t1 | AT3G04110 | 31.787 | 431 | 243 | 11 | 30 | 453 | 326 | 712 | 6.52e-65 | 223 |
| MS.gene32732.t1 | AT2G32390 | 38.000 | 300 | 175 | 6 | 29 | 327 | 377 | 666 | 4.68e-64 | 219 |
| MS.gene32732.t1 | AT3G04110 | 31.354 | 421 | 241 | 9 | 30 | 443 | 326 | 705 | 5.24e-64 | 221 |
| MS.gene32732.t1 | AT1G42540 | 38.225 | 293 | 171 | 6 | 28 | 319 | 355 | 638 | 2.45e-63 | 216 |
| MS.gene32732.t1 | AT2G32390 | 36.577 | 298 | 178 | 6 | 29 | 325 | 377 | 664 | 8.70e-61 | 210 |
| MS.gene32732.t1 | AT2G32390 | 36.577 | 298 | 178 | 6 | 29 | 325 | 377 | 664 | 8.70e-61 | 210 |
| MS.gene32732.t1 | AT1G05200 | 37.024 | 289 | 169 | 7 | 38 | 324 | 393 | 670 | 4.85e-60 | 208 |
| MS.gene32732.t1 | AT2G32390 | 36.042 | 283 | 170 | 6 | 29 | 310 | 377 | 649 | 5.01e-55 | 194 |
| MS.gene32732.t1 | AT1G05200 | 36.364 | 275 | 162 | 7 | 38 | 310 | 393 | 656 | 1.65e-54 | 193 |
| MS.gene32732.t1 | AT3G04110 | 27.078 | 421 | 231 | 9 | 30 | 443 | 326 | 677 | 1.66e-46 | 172 |
Find 89 sgRNAs with CRISPR-Local
Find 135 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAAAAGAGAGTTGGATTT+TGG | 0.161309 | 3.3:-86830065 | MS.gene32732:CDS |
| ACATGTTATTATTGCCTATT+AGG | 0.190238 | 3.3:+86830001 | None:intergenic |
| TTGTCAAACACTAGATTTAA+TGG | 0.214752 | 3.3:-86830165 | MS.gene32732:CDS |
| GGAATTGGAGCCACTAAATT+TGG | 0.217370 | 3.3:-86830279 | MS.gene32732:CDS |
| TAAAGGGCTGTCTAGAAATT+TGG | 0.221465 | 3.3:-86830034 | MS.gene32732:CDS |
| CCCTATATTAAGCACTTTCT+TGG | 0.239631 | 3.3:-86828408 | MS.gene32732:CDS |
| TTTCTAGACAGCCCTTTATT+TGG | 0.250828 | 3.3:+86830039 | None:intergenic |
| AGCCACTCACATGGGATCTT+TGG | 0.252189 | 3.3:-86829389 | MS.gene32732:CDS |
| TTTATAAAAGGAAGTGTAAA+TGG | 0.252930 | 3.3:-86828459 | MS.gene32732:CDS |
| AAGTTTGGTATTTCACAAAA+TGG | 0.258351 | 3.3:-86830207 | MS.gene32732:CDS |
| TGTTCATTGGATTTGTTGTT+TGG | 0.263168 | 3.3:-86829344 | MS.gene32732:CDS |
| GCATGTTCATTTGTGTTCAT+TGG | 0.291980 | 3.3:-86829357 | MS.gene32732:CDS |
| GGATGGGAAATTCCTACTAT+TGG | 0.294555 | 3.3:-86829913 | MS.gene32732:CDS |
| CAAGATTTGTGGTGGTTGTA+TGG | 0.309269 | 3.3:-86828705 | MS.gene32732:CDS |
| ATCAGATTGGCACAAGCTTA+TGG | 0.317813 | 3.3:-86829275 | MS.gene32732:CDS |
| AGATTTAAAACTGGTGGCTT+TGG | 0.326155 | 3.3:-86828348 | MS.gene32732:CDS |
| ATAGAATAAACAATGATTTC+AGG | 0.330201 | 3.3:-86829311 | MS.gene32732:CDS |
| TTGGACACAGAAGGCCTAAT+AGG | 0.347096 | 3.3:-86830015 | MS.gene32732:CDS |
| TCCAAGAAAGTGCTTAATAT+AGG | 0.347975 | 3.3:+86828407 | None:intergenic |
| CCAAGAAAGTGCTTAATATA+GGG | 0.362025 | 3.3:+86828408 | None:intergenic |
| GCCACTCACATGGGATCTTT+GGG | 0.377419 | 3.3:-86829388 | MS.gene32732:CDS |
| GTTCATTGGATTTGTTGTTT+GGG | 0.383921 | 3.3:-86829343 | MS.gene32732:CDS |
| CCATGTGAGTGGCTTCAAAA+AGG | 0.389028 | 3.3:+86829398 | None:intergenic |
| CATTGTTTATTCTATGTTCA+AGG | 0.390884 | 3.3:+86829319 | None:intergenic |
| ACTAGATTTAATGGTCTTAG+TGG | 0.396942 | 3.3:-86830156 | MS.gene32732:CDS |
| TTGAGCGATCAACTCATTGT+AGG | 0.399010 | 3.3:+86829687 | None:intergenic |
| CTCATTGTAACCAAATTTAG+TGG | 0.401817 | 3.3:+86830269 | None:intergenic |
| GATGGGAAATTCCTACTATT+GGG | 0.406766 | 3.3:-86829912 | MS.gene32732:CDS |
| TGCATTAGCAATGGCTATTG+AGG | 0.408558 | 3.3:-86830307 | None:intergenic |
| GCTATTGAGGAAGTTGGAAT+TGG | 0.411599 | 3.3:-86830294 | MS.gene32732:CDS |
| GTAGGAATTTCCCATCCCTT+TGG | 0.420382 | 3.3:+86829919 | None:intergenic |
| GTTGAACCAAGATTTAAAAC+TGG | 0.428995 | 3.3:-86828357 | MS.gene32732:CDS |
| GCCAGTGGCTTGTGTTGAAT+TGG | 0.433601 | 3.3:+86829810 | None:intergenic |
| ATGATCTTGGGTCAATCATA+TGG | 0.436476 | 3.3:-86829963 | MS.gene32732:CDS |
| ACAATGCCATACACAGAATC+TGG | 0.438361 | 3.3:-86829471 | MS.gene32732:CDS |
| CTCAATTTCTTCCCAATAGT+AGG | 0.438788 | 3.3:+86829901 | None:intergenic |
| CTACTATTGGGAAGAAATTG+AGG | 0.438903 | 3.3:-86829900 | MS.gene32732:CDS |
| TCATCTTATTCTTTAGAAGT+TGG | 0.441150 | 3.3:+86828587 | None:intergenic |
| CAGAAATTTGATGCGGTAGT+GGG | 0.453072 | 3.3:-86829537 | MS.gene32732:CDS |
| AAGTCATATGGTAAGGCATA+AGG | 0.455526 | 3.3:+86829748 | None:intergenic |
| GCAAATCGAACAAAGTCATA+TGG | 0.457326 | 3.3:+86829736 | None:intergenic |
| ACAGAAATTTGATGCGGTAG+TGG | 0.468808 | 3.3:-86829538 | MS.gene32732:intron |
| GTTCCTGCCATCTCACCATC+AGG | 0.472388 | 3.3:+86829709 | None:intergenic |
| CTTGGGTCAATCATATGGCC+AGG | 0.478903 | 3.3:-86829958 | MS.gene32732:CDS |
| TAGAATAAACAATGATTTCA+GGG | 0.480077 | 3.3:-86829310 | MS.gene32732:CDS |
| AAGATTTGTGGTGGTTGTAT+GGG | 0.480530 | 3.3:-86828704 | MS.gene32732:CDS |
| GTCACACCAGATTCTGTGTA+TGG | 0.482816 | 3.3:+86829465 | None:intergenic |
| TATGAGATAATTAATGTGAT+TGG | 0.490156 | 3.3:-86830093 | MS.gene32732:CDS |
| TTGTTTCAATGAAAGACAAC+AGG | 0.492606 | 3.3:-86829437 | MS.gene32732:CDS |
| GCTTGTGTTGAATTGGTACT+AGG | 0.497766 | 3.3:+86829817 | None:intergenic |
| GCAATGGCTATTGAGGAAGT+TGG | 0.514964 | 3.3:-86830300 | MS.gene32732:CDS |
| TGATCGCTCAACTTTACGAC+GGG | 0.518428 | 3.3:-86829675 | MS.gene32732:CDS |
| GGTGATGGTGAAAAGAGAGT+TGG | 0.519922 | 3.3:-86830072 | MS.gene32732:CDS |
| GAGTAACTTGGCAAGATTTG+TGG | 0.524831 | 3.3:-86828716 | MS.gene32732:CDS |
| TGTACTCTATTCCAAAGGGA+TGG | 0.525388 | 3.3:-86829930 | MS.gene32732:CDS |
| TGGTGTACGTCTGTAATAGC+TGG | 0.533257 | 3.3:+86828607 | None:intergenic |
| TCGAACAAAGTCATATGGTA+AGG | 0.538162 | 3.3:+86829741 | None:intergenic |
| TCTTGACAGTTGAACAACTA+AGG | 0.538252 | 3.3:-86828630 | MS.gene32732:CDS |
| GGACCACTCTCTCATCAGAT+TGG | 0.543596 | 3.3:-86829288 | MS.gene32732:CDS |
| AGCATAGACCATAGTTGAGA+AGG | 0.554038 | 3.3:+86829248 | None:intergenic |
| GTACTCTATTCCAAAGGGAT+GGG | 0.554830 | 3.3:-86829929 | MS.gene32732:CDS |
| AGAAATTTGATGCGGTAGTG+GGG | 0.561352 | 3.3:-86829536 | MS.gene32732:CDS |
| GATATGTACTCTATTCCAAA+GGG | 0.562232 | 3.3:-86829934 | MS.gene32732:CDS |
| GAACCAAGATTTAAAACTGG+TGG | 0.563610 | 3.3:-86828354 | MS.gene32732:CDS |
| AAGCCTGATGGTGAGATGGC+AGG | 0.567308 | 3.3:-86829712 | MS.gene32732:CDS |
| TAGTTGTTCAAAGTATGTCA+TGG | 0.581001 | 3.3:-86828379 | MS.gene32732:CDS |
| AGAGAAAGTAGTGAGTAACT+TGG | 0.583063 | 3.3:-86828728 | MS.gene32732:CDS |
| TTGGGTCAATCATATGGCCA+GGG | 0.583817 | 3.3:-86829957 | MS.gene32732:CDS |
| GGAATAGAGTACATATCCCC+TGG | 0.583843 | 3.3:+86829940 | None:intergenic |
| ATAAAAGGAAGTGTAAATGG+TGG | 0.589834 | 3.3:-86828456 | MS.gene32732:CDS |
| ATAATTAATGTGATTGGTGA+TGG | 0.594746 | 3.3:-86830087 | MS.gene32732:CDS |
| GTTCGATTTGCAAAGCCTGA+TGG | 0.595979 | 3.3:-86829724 | MS.gene32732:CDS |
| ATTGGGAAGAAATTGAGGAT+AGG | 0.598398 | 3.3:-86829895 | MS.gene32732:CDS |
| ACCAATTCAACACAAGCCAC+TGG | 0.599399 | 3.3:-86829811 | MS.gene32732:CDS |
| TGCAAAGCCTGATGGTGAGA+TGG | 0.606948 | 3.3:-86829716 | MS.gene32732:CDS |
| GGATATGTACTCTATTCCAA+AGG | 0.607721 | 3.3:-86829935 | MS.gene32732:CDS |
| TCTAGAAATTTGGACACAGA+AGG | 0.618976 | 3.3:-86830024 | MS.gene32732:CDS |
| GAAATTTGATGCGGTAGTGG+GGG | 0.623597 | 3.3:-86829535 | MS.gene32732:CDS |
| CACAGAATCTGGTGTGACAA+TGG | 0.627498 | 3.3:-86829460 | MS.gene32732:CDS |
| TAACTTGGCAAGATTTGTGG+TGG | 0.641212 | 3.3:-86828713 | MS.gene32732:CDS |
| ACCCAAAGATCCCATGTGAG+TGG | 0.641569 | 3.3:+86829387 | None:intergenic |
| AGAATAAACAATGATTTCAG+GGG | 0.643917 | 3.3:-86829309 | MS.gene32732:CDS |
| GTGCCAATCTGATGAGAGAG+TGG | 0.645474 | 3.3:+86829285 | None:intergenic |
| GATATCAATGCAGAAGCCAG+TGG | 0.660734 | 3.3:+86829795 | None:intergenic |
| ATATAACAATCACTGCAAGT+AGG | 0.665993 | 3.3:-86829512 | MS.gene32732:CDS |
| TGGGTCAATCATATGGCCAG+GGG | 0.674510 | 3.3:-86829956 | MS.gene32732:CDS |
| TTGATCGCTCAACTTTACGA+CGG | 0.681279 | 3.3:-86829676 | MS.gene32732:CDS |
| GGATTGACAGAAATTTGATG+CGG | 0.685801 | 3.3:-86829544 | MS.gene32732:intron |
| GATCGCTCAACTTTACGACG+GGG | 0.742491 | 3.3:-86829674 | MS.gene32732:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGAATGAAAAAAATTATTT+TGG | - | chr3.3:86829040-86829059 | MS.gene32732:intron | 10.0% |
| !!! | AATTAAGATTTTATTCATAT+AGG | - | chr3.3:86829431-86829450 | MS.gene32732:CDS | 10.0% |
| !!! | TAAATTAAATTTGTTCAAGT+TGG | - | chr3.3:86829623-86829642 | MS.gene32732:intron | 15.0% |
| !!! | TTTTTTCATTCTTTTCATTT+TGG | + | chr3.3:86829033-86829052 | None:intergenic | 15.0% |
| !! | ATAGAATAAACAATGATTTC+AGG | - | chr3.3:86829294-86829313 | MS.gene32732:CDS | 20.0% |
| !! | CATAACAGTTACATTATTAA+GGG | - | chr3.3:86829488-86829507 | MS.gene32732:CDS | 20.0% |
| !! | GAATCATTAACATATATAAC+AGG | + | chr3.3:86828986-86829005 | None:intergenic | 20.0% |
| !! | GTGTAAAAACTTTAAACTTT+CGG | + | chr3.3:86829457-86829476 | None:intergenic | 20.0% |
| !! | TAGAATAAACAATGATTTCA+GGG | - | chr3.3:86829295-86829314 | MS.gene32732:CDS | 20.0% |
| !! | TATGAGATAATTAATGTGAT+TGG | - | chr3.3:86828512-86828531 | MS.gene32732:CDS | 20.0% |
| !! | TCATAACAGTTACATTATTA+AGG | - | chr3.3:86829487-86829506 | MS.gene32732:CDS | 20.0% |
| !!! | TAGTTAAATCCATTTTTAAC+TGG | + | chr3.3:86828740-86828759 | None:intergenic | 20.0% |
| !!! | TGTAATGAGCTTTTTATAAA+AGG | - | chr3.3:86830134-86830153 | MS.gene32732:CDS | 20.0% |
| !!! | TTGAACAAATTTAATTTACG+TGG | + | chr3.3:86829621-86829640 | None:intergenic | 20.0% |
| !!! | TTTATAAAAGGAAGTGTAAA+TGG | - | chr3.3:86830146-86830165 | MS.gene32732:CDS | 20.0% |
| !!! | TTTTGTTTATGGAATTTTGA+AGG | - | chr3.3:86830061-86830080 | MS.gene32732:CDS | 20.0% |
| ! | AAACTACTTAATCATTGCAA+AGG | - | chr3.3:86829556-86829575 | MS.gene32732:intron | 25.0% |
| ! | AACCTAGAAAATATACTTCA+AGG | - | chr3.3:86829741-86829760 | MS.gene32732:CDS | 25.0% |
| ! | AAGTTTGGTATTTCACAAAA+TGG | - | chr3.3:86828398-86828417 | MS.gene32732:CDS | 25.0% |
| ! | ACATGTTATTATTGCCTATT+AGG | + | chr3.3:86828607-86828626 | None:intergenic | 25.0% |
| ! | AGAATAAACAATGATTTCAG+GGG | - | chr3.3:86829296-86829315 | MS.gene32732:CDS | 25.0% |
| ! | AGATATTATATGAGAAGAAG+AGG | + | chr3.3:86828960-86828979 | None:intergenic | 25.0% |
| ! | ATAATTAATGTGATTGGTGA+TGG | - | chr3.3:86828518-86828537 | MS.gene32732:CDS | 25.0% |
| ! | CATTGTTTATTCTATGTTCA+AGG | + | chr3.3:86829289-86829308 | None:intergenic | 25.0% |
| ! | CTAAAGAATAAGATGAATGT+CGG | - | chr3.3:86830025-86830044 | MS.gene32732:CDS | 25.0% |
| ! | TAACTGTTATGATTGAATGA+CGG | + | chr3.3:86829479-86829498 | None:intergenic | 25.0% |
| ! | TAATGCGTTTAAATATGCTT+TGG | + | chr3.3:86829815-86829834 | None:intergenic | 25.0% |
| ! | TTGTCAAACACTAGATTTAA+TGG | - | chr3.3:86828440-86828459 | MS.gene32732:CDS | 25.0% |
| !! | ATACCAAACTTTTCAAAATC+AGG | + | chr3.3:86828389-86828408 | None:intergenic | 25.0% |
| !! | TCATCTTATTCTTTAGAAGT+TGG | + | chr3.3:86830021-86830040 | None:intergenic | 25.0% |
| !! | TTTTAGTCCTTACATAACAT+GGG | - | chr3.3:86829678-86829697 | MS.gene32732:CDS | 25.0% |
| !!! | AGCAAAAAGACATTTTTTAC+TGG | - | chr3.3:86829783-86829802 | MS.gene32732:CDS | 25.0% |
| !!! | ATTTTAGTCCTTACATAACA+TGG | - | chr3.3:86829677-86829696 | MS.gene32732:CDS | 25.0% |
| !!! | CTAGTTCTAAAAATGATCTT+GGG | - | chr3.3:86828630-86828649 | MS.gene32732:CDS | 25.0% |
| !!! | TAGTATCTCATTTTAATGAC+AGG | - | chr3.3:86829854-86829873 | MS.gene32732:CDS | 25.0% |
| !!! | TCTAGTTCTAAAAATGATCT+TGG | - | chr3.3:86828629-86828648 | MS.gene32732:CDS | 25.0% |
| ATAGGAGTTCCAGTTAAAAA+TGG | - | chr3.3:86828728-86828747 | MS.gene32732:CDS | 30.0% | |
| ATATAACAATCACTGCAAGT+AGG | - | chr3.3:86829093-86829112 | MS.gene32732:intron | 30.0% | |
| CGTTTAAATATGCTTTGGTT+TGG | + | chr3.3:86829810-86829829 | None:intergenic | 30.0% | |
| CTCATTGTAACCAAATTTAG+TGG | + | chr3.3:86828339-86828358 | None:intergenic | 30.0% | |
| GATATGTACTCTATTCCAAA+GGG | - | chr3.3:86828671-86828690 | MS.gene32732:CDS | 30.0% | |
| TACTTCAAGGACTAAACATA+AGG | - | chr3.3:86829754-86829773 | MS.gene32732:CDS | 30.0% | |
| TAGTTGTTCAAAGTATGTCA+TGG | - | chr3.3:86830226-86830245 | MS.gene32732:CDS | 30.0% | |
| TTGTTTCAATGAAAGACAAC+AGG | - | chr3.3:86829168-86829187 | MS.gene32732:intron | 30.0% | |
| ! | ACTAGATTTAATGGTCTTAG+TGG | - | chr3.3:86828449-86828468 | MS.gene32732:CDS | 30.0% |
| ! | ATAAAAGGAAGTGTAAATGG+TGG | - | chr3.3:86830149-86830168 | MS.gene32732:CDS | 30.0% |
| ! | GATTTTGGACACCAAATAAA+GGG | - | chr3.3:86828555-86828574 | MS.gene32732:intron | 30.0% |
| ! | GTCCTTGAAGTATATTTTCT+AGG | + | chr3.3:86829746-86829765 | None:intergenic | 30.0% |
| ! | GTTGAACCAAGATTTAAAAC+TGG | - | chr3.3:86830248-86830267 | MS.gene32732:CDS | 30.0% |
| ! | TTTTAGTCCCATGTTATGTA+AGG | + | chr3.3:86829688-86829707 | None:intergenic | 30.0% |
| !! | ATGCCTGATTTTGAAAAGTT+TGG | - | chr3.3:86828383-86828402 | MS.gene32732:CDS | 30.0% |
| !! | CCAAGAAAGTGCTTAATATA+GGG | + | chr3.3:86830200-86830219 | None:intergenic | 30.0% |
| !! | CTCAAAGGTTCTTTTGTTTA+TGG | - | chr3.3:86830050-86830069 | MS.gene32732:CDS | 30.0% |
| !! | GTTCATTGGATTTGTTGTTT+GGG | - | chr3.3:86829262-86829281 | MS.gene32732:CDS | 30.0% |
| !! | TATGGAATTTTGAAGGACTT+GGG | - | chr3.3:86830068-86830087 | MS.gene32732:CDS | 30.0% |
| !! | TCCAAGAAAGTGCTTAATAT+AGG | + | chr3.3:86830201-86830220 | None:intergenic | 30.0% |
| !! | TGTTCATTGGATTTGTTGTT+TGG | - | chr3.3:86829261-86829280 | MS.gene32732:CDS | 30.0% |
| !! | TTATGGAATTTTGAAGGACT+TGG | - | chr3.3:86830067-86830086 | MS.gene32732:CDS | 30.0% |
| AAGATTTGTGGTGGTTGTAT+GGG | - | chr3.3:86829901-86829920 | MS.gene32732:CDS | 35.0% | |
| AAGTCATATGGTAAGGCATA+AGG | + | chr3.3:86828860-86828879 | None:intergenic | 35.0% | |
| ACAACAGGAAGAAAAATGCA+TGG | - | chr3.3:86829183-86829202 | MS.gene32732:intron | 35.0% | |
| AGAGAAAGTAGTGAGTAACT+TGG | - | chr3.3:86829877-86829896 | MS.gene32732:CDS | 35.0% | |
| ATGATCTTGGGTCAATCATA+TGG | - | chr3.3:86828642-86828661 | MS.gene32732:CDS | 35.0% | |
| ATTGGGAAGAAATTGAGGAT+AGG | - | chr3.3:86828710-86828729 | MS.gene32732:CDS | 35.0% | |
| CAACAGGAAGAAAAATGCAT+GGG | - | chr3.3:86829184-86829203 | MS.gene32732:intron | 35.0% | |
| CCCTATATTAAGCACTTTCT+TGG | - | chr3.3:86830197-86830216 | MS.gene32732:CDS | 35.0% | |
| CGAATGTTCTACATACTACA+TGG | - | chr3.3:86829709-86829728 | MS.gene32732:CDS | 35.0% | |
| CTACTATTGGGAAGAAATTG+AGG | - | chr3.3:86828705-86828724 | MS.gene32732:CDS | 35.0% | |
| CTCAATTTCTTCCCAATAGT+AGG | + | chr3.3:86828707-86828726 | None:intergenic | 35.0% | |
| GATGGGAAATTCCTACTATT+GGG | - | chr3.3:86828693-86828712 | MS.gene32732:CDS | 35.0% | |
| GCAAATCGAACAAAGTCATA+TGG | + | chr3.3:86828872-86828891 | None:intergenic | 35.0% | |
| GCATGTTCATTTGTGTTCAT+TGG | - | chr3.3:86829248-86829267 | MS.gene32732:CDS | 35.0% | |
| GGATATGTACTCTATTCCAA+AGG | - | chr3.3:86828670-86828689 | MS.gene32732:CDS | 35.0% | |
| GGATTGACAGAAATTTGATG+CGG | - | chr3.3:86829061-86829080 | MS.gene32732:intron | 35.0% | |
| TAAAGGGCTGTCTAGAAATT+TGG | - | chr3.3:86828571-86828590 | MS.gene32732:intron | 35.0% | |
| TCGAACAAAGTCATATGGTA+AGG | + | chr3.3:86828867-86828886 | None:intergenic | 35.0% | |
| TCTAGAAATTTGGACACAGA+AGG | - | chr3.3:86828581-86828600 | MS.gene32732:intron | 35.0% | |
| TCTTGACAGTTGAACAACTA+AGG | - | chr3.3:86829975-86829994 | MS.gene32732:CDS | 35.0% | |
| TTTCTAGACAGCCCTTTATT+TGG | + | chr3.3:86828569-86828588 | None:intergenic | 35.0% | |
| ! | AGATTTAAAACTGGTGGCTT+TGG | - | chr3.3:86830257-86830276 | MS.gene32732:CDS | 35.0% |
| ! | ATGGTTTTCCTTCTCAACTA+TGG | - | chr3.3:86829349-86829368 | MS.gene32732:CDS | 35.0% |
| ! | GAACCAAGATTTAAAACTGG+TGG | - | chr3.3:86830251-86830270 | MS.gene32732:CDS | 35.0% |
| ! | GGATTTTGGACACCAAATAA+AGG | - | chr3.3:86828554-86828573 | MS.gene32732:intron | 35.0% |
| ! | GTGAAAAGAGAGTTGGATTT+TGG | - | chr3.3:86828540-86828559 | MS.gene32732:intron | 35.0% |
| !! | AGTGGTGATTTTGATGTTGT+TGG | - | chr3.3:86828467-86828486 | MS.gene32732:CDS | 35.0% |
| !! | GTGATTTTGATGTTGTTGGT+GGG | - | chr3.3:86828471-86828490 | MS.gene32732:CDS | 35.0% |
| !!! | AAGCCACCAGTTTTAAATCT+TGG | + | chr3.3:86830257-86830276 | None:intergenic | 35.0% |
| ACAATGCCATACACAGAATC+TGG | - | chr3.3:86829134-86829153 | MS.gene32732:intron | 40.0% | |
| ACAGAAATTTGATGCGGTAG+TGG | - | chr3.3:86829067-86829086 | MS.gene32732:intron | 40.0% | |
| AGAAATTTGATGCGGTAGTG+GGG | - | chr3.3:86829069-86829088 | MS.gene32732:intron | 40.0% | |
| AGCATAGACCATAGTTGAGA+AGG | + | chr3.3:86829360-86829379 | None:intergenic | 40.0% | |
| ATCAGATTGGCACAAGCTTA+TGG | - | chr3.3:86829330-86829349 | MS.gene32732:CDS | 40.0% | |
| CAAGATTTGTGGTGGTTGTA+TGG | - | chr3.3:86829900-86829919 | MS.gene32732:CDS | 40.0% | |
| CAGAAATTTGATGCGGTAGT+GGG | - | chr3.3:86829068-86829087 | MS.gene32732:intron | 40.0% | |
| GAGTAACTTGGCAAGATTTG+TGG | - | chr3.3:86829889-86829908 | MS.gene32732:CDS | 40.0% | |
| GCTATTGAGGAAGTTGGAAT+TGG | - | chr3.3:86828311-86828330 | MS.gene32732:CDS | 40.0% | |
| GCTTGTGTTGAATTGGTACT+AGG | + | chr3.3:86828791-86828810 | None:intergenic | 40.0% | |
| GGAATTGGAGCCACTAAATT+TGG | - | chr3.3:86828326-86828345 | MS.gene32732:CDS | 40.0% | |
| GGATGGGAAATTCCTACTAT+TGG | - | chr3.3:86828692-86828711 | MS.gene32732:CDS | 40.0% | |
| GTACTCTATTCCAAAGGGAT+GGG | - | chr3.3:86828676-86828695 | MS.gene32732:CDS | 40.0% | |
| TAACTTGGCAAGATTTGTGG+TGG | - | chr3.3:86829892-86829911 | MS.gene32732:CDS | 40.0% | |
| TGTACTCTATTCCAAAGGGA+TGG | - | chr3.3:86828675-86828694 | MS.gene32732:CDS | 40.0% | |
| TTGAGCGATCAACTCATTGT+AGG | + | chr3.3:86828921-86828940 | None:intergenic | 40.0% | |
| TTGATCGCTCAACTTTACGA+CGG | - | chr3.3:86828929-86828948 | MS.gene32732:intron | 40.0% | |
| !! | GGTGATTTTGATGTTGTTGG+TGG | - | chr3.3:86828470-86828489 | MS.gene32732:CDS | 40.0% |
| !!! | CTTTTTGAAGCCACTCACAT+GGG | - | chr3.3:86829208-86829227 | MS.gene32732:intron | 40.0% |
| ACCAATTCAACACAAGCCAC+TGG | - | chr3.3:86828794-86828813 | MS.gene32732:intron | 45.0% | |
| CACAGAATCTGGTGTGACAA+TGG | - | chr3.3:86829145-86829164 | MS.gene32732:intron | 45.0% | |
| CCATGTGAGTGGCTTCAAAA+AGG | + | chr3.3:86829210-86829229 | None:intergenic | 45.0% | |
| GATATCAATGCAGAAGCCAG+TGG | + | chr3.3:86828813-86828832 | None:intergenic | 45.0% | |
| GGAATAGAGTACATATCCCC+TGG | + | chr3.3:86828668-86828687 | None:intergenic | 45.0% | |
| GTAGGAATTTCCCATCCCTT+TGG | + | chr3.3:86828689-86828708 | None:intergenic | 45.0% | |
| GTCACACCAGATTCTGTGTA+TGG | + | chr3.3:86829143-86829162 | None:intergenic | 45.0% | |
| TGATCGCTCAACTTTACGAC+GGG | - | chr3.3:86828930-86828949 | MS.gene32732:intron | 45.0% | |
| TGGTGTACGTCTGTAATAGC+TGG | + | chr3.3:86830001-86830020 | None:intergenic | 45.0% | |
| TTGGACACAGAAGGCCTAAT+AGG | - | chr3.3:86828590-86828609 | MS.gene32732:CDS | 45.0% | |
| TTGGGTCAATCATATGGCCA+GGG | - | chr3.3:86828648-86828667 | MS.gene32732:CDS | 45.0% | |
| ! | GAAATTTGATGCGGTAGTGG+GGG | - | chr3.3:86829070-86829089 | MS.gene32732:intron | 45.0% |
| ! | GGTGATGGTGAAAAGAGAGT+TGG | - | chr3.3:86828533-86828552 | MS.gene32732:intron | 45.0% |
| ! | GGTGGTTGTATGGGTTTTTG+TGG | - | chr3.3:86829910-86829929 | MS.gene32732:CDS | 45.0% |
| ! | GTTCGATTTGCAAAGCCTGA+TGG | - | chr3.3:86828881-86828900 | MS.gene32732:intron | 45.0% |
| !! | AGATGAATGTCGGCTCTCAA+AGG | - | chr3.3:86830035-86830054 | MS.gene32732:CDS | 45.0% |
| !!! | CCTTTTTGAAGCCACTCACA+TGG | - | chr3.3:86829207-86829226 | MS.gene32732:intron | 45.0% |
| ACCCAAAGATCCCATGTGAG+TGG | + | chr3.3:86829221-86829240 | None:intergenic | 50.0% | |
| AGCCACTCACATGGGATCTT+TGG | - | chr3.3:86829216-86829235 | MS.gene32732:intron | 50.0% | |
| CTTGGGTCAATCATATGGCC+AGG | - | chr3.3:86828647-86828666 | MS.gene32732:CDS | 50.0% | |
| GATCGCTCAACTTTACGACG+GGG | - | chr3.3:86828931-86828950 | MS.gene32732:intron | 50.0% | |
| GCCACTCACATGGGATCTTT+GGG | - | chr3.3:86829217-86829236 | MS.gene32732:intron | 50.0% | |
| GGACCACTCTCTCATCAGAT+TGG | - | chr3.3:86829317-86829336 | MS.gene32732:CDS | 50.0% | |
| GTGCCAATCTGATGAGAGAG+TGG | + | chr3.3:86829323-86829342 | None:intergenic | 50.0% | |
| TGGGTCAATCATATGGCCAG+GGG | - | chr3.3:86828649-86828668 | MS.gene32732:CDS | 50.0% | |
| ! | GCCAGTGGCTTGTGTTGAAT+TGG | + | chr3.3:86828798-86828817 | None:intergenic | 50.0% |
| ! | TGCAAAGCCTGATGGTGAGA+TGG | - | chr3.3:86828889-86828908 | MS.gene32732:intron | 50.0% |
| GTTCCTGCCATCTCACCATC+AGG | + | chr3.3:86828899-86828918 | None:intergenic | 55.0% | |
| ! | AAGCCTGATGGTGAGATGGC+AGG | - | chr3.3:86828893-86828912 | MS.gene32732:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 86828308 | 86830319 | 86828308 | ID=MS.gene32732 |
| chr3.3 | mRNA | 86828308 | 86830319 | 86828308 | ID=MS.gene32732.t1;Parent=MS.gene32732 |
| chr3.3 | exon | 86829675 | 86830319 | 86829675 | ID=MS.gene32732.t1.exon1;Parent=MS.gene32732.t1 |
| chr3.3 | CDS | 86829675 | 86830319 | 86829675 | ID=cds.MS.gene32732.t1;Parent=MS.gene32732.t1 |
| chr3.3 | exon | 86829244 | 86829556 | 86829244 | ID=MS.gene32732.t1.exon2;Parent=MS.gene32732.t1 |
| chr3.3 | CDS | 86829244 | 86829556 | 86829244 | ID=cds.MS.gene32732.t1;Parent=MS.gene32732.t1 |
| chr3.3 | exon | 86828585 | 86828751 | 86828585 | ID=MS.gene32732.t1.exon3;Parent=MS.gene32732.t1 |
| chr3.3 | CDS | 86828585 | 86828751 | 86828585 | ID=cds.MS.gene32732.t1;Parent=MS.gene32732.t1 |
| chr3.3 | exon | 86828308 | 86828544 | 86828308 | ID=MS.gene32732.t1.exon4;Parent=MS.gene32732.t1 |
| chr3.3 | CDS | 86828308 | 86828544 | 86828308 | ID=cds.MS.gene32732.t1;Parent=MS.gene32732.t1 |
| Gene Sequence |
| Protein sequence |
