Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027074.t1 | XP_003600092.1 | 94.2 | 428 | 19 | 2 | 1 | 422 | 32 | 459 | 4.50E-240 | 840.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027074.t1 | Q9SZA4 | 77.0 | 427 | 90 | 3 | 1 | 422 | 34 | 457 | 2.6e-196 | 686.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027074.t1 | G7IY01 | 94.2 | 428 | 19 | 2 | 1 | 422 | 32 | 459 | 3.2e-240 | 840.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027074.t1 | MTR_3g051690 | 94.159 | 428 | 19 | 2 | 1 | 422 | 32 | 459 | 0.0 | 840 |
MS.gene027074.t1 | MTR_5g008010 | 90.164 | 427 | 33 | 4 | 1 | 422 | 32 | 454 | 0.0 | 795 |
MS.gene027074.t1 | MTR_7g106870 | 74.592 | 429 | 98 | 6 | 1 | 422 | 33 | 457 | 0.0 | 667 |
MS.gene027074.t1 | MTR_7g451830 | 67.599 | 429 | 115 | 8 | 2 | 422 | 19 | 431 | 0.0 | 568 |
MS.gene027074.t1 | MTR_7g047640 | 67.599 | 429 | 115 | 8 | 2 | 422 | 19 | 431 | 0.0 | 568 |
MS.gene027074.t1 | MTR_7g057540 | 64.884 | 430 | 125 | 8 | 1 | 422 | 15 | 426 | 0.0 | 533 |
MS.gene027074.t1 | MTR_7g055590 | 64.802 | 429 | 125 | 8 | 1 | 421 | 15 | 425 | 0.0 | 531 |
MS.gene027074.t1 | MTR_7g053100 | 62.005 | 429 | 139 | 7 | 1 | 422 | 25 | 436 | 0.0 | 517 |
MS.gene027074.t1 | MTR_7g034625 | 70.219 | 319 | 88 | 2 | 97 | 408 | 13 | 331 | 9.02e-166 | 469 |
MS.gene027074.t1 | MTR_2g100540 | 50.580 | 431 | 158 | 12 | 2 | 422 | 12 | 397 | 3.13e-127 | 373 |
MS.gene027074.t1 | MTR_2g100460 | 56.560 | 343 | 135 | 5 | 80 | 420 | 52 | 382 | 2.48e-126 | 370 |
MS.gene027074.t1 | MTR_2g060710 | 44.282 | 411 | 207 | 8 | 2 | 398 | 26 | 428 | 2.02e-119 | 355 |
MS.gene027074.t1 | MTR_3g067940 | 44.286 | 420 | 212 | 7 | 2 | 409 | 57 | 466 | 4.33e-116 | 348 |
MS.gene027074.t1 | MTR_4g102510 | 43.198 | 419 | 206 | 7 | 2 | 401 | 51 | 456 | 1.15e-110 | 333 |
MS.gene027074.t1 | MTR_4g415070 | 52.941 | 68 | 32 | 0 | 347 | 414 | 57 | 124 | 1.04e-16 | 80.9 |
MS.gene027074.t1 | MTR_1g054300 | 26.250 | 320 | 175 | 11 | 147 | 419 | 114 | 419 | 1.71e-15 | 78.6 |
MS.gene027074.t1 | MTR_1g054300 | 26.119 | 268 | 170 | 11 | 134 | 394 | 235 | 481 | 1.99e-14 | 75.5 |
MS.gene027074.t1 | MTR_2g012630 | 27.397 | 219 | 148 | 8 | 127 | 342 | 35 | 245 | 2.78e-15 | 78.6 |
MS.gene027074.t1 | MTR_2g012630 | 27.397 | 219 | 148 | 8 | 127 | 342 | 35 | 245 | 3.07e-15 | 78.6 |
MS.gene027074.t1 | MTR_6g004040 | 28.326 | 233 | 153 | 10 | 113 | 339 | 19 | 243 | 6.04e-15 | 77.4 |
MS.gene027074.t1 | MTR_5g016370 | 23.693 | 287 | 163 | 8 | 116 | 394 | 312 | 550 | 1.26e-14 | 76.3 |
MS.gene027074.t1 | MTR_5g016350 | 22.997 | 287 | 179 | 7 | 110 | 395 | 230 | 475 | 5.99e-13 | 70.9 |
MS.gene027074.t1 | MTR_5g016350 | 22.997 | 287 | 179 | 7 | 110 | 395 | 294 | 539 | 6.26e-13 | 70.9 |
MS.gene027074.t1 | MTR_4g095058 | 24.752 | 303 | 192 | 13 | 120 | 395 | 241 | 534 | 5.72e-12 | 67.8 |
MS.gene027074.t1 | MTR_4g095058 | 24.382 | 283 | 168 | 11 | 116 | 395 | 293 | 532 | 5.96e-12 | 67.8 |
MS.gene027074.t1 | MTR_3g106080 | 24.351 | 308 | 191 | 10 | 128 | 403 | 326 | 623 | 9.51e-12 | 67.4 |
MS.gene027074.t1 | MTR_7g086360 | 23.415 | 205 | 150 | 4 | 193 | 395 | 53 | 252 | 2.44e-11 | 65.1 |
MS.gene027074.t1 | MTR_1g049000 | 39.362 | 94 | 47 | 3 | 173 | 257 | 8 | 100 | 4.71e-11 | 62.0 |
MS.gene027074.t1 | MTR_4g119620 | 22.581 | 248 | 177 | 7 | 155 | 394 | 81 | 321 | 5.12e-11 | 63.9 |
MS.gene027074.t1 | MTR_5g022690 | 27.011 | 174 | 120 | 5 | 139 | 310 | 266 | 434 | 8.58e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027074.t1 | AT4G33270 | 77.049 | 427 | 90 | 4 | 1 | 422 | 34 | 457 | 0.0 | 685 |
MS.gene027074.t1 | AT4G33260 | 76.815 | 427 | 91 | 4 | 1 | 422 | 24 | 447 | 0.0 | 668 |
MS.gene027074.t1 | AT4G33260 | 75.122 | 410 | 94 | 4 | 1 | 405 | 24 | 430 | 0.0 | 635 |
MS.gene027074.t1 | AT5G27570 | 68.765 | 429 | 119 | 6 | 1 | 422 | 30 | 450 | 0.0 | 590 |
MS.gene027074.t1 | AT5G27080 | 67.366 | 429 | 125 | 6 | 1 | 422 | 22 | 442 | 0.0 | 583 |
MS.gene027074.t1 | AT5G26900 | 66.822 | 428 | 128 | 5 | 1 | 422 | 25 | 444 | 0.0 | 572 |
MS.gene027074.t1 | AT5G27945 | 61.725 | 371 | 122 | 5 | 68 | 422 | 62 | 428 | 2.25e-156 | 449 |
MS.gene027074.t1 | AT4G22910 | 42.822 | 411 | 216 | 7 | 2 | 401 | 62 | 464 | 8.99e-113 | 339 |
MS.gene027074.t1 | AT4G11920 | 42.118 | 425 | 212 | 8 | 2 | 407 | 53 | 462 | 1.83e-110 | 333 |
MS.gene027074.t1 | AT5G13840 | 51.475 | 305 | 145 | 3 | 100 | 404 | 164 | 465 | 2.88e-110 | 333 |
MS.gene027074.t1 | AT5G13840 | 51.475 | 305 | 145 | 3 | 100 | 404 | 164 | 465 | 2.88e-110 | 333 |
MS.gene027074.t1 | AT1G11160 | 28.155 | 206 | 131 | 7 | 119 | 313 | 16 | 215 | 4.98e-16 | 80.9 |
MS.gene027074.t1 | AT1G11160 | 28.155 | 206 | 131 | 7 | 119 | 313 | 16 | 215 | 5.38e-16 | 80.9 |
MS.gene027074.t1 | AT1G11160 | 28.155 | 206 | 131 | 7 | 119 | 313 | 16 | 215 | 5.48e-16 | 80.9 |
MS.gene027074.t1 | AT5G08390 | 29.060 | 234 | 136 | 10 | 109 | 339 | 37 | 243 | 1.12e-15 | 79.7 |
MS.gene027074.t1 | AT1G11160 | 30.247 | 162 | 105 | 6 | 154 | 313 | 18 | 173 | 5.82e-15 | 77.8 |
MS.gene027074.t1 | AT1G61210 | 26.339 | 224 | 142 | 8 | 111 | 319 | 6 | 221 | 1.55e-14 | 76.3 |
MS.gene027074.t1 | AT1G61210 | 26.126 | 222 | 145 | 8 | 111 | 319 | 6 | 221 | 1.80e-14 | 76.3 |
MS.gene027074.t1 | AT1G61210 | 26.339 | 224 | 142 | 8 | 111 | 319 | 6 | 221 | 1.85e-14 | 76.3 |
MS.gene027074.t1 | AT5G52820 | 28.226 | 248 | 154 | 12 | 155 | 396 | 244 | 473 | 3.81e-14 | 74.3 |
MS.gene027074.t1 | AT5G23430 | 28.774 | 212 | 138 | 9 | 113 | 319 | 19 | 222 | 1.53e-13 | 73.2 |
MS.gene027074.t1 | AT5G23430 | 28.774 | 212 | 138 | 9 | 113 | 319 | 19 | 222 | 1.76e-13 | 73.2 |
MS.gene027074.t1 | AT5G23430 | 28.774 | 212 | 138 | 9 | 113 | 319 | 19 | 222 | 1.76e-13 | 73.2 |
MS.gene027074.t1 | AT5G25150 | 25.749 | 334 | 209 | 12 | 104 | 409 | 305 | 627 | 4.36e-13 | 71.6 |
MS.gene027074.t1 | AT5G25150 | 25.749 | 334 | 209 | 12 | 104 | 409 | 305 | 627 | 4.58e-13 | 71.6 |
MS.gene027074.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 553 | 784 | 6.06e-13 | 71.2 |
MS.gene027074.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 574 | 805 | 6.47e-13 | 71.2 |
MS.gene027074.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 555 | 786 | 6.57e-13 | 71.2 |
MS.gene027074.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 555 | 786 | 6.57e-13 | 71.2 |
MS.gene027074.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 555 | 786 | 6.57e-13 | 71.2 |
MS.gene027074.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 555 | 786 | 6.57e-13 | 71.2 |
MS.gene027074.t1 | AT2G32700 | 25.610 | 246 | 163 | 11 | 155 | 394 | 555 | 786 | 6.57e-13 | 71.2 |
MS.gene027074.t1 | AT5G67320 | 25.000 | 284 | 165 | 12 | 116 | 395 | 330 | 569 | 2.19e-12 | 69.3 |
MS.gene027074.t1 | AT3G49660 | 23.600 | 250 | 177 | 8 | 151 | 394 | 71 | 312 | 4.31e-12 | 67.4 |
MS.gene027074.t1 | AT5G13480 | 31.319 | 182 | 115 | 7 | 131 | 309 | 241 | 415 | 1.17e-11 | 67.0 |
MS.gene027074.t1 | AT5G13480 | 27.391 | 230 | 148 | 10 | 155 | 377 | 137 | 354 | 1.86e-11 | 66.6 |
MS.gene027074.t1 | AT5G13480 | 31.319 | 182 | 115 | 7 | 131 | 309 | 218 | 392 | 1.19e-11 | 67.0 |
MS.gene027074.t1 | AT5G13480 | 27.391 | 230 | 148 | 10 | 155 | 377 | 114 | 331 | 2.09e-11 | 66.2 |
MS.gene027074.t1 | AT2G33340 | 26.042 | 192 | 134 | 5 | 207 | 395 | 236 | 422 | 1.25e-11 | 67.0 |
MS.gene027074.t1 | AT2G33340 | 26.042 | 192 | 134 | 5 | 207 | 395 | 236 | 422 | 1.25e-11 | 67.0 |
MS.gene027074.t1 | AT2G41500 | 25.203 | 246 | 134 | 8 | 155 | 398 | 342 | 539 | 1.37e-11 | 66.6 |
MS.gene027074.t1 | AT2G41500 | 25.203 | 246 | 134 | 8 | 155 | 398 | 342 | 539 | 1.37e-11 | 66.6 |
MS.gene027074.t1 | AT2G33340 | 26.042 | 192 | 134 | 5 | 207 | 395 | 236 | 422 | 1.44e-11 | 66.6 |
MS.gene027074.t1 | AT5G13480 | 31.319 | 182 | 115 | 7 | 131 | 309 | 218 | 392 | 1.49e-11 | 66.6 |
MS.gene027074.t1 | AT5G13480 | 27.391 | 230 | 148 | 10 | 155 | 377 | 114 | 331 | 2.46e-11 | 66.2 |
MS.gene027074.t1 | AT5G13480 | 31.319 | 182 | 115 | 7 | 131 | 309 | 230 | 404 | 1.77e-11 | 66.6 |
MS.gene027074.t1 | AT5G13480 | 27.391 | 230 | 148 | 10 | 155 | 377 | 126 | 343 | 2.72e-11 | 65.9 |
MS.gene027074.t1 | AT1G04510 | 25.116 | 215 | 152 | 5 | 207 | 417 | 236 | 445 | 3.12e-11 | 65.5 |
MS.gene027074.t1 | AT1G04510 | 25.116 | 215 | 152 | 5 | 207 | 417 | 236 | 445 | 3.32e-11 | 65.5 |
MS.gene027074.t1 | AT4G02730 | 26.852 | 216 | 145 | 9 | 185 | 395 | 34 | 241 | 3.86e-11 | 64.3 |
MS.gene027074.t1 | AT5G56130 | 23.786 | 206 | 113 | 5 | 232 | 395 | 16 | 219 | 7.04e-11 | 63.5 |
Find 126 sgRNAs with CRISPR-Local
Find 143 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGATGAAACCTTGAGGTTT+TGG | 0.193519 | 3.2:+44373471 | MS.gene027074:CDS |
TGACTATTACCTCAATTTAC+TGG | 0.257532 | 3.2:+44372530 | MS.gene027074:CDS |
GTTGCCACTGTCCAACCATC+TGG | 0.273358 | 3.2:-44373440 | None:intergenic |
TTACCTCAATTTACTGGATT+GGG | 0.283267 | 3.2:+44372536 | MS.gene027074:CDS |
AATGTTCTTGCAATTGGATT+AGG | 0.295419 | 3.2:+44372567 | MS.gene027074:CDS |
CTCCTTCCAGAGAAGCTTAC+AGG | 0.301895 | 3.2:+44371998 | MS.gene027074:CDS |
ATGCGGCTCAAATGTGAAAA+TGG | 0.324208 | 3.2:-44373551 | None:intergenic |
AGCGCCAATGTTCTTGCAAT+TGG | 0.327966 | 3.2:+44372561 | MS.gene027074:CDS |
GTTCTTGAAAGCTAGAATTC+TGG | 0.331154 | 3.2:-44372055 | None:intergenic |
GCAGACTTCTGAGAGGATAT+TGG | 0.341248 | 3.2:+44372488 | MS.gene027074:intron |
ATGATAATCAACTTTACATC+TGG | 0.350065 | 3.2:+44373078 | MS.gene027074:CDS |
AATGGCTCAACTCTTGCTTT+TGG | 0.357983 | 3.2:-44373533 | None:intergenic |
GCGATGAAACCATCAAGTTT+TGG | 0.364930 | 3.2:+44373216 | MS.gene027074:CDS |
GGATTGAAATGGTCAGCTTC+TGG | 0.370788 | 3.2:+44373032 | MS.gene027074:CDS |
ATTACCTCAATTTACTGGAT+TGG | 0.371678 | 3.2:+44372535 | MS.gene027074:CDS |
TAGCTTCCTGTAAGCTTCTC+TGG | 0.375997 | 3.2:-44372004 | None:intergenic |
TCTCATTCTTGTTCCACAAC+AGG | 0.376647 | 3.2:-44373295 | None:intergenic |
GCTCCTGATGGCCGTCATAT+TGG | 0.389395 | 3.2:+44372684 | MS.gene027074:CDS |
ATTTCAATCCGCAAACTTCT+CGG | 0.394694 | 3.2:-44373019 | None:intergenic |
AATAATTCGCCGGGGCTTGA+TGG | 0.396021 | 3.2:-44372151 | None:intergenic |
CCCTATCACATCTGTAAGTT+GGG | 0.396604 | 3.2:+44372662 | MS.gene027074:CDS |
TCTGCCATCTTCACCATTGA+AGG | 0.397901 | 3.2:-44373374 | None:intergenic |
CTCAGTTGACACTGGGTCTC+AGG | 0.408962 | 3.2:+44373265 | MS.gene027074:CDS |
TAGGAAACACATTGTATTTG+TGG | 0.412235 | 3.2:+44372586 | MS.gene027074:CDS |
CAAGGGAATTTACTAGCTAC+TGG | 0.417964 | 3.2:+44373182 | MS.gene027074:CDS |
GCCCTATCACATCTGTAAGT+TGG | 0.420766 | 3.2:+44372661 | MS.gene027074:CDS |
CTCAGGTATGTTCCCTGTTG+TGG | 0.426699 | 3.2:+44373282 | MS.gene027074:CDS |
TAATAGTCATCCACAATGTC+TGG | 0.428065 | 3.2:-44372516 | None:intergenic |
GTGGGTATTCCAAAACTTGA+TGG | 0.428833 | 3.2:-44373225 | None:intergenic |
TAGGCAGCGAGTAGGGTCTT+TGG | 0.428851 | 3.2:+44372893 | MS.gene027074:CDS |
CAGAAGCTCTAAACATGAAC+AGG | 0.436496 | 3.2:+44372031 | MS.gene027074:CDS |
AAATCCATAGCTGATCTATT+CGG | 0.447023 | 3.2:-44371907 | None:intergenic |
GAGAAGTTTGCGGATTGAAA+TGG | 0.447588 | 3.2:+44373021 | MS.gene027074:CDS |
CTTGCTTGGTGTCCTTTCCA+AGG | 0.448593 | 3.2:+44373164 | MS.gene027074:CDS |
GCCCAACTTACAGATGTGAT+AGG | 0.450468 | 3.2:-44372663 | None:intergenic |
GTCAGCTTCTGGTCTACAAT+TGG | 0.451980 | 3.2:+44373043 | MS.gene027074:CDS |
AGGAAACACATTGTATTTGT+GGG | 0.452538 | 3.2:+44372587 | MS.gene027074:CDS |
CTTCAACAAGGTGGCTTCAC+AGG | 0.460645 | 3.2:+44373111 | MS.gene027074:CDS |
CTGCAGTAAAAGCGCTTGCT+TGG | 0.476217 | 3.2:+44373150 | MS.gene027074:CDS |
CACAGAATCAGATAACACTT+TGG | 0.480456 | 3.2:+44373345 | MS.gene027074:CDS |
TCATGAGAGAAGAAATCAAC+TGG | 0.484334 | 3.2:-44372093 | None:intergenic |
ACAACTCTGAAGTGCAGCTA+TGG | 0.484474 | 3.2:+44372718 | MS.gene027074:CDS |
GGATACAGCTTCAGATAGAC+AGG | 0.484963 | 3.2:+44372740 | MS.gene027074:CDS |
ATGCCAATATGACGGCCATC+AGG | 0.485428 | 3.2:-44372687 | None:intergenic |
CTAGCTACTGGCGGAGGCAG+TGG | 0.487153 | 3.2:+44373194 | MS.gene027074:CDS |
CACTTCAAGAGTTCTTCATA+TGG | 0.487383 | 3.2:+44373409 | MS.gene027074:CDS |
TTGATTATCATTCCCTCCAC+TGG | 0.491219 | 3.2:-44373066 | None:intergenic |
TTGCCACTGTCCAACCATCT+GGG | 0.492660 | 3.2:-44373439 | None:intergenic |
TGGAAGGAGAGCACACTTGT+GGG | 0.493184 | 3.2:-44371984 | None:intergenic |
ACTTTGGAAATATCCTTCAA+TGG | 0.495344 | 3.2:+44373361 | MS.gene027074:CDS |
GATGGCCGTCATATTGGCAT+TGG | 0.495923 | 3.2:+44372690 | MS.gene027074:CDS |
ATATCCTTCAATGGTGAAGA+TGG | 0.498891 | 3.2:+44373370 | MS.gene027074:CDS |
AACAACCACATACTCACAAC+CGG | 0.499451 | 3.2:+44372921 | MS.gene027074:CDS |
TTGCTTGGTGTCCTTTCCAA+GGG | 0.501380 | 3.2:+44373165 | MS.gene027074:CDS |
CGCACTACATGGTGACTGAA+GGG | 0.507766 | 3.2:+44371938 | MS.gene027074:CDS |
CTGGAAGGAGAGCACACTTG+TGG | 0.508404 | 3.2:-44371985 | None:intergenic |
AAGAAATCAACTGGCGGCGT+AGG | 0.510142 | 3.2:-44372084 | None:intergenic |
GGGCATGACCGAGAAGTTTG+CGG | 0.518071 | 3.2:+44373011 | MS.gene027074:CDS |
CTGCAGTTGAGAACTTTGAA+AGG | 0.529944 | 3.2:+44372864 | MS.gene027074:intron |
GAACTTTGAAAGGTGGGCAT+AGG | 0.530523 | 3.2:+44372874 | MS.gene027074:CDS |
GCCCCGGCGAATTATTCCTC+AGG | 0.533857 | 3.2:+44372158 | MS.gene027074:CDS |
CTCATTCTTGTTCCACAACA+GGG | 0.537252 | 3.2:-44373294 | None:intergenic |
ACACCTGAGGAATAATTCGC+CGG | 0.542147 | 3.2:-44372161 | None:intergenic |
TGATAATCAACTTTACATCT+GGG | 0.543770 | 3.2:+44373079 | MS.gene027074:CDS |
TTTCGATTATGCGCACTACA+TGG | 0.544215 | 3.2:+44371927 | MS.gene027074:CDS |
TGCTTGAACTCAGTTGACAC+TGG | 0.544299 | 3.2:+44373257 | MS.gene027074:CDS |
GACAGTGGCAACAGCTGCAG+CGG | 0.545471 | 3.2:+44373451 | MS.gene027074:CDS |
AGGGAGCTACTCAGCTCTCA+TGG | 0.545560 | 3.2:+44373317 | MS.gene027074:CDS |
TATTTGTGGGATGCATCAAA+CGG | 0.551368 | 3.2:+44372600 | MS.gene027074:CDS |
AAATCAACTGGCGGCGTAGG+TGG | 0.551699 | 3.2:-44372081 | None:intergenic |
CAACTCTGAAGTGCAGCTAT+GGG | 0.552386 | 3.2:+44372719 | MS.gene027074:CDS |
TAATCCAATTGCAAGAACAT+TGG | 0.554610 | 3.2:-44372565 | None:intergenic |
CTCACAACCGGAGGGATGGA+TGG | 0.555824 | 3.2:+44372933 | MS.gene027074:CDS |
CATATGGCGCAGAGCCCAGA+TGG | 0.555918 | 3.2:+44373425 | MS.gene027074:CDS |
GTGGGCATAGGCAGCGAGTA+GGG | 0.557831 | 3.2:+44372886 | MS.gene027074:CDS |
CACCTGAGGAATAATTCGCC+GGG | 0.559324 | 3.2:-44372160 | None:intergenic |
AGTTGAGAACTTTGAAAGGT+GGG | 0.559397 | 3.2:+44372868 | MS.gene027074:intron |
TGGCGCAGAGCCCAGATGGT+TGG | 0.562028 | 3.2:+44373429 | MS.gene027074:CDS |
TACCTCAATTTACTGGATTG+GGG | 0.562441 | 3.2:+44372537 | MS.gene027074:CDS |
GCTAGTAAATTCCCTTGGAA+AGG | 0.568517 | 3.2:-44373176 | None:intergenic |
GTCTACAATTGGCCAGTGGA+GGG | 0.570881 | 3.2:+44373054 | MS.gene027074:CDS |
GTGAAGATGGCAGAACTCAA+TGG | 0.571074 | 3.2:+44373383 | MS.gene027074:CDS |
GCGCACTACATGGTGACTGA+AGG | 0.571364 | 3.2:+44371937 | MS.gene027074:CDS |
CATACTCACAACCGGAGGGA+TGG | 0.571933 | 3.2:+44372929 | MS.gene027074:CDS |
CAGTTGAGAACTTTGAAAGG+TGG | 0.572101 | 3.2:+44372867 | MS.gene027074:intron |
GGTCTACAATTGGCCAGTGG+AGG | 0.575013 | 3.2:+44373053 | MS.gene027074:CDS |
TTCCCCAATCCAGTAAATTG+AGG | 0.576674 | 3.2:-44372539 | None:intergenic |
TCCCTCCGGTTGTGAGTATG+TGG | 0.579028 | 3.2:-44372926 | None:intergenic |
TTCCTGTAAGCTTCTCTGGA+AGG | 0.579286 | 3.2:-44372000 | None:intergenic |
ACTGAAGGGGCTAAAGCTAA+AGG | 0.581037 | 3.2:+44371952 | MS.gene027074:CDS |
AGGGGCTAAAGCTAAAGGTA+AGG | 0.581254 | 3.2:+44371957 | MS.gene027074:CDS |
TCTGTAAGTTGGGCTCCTGA+TGG | 0.584539 | 3.2:+44372672 | MS.gene027074:CDS |
CCCAACTTACAGATGTGATA+GGG | 0.585245 | 3.2:-44372662 | None:intergenic |
AATTCTACCATCCATCCCTC+CGG | 0.585408 | 3.2:-44372940 | None:intergenic |
AAAAGCATTCCAAAACCTCA+AGG | 0.587395 | 3.2:-44373480 | None:intergenic |
TGCATCAAACGGTTCCACTT+CGG | 0.590792 | 3.2:+44372611 | MS.gene027074:CDS |
GGTGGGCATAGGCAGCGAGT+AGG | 0.596714 | 3.2:+44372885 | MS.gene027074:CDS |
CATACCGAATAGATCAGCTA+TGG | 0.601151 | 3.2:+44371903 | MS.gene027074:CDS |
AGCGAGTAGGGTCTTTGGCA+TGG | 0.601597 | 3.2:+44372898 | MS.gene027074:CDS |
AACGGTAACAAGTTCCGAAG+TGG | 0.605642 | 3.2:-44372625 | None:intergenic |
GTTACCGTTGATGATGAAGA+TGG | 0.607070 | 3.2:+44372639 | MS.gene027074:CDS |
ATTGGATGCTCCAGACATTG+TGG | 0.612151 | 3.2:+44372506 | MS.gene027074:CDS |
AAGATAAAACCATCAAGCCC+CGG | 0.617625 | 3.2:+44372142 | MS.gene027074:CDS |
TGTTGTGGAACAAGAATGAG+AGG | 0.618210 | 3.2:+44373297 | MS.gene027074:CDS |
AGGGCCATCTTCATCATCAA+CGG | 0.626287 | 3.2:-44372643 | None:intergenic |
GCTTGAACTCAGTTGACACT+GGG | 0.627877 | 3.2:+44373258 | MS.gene027074:CDS |
CAGTAGCTAGTAAATTCCCT+TGG | 0.629888 | 3.2:-44373181 | None:intergenic |
AATTTACTAGCTACTGGCGG+AGG | 0.633586 | 3.2:+44373188 | MS.gene027074:CDS |
TCAAGCCAATGCCAATATGA+CGG | 0.636859 | 3.2:-44372695 | None:intergenic |
GAGCCCAGATGGTTGGACAG+TGG | 0.641101 | 3.2:+44373436 | MS.gene027074:CDS |
ATGTTACTGCTTATCGAATG+CGG | 0.643437 | 3.2:-44373568 | None:intergenic |
ACCACATACTCACAACCGGA+GGG | 0.650856 | 3.2:+44372925 | MS.gene027074:CDS |
GCACTACATGGTGACTGAAG+GGG | 0.656801 | 3.2:+44371939 | MS.gene027074:CDS |
GTTCAAGCATGCACCTGTGT+GGG | 0.668846 | 3.2:-44373243 | None:intergenic |
CTGCAGCGGATGAAACCTTG+AGG | 0.678181 | 3.2:+44373465 | MS.gene027074:CDS |
AGTTCAAGCATGCACCTGTG+TGG | 0.678713 | 3.2:-44373244 | None:intergenic |
TCTGGTCTACAATTGGCCAG+TGG | 0.684216 | 3.2:+44373050 | MS.gene027074:CDS |
ACATTGTTGAAACATACAGA+GGG | 0.688874 | 3.2:+44372991 | MS.gene027074:CDS |
AACCACATACTCACAACCGG+AGG | 0.695066 | 3.2:+44372924 | MS.gene027074:CDS |
TGAGAGAAGAAATCAACTGG+CGG | 0.700989 | 3.2:-44372090 | None:intergenic |
CACATTGTTGAAACATACAG+AGG | 0.702329 | 3.2:+44372990 | MS.gene027074:CDS |
GGGATAGAAGTACTTCAACA+AGG | 0.702662 | 3.2:+44373099 | MS.gene027074:CDS |
GGGAATTTACTAGCTACTGG+CGG | 0.715639 | 3.2:+44373185 | MS.gene027074:CDS |
GTTGTGGAACAAGAATGAGA+GGG | 0.727155 | 3.2:+44373298 | MS.gene027074:CDS |
ACCTGAGGAATAATTCGCCG+GGG | 0.733838 | 3.2:-44372159 | None:intergenic |
ATAGAAGTACTTCAACAAGG+TGG | 0.753913 | 3.2:+44373102 | MS.gene027074:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTCTCAATTCTTTTTAAAT+GGG | + | chr3.2:44372294-44372313 | MS.gene027074:intron | 15.0% |
!!! | TTTTCTCAATTCTTTTTAAA+TGG | + | chr3.2:44372293-44372312 | MS.gene027074:intron | 15.0% |
!! | AATATTAGAAAACTAGTAGT+AGG | - | chr3.2:44372829-44372848 | None:intergenic | 20.0% |
!!! | ATAATAATGTATCGATTGAA+GGG | - | chr3.2:44372786-44372805 | None:intergenic | 20.0% |
!!! | ATTAGTTTTTGAAAATCAAG+TGG | + | chr3.2:44372260-44372279 | MS.gene027074:intron | 20.0% |
!!! | TTAGTTTTTGAAAATCAAGT+GGG | + | chr3.2:44372261-44372280 | MS.gene027074:intron | 20.0% |
! | ATGATAATCAACTTTACATC+TGG | + | chr3.2:44373078-44373097 | MS.gene027074:CDS | 25.0% |
! | TGATAATCAACTTTACATCT+GGG | + | chr3.2:44373079-44373098 | MS.gene027074:CDS | 25.0% |
!! | CACAAAATTGCAAAATCTTT+TGG | - | chr3.2:44372445-44372464 | None:intergenic | 25.0% |
!! | GATTTGAGAATTTTGAACTT+CGG | + | chr3.2:44372380-44372399 | MS.gene027074:intron | 25.0% |
!!! | CATAATAATGTATCGATTGA+AGG | - | chr3.2:44372787-44372806 | None:intergenic | 25.0% |
!!! | TCTTGTTCTAGTTAATTTGT+TGG | + | chr3.2:44372351-44372370 | MS.gene027074:intron | 25.0% |
AAATCCATAGCTGATCTATT+CGG | - | chr3.2:44371910-44371929 | None:intergenic | 30.0% | |
AATGTTCTTGCAATTGGATT+AGG | + | chr3.2:44372567-44372586 | MS.gene027074:CDS | 30.0% | |
ACATTGTTGAAACATACAGA+GGG | + | chr3.2:44372991-44373010 | MS.gene027074:CDS | 30.0% | |
AGAAAACTAGTAGTAGGAAA+TGG | - | chr3.2:44372823-44372842 | None:intergenic | 30.0% | |
AGGAAACACATTGTATTTGT+GGG | + | chr3.2:44372587-44372606 | MS.gene027074:CDS | 30.0% | |
ATTACCTCAATTTACTGGAT+TGG | + | chr3.2:44372535-44372554 | MS.gene027074:CDS | 30.0% | |
TAATCCAATTGCAAGAACAT+TGG | - | chr3.2:44372568-44372587 | None:intergenic | 30.0% | |
TAGGAAACACATTGTATTTG+TGG | + | chr3.2:44372586-44372605 | MS.gene027074:CDS | 30.0% | |
TGACTATTACCTCAATTTAC+TGG | + | chr3.2:44372530-44372549 | MS.gene027074:CDS | 30.0% | |
TTACCTCAATTTACTGGATT+GGG | + | chr3.2:44372536-44372555 | MS.gene027074:CDS | 30.0% | |
! | ACTTTGGAAATATCCTTCAA+TGG | + | chr3.2:44373361-44373380 | MS.gene027074:CDS | 30.0% |
!! | AGACAGGTTTTATACTTATC+TGG | + | chr3.2:44372756-44372775 | MS.gene027074:intron | 30.0% |
!! | TCTTTTTAAATGGGCTTGTT+TGG | + | chr3.2:44372303-44372322 | MS.gene027074:intron | 30.0% |
ATATCCTTCAATGGTGAAGA+TGG | + | chr3.2:44373370-44373389 | MS.gene027074:CDS | 35.0% | |
ATTTCAATCCGCAAACTTCT+CGG | - | chr3.2:44373022-44373041 | None:intergenic | 35.0% | |
CACAGAATCAGATAACACTT+TGG | + | chr3.2:44373345-44373364 | MS.gene027074:CDS | 35.0% | |
CACATTGTTGAAACATACAG+AGG | + | chr3.2:44372990-44373009 | MS.gene027074:CDS | 35.0% | |
CACTTCAAGAGTTCTTCATA+TGG | + | chr3.2:44373409-44373428 | MS.gene027074:CDS | 35.0% | |
GTTCTTGAAAGCTAGAATTC+TGG | - | chr3.2:44372058-44372077 | None:intergenic | 35.0% | |
TAATAGTCATCCACAATGTC+TGG | - | chr3.2:44372519-44372538 | None:intergenic | 35.0% | |
TACCTCAATTTACTGGATTG+GGG | + | chr3.2:44372537-44372556 | MS.gene027074:CDS | 35.0% | |
TATTTGTGGGATGCATCAAA+CGG | + | chr3.2:44372600-44372619 | MS.gene027074:CDS | 35.0% | |
TCATGAGAGAAGAAATCAAC+TGG | - | chr3.2:44372096-44372115 | None:intergenic | 35.0% | |
! | AGTTGAGAACTTTGAAAGGT+GGG | + | chr3.2:44372868-44372887 | MS.gene027074:intron | 35.0% |
!! | AAAAGCATTCCAAAACCTCA+AGG | - | chr3.2:44373483-44373502 | None:intergenic | 35.0% |
!! | ATAGAAGTACTTCAACAAGG+TGG | + | chr3.2:44373102-44373121 | MS.gene027074:CDS | 35.0% |
!!! | TTGAGGTTTTGGAATGCTTT+TGG | + | chr3.2:44373482-44373501 | MS.gene027074:CDS | 35.0% |
AACAACCACATACTCACAAC+CGG | + | chr3.2:44372921-44372940 | MS.gene027074:CDS | 40.0% | |
AAGATAAAACCATCAAGCCC+CGG | + | chr3.2:44372142-44372161 | MS.gene027074:CDS | 40.0% | |
ATGCGGCTCAAATGTGAAAA+TGG | - | chr3.2:44373554-44373573 | None:intergenic | 40.0% | |
CAAGGGAATTTACTAGCTAC+TGG | + | chr3.2:44373182-44373201 | MS.gene027074:CDS | 40.0% | |
CAGTAGCTAGTAAATTCCCT+TGG | - | chr3.2:44373184-44373203 | None:intergenic | 40.0% | |
CATACCGAATAGATCAGCTA+TGG | + | chr3.2:44371903-44371922 | MS.gene027074:CDS | 40.0% | |
CCCAACTTACAGATGTGATA+GGG | - | chr3.2:44372665-44372684 | None:intergenic | 40.0% | |
CCCTATCACATCTGTAAGTT+GGG | + | chr3.2:44372662-44372681 | MS.gene027074:CDS | 40.0% | |
CTCATTCTTGTTCCACAACA+GGG | - | chr3.2:44373297-44373316 | None:intergenic | 40.0% | |
CTGCAGTTGAGAACTTTGAA+AGG | + | chr3.2:44372864-44372883 | MS.gene027074:intron | 40.0% | |
GCTAGTAAATTCCCTTGGAA+AGG | - | chr3.2:44373179-44373198 | None:intergenic | 40.0% | |
GTGGGTATTCCAAAACTTGA+TGG | - | chr3.2:44373228-44373247 | None:intergenic | 40.0% | |
GTTGTGGAACAAGAATGAGA+GGG | + | chr3.2:44373298-44373317 | MS.gene027074:CDS | 40.0% | |
TCAAGCCAATGCCAATATGA+CGG | - | chr3.2:44372698-44372717 | None:intergenic | 40.0% | |
TCTCATTCTTGTTCCACAAC+AGG | - | chr3.2:44373298-44373317 | None:intergenic | 40.0% | |
TGAGAGAAGAAATCAACTGG+CGG | - | chr3.2:44372093-44372112 | None:intergenic | 40.0% | |
TGTTGTGGAACAAGAATGAG+AGG | + | chr3.2:44373297-44373316 | MS.gene027074:CDS | 40.0% | |
TTCCCCAATCCAGTAAATTG+AGG | - | chr3.2:44372542-44372561 | None:intergenic | 40.0% | |
TTGATTATCATTCCCTCCAC+TGG | - | chr3.2:44373069-44373088 | None:intergenic | 40.0% | |
TTTCGATTATGCGCACTACA+TGG | + | chr3.2:44371927-44371946 | MS.gene027074:CDS | 40.0% | |
! | AATGGCTCAACTCTTGCTTT+TGG | - | chr3.2:44373536-44373555 | None:intergenic | 40.0% |
! | CAGTTGAGAACTTTGAAAGG+TGG | + | chr3.2:44372867-44372886 | MS.gene027074:intron | 40.0% |
! | GAGAAGTTTGCGGATTGAAA+TGG | + | chr3.2:44373021-44373040 | MS.gene027074:CDS | 40.0% |
! | GCGATGAAACCATCAAGTTT+TGG | + | chr3.2:44373216-44373235 | MS.gene027074:CDS | 40.0% |
!! | CAGAAGCTCTAAACATGAAC+AGG | + | chr3.2:44372031-44372050 | MS.gene027074:CDS | 40.0% |
!! | GCAGCTTTTGTTGTAACTTC+TGG | - | chr3.2:44373512-44373531 | None:intergenic | 40.0% |
!! | GGGATAGAAGTACTTCAACA+AGG | + | chr3.2:44373099-44373118 | MS.gene027074:CDS | 40.0% |
!! | GTTACCGTTGATGATGAAGA+TGG | + | chr3.2:44372639-44372658 | MS.gene027074:CDS | 40.0% |
!! | TTGTTTTGCAGACTTCTGAG+AGG | + | chr3.2:44372481-44372500 | MS.gene027074:intron | 40.0% |
!!! | AAGTTTTGGAATACCCACAC+AGG | + | chr3.2:44373230-44373249 | MS.gene027074:CDS | 40.0% |
AACGGTAACAAGTTCCGAAG+TGG | - | chr3.2:44372628-44372647 | None:intergenic | 45.0% | |
AATTCTACCATCCATCCCTC+CGG | - | chr3.2:44372943-44372962 | None:intergenic | 45.0% | |
AATTTACTAGCTACTGGCGG+AGG | + | chr3.2:44373188-44373207 | MS.gene027074:CDS | 45.0% | |
ACACCTGAGGAATAATTCGC+CGG | - | chr3.2:44372164-44372183 | None:intergenic | 45.0% | |
ACTGAAGGGGCTAAAGCTAA+AGG | + | chr3.2:44371952-44371971 | MS.gene027074:CDS | 45.0% | |
AGCGCCAATGTTCTTGCAAT+TGG | + | chr3.2:44372561-44372580 | MS.gene027074:CDS | 45.0% | |
AGGGCCATCTTCATCATCAA+CGG | - | chr3.2:44372646-44372665 | None:intergenic | 45.0% | |
AGGGGCTAAAGCTAAAGGTA+AGG | + | chr3.2:44371957-44371976 | MS.gene027074:CDS | 45.0% | |
ATTGGATGCTCCAGACATTG+TGG | + | chr3.2:44372506-44372525 | MS.gene027074:CDS | 45.0% | |
GCCCAACTTACAGATGTGAT+AGG | - | chr3.2:44372666-44372685 | None:intergenic | 45.0% | |
GCCCTATCACATCTGTAAGT+TGG | + | chr3.2:44372661-44372680 | MS.gene027074:CDS | 45.0% | |
GCTTGAACTCAGTTGACACT+GGG | + | chr3.2:44373258-44373277 | MS.gene027074:CDS | 45.0% | |
GGATACAGCTTCAGATAGAC+AGG | + | chr3.2:44372740-44372759 | MS.gene027074:CDS | 45.0% | |
GGATTGAAATGGTCAGCTTC+TGG | + | chr3.2:44373032-44373051 | MS.gene027074:CDS | 45.0% | |
GGGAATTTACTAGCTACTGG+CGG | + | chr3.2:44373185-44373204 | MS.gene027074:CDS | 45.0% | |
GTCAGCTTCTGGTCTACAAT+TGG | + | chr3.2:44373043-44373062 | MS.gene027074:CDS | 45.0% | |
GTGAAGATGGCAGAACTCAA+TGG | + | chr3.2:44373383-44373402 | MS.gene027074:CDS | 45.0% | |
TAGCTTCCTGTAAGCTTCTC+TGG | - | chr3.2:44372007-44372026 | None:intergenic | 45.0% | |
TCTGCCATCTTCACCATTGA+AGG | - | chr3.2:44373377-44373396 | None:intergenic | 45.0% | |
TGCATCAAACGGTTCCACTT+CGG | + | chr3.2:44372611-44372630 | MS.gene027074:CDS | 45.0% | |
TGCTTGAACTCAGTTGACAC+TGG | + | chr3.2:44373257-44373276 | MS.gene027074:CDS | 45.0% | |
TTCCTGTAAGCTTCTCTGGA+AGG | - | chr3.2:44372003-44372022 | None:intergenic | 45.0% | |
! | CGGATGAAACCTTGAGGTTT+TGG | + | chr3.2:44373471-44373490 | MS.gene027074:CDS | 45.0% |
! | GAACTTTGAAAGGTGGGCAT+AGG | + | chr3.2:44372874-44372893 | MS.gene027074:CDS | 45.0% |
! | GCAGACTTCTGAGAGGATAT+TGG | + | chr3.2:44372488-44372507 | MS.gene027074:intron | 45.0% |
!! | ACAACTCTGAAGTGCAGCTA+TGG | + | chr3.2:44372718-44372737 | MS.gene027074:CDS | 45.0% |
!! | CAACTCTGAAGTGCAGCTAT+GGG | + | chr3.2:44372719-44372738 | MS.gene027074:CDS | 45.0% |
!! | TTGCTTGGTGTCCTTTCCAA+GGG | + | chr3.2:44373165-44373184 | MS.gene027074:CDS | 45.0% |
AACCACATACTCACAACCGG+AGG | + | chr3.2:44372924-44372943 | MS.gene027074:CDS | 50.0% | |
AAGAAATCAACTGGCGGCGT+AGG | - | chr3.2:44372087-44372106 | None:intergenic | 50.0% | |
AATAATTCGCCGGGGCTTGA+TGG | - | chr3.2:44372154-44372173 | None:intergenic | 50.0% | |
ACCACATACTCACAACCGGA+GGG | + | chr3.2:44372925-44372944 | MS.gene027074:CDS | 50.0% | |
ACCTGAGGAATAATTCGCCG+GGG | - | chr3.2:44372162-44372181 | None:intergenic | 50.0% | |
AGTTCAAGCATGCACCTGTG+TGG | - | chr3.2:44373247-44373266 | None:intergenic | 50.0% | |
ATGCCAATATGACGGCCATC+AGG | - | chr3.2:44372690-44372709 | None:intergenic | 50.0% | |
CACCTGAGGAATAATTCGCC+GGG | - | chr3.2:44372163-44372182 | None:intergenic | 50.0% | |
CGCACTACATGGTGACTGAA+GGG | + | chr3.2:44371938-44371957 | MS.gene027074:CDS | 50.0% | |
CTCAGGTATGTTCCCTGTTG+TGG | + | chr3.2:44373282-44373301 | MS.gene027074:CDS | 50.0% | |
CTCCTTCCAGAGAAGCTTAC+AGG | + | chr3.2:44371998-44372017 | MS.gene027074:CDS | 50.0% | |
CTTCAACAAGGTGGCTTCAC+AGG | + | chr3.2:44373111-44373130 | MS.gene027074:CDS | 50.0% | |
GATGGCCGTCATATTGGCAT+TGG | + | chr3.2:44372690-44372709 | MS.gene027074:CDS | 50.0% | |
GCACTACATGGTGACTGAAG+GGG | + | chr3.2:44371939-44371958 | MS.gene027074:CDS | 50.0% | |
GTCTACAATTGGCCAGTGGA+GGG | + | chr3.2:44373054-44373073 | MS.gene027074:CDS | 50.0% | |
GTTCAAGCATGCACCTGTGT+GGG | - | chr3.2:44373246-44373265 | None:intergenic | 50.0% | |
TCTGGTCTACAATTGGCCAG+TGG | + | chr3.2:44373050-44373069 | MS.gene027074:CDS | 50.0% | |
TTGCCACTGTCCAACCATCT+GGG | - | chr3.2:44373442-44373461 | None:intergenic | 50.0% | |
! | TCTGTAAGTTGGGCTCCTGA+TGG | + | chr3.2:44372672-44372691 | MS.gene027074:CDS | 50.0% |
! | TGGAAGGAGAGCACACTTGT+GGG | - | chr3.2:44371987-44372006 | None:intergenic | 50.0% |
!! | CTGCAGTAAAAGCGCTTGCT+TGG | + | chr3.2:44373150-44373169 | MS.gene027074:CDS | 50.0% |
!! | CTTGCTTGGTGTCCTTTCCA+AGG | + | chr3.2:44373164-44373183 | MS.gene027074:CDS | 50.0% |
AAATCAACTGGCGGCGTAGG+TGG | - | chr3.2:44372084-44372103 | None:intergenic | 55.0% | |
AGCGAGTAGGGTCTTTGGCA+TGG | + | chr3.2:44372898-44372917 | MS.gene027074:CDS | 55.0% | |
AGGGAGCTACTCAGCTCTCA+TGG | + | chr3.2:44373317-44373336 | MS.gene027074:CDS | 55.0% | |
CACACACACACACACACCTG+AGG | - | chr3.2:44372177-44372196 | None:intergenic | 55.0% | |
CATACTCACAACCGGAGGGA+TGG | + | chr3.2:44372929-44372948 | MS.gene027074:CDS | 55.0% | |
CTCAGTTGACACTGGGTCTC+AGG | + | chr3.2:44373265-44373284 | MS.gene027074:CDS | 55.0% | |
CTGCAGCGGATGAAACCTTG+AGG | + | chr3.2:44373465-44373484 | MS.gene027074:CDS | 55.0% | |
GCGCACTACATGGTGACTGA+AGG | + | chr3.2:44371937-44371956 | MS.gene027074:CDS | 55.0% | |
GCTCCTGATGGCCGTCATAT+TGG | + | chr3.2:44372684-44372703 | MS.gene027074:CDS | 55.0% | |
GGGCATGACCGAGAAGTTTG+CGG | + | chr3.2:44373011-44373030 | MS.gene027074:CDS | 55.0% | |
GGTCTACAATTGGCCAGTGG+AGG | + | chr3.2:44373053-44373072 | MS.gene027074:CDS | 55.0% | |
GTTGCCACTGTCCAACCATC+TGG | - | chr3.2:44373443-44373462 | None:intergenic | 55.0% | |
TAGGCAGCGAGTAGGGTCTT+TGG | + | chr3.2:44372893-44372912 | MS.gene027074:CDS | 55.0% | |
TCCCTCCGGTTGTGAGTATG+TGG | - | chr3.2:44372929-44372948 | None:intergenic | 55.0% | |
! | CTGGAAGGAGAGCACACTTG+TGG | - | chr3.2:44371988-44372007 | None:intergenic | 55.0% |
CATATGGCGCAGAGCCCAGA+TGG | + | chr3.2:44373425-44373444 | MS.gene027074:CDS | 60.0% | |
CTCACAACCGGAGGGATGGA+TGG | + | chr3.2:44372933-44372952 | MS.gene027074:CDS | 60.0% | |
GACAGTGGCAACAGCTGCAG+CGG | + | chr3.2:44373451-44373470 | MS.gene027074:CDS | 60.0% | |
GAGCCCAGATGGTTGGACAG+TGG | + | chr3.2:44373436-44373455 | MS.gene027074:CDS | 60.0% | |
GCCCCGGCGAATTATTCCTC+AGG | + | chr3.2:44372158-44372177 | MS.gene027074:CDS | 60.0% | |
GTGGGCATAGGCAGCGAGTA+GGG | + | chr3.2:44372886-44372905 | MS.gene027074:CDS | 60.0% | |
CTAGCTACTGGCGGAGGCAG+TGG | + | chr3.2:44373194-44373213 | MS.gene027074:CDS | 65.0% | |
GGTGGGCATAGGCAGCGAGT+AGG | + | chr3.2:44372885-44372904 | MS.gene027074:CDS | 65.0% | |
TGGCGCAGAGCCCAGATGGT+TGG | + | chr3.2:44373429-44373448 | MS.gene027074:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 44371892 | 44373580 | 44371892 | ID=MS.gene027074 |
chr3.2 | mRNA | 44371892 | 44373580 | 44371892 | ID=MS.gene027074.t1;Parent=MS.gene027074 |
chr3.2 | exon | 44371892 | 44372179 | 44371892 | ID=MS.gene027074.t1.exon1;Parent=MS.gene027074.t1 |
chr3.2 | CDS | 44371892 | 44372179 | 44371892 | ID=cds.MS.gene027074.t1;Parent=MS.gene027074.t1 |
chr3.2 | exon | 44372492 | 44372761 | 44372492 | ID=MS.gene027074.t1.exon2;Parent=MS.gene027074.t1 |
chr3.2 | CDS | 44372492 | 44372761 | 44372492 | ID=cds.MS.gene027074.t1;Parent=MS.gene027074.t1 |
chr3.2 | exon | 44372870 | 44373580 | 44372870 | ID=MS.gene027074.t1.exon3;Parent=MS.gene027074.t1 |
chr3.2 | CDS | 44372870 | 44373580 | 44372870 | ID=cds.MS.gene027074.t1;Parent=MS.gene027074.t1 |
Gene Sequence |
Protein sequence |