Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050457.t1 | XP_003600092.1 | 94.6 | 428 | 17 | 2 | 1 | 422 | 32 | 459 | 9.00E-241 | 842.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050457.t1 | Q9SZA4 | 77.3 | 427 | 89 | 3 | 1 | 422 | 34 | 457 | 6.8e-197 | 688.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050457.t1 | G7IY01 | 94.6 | 428 | 17 | 2 | 1 | 422 | 32 | 459 | 6.5e-241 | 842.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050457.t1 | MTR_3g051690 | 94.626 | 428 | 17 | 2 | 1 | 422 | 32 | 459 | 0.0 | 843 |
MS.gene050457.t1 | MTR_5g008010 | 90.398 | 427 | 32 | 4 | 1 | 422 | 32 | 454 | 0.0 | 797 |
MS.gene050457.t1 | MTR_7g106870 | 74.825 | 429 | 97 | 6 | 1 | 422 | 33 | 457 | 0.0 | 668 |
MS.gene050457.t1 | MTR_7g451830 | 67.366 | 429 | 116 | 8 | 2 | 422 | 19 | 431 | 0.0 | 566 |
MS.gene050457.t1 | MTR_7g047640 | 67.366 | 429 | 116 | 8 | 2 | 422 | 19 | 431 | 0.0 | 566 |
MS.gene050457.t1 | MTR_7g057540 | 64.884 | 430 | 125 | 8 | 1 | 422 | 15 | 426 | 0.0 | 534 |
MS.gene050457.t1 | MTR_7g055590 | 64.802 | 429 | 125 | 8 | 1 | 421 | 15 | 425 | 0.0 | 531 |
MS.gene050457.t1 | MTR_7g053100 | 62.005 | 429 | 139 | 7 | 1 | 422 | 25 | 436 | 0.0 | 518 |
MS.gene050457.t1 | MTR_7g034625 | 70.755 | 318 | 86 | 2 | 97 | 407 | 13 | 330 | 1.81e-166 | 471 |
MS.gene050457.t1 | MTR_2g100540 | 50.580 | 431 | 158 | 12 | 2 | 422 | 12 | 397 | 1.48e-127 | 374 |
MS.gene050457.t1 | MTR_2g100460 | 56.560 | 343 | 135 | 5 | 80 | 420 | 52 | 382 | 1.63e-126 | 371 |
MS.gene050457.t1 | MTR_2g060710 | 44.282 | 411 | 207 | 8 | 2 | 398 | 26 | 428 | 2.48e-119 | 355 |
MS.gene050457.t1 | MTR_3g067940 | 44.286 | 420 | 212 | 7 | 2 | 409 | 57 | 466 | 3.97e-116 | 348 |
MS.gene050457.t1 | MTR_4g102510 | 43.198 | 419 | 206 | 7 | 2 | 401 | 51 | 456 | 1.04e-110 | 334 |
MS.gene050457.t1 | MTR_4g415070 | 58.621 | 58 | 24 | 0 | 347 | 404 | 57 | 114 | 1.90e-16 | 80.1 |
MS.gene050457.t1 | MTR_2g012630 | 27.397 | 219 | 148 | 8 | 127 | 342 | 35 | 245 | 2.76e-15 | 78.6 |
MS.gene050457.t1 | MTR_1g054300 | 26.263 | 297 | 161 | 10 | 147 | 396 | 114 | 399 | 2.99e-15 | 77.8 |
MS.gene050457.t1 | MTR_1g054300 | 26.119 | 268 | 170 | 11 | 134 | 394 | 235 | 481 | 2.20e-14 | 75.1 |
MS.gene050457.t1 | MTR_2g012630 | 27.397 | 219 | 148 | 8 | 127 | 342 | 35 | 245 | 3.23e-15 | 78.6 |
MS.gene050457.t1 | MTR_6g004040 | 28.326 | 233 | 153 | 10 | 113 | 339 | 19 | 243 | 6.90e-15 | 77.4 |
MS.gene050457.t1 | MTR_5g016370 | 23.693 | 287 | 163 | 8 | 116 | 394 | 312 | 550 | 1.21e-14 | 76.3 |
MS.gene050457.t1 | MTR_5g016350 | 22.997 | 287 | 179 | 7 | 110 | 395 | 294 | 539 | 5.78e-13 | 70.9 |
MS.gene050457.t1 | MTR_5g016350 | 22.997 | 287 | 179 | 7 | 110 | 395 | 230 | 475 | 6.91e-13 | 70.5 |
MS.gene050457.t1 | MTR_4g095058 | 24.382 | 283 | 168 | 11 | 116 | 395 | 295 | 534 | 5.37e-12 | 68.2 |
MS.gene050457.t1 | MTR_4g095058 | 24.382 | 283 | 168 | 11 | 116 | 395 | 293 | 532 | 6.46e-12 | 67.8 |
MS.gene050457.t1 | MTR_3g106080 | 24.351 | 308 | 191 | 10 | 128 | 403 | 326 | 623 | 9.18e-12 | 67.4 |
MS.gene050457.t1 | MTR_7g086360 | 23.415 | 205 | 150 | 4 | 193 | 395 | 53 | 252 | 2.42e-11 | 65.1 |
MS.gene050457.t1 | MTR_1g049000 | 39.362 | 94 | 47 | 3 | 173 | 257 | 8 | 100 | 4.80e-11 | 62.0 |
MS.gene050457.t1 | MTR_4g119620 | 22.581 | 248 | 177 | 7 | 155 | 394 | 81 | 321 | 5.36e-11 | 63.9 |
MS.gene050457.t1 | MTR_5g022690 | 27.011 | 174 | 120 | 5 | 139 | 310 | 266 | 434 | 8.50e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene050457.t1 | AT4G33270 | 77.283 | 427 | 89 | 4 | 1 | 422 | 34 | 457 | 0.0 | 687 |
MS.gene050457.t1 | AT4G33260 | 77.283 | 427 | 89 | 4 | 1 | 422 | 24 | 447 | 0.0 | 668 |
MS.gene050457.t1 | AT4G33260 | 75.122 | 410 | 94 | 4 | 1 | 405 | 24 | 430 | 0.0 | 635 |
MS.gene050457.t1 | AT5G27570 | 68.531 | 429 | 120 | 6 | 1 | 422 | 30 | 450 | 0.0 | 590 |
MS.gene050457.t1 | AT5G27080 | 67.133 | 429 | 126 | 6 | 1 | 422 | 22 | 442 | 0.0 | 580 |
MS.gene050457.t1 | AT5G26900 | 66.589 | 428 | 129 | 5 | 1 | 422 | 25 | 444 | 0.0 | 572 |
MS.gene050457.t1 | AT5G27945 | 61.456 | 371 | 123 | 5 | 68 | 422 | 62 | 428 | 1.21e-156 | 449 |
MS.gene050457.t1 | AT4G22910 | 42.822 | 411 | 216 | 7 | 2 | 401 | 62 | 464 | 8.70e-113 | 339 |
MS.gene050457.t1 | AT5G13840 | 51.475 | 305 | 145 | 3 | 100 | 404 | 164 | 465 | 1.56e-110 | 333 |
MS.gene050457.t1 | AT5G13840 | 51.475 | 305 | 145 | 3 | 100 | 404 | 164 | 465 | 1.56e-110 | 333 |
MS.gene050457.t1 | AT4G11920 | 42.118 | 425 | 212 | 8 | 2 | 407 | 53 | 462 | 1.91e-110 | 333 |
MS.gene050457.t1 | AT1G11160 | 28.155 | 206 | 131 | 7 | 119 | 313 | 16 | 215 | 4.47e-16 | 81.3 |
MS.gene050457.t1 | AT1G11160 | 28.155 | 206 | 131 | 7 | 119 | 313 | 16 | 215 | 4.67e-16 | 81.3 |
MS.gene050457.t1 | AT1G11160 | 28.155 | 206 | 131 | 7 | 119 | 313 | 16 | 215 | 5.53e-16 | 80.9 |
MS.gene050457.t1 | AT5G08390 | 29.060 | 234 | 136 | 10 | 109 | 339 | 37 | 243 | 1.16e-15 | 79.7 |
MS.gene050457.t1 | AT1G11160 | 30.247 | 162 | 105 | 6 | 154 | 313 | 18 | 173 | 6.14e-15 | 77.8 |
MS.gene050457.t1 | AT1G61210 | 26.339 | 224 | 142 | 8 | 111 | 319 | 6 | 221 | 1.68e-14 | 76.3 |
MS.gene050457.t1 | AT1G61210 | 26.126 | 222 | 145 | 8 | 111 | 319 | 6 | 221 | 1.81e-14 | 76.3 |
MS.gene050457.t1 | AT1G61210 | 26.339 | 224 | 142 | 8 | 111 | 319 | 6 | 221 | 1.95e-14 | 76.3 |
MS.gene050457.t1 | AT5G52820 | 28.226 | 248 | 154 | 12 | 155 | 396 | 244 | 473 | 4.13e-14 | 74.3 |
MS.gene050457.t1 | AT5G23430 | 28.774 | 212 | 138 | 9 | 113 | 319 | 19 | 222 | 1.64e-13 | 73.2 |
MS.gene050457.t1 | AT5G23430 | 28.774 | 212 | 138 | 9 | 113 | 319 | 19 | 222 | 1.64e-13 | 73.2 |
MS.gene050457.t1 | AT5G23430 | 28.774 | 212 | 138 | 9 | 113 | 319 | 19 | 222 | 1.79e-13 | 72.8 |
MS.gene050457.t1 | AT5G25150 | 25.749 | 334 | 209 | 12 | 104 | 409 | 305 | 627 | 3.96e-13 | 71.6 |
MS.gene050457.t1 | AT5G25150 | 25.749 | 334 | 209 | 12 | 104 | 409 | 305 | 627 | 4.70e-13 | 71.6 |
MS.gene050457.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 574 | 805 | 5.98e-13 | 71.2 |
MS.gene050457.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 553 | 784 | 6.06e-13 | 71.2 |
MS.gene050457.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 555 | 786 | 6.29e-13 | 71.2 |
MS.gene050457.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 555 | 786 | 6.29e-13 | 71.2 |
MS.gene050457.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 555 | 786 | 6.29e-13 | 71.2 |
MS.gene050457.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 555 | 786 | 6.29e-13 | 71.2 |
MS.gene050457.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 555 | 786 | 6.29e-13 | 71.2 |
MS.gene050457.t1 | AT5G67320 | 25.000 | 284 | 165 | 12 | 116 | 395 | 330 | 569 | 1.94e-12 | 69.3 |
MS.gene050457.t1 | AT3G49660 | 23.600 | 250 | 177 | 8 | 151 | 394 | 71 | 312 | 3.93e-12 | 67.4 |
MS.gene050457.t1 | AT5G13480 | 31.319 | 182 | 115 | 7 | 131 | 309 | 218 | 392 | 1.02e-11 | 67.4 |
MS.gene050457.t1 | AT5G13480 | 27.391 | 230 | 148 | 10 | 155 | 377 | 114 | 331 | 1.74e-11 | 66.6 |
MS.gene050457.t1 | AT2G33340 | 26.042 | 192 | 134 | 5 | 207 | 395 | 236 | 422 | 1.11e-11 | 67.0 |
MS.gene050457.t1 | AT2G33340 | 26.042 | 192 | 134 | 5 | 207 | 395 | 236 | 422 | 1.11e-11 | 67.0 |
MS.gene050457.t1 | AT2G41500 | 25.203 | 246 | 134 | 8 | 155 | 398 | 342 | 539 | 1.16e-11 | 67.0 |
MS.gene050457.t1 | AT2G41500 | 25.203 | 246 | 134 | 8 | 155 | 398 | 342 | 539 | 1.16e-11 | 67.0 |
MS.gene050457.t1 | AT5G13480 | 31.319 | 182 | 115 | 7 | 131 | 309 | 241 | 415 | 1.17e-11 | 67.0 |
MS.gene050457.t1 | AT5G13480 | 27.391 | 230 | 148 | 10 | 155 | 377 | 137 | 354 | 1.72e-11 | 66.6 |
MS.gene050457.t1 | AT5G13480 | 31.319 | 182 | 115 | 7 | 131 | 309 | 218 | 392 | 1.22e-11 | 67.0 |
MS.gene050457.t1 | AT5G13480 | 27.391 | 230 | 148 | 10 | 155 | 377 | 114 | 331 | 2.12e-11 | 66.2 |
MS.gene050457.t1 | AT1G04510 | 25.116 | 215 | 152 | 5 | 207 | 417 | 236 | 445 | 1.34e-11 | 66.6 |
MS.gene050457.t1 | AT2G33340 | 26.042 | 192 | 134 | 5 | 207 | 395 | 236 | 422 | 1.37e-11 | 66.6 |
MS.gene050457.t1 | AT1G04510 | 25.116 | 215 | 152 | 5 | 207 | 417 | 236 | 445 | 1.55e-11 | 66.6 |
MS.gene050457.t1 | AT5G13480 | 31.319 | 182 | 115 | 7 | 131 | 309 | 230 | 404 | 1.57e-11 | 66.6 |
MS.gene050457.t1 | AT5G13480 | 27.391 | 230 | 148 | 10 | 155 | 377 | 126 | 343 | 2.41e-11 | 66.2 |
MS.gene050457.t1 | AT4G02730 | 26.852 | 216 | 145 | 9 | 185 | 395 | 34 | 241 | 3.89e-11 | 64.3 |
MS.gene050457.t1 | AT5G56130 | 23.786 | 206 | 113 | 5 | 232 | 395 | 16 | 219 | 7.10e-11 | 63.5 |
Find 125 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGATGAAACCTTGAGGTTT+TGG | 0.193519 | 3.2:-44256059 | MS.gene050457:CDS |
TGACTATTACCTCAATTTAC+TGG | 0.257532 | 3.2:-44257000 | MS.gene050457:CDS |
GTTGCCACTGTCCAACCATC+TGG | 0.273358 | 3.2:+44256090 | None:intergenic |
AACGGCTCAGCTCTTGCTTT+TGG | 0.277205 | 3.2:+44255997 | None:intergenic |
TTACCTCAATTTACTGGATT+GGG | 0.283267 | 3.2:-44256994 | MS.gene050457:CDS |
AATGTTCTTGCAATTGGATT+AGG | 0.295419 | 3.2:-44256963 | MS.gene050457:CDS |
CTCCTTCCAGAGAAGCTTAC+AGG | 0.301895 | 3.2:-44257675 | MS.gene050457:CDS |
AGCGCCAATGTTCTTGCAAT+TGG | 0.327966 | 3.2:-44256969 | MS.gene050457:CDS |
GTTCTTGAAAGCTAGAATTC+TGG | 0.331154 | 3.2:+44257618 | None:intergenic |
GCAGACTTCTGAGAGGATAT+TGG | 0.341248 | 3.2:-44257042 | MS.gene050457:intron |
GGATTGAAATGGTCGGCTTC+TGG | 0.343844 | 3.2:-44256498 | MS.gene050457:CDS |
ATGATAATCAACTTTACATC+TGG | 0.350065 | 3.2:-44256452 | MS.gene050457:CDS |
GCGATGAAACCATCAAGTTT+TGG | 0.364930 | 3.2:-44256314 | MS.gene050457:CDS |
ATTACCTCAATTTACTGGAT+TGG | 0.371678 | 3.2:-44256995 | MS.gene050457:CDS |
TAGCTTCCTGTAAGCTTCTC+TGG | 0.375997 | 3.2:+44257669 | None:intergenic |
TCTCATTCTTGTTCCACAAC+AGG | 0.376647 | 3.2:+44256235 | None:intergenic |
GCTCCTGATGGCCGTCATAT+TGG | 0.389395 | 3.2:-44256846 | MS.gene050457:CDS |
ATTTCAATCCGCAAACTTCT+CGG | 0.394694 | 3.2:+44256511 | None:intergenic |
AATAATTCGCCGGGGCTTGA+TGG | 0.396021 | 3.2:+44257522 | None:intergenic |
CCCTATCACATCTGTAAGTT+GGG | 0.396604 | 3.2:-44256868 | MS.gene050457:CDS |
TCTGCCATCTTCACCATTGA+AGG | 0.397901 | 3.2:+44256156 | None:intergenic |
CTCAGTTGACACTGGGTCTC+AGG | 0.408962 | 3.2:-44256265 | MS.gene050457:CDS |
TAGGAAACACATTGTATTTG+TGG | 0.412235 | 3.2:-44256944 | MS.gene050457:CDS |
CAAGGGAATTTACTAGCTAC+TGG | 0.417964 | 3.2:-44256348 | MS.gene050457:CDS |
GCCCTATCACATCTGTAAGT+TGG | 0.420766 | 3.2:-44256869 | MS.gene050457:CDS |
GAGAAGTTTGCGGATTGAAA+TGG | 0.425267 | 3.2:-44256509 | MS.gene050457:CDS |
CTCAGGTATGTTCCCTGTTG+TGG | 0.426699 | 3.2:-44256248 | MS.gene050457:CDS |
TAATAGTCATCCACAATGTC+TGG | 0.428065 | 3.2:+44257014 | None:intergenic |
CTTGCTTGGTGTCCTTTCCA+AGG | 0.428743 | 3.2:-44256366 | MS.gene050457:CDS |
GTGGGTATTCCAAAACTTGA+TGG | 0.428833 | 3.2:+44256305 | None:intergenic |
TAGGCAGCGAGTAGGGTCTT+TGG | 0.428851 | 3.2:-44256637 | MS.gene050457:CDS |
CAGAAGCTCTAAACATGAAC+AGG | 0.436496 | 3.2:-44257642 | MS.gene050457:CDS |
GTCGGCTTCTGGTCTACAAT+TGG | 0.444050 | 3.2:-44256487 | MS.gene050457:CDS |
AAATCCATAGCTGATCTATT+CGG | 0.447023 | 3.2:+44257766 | None:intergenic |
GCCCAACTTACAGATGTGAT+AGG | 0.450468 | 3.2:+44256867 | None:intergenic |
AGGAAACACATTGTATTTGT+GGG | 0.452538 | 3.2:-44256943 | MS.gene050457:CDS |
CTTCAACAAGGTGGCTTCAC+AGG | 0.460645 | 3.2:-44256419 | MS.gene050457:CDS |
TTGCTTGGTGTCCTTTCCAA+GGG | 0.471233 | 3.2:-44256365 | MS.gene050457:CDS |
CACAGAATCAGATAACACTT+TGG | 0.480456 | 3.2:-44256185 | MS.gene050457:CDS |
TCATGAGAGAAGAAATCAAC+TGG | 0.484334 | 3.2:+44257580 | None:intergenic |
ACAACTCTGAAGTGCAGCTA+TGG | 0.484474 | 3.2:-44256812 | MS.gene050457:CDS |
GGATACAGCTTCAGATAGAC+AGG | 0.484963 | 3.2:-44256790 | MS.gene050457:intron |
ATGCCAATATGACGGCCATC+AGG | 0.485428 | 3.2:+44256843 | None:intergenic |
CTAGCTACTGGCGGAGGCAG+TGG | 0.487153 | 3.2:-44256336 | MS.gene050457:CDS |
CACTTCAAGAGTTCTTCATA+TGG | 0.487383 | 3.2:-44256121 | MS.gene050457:CDS |
TTGATTATCATTCCCTCCAC+TGG | 0.491219 | 3.2:+44256464 | None:intergenic |
TTGCCACTGTCCAACCATCT+GGG | 0.492660 | 3.2:+44256091 | None:intergenic |
TGGAAGGAGAGCACACTTGT+GGG | 0.493184 | 3.2:+44257689 | None:intergenic |
ACTTTGGAAATATCCTTCAA+TGG | 0.495344 | 3.2:-44256169 | MS.gene050457:CDS |
GATGGCCGTCATATTGGCAT+TGG | 0.495923 | 3.2:-44256840 | MS.gene050457:CDS |
ATATCCTTCAATGGTGAAGA+TGG | 0.498891 | 3.2:-44256160 | MS.gene050457:CDS |
CGCACTACATGGTGACTGAA+GGG | 0.507766 | 3.2:-44257735 | MS.gene050457:CDS |
CTGGAAGGAGAGCACACTTG+TGG | 0.508404 | 3.2:+44257688 | None:intergenic |
AAGAAATCAACTGGCGGCGT+AGG | 0.510142 | 3.2:+44257589 | None:intergenic |
ATGCGGCTCAAATGTGAAAA+CGG | 0.515552 | 3.2:+44255979 | None:intergenic |
GGGCATGACCGAGAAGTTTG+CGG | 0.518071 | 3.2:-44256519 | MS.gene050457:CDS |
AACAGTAACAAGTTCTGAAG+TGG | 0.523430 | 3.2:+44256905 | None:intergenic |
CTGCAGTTGAGAACTTTGAA+AGG | 0.529944 | 3.2:-44256666 | MS.gene050457:intron |
GAACTTTGAAAGGTGGGCAT+AGG | 0.530523 | 3.2:-44256656 | MS.gene050457:CDS |
AATAACCACATACTCACAAC+CGG | 0.531617 | 3.2:-44256609 | MS.gene050457:CDS |
TCCCTCCGGTTGTGAGTATG+TGG | 0.533027 | 3.2:+44256604 | None:intergenic |
GCCCCGGCGAATTATTCCTC+AGG | 0.533857 | 3.2:-44257515 | MS.gene050457:intron |
CTCATTCTTGTTCCACAACA+GGG | 0.537252 | 3.2:+44256236 | None:intergenic |
CTGCAGTAAAAGCTCTTGCT+TGG | 0.539760 | 3.2:-44256380 | MS.gene050457:CDS |
ACACCTGAGGAATAATTCGC+CGG | 0.542147 | 3.2:+44257512 | None:intergenic |
TGATAATCAACTTTACATCT+GGG | 0.543770 | 3.2:-44256451 | MS.gene050457:CDS |
TTTCGATTATGCGCACTACA+TGG | 0.544215 | 3.2:-44257746 | MS.gene050457:CDS |
TGCTTGAACTCAGTTGACAC+TGG | 0.544299 | 3.2:-44256273 | MS.gene050457:CDS |
GACAGTGGCAACAGCTGCAG+CGG | 0.545471 | 3.2:-44256079 | MS.gene050457:CDS |
AGGGAGCTACTCAGCTCTCA+TGG | 0.545560 | 3.2:-44256213 | MS.gene050457:CDS |
TATTTGTGGGATGCATCAAA+CGG | 0.551368 | 3.2:-44256930 | MS.gene050457:CDS |
AAATCAACTGGCGGCGTAGG+TGG | 0.551699 | 3.2:+44257592 | None:intergenic |
CAACTCTGAAGTGCAGCTAT+GGG | 0.552386 | 3.2:-44256811 | MS.gene050457:CDS |
TAATCCAATTGCAAGAACAT+TGG | 0.554610 | 3.2:+44256965 | None:intergenic |
CTCACAACCGGAGGGATGGA+TGG | 0.555824 | 3.2:-44256597 | MS.gene050457:CDS |
CATATGGCGCAGAGCCCAGA+TGG | 0.555918 | 3.2:-44256105 | MS.gene050457:CDS |
GTGGGCATAGGCAGCGAGTA+GGG | 0.557831 | 3.2:-44256644 | MS.gene050457:CDS |
CACCTGAGGAATAATTCGCC+GGG | 0.559324 | 3.2:+44257513 | None:intergenic |
AGTTGAGAACTTTGAAAGGT+GGG | 0.559397 | 3.2:-44256662 | MS.gene050457:CDS |
TGGCGCAGAGCCCAGATGGT+TGG | 0.562028 | 3.2:-44256101 | MS.gene050457:CDS |
TACCTCAATTTACTGGATTG+GGG | 0.562441 | 3.2:-44256993 | MS.gene050457:CDS |
GCTAGTAAATTCCCTTGGAA+AGG | 0.568517 | 3.2:+44256354 | None:intergenic |
GTCTACAATTGGCCAGTGGA+GGG | 0.570881 | 3.2:-44256476 | MS.gene050457:CDS |
GTGAAGATGGCAGAACTCAA+TGG | 0.571074 | 3.2:-44256147 | MS.gene050457:CDS |
GCGCACTACATGGTGACTGA+AGG | 0.571364 | 3.2:-44257736 | MS.gene050457:CDS |
CATACTCACAACCGGAGGGA+TGG | 0.571933 | 3.2:-44256601 | MS.gene050457:CDS |
CAGTTGAGAACTTTGAAAGG+TGG | 0.572101 | 3.2:-44256663 | MS.gene050457:CDS |
GGTCTACAATTGGCCAGTGG+AGG | 0.575013 | 3.2:-44256477 | MS.gene050457:CDS |
GTTACTGTTGATGATGAAGA+TGG | 0.576596 | 3.2:-44256891 | MS.gene050457:CDS |
TTCCCCAATCCAGTAAATTG+AGG | 0.576674 | 3.2:+44256991 | None:intergenic |
TTCCTGTAAGCTTCTCTGGA+AGG | 0.579286 | 3.2:+44257673 | None:intergenic |
ACTGAAGGGGCTAAAGCTAA+AGG | 0.581037 | 3.2:-44257721 | MS.gene050457:CDS |
AGGGGCTAAAGCTAAAGGTA+AGG | 0.581254 | 3.2:-44257716 | MS.gene050457:CDS |
TCTGTAAGTTGGGCTCCTGA+TGG | 0.584539 | 3.2:-44256858 | MS.gene050457:CDS |
CCCAACTTACAGATGTGATA+GGG | 0.585245 | 3.2:+44256868 | None:intergenic |
AATTCTACCATCCATCCCTC+CGG | 0.585408 | 3.2:+44256590 | None:intergenic |
AAAAGCATTCCAAAACCTCA+AGG | 0.587395 | 3.2:+44256050 | None:intergenic |
GGTGGGCATAGGCAGCGAGT+AGG | 0.596714 | 3.2:-44256645 | MS.gene050457:CDS |
CATACCGAATAGATCAGCTA+TGG | 0.601151 | 3.2:-44257770 | MS.gene050457:CDS |
AGCGAGTAGGGTCTTTGGCA+TGG | 0.601597 | 3.2:-44256632 | MS.gene050457:CDS |
ATTGGATGCTCCAGACATTG+TGG | 0.612151 | 3.2:-44257024 | MS.gene050457:CDS |
AAGATAAAACCATCAAGCCC+CGG | 0.617625 | 3.2:-44257531 | MS.gene050457:CDS |
TGTTGTGGAACAAGAATGAG+AGG | 0.618210 | 3.2:-44256233 | MS.gene050457:CDS |
GCTTGAACTCAGTTGACACT+GGG | 0.627877 | 3.2:-44256272 | MS.gene050457:CDS |
CAGTAGCTAGTAAATTCCCT+TGG | 0.629888 | 3.2:+44256349 | None:intergenic |
AATTTACTAGCTACTGGCGG+AGG | 0.633586 | 3.2:-44256342 | MS.gene050457:CDS |
TCAAGCCAATGCCAATATGA+CGG | 0.636859 | 3.2:+44256835 | None:intergenic |
GAGCCCAGATGGTTGGACAG+TGG | 0.641101 | 3.2:-44256094 | MS.gene050457:CDS |
TCTGGTCTACAATTGGCCAG+TGG | 0.642557 | 3.2:-44256480 | MS.gene050457:CDS |
ACCACATACTCACAACCGGA+GGG | 0.650856 | 3.2:-44256605 | MS.gene050457:CDS |
GCACTACATGGTGACTGAAG+GGG | 0.656801 | 3.2:-44257734 | MS.gene050457:CDS |
AGTTTGCGGATTGAAATGGT+CGG | 0.668119 | 3.2:-44256505 | MS.gene050457:CDS |
GTTCAAGCATGCACCTGTGT+GGG | 0.668846 | 3.2:+44256287 | None:intergenic |
CTGCAGCGGATGAAACCTTG+AGG | 0.678181 | 3.2:-44256065 | MS.gene050457:CDS |
AGTTCAAGCATGCACCTGTG+TGG | 0.678713 | 3.2:+44256286 | None:intergenic |
ACATTGTTGAAACATACAGA+GGG | 0.688874 | 3.2:-44256539 | MS.gene050457:CDS |
AACCACATACTCACAACCGG+AGG | 0.695066 | 3.2:-44256606 | MS.gene050457:CDS |
TGAGAGAAGAAATCAACTGG+CGG | 0.700989 | 3.2:+44257583 | None:intergenic |
CACATTGTTGAAACATACAG+AGG | 0.702329 | 3.2:-44256540 | MS.gene050457:CDS |
GGGATAGAAGTACTTCAACA+AGG | 0.702662 | 3.2:-44256431 | MS.gene050457:CDS |
GGGAATTTACTAGCTACTGG+CGG | 0.715639 | 3.2:-44256345 | MS.gene050457:CDS |
ATGTTACTACTTATCGAATG+CGG | 0.717524 | 3.2:+44255962 | None:intergenic |
GTTGTGGAACAAGAATGAGA+GGG | 0.727155 | 3.2:-44256232 | MS.gene050457:CDS |
ACCTGAGGAATAATTCGCCG+GGG | 0.733838 | 3.2:+44257514 | None:intergenic |
ATAGAAGTACTTCAACAAGG+TGG | 0.753913 | 3.2:-44256428 | MS.gene050457:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATTAGAAAACTAGTAGT+AGG | + | chr3.2:44257052-44257071 | None:intergenic | 20.0% |
!!! | CACAAAATTGCAAAATATTT+TGG | + | chr3.2:44256668-44256687 | None:intergenic | 20.0% |
!!! | GATTTAAGAATTTTGAACTT+TGG | - | chr3.2:44256496-44256515 | MS.gene050457:CDS | 20.0% |
!!! | TGTTTTCTTAATCGTTTTTA+TGG | - | chr3.2:44256419-44256438 | MS.gene050457:CDS | 20.0% |
! | ATGATAATCAACTTTACATC+TGG | - | chr3.2:44257301-44257320 | MS.gene050457:intron | 25.0% |
! | TGATAATCAACTTTACATCT+GGG | - | chr3.2:44257302-44257321 | MS.gene050457:intron | 25.0% |
!! | CACAAAATTGCAAAATCTTT+TGG | + | chr3.2:44256561-44256580 | None:intergenic | 25.0% |
!! | GATTTGAGAATTTTGAACTT+CGG | - | chr3.2:44256603-44256622 | MS.gene050457:CDS | 25.0% |
!!! | ATCAGTTTTTGAAAATCAAG+TGG | - | chr3.2:44256388-44256407 | MS.gene050457:CDS | 25.0% |
!!! | TCAGTTTTTGAAAATCAAGT+GGG | - | chr3.2:44256389-44256408 | MS.gene050457:CDS | 25.0% |
!!! | TTTTGTGCTAATTGATTTGT+TGG | - | chr3.2:44256574-44256593 | MS.gene050457:CDS | 25.0% |
AAATCCATAGCTGATCTATT+CGG | + | chr3.2:44255990-44256009 | None:intergenic | 30.0% | |
AATGTTCTTGCAATTGGATT+AGG | - | chr3.2:44256790-44256809 | MS.gene050457:intron | 30.0% | |
ACATTGTTGAAACATACAGA+GGG | - | chr3.2:44257214-44257233 | MS.gene050457:intron | 30.0% | |
AGGAAACACATTGTATTTGT+GGG | - | chr3.2:44256810-44256829 | MS.gene050457:CDS | 30.0% | |
ATAACGATGTATCGTTTGAA+GGG | + | chr3.2:44257009-44257028 | None:intergenic | 30.0% | |
ATTACCTCAATTTACTGGAT+TGG | - | chr3.2:44256758-44256777 | MS.gene050457:intron | 30.0% | |
TAATCCAATTGCAAGAACAT+TGG | + | chr3.2:44256791-44256810 | None:intergenic | 30.0% | |
TAGGAAACACATTGTATTTG+TGG | - | chr3.2:44256809-44256828 | MS.gene050457:CDS | 30.0% | |
TGACTATTACCTCAATTTAC+TGG | - | chr3.2:44256753-44256772 | MS.gene050457:intron | 30.0% | |
TTACCTCAATTTACTGGATT+GGG | - | chr3.2:44256759-44256778 | MS.gene050457:intron | 30.0% | |
! | ACTTTGGAAATATCCTTCAA+TGG | - | chr3.2:44257584-44257603 | MS.gene050457:CDS | 30.0% |
!! | AGACAGGTTTTATACTTATC+TGG | - | chr3.2:44256979-44256998 | MS.gene050457:CDS | 30.0% |
!! | TCTTATCTGAAAGTGTTGAA+TGG | - | chr3.2:44256636-44256655 | MS.gene050457:CDS | 30.0% |
!! | TCTTGTGCTAATTGATTTGT+TGG | - | chr3.2:44256467-44256486 | MS.gene050457:CDS | 30.0% |
AATAACCACATACTCACAAC+CGG | - | chr3.2:44257144-44257163 | MS.gene050457:intron | 35.0% | |
ATATCCTTCAATGGTGAAGA+TGG | - | chr3.2:44257593-44257612 | MS.gene050457:CDS | 35.0% | |
ATTTCAATCCGCAAACTTCT+CGG | + | chr3.2:44257245-44257264 | None:intergenic | 35.0% | |
CACAGAATCAGATAACACTT+TGG | - | chr3.2:44257568-44257587 | MS.gene050457:CDS | 35.0% | |
CACATTGTTGAAACATACAG+AGG | - | chr3.2:44257213-44257232 | MS.gene050457:intron | 35.0% | |
CACTTCAAGAGTTCTTCATA+TGG | - | chr3.2:44257632-44257651 | MS.gene050457:CDS | 35.0% | |
CATAACGATGTATCGTTTGA+AGG | + | chr3.2:44257010-44257029 | None:intergenic | 35.0% | |
GTTCTTGAAAGCTAGAATTC+TGG | + | chr3.2:44256138-44256157 | None:intergenic | 35.0% | |
TAATAGTCATCCACAATGTC+TGG | + | chr3.2:44256742-44256761 | None:intergenic | 35.0% | |
TACCTCAATTTACTGGATTG+GGG | - | chr3.2:44256760-44256779 | MS.gene050457:intron | 35.0% | |
TATTTGTGGGATGCATCAAA+CGG | - | chr3.2:44256823-44256842 | MS.gene050457:CDS | 35.0% | |
TCATGAGAGAAGAAATCAAC+TGG | + | chr3.2:44256176-44256195 | None:intergenic | 35.0% | |
! | AGTTGAGAACTTTGAAAGGT+GGG | - | chr3.2:44257091-44257110 | MS.gene050457:intron | 35.0% |
! | TGCATGAACTCTAGTTCAAA+CGG | - | chr3.2:44256335-44256354 | MS.gene050457:CDS | 35.0% |
!! | AAAAGCATTCCAAAACCTCA+AGG | + | chr3.2:44257706-44257725 | None:intergenic | 35.0% |
!! | AACAGTAACAAGTTCTGAAG+TGG | + | chr3.2:44256851-44256870 | None:intergenic | 35.0% |
!! | ATAGAAGTACTTCAACAAGG+TGG | - | chr3.2:44257325-44257344 | MS.gene050457:intron | 35.0% |
!! | GTTACTGTTGATGATGAAGA+TGG | - | chr3.2:44256862-44256881 | MS.gene050457:CDS | 35.0% |
!!! | TTGAGGTTTTGGAATGCTTT+TGG | - | chr3.2:44257705-44257724 | MS.gene050457:CDS | 35.0% |
AAGATAAAACCATCAAGCCC+CGG | - | chr3.2:44256222-44256241 | MS.gene050457:CDS | 40.0% | |
ATGCGGCTCAAATGTGAAAA+CGG | + | chr3.2:44257777-44257796 | None:intergenic | 40.0% | |
CAAGGGAATTTACTAGCTAC+TGG | - | chr3.2:44257405-44257424 | MS.gene050457:intron | 40.0% | |
CAGTAGCTAGTAAATTCCCT+TGG | + | chr3.2:44257407-44257426 | None:intergenic | 40.0% | |
CATACCGAATAGATCAGCTA+TGG | - | chr3.2:44255983-44256002 | MS.gene050457:CDS | 40.0% | |
CCCAACTTACAGATGTGATA+GGG | + | chr3.2:44256888-44256907 | None:intergenic | 40.0% | |
CCCTATCACATCTGTAAGTT+GGG | - | chr3.2:44256885-44256904 | MS.gene050457:CDS | 40.0% | |
CTAGTTCAAACGGCAAAAGT+CGG | - | chr3.2:44256345-44256364 | MS.gene050457:CDS | 40.0% | |
CTCAACTGCAGAAACATAAC+AGG | + | chr3.2:44257078-44257097 | None:intergenic | 40.0% | |
CTCATTCTTGTTCCACAACA+GGG | + | chr3.2:44257520-44257539 | None:intergenic | 40.0% | |
CTGCAGTTGAGAACTTTGAA+AGG | - | chr3.2:44257087-44257106 | MS.gene050457:intron | 40.0% | |
GCTAGTAAATTCCCTTGGAA+AGG | + | chr3.2:44257402-44257421 | None:intergenic | 40.0% | |
GTGGGTATTCCAAAACTTGA+TGG | + | chr3.2:44257451-44257470 | None:intergenic | 40.0% | |
GTTGTGGAACAAGAATGAGA+GGG | - | chr3.2:44257521-44257540 | MS.gene050457:CDS | 40.0% | |
TCAAGCCAATGCCAATATGA+CGG | + | chr3.2:44256921-44256940 | None:intergenic | 40.0% | |
TCTCATTCTTGTTCCACAAC+AGG | + | chr3.2:44257521-44257540 | None:intergenic | 40.0% | |
TGAGAGAAGAAATCAACTGG+CGG | + | chr3.2:44256173-44256192 | None:intergenic | 40.0% | |
TGTTGTGGAACAAGAATGAG+AGG | - | chr3.2:44257520-44257539 | MS.gene050457:CDS | 40.0% | |
TTCCCCAATCCAGTAAATTG+AGG | + | chr3.2:44256765-44256784 | None:intergenic | 40.0% | |
TTGATTATCATTCCCTCCAC+TGG | + | chr3.2:44257292-44257311 | None:intergenic | 40.0% | |
TTTCGATTATGCGCACTACA+TGG | - | chr3.2:44256007-44256026 | MS.gene050457:CDS | 40.0% | |
! | AGTTTGCGGATTGAAATGGT+CGG | - | chr3.2:44257248-44257267 | MS.gene050457:intron | 40.0% |
! | CAGTTGAGAACTTTGAAAGG+TGG | - | chr3.2:44257090-44257109 | MS.gene050457:intron | 40.0% |
! | GAGAAGTTTGCGGATTGAAA+TGG | - | chr3.2:44257244-44257263 | MS.gene050457:intron | 40.0% |
! | GCGATGAAACCATCAAGTTT+TGG | - | chr3.2:44257439-44257458 | MS.gene050457:intron | 40.0% |
!! | CAGAAGCTCTAAACATGAAC+AGG | - | chr3.2:44256111-44256130 | MS.gene050457:CDS | 40.0% |
!! | GGGATAGAAGTACTTCAACA+AGG | - | chr3.2:44257322-44257341 | MS.gene050457:intron | 40.0% |
!! | TTGTTTTGCAGACTTCTGAG+AGG | - | chr3.2:44256704-44256723 | MS.gene050457:intron | 40.0% |
!!! | AAGTTTTGGAATACCCACAC+AGG | - | chr3.2:44257453-44257472 | MS.gene050457:intron | 40.0% |
AATTCTACCATCCATCCCTC+CGG | + | chr3.2:44257166-44257185 | None:intergenic | 45.0% | |
AATTTACTAGCTACTGGCGG+AGG | - | chr3.2:44257411-44257430 | MS.gene050457:intron | 45.0% | |
ACACCTGAGGAATAATTCGC+CGG | + | chr3.2:44256244-44256263 | None:intergenic | 45.0% | |
ACTGAAGGGGCTAAAGCTAA+AGG | - | chr3.2:44256032-44256051 | MS.gene050457:CDS | 45.0% | |
AGCGCCAATGTTCTTGCAAT+TGG | - | chr3.2:44256784-44256803 | MS.gene050457:intron | 45.0% | |
AGGGGCTAAAGCTAAAGGTA+AGG | - | chr3.2:44256037-44256056 | MS.gene050457:CDS | 45.0% | |
ATTGGATGCTCCAGACATTG+TGG | - | chr3.2:44256729-44256748 | MS.gene050457:intron | 45.0% | |
CTGCAGTAAAAGCTCTTGCT+TGG | - | chr3.2:44257373-44257392 | MS.gene050457:intron | 45.0% | |
GCCCAACTTACAGATGTGAT+AGG | + | chr3.2:44256889-44256908 | None:intergenic | 45.0% | |
GCCCTATCACATCTGTAAGT+TGG | - | chr3.2:44256884-44256903 | MS.gene050457:CDS | 45.0% | |
GCTTGAACTCAGTTGACACT+GGG | - | chr3.2:44257481-44257500 | MS.gene050457:intron | 45.0% | |
GGATACAGCTTCAGATAGAC+AGG | - | chr3.2:44256963-44256982 | MS.gene050457:CDS | 45.0% | |
GGGAATTTACTAGCTACTGG+CGG | - | chr3.2:44257408-44257427 | MS.gene050457:intron | 45.0% | |
GTGAAGATGGCAGAACTCAA+TGG | - | chr3.2:44257606-44257625 | MS.gene050457:CDS | 45.0% | |
TAGCTTCCTGTAAGCTTCTC+TGG | + | chr3.2:44256087-44256106 | None:intergenic | 45.0% | |
TCTGCCATCTTCACCATTGA+AGG | + | chr3.2:44257600-44257619 | None:intergenic | 45.0% | |
TGCTTGAACTCAGTTGACAC+TGG | - | chr3.2:44257480-44257499 | MS.gene050457:intron | 45.0% | |
TTCCTGTAAGCTTCTCTGGA+AGG | + | chr3.2:44256083-44256102 | None:intergenic | 45.0% | |
! | CGGATGAAACCTTGAGGTTT+TGG | - | chr3.2:44257694-44257713 | MS.gene050457:CDS | 45.0% |
! | GAACTTTGAAAGGTGGGCAT+AGG | - | chr3.2:44257097-44257116 | MS.gene050457:intron | 45.0% |
! | GCAGACTTCTGAGAGGATAT+TGG | - | chr3.2:44256711-44256730 | MS.gene050457:intron | 45.0% |
!! | ACAACTCTGAAGTGCAGCTA+TGG | - | chr3.2:44256941-44256960 | MS.gene050457:CDS | 45.0% |
!! | CAACTCTGAAGTGCAGCTAT+GGG | - | chr3.2:44256942-44256961 | MS.gene050457:CDS | 45.0% |
!! | GCAGCTTTTGTTGCTACTTC+TGG | + | chr3.2:44257735-44257754 | None:intergenic | 45.0% |
!! | TTGCTTGGTGTCCTTTCCAA+GGG | - | chr3.2:44257388-44257407 | MS.gene050457:intron | 45.0% |
!!! | ATATTTTATCATTATTATTT+TGG | - | chr3.2:44256311-44256330 | MS.gene050457:CDS | 5.0% |
AACCACATACTCACAACCGG+AGG | - | chr3.2:44257147-44257166 | MS.gene050457:intron | 50.0% | |
AAGAAATCAACTGGCGGCGT+AGG | + | chr3.2:44256167-44256186 | None:intergenic | 50.0% | |
AATAATTCGCCGGGGCTTGA+TGG | + | chr3.2:44256234-44256253 | None:intergenic | 50.0% | |
ACCACATACTCACAACCGGA+GGG | - | chr3.2:44257148-44257167 | MS.gene050457:intron | 50.0% | |
ACCTGAGGAATAATTCGCCG+GGG | + | chr3.2:44256242-44256261 | None:intergenic | 50.0% | |
AGTTCAAGCATGCACCTGTG+TGG | + | chr3.2:44257470-44257489 | None:intergenic | 50.0% | |
ATGCCAATATGACGGCCATC+AGG | + | chr3.2:44256913-44256932 | None:intergenic | 50.0% | |
CACCTGAGGAATAATTCGCC+GGG | + | chr3.2:44256243-44256262 | None:intergenic | 50.0% | |
CGCACTACATGGTGACTGAA+GGG | - | chr3.2:44256018-44256037 | MS.gene050457:CDS | 50.0% | |
CTCAGGTATGTTCCCTGTTG+TGG | - | chr3.2:44257505-44257524 | MS.gene050457:intron | 50.0% | |
CTCCTTCCAGAGAAGCTTAC+AGG | - | chr3.2:44256078-44256097 | MS.gene050457:CDS | 50.0% | |
CTTCAACAAGGTGGCTTCAC+AGG | - | chr3.2:44257334-44257353 | MS.gene050457:intron | 50.0% | |
GATGGCCGTCATATTGGCAT+TGG | - | chr3.2:44256913-44256932 | MS.gene050457:CDS | 50.0% | |
GCACTACATGGTGACTGAAG+GGG | - | chr3.2:44256019-44256038 | MS.gene050457:CDS | 50.0% | |
GTCTACAATTGGCCAGTGGA+GGG | - | chr3.2:44257277-44257296 | MS.gene050457:intron | 50.0% | |
GTTCAAGCATGCACCTGTGT+GGG | + | chr3.2:44257469-44257488 | None:intergenic | 50.0% | |
TCTGGTCTACAATTGGCCAG+TGG | - | chr3.2:44257273-44257292 | MS.gene050457:intron | 50.0% | |
TTGCCACTGTCCAACCATCT+GGG | + | chr3.2:44257665-44257684 | None:intergenic | 50.0% | |
! | AACGGCTCAGCTCTTGCTTT+TGG | + | chr3.2:44257759-44257778 | None:intergenic | 50.0% |
! | GGATTGAAATGGTCGGCTTC+TGG | - | chr3.2:44257255-44257274 | MS.gene050457:intron | 50.0% |
! | GTCGGCTTCTGGTCTACAAT+TGG | - | chr3.2:44257266-44257285 | MS.gene050457:intron | 50.0% |
! | TCTGTAAGTTGGGCTCCTGA+TGG | - | chr3.2:44256895-44256914 | MS.gene050457:CDS | 50.0% |
! | TGGAAGGAGAGCACACTTGT+GGG | + | chr3.2:44256067-44256086 | None:intergenic | 50.0% |
!! | CTTGCTTGGTGTCCTTTCCA+AGG | - | chr3.2:44257387-44257406 | MS.gene050457:intron | 50.0% |
AAATCAACTGGCGGCGTAGG+TGG | + | chr3.2:44256164-44256183 | None:intergenic | 55.0% | |
AGCGAGTAGGGTCTTTGGCA+TGG | - | chr3.2:44257121-44257140 | MS.gene050457:intron | 55.0% | |
AGGGAGCTACTCAGCTCTCA+TGG | - | chr3.2:44257540-44257559 | MS.gene050457:CDS | 55.0% | |
CACACACACACACACACCTG+AGG | + | chr3.2:44256257-44256276 | None:intergenic | 55.0% | |
CATACTCACAACCGGAGGGA+TGG | - | chr3.2:44257152-44257171 | MS.gene050457:intron | 55.0% | |
CTCAGTTGACACTGGGTCTC+AGG | - | chr3.2:44257488-44257507 | MS.gene050457:intron | 55.0% | |
CTGCAGCGGATGAAACCTTG+AGG | - | chr3.2:44257688-44257707 | MS.gene050457:CDS | 55.0% | |
GCGCACTACATGGTGACTGA+AGG | - | chr3.2:44256017-44256036 | MS.gene050457:CDS | 55.0% | |
GCTCCTGATGGCCGTCATAT+TGG | - | chr3.2:44256907-44256926 | MS.gene050457:CDS | 55.0% | |
GGGCATGACCGAGAAGTTTG+CGG | - | chr3.2:44257234-44257253 | MS.gene050457:intron | 55.0% | |
GGTCTACAATTGGCCAGTGG+AGG | - | chr3.2:44257276-44257295 | MS.gene050457:intron | 55.0% | |
GTTGCCACTGTCCAACCATC+TGG | + | chr3.2:44257666-44257685 | None:intergenic | 55.0% | |
TAGGCAGCGAGTAGGGTCTT+TGG | - | chr3.2:44257116-44257135 | MS.gene050457:intron | 55.0% | |
TCCCTCCGGTTGTGAGTATG+TGG | + | chr3.2:44257152-44257171 | None:intergenic | 55.0% | |
! | CTGGAAGGAGAGCACACTTG+TGG | + | chr3.2:44256068-44256087 | None:intergenic | 55.0% |
CATATGGCGCAGAGCCCAGA+TGG | - | chr3.2:44257648-44257667 | MS.gene050457:CDS | 60.0% | |
CTCACAACCGGAGGGATGGA+TGG | - | chr3.2:44257156-44257175 | MS.gene050457:intron | 60.0% | |
GACAGTGGCAACAGCTGCAG+CGG | - | chr3.2:44257674-44257693 | MS.gene050457:CDS | 60.0% | |
GAGCCCAGATGGTTGGACAG+TGG | - | chr3.2:44257659-44257678 | MS.gene050457:CDS | 60.0% | |
GCCCCGGCGAATTATTCCTC+AGG | - | chr3.2:44256238-44256257 | MS.gene050457:CDS | 60.0% | |
GTGGGCATAGGCAGCGAGTA+GGG | - | chr3.2:44257109-44257128 | MS.gene050457:intron | 60.0% | |
CTAGCTACTGGCGGAGGCAG+TGG | - | chr3.2:44257417-44257436 | MS.gene050457:intron | 65.0% | |
GGTGGGCATAGGCAGCGAGT+AGG | - | chr3.2:44257108-44257127 | MS.gene050457:intron | 65.0% | |
TGGCGCAGAGCCCAGATGGT+TGG | - | chr3.2:44257652-44257671 | MS.gene050457:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 44255972 | 44257803 | 44255972 | ID=MS.gene050457 |
chr3.2 | mRNA | 44255972 | 44257803 | 44255972 | ID=MS.gene050457.t1;Parent=MS.gene050457 |
chr3.2 | exon | 44257516 | 44257803 | 44257516 | ID=MS.gene050457.t1.exon1;Parent=MS.gene050457.t1 |
chr3.2 | CDS | 44257516 | 44257803 | 44257516 | ID=cds.MS.gene050457.t1;Parent=MS.gene050457.t1 |
chr3.2 | exon | 44256791 | 44257060 | 44256791 | ID=MS.gene050457.t1.exon2;Parent=MS.gene050457.t1 |
chr3.2 | CDS | 44256791 | 44257060 | 44256791 | ID=cds.MS.gene050457.t1;Parent=MS.gene050457.t1 |
chr3.2 | exon | 44255972 | 44256682 | 44255972 | ID=MS.gene050457.t1.exon3;Parent=MS.gene050457.t1 |
chr3.2 | CDS | 44255972 | 44256682 | 44255972 | ID=cds.MS.gene050457.t1;Parent=MS.gene050457.t1 |
Gene Sequence |
Protein sequence |