Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35804.t1 | XP_003596999.2 | 98.8 | 427 | 5 | 0 | 4 | 430 | 149 | 575 | 5.30E-244 | 853.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35804.t1 | Q94C37 | 77.6 | 428 | 83 | 3 | 5 | 430 | 147 | 563 | 3.3e-194 | 679.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35804.t1 | G7IKH9 | 98.8 | 427 | 5 | 0 | 4 | 430 | 149 | 575 | 3.8e-244 | 853.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene35804 | 0.832785 | 7.75E-56 | -1.69E-46 |
| MS.gene050128 | MS.gene35804 | 0.827669 | 1.38E-54 | -1.69E-46 |
| MS.gene050301 | MS.gene35804 | 0.830829 | 2.36E-55 | -1.69E-46 |
| MS.gene050397 | MS.gene35804 | 0.801373 | 9.28E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene35804 | 0.821826 | 3.28E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene35804 | 0.806053 | 9.91E-50 | -1.69E-46 |
| MS.gene051255 | MS.gene35804 | 0.862261 | 5.74E-64 | -1.69E-46 |
| MS.gene051360 | MS.gene35804 | 0.802242 | 6.16E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene35804 | 0.808405 | 3.15E-50 | -1.69E-46 |
| MS.gene052178 | MS.gene35804 | 0.841687 | 4.09E-58 | -1.69E-46 |
| MS.gene052188 | MS.gene35804 | 0.806171 | 9.36E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene35804 | 0.813074 | 3.08E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene35804 | 0.805044 | 1.61E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene35804 | 0.818646 | 1.76E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene35804 | 0.814284 | 1.67E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene35804 | 0.806218 | 9.15E-50 | -1.69E-46 |
| MS.gene053209 | MS.gene35804 | 0.811986 | 5.32E-51 | -1.69E-46 |
| MS.gene053813 | MS.gene35804 | 0.826421 | 2.74E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene35804 | 0.900129 | 9.97E-78 | -1.69E-46 |
| MS.gene054011 | MS.gene35804 | 0.892754 | 1.19E-74 | -1.69E-46 |
| MS.gene054012 | MS.gene35804 | 0.906713 | 1.11E-80 | -1.69E-46 |
| MS.gene054013 | MS.gene35804 | 0.905186 | 5.60E-80 | -1.69E-46 |
| MS.gene054123 | MS.gene35804 | 0.800266 | 1.56E-48 | -1.69E-46 |
| MS.gene054214 | MS.gene35804 | 0.813564 | 2.40E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene35804 | 0.844046 | 9.63E-59 | -1.69E-46 |
| MS.gene055390 | MS.gene35804 | 0.816135 | 6.46E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene35804 | 0.803924 | 2.76E-49 | -1.69E-46 |
| MS.gene055428 | MS.gene35804 | 0.800121 | 1.67E-48 | -1.69E-46 |
| MS.gene055604 | MS.gene35804 | 0.872847 | 2.32E-67 | -1.69E-46 |
| MS.gene056191 | MS.gene35804 | 0.849652 | 2.82E-60 | -1.69E-46 |
| MS.gene056410 | MS.gene35804 | 0.849856 | 2.47E-60 | -1.69E-46 |
| MS.gene056611 | MS.gene35804 | 0.825619 | 4.25E-54 | -1.69E-46 |
| MS.gene056902 | MS.gene35804 | 0.856565 | 2.95E-62 | -1.69E-46 |
| MS.gene056931 | MS.gene35804 | 0.820463 | 6.77E-53 | -1.69E-46 |
| MS.gene056933 | MS.gene35804 | 0.818961 | 1.49E-52 | -1.69E-46 |
| MS.gene056935 | MS.gene35804 | 0.804454 | 2.14E-49 | -1.69E-46 |
| MS.gene05702 | MS.gene35804 | 0.803781 | 2.96E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene35804 | 0.802173 | 6.36E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene35804 | 0.814027 | 1.90E-51 | -1.69E-46 |
| MS.gene057796 | MS.gene35804 | 0.806586 | 7.65E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene35804 | 0.810293 | 1.24E-50 | -1.69E-46 |
| MS.gene05811 | MS.gene35804 | 0.837231 | 5.87E-57 | -1.69E-46 |
| MS.gene05842 | MS.gene35804 | 0.824844 | 6.47E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene35804 | 0.818562 | 1.84E-52 | -1.69E-46 |
| MS.gene058928 | MS.gene35804 | 0.818325 | 2.08E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene35804 | 0.846197 | 2.53E-59 | -1.69E-46 |
| MS.gene059294 | MS.gene35804 | 0.848346 | 6.50E-60 | -1.69E-46 |
| MS.gene059676 | MS.gene35804 | 0.802864 | 4.58E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene35804 | 0.801841 | 7.44E-49 | -1.69E-46 |
| MS.gene059692 | MS.gene35804 | 0.804988 | 1.66E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene35804 | 0.806413 | 8.33E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene35804 | 0.812842 | 3.46E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene35804 | 0.829148 | 6.05E-55 | -1.69E-46 |
| MS.gene059974 | MS.gene35804 | 0.872386 | 3.31E-67 | -1.69E-46 |
| MS.gene060005 | MS.gene35804 | 0.832783 | 7.76E-56 | -1.69E-46 |
| MS.gene06037 | MS.gene35804 | 0.829783 | 4.24E-55 | -1.69E-46 |
| MS.gene060559 | MS.gene35804 | 0.817978 | 2.49E-52 | -1.69E-46 |
| MS.gene060800 | MS.gene35804 | 0.806113 | 9.63E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene35804 | 0.809487 | 1.85E-50 | -1.69E-46 |
| MS.gene060986 | MS.gene35804 | 0.806479 | 8.06E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene35804 | 0.820913 | 5.33E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35804.t1 | MTR_2g088470 | 98.837 | 430 | 5 | 0 | 1 | 430 | 146 | 575 | 0.0 | 884 |
| MS.gene35804.t1 | MTR_4g047800 | 86.636 | 434 | 49 | 6 | 1 | 430 | 139 | 567 | 0.0 | 764 |
| MS.gene35804.t1 | MTR_8g432540 | 50.549 | 455 | 194 | 6 | 1 | 430 | 194 | 642 | 2.33e-149 | 444 |
| MS.gene35804.t1 | MTR_7g076080 | 50.439 | 456 | 190 | 11 | 1 | 430 | 170 | 615 | 5.77e-147 | 437 |
| MS.gene35804.t1 | MTR_1g101280 | 46.491 | 456 | 210 | 7 | 3 | 430 | 137 | 586 | 1.97e-137 | 412 |
| MS.gene35804.t1 | MTR_5g005600 | 49.888 | 447 | 195 | 10 | 2 | 430 | 125 | 560 | 1.08e-134 | 404 |
| MS.gene35804.t1 | MTR_6g477820 | 46.085 | 447 | 218 | 11 | 3 | 431 | 110 | 551 | 1.23e-129 | 391 |
| MS.gene35804.t1 | MTR_5g029320 | 40.889 | 450 | 235 | 10 | 2 | 430 | 169 | 608 | 7.67e-115 | 355 |
| MS.gene35804.t1 | MTR_2g101720 | 40.632 | 443 | 227 | 7 | 3 | 435 | 220 | 636 | 2.31e-113 | 351 |
| MS.gene35804.t1 | MTR_0198s0030 | 39.956 | 458 | 233 | 9 | 3 | 430 | 136 | 581 | 2.38e-106 | 332 |
| MS.gene35804.t1 | MTR_7g427710 | 40.858 | 443 | 186 | 14 | 3 | 430 | 97 | 478 | 1.32e-95 | 300 |
| MS.gene35804.t1 | MTR_7g427690 | 40.852 | 399 | 173 | 12 | 44 | 430 | 28 | 375 | 2.43e-87 | 274 |
| MS.gene35804.t1 | MTR_2g030570 | 32.886 | 447 | 281 | 9 | 1 | 435 | 103 | 542 | 7.78e-76 | 250 |
| MS.gene35804.t1 | MTR_2g083350 | 42.587 | 317 | 165 | 5 | 117 | 430 | 69 | 371 | 6.04e-74 | 241 |
| MS.gene35804.t1 | MTR_2g030600 | 33.482 | 448 | 275 | 11 | 1 | 435 | 103 | 540 | 2.91e-73 | 243 |
| MS.gene35804.t1 | MTR_2g083330 | 39.748 | 317 | 176 | 5 | 117 | 430 | 65 | 369 | 6.37e-69 | 228 |
| MS.gene35804.t1 | MTR_2g030660 | 31.106 | 434 | 264 | 9 | 1 | 430 | 94 | 496 | 4.04e-57 | 199 |
| MS.gene35804.t1 | MTR_0653s0020 | 45.333 | 150 | 65 | 3 | 283 | 431 | 1 | 134 | 2.77e-37 | 135 |
| MS.gene35804.t1 | MTR_7g427700 | 32.895 | 228 | 100 | 7 | 3 | 222 | 97 | 279 | 1.99e-24 | 105 |
| MS.gene35804.t1 | MTR_1g105420 | 38.816 | 152 | 81 | 3 | 3 | 150 | 27 | 170 | 3.97e-23 | 97.4 |
| MS.gene35804.t1 | MTR_1g105420 | 75.000 | 40 | 9 | 1 | 223 | 261 | 171 | 210 | 2.40e-13 | 69.3 |
| MS.gene35804.t1 | MTR_7g027605 | 50.000 | 90 | 41 | 2 | 194 | 280 | 3 | 91 | 2.25e-20 | 85.9 |
| MS.gene35804.t1 | MTR_2g451350 | 32.061 | 131 | 87 | 1 | 119 | 247 | 1 | 131 | 1.64e-16 | 76.3 |
| MS.gene35804.t1 | MTR_2g030130 | 24.221 | 289 | 183 | 7 | 167 | 436 | 206 | 477 | 3.66e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene35804.t1 | AT4G04890 | 76.279 | 430 | 100 | 2 | 2 | 430 | 142 | 570 | 0.0 | 687 |
| MS.gene35804.t1 | AT4G04890 | 76.279 | 430 | 100 | 2 | 2 | 430 | 142 | 570 | 0.0 | 687 |
| MS.gene35804.t1 | AT4G21750 | 74.429 | 438 | 103 | 2 | 2 | 430 | 142 | 579 | 0.0 | 686 |
| MS.gene35804.t1 | AT4G21750 | 74.429 | 438 | 103 | 2 | 2 | 430 | 142 | 579 | 0.0 | 686 |
| MS.gene35804.t1 | AT4G21750 | 74.429 | 438 | 103 | 2 | 2 | 430 | 142 | 579 | 0.0 | 686 |
| MS.gene35804.t1 | AT4G21750 | 74.429 | 438 | 103 | 2 | 2 | 430 | 142 | 579 | 0.0 | 686 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT1G05230 | 77.315 | 432 | 85 | 3 | 1 | 430 | 143 | 563 | 0.0 | 676 |
| MS.gene35804.t1 | AT2G32370 | 51.584 | 442 | 192 | 8 | 2 | 435 | 148 | 575 | 4.84e-150 | 443 |
| MS.gene35804.t1 | AT3G61150 | 45.652 | 460 | 209 | 6 | 1 | 430 | 189 | 637 | 4.03e-135 | 407 |
| MS.gene35804.t1 | AT4G00730 | 48.533 | 443 | 201 | 9 | 1 | 430 | 213 | 641 | 7.24e-133 | 402 |
| MS.gene35804.t1 | AT1G73360 | 42.247 | 445 | 237 | 7 | 3 | 431 | 113 | 553 | 8.51e-112 | 345 |
| MS.gene35804.t1 | AT1G17920 | 42.534 | 442 | 232 | 9 | 3 | 431 | 102 | 534 | 8.66e-108 | 333 |
| MS.gene35804.t1 | AT1G17920 | 42.534 | 442 | 232 | 9 | 3 | 431 | 102 | 534 | 8.66e-108 | 333 |
| MS.gene35804.t1 | AT5G46880 | 41.357 | 457 | 225 | 13 | 11 | 430 | 200 | 650 | 2.18e-107 | 336 |
| MS.gene35804.t1 | AT5G46880 | 41.357 | 457 | 225 | 13 | 11 | 430 | 200 | 650 | 2.18e-107 | 336 |
| MS.gene35804.t1 | AT5G46880 | 41.357 | 457 | 225 | 13 | 11 | 430 | 200 | 650 | 2.18e-107 | 336 |
| MS.gene35804.t1 | AT5G52170 | 39.954 | 433 | 206 | 8 | 3 | 430 | 138 | 521 | 2.51e-99 | 311 |
| MS.gene35804.t1 | AT5G52170 | 40.185 | 433 | 200 | 10 | 3 | 430 | 138 | 516 | 5.66e-98 | 308 |
| MS.gene35804.t1 | AT5G52170 | 40.185 | 433 | 200 | 10 | 3 | 430 | 138 | 516 | 5.66e-98 | 308 |
| MS.gene35804.t1 | AT4G00730 | 45.658 | 357 | 169 | 7 | 1 | 345 | 213 | 556 | 1.48e-97 | 303 |
| MS.gene35804.t1 | AT1G79840 | 38.902 | 437 | 222 | 11 | 4 | 430 | 183 | 584 | 2.47e-96 | 302 |
| MS.gene35804.t1 | AT1G79840 | 38.584 | 438 | 224 | 10 | 3 | 430 | 124 | 526 | 1.57e-95 | 301 |
| MS.gene35804.t1 | AT1G79840 | 38.584 | 438 | 224 | 10 | 3 | 430 | 124 | 526 | 1.57e-95 | 301 |
| MS.gene35804.t1 | AT1G79840 | 38.584 | 438 | 224 | 10 | 3 | 430 | 182 | 584 | 4.12e-95 | 302 |
| MS.gene35804.t1 | AT1G79840 | 38.584 | 438 | 224 | 10 | 3 | 430 | 211 | 613 | 1.57e-94 | 301 |
| MS.gene35804.t1 | AT4G17710 | 38.173 | 427 | 199 | 14 | 12 | 430 | 178 | 547 | 4.48e-80 | 261 |
| MS.gene35804.t1 | AT4G25530 | 35.335 | 433 | 257 | 9 | 2 | 430 | 120 | 533 | 5.57e-78 | 256 |
| MS.gene35804.t1 | AT3G03260 | 34.633 | 436 | 266 | 13 | 5 | 431 | 106 | 531 | 6.19e-70 | 231 |
| MS.gene35804.t1 | AT3G03260 | 34.633 | 436 | 266 | 13 | 5 | 431 | 106 | 531 | 1.81e-68 | 231 |
| MS.gene35804.t1 | AT1G79840 | 38.068 | 352 | 173 | 10 | 4 | 345 | 183 | 499 | 7.73e-68 | 225 |
| MS.gene35804.t1 | AT5G17320 | 30.087 | 462 | 279 | 14 | 5 | 431 | 109 | 561 | 1.70e-54 | 193 |
| MS.gene35804.t1 | AT1G34650 | 30.886 | 463 | 273 | 10 | 5 | 430 | 99 | 551 | 9.09e-54 | 191 |
| MS.gene35804.t1 | AT5G07260 | 26.415 | 424 | 234 | 15 | 2 | 415 | 25 | 380 | 4.07e-28 | 117 |
| MS.gene35804.t1 | AT5G07260 | 26.241 | 423 | 231 | 15 | 2 | 415 | 25 | 375 | 1.17e-27 | 115 |
Find 124 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTTCCCCTAGGTTATA+TGG | 0.155848 | 2.4:-12613467 | MS.gene35804:intron |
| CACTTAAAACCAGCTGGTTT+TGG | 0.238060 | 2.4:+12614264 | None:intergenic |
| ATATTCCTCTTCATTGAGTA+TGG | 0.259965 | 2.4:+12614314 | None:intergenic |
| GGCAGTAGTGGATGTTTCTT+TGG | 0.266653 | 2.4:-12613682 | MS.gene35804:CDS |
| CACACGTGGACAACACTTTC+AGG | 0.288181 | 2.4:-12613046 | MS.gene35804:CDS |
| TACAAGCAGCTTGTTAGTTC+TGG | 0.292041 | 2.4:-12613402 | MS.gene35804:CDS |
| ACAATGCCAGCTGGTCTTCC+TGG | 0.308126 | 2.4:+12612974 | None:intergenic |
| GTCTTTCACATTGTCGATCT+AGG | 0.317831 | 2.4:+12613346 | None:intergenic |
| GAACTCGGCATTGGTGGTTT+CGG | 0.320296 | 2.4:-12614516 | MS.gene35804:CDS |
| TACATATCTCCTCCCATTCC+TGG | 0.333263 | 2.4:+12614486 | None:intergenic |
| GCAACCAGAAGGCCTTCTTC+TGG | 0.341248 | 2.4:+12613629 | None:intergenic |
| GTGCTATCAACTGGGGTGGC+AGG | 0.373210 | 2.4:-12613961 | MS.gene35804:CDS |
| CACTGGCTTTCCTACGTACT+TGG | 0.377299 | 2.4:+12614587 | None:intergenic |
| GTTAGTTCTGGACATGCATT+TGG | 0.380690 | 2.4:-12613390 | MS.gene35804:CDS |
| CTGGATCTGGCAGAAGGACT+AGG | 0.382500 | 2.4:+12613648 | None:intergenic |
| GAATGTATACCTCTTCTCTA+AGG | 0.384454 | 2.4:+12615102 | None:intergenic |
| ACACTGGAAGTGCTATCAAC+TGG | 0.386707 | 2.4:-12613970 | MS.gene35804:CDS |
| CTGGGTCATCTACACTCTTA+CGG | 0.388294 | 2.4:+12612993 | None:intergenic |
| ACATACTCTTTCTCCCATCT+TGG | 0.396801 | 2.4:+12613128 | None:intergenic |
| ACTCATTGGAATGGCACAAA+TGG | 0.397042 | 2.4:-12614373 | MS.gene35804:CDS |
| GCAGTTGGTCCACCACAATT+AGG | 0.400312 | 2.4:+12615176 | None:intergenic |
| ATAACCTTTGAGTAGCCATT+TGG | 0.403234 | 2.4:+12613591 | None:intergenic |
| ACTGCTAGCTCAATTATCAT+TGG | 0.404803 | 2.4:+12614411 | None:intergenic |
| AAATTTCCCCTAGGTTATAT+GGG | 0.407762 | 2.4:-12613466 | MS.gene35804:intron |
| CTTTGGTTGCCTACACTTGA+AGG | 0.408059 | 2.4:-12614342 | MS.gene35804:CDS |
| TGGGTCATCTACACTCTTAC+GGG | 0.423400 | 2.4:+12612994 | None:intergenic |
| GCACAGGAGCTGATGATGTA+AGG | 0.441905 | 2.4:-12613024 | MS.gene35804:CDS |
| AGCAACATGCTGATGGAACT+TGG | 0.445791 | 2.4:-12613704 | MS.gene35804:CDS |
| CCTCTAGAACTCGGCATTGG+TGG | 0.447065 | 2.4:-12614522 | MS.gene35804:CDS |
| AGAAGGCCTTCTTCTGGATC+TGG | 0.453379 | 2.4:+12613635 | None:intergenic |
| TGAGCTAGCAGTTGCTGCTA+TGG | 0.464050 | 2.4:-12614400 | MS.gene35804:CDS |
| CTCTCTCTAGTTGGCACAAG+TGG | 0.472336 | 2.4:+12613747 | None:intergenic |
| GGAGGAGATATGTATGGAGC+TGG | 0.474886 | 2.4:-12614477 | MS.gene35804:CDS |
| TCAATGAAGAGGAATATGTT+AGG | 0.476700 | 2.4:-12614308 | MS.gene35804:CDS |
| GGGCGAGGAGGAACCGATGA+AGG | 0.476736 | 2.4:+12614543 | None:intergenic |
| ACAAAATAACTCTCTCTAGT+TGG | 0.477153 | 2.4:+12613738 | None:intergenic |
| TTCGGAGGACAACCAGGAAT+GGG | 0.477190 | 2.4:-12614498 | MS.gene35804:CDS |
| TCTTTCACATTGTCGATCTA+GGG | 0.482839 | 2.4:+12613347 | None:intergenic |
| TCCTACGTACTTGGCAGCAA+TGG | 0.502677 | 2.4:+12614596 | None:intergenic |
| CGCCCTCTAGAACTCGGCAT+TGG | 0.503902 | 2.4:-12614525 | MS.gene35804:CDS |
| CACTGGAAGTGCTATCAACT+GGG | 0.506183 | 2.4:-12613969 | MS.gene35804:CDS |
| AGATCCAGAAGAAGGCCTTC+TGG | 0.506911 | 2.4:-12613633 | MS.gene35804:CDS |
| GGCGAGGAGGAACCGATGAA+GGG | 0.507726 | 2.4:+12614544 | None:intergenic |
| CAATGCCAGCTGGTCTTCCT+GGG | 0.508862 | 2.4:+12612975 | None:intergenic |
| CTCATTGGAATGGCACAAAT+GGG | 0.511283 | 2.4:-12614372 | MS.gene35804:CDS |
| CAGAGAAAACTGTGGACCAT+TGG | 0.512102 | 2.4:+12614013 | None:intergenic |
| TTAATTCAAGAAATGCCAAA+TGG | 0.513645 | 2.4:-12613606 | MS.gene35804:CDS |
| TTTCGGAGGACAACCAGGAA+TGG | 0.514423 | 2.4:-12614499 | MS.gene35804:CDS |
| TGCTATCAACTGGGGTGGCA+GGG | 0.518257 | 2.4:-12613960 | MS.gene35804:CDS |
| GCTGCTATGGAGGAACTCAT+TGG | 0.520147 | 2.4:-12614387 | MS.gene35804:CDS |
| TTGTGGTTTATAAGAACCAA+TGG | 0.522609 | 2.4:-12614029 | MS.gene35804:intron |
| GCTTCACACTTAAAACCAGC+TGG | 0.523425 | 2.4:+12614258 | None:intergenic |
| TCCACTACTCTCCCCTTCAT+CGG | 0.525289 | 2.4:-12614556 | MS.gene35804:CDS |
| TGTGGGAATGTTTGTTGCCA+TGG | 0.531917 | 2.4:+12613314 | None:intergenic |
| GTATACCTCTTCTCTAAGGC+GGG | 0.534397 | 2.4:+12615106 | None:intergenic |
| CACAAATGGGTGATCCACTT+TGG | 0.540052 | 2.4:-12614359 | MS.gene35804:CDS |
| GCGAGGAGGAACCGATGAAG+GGG | 0.541185 | 2.4:+12614545 | None:intergenic |
| GACATTTCTCCGATGGCAGT+TGG | 0.544696 | 2.4:+12615161 | None:intergenic |
| AAATTCCCGCCTTAGAGAAG+AGG | 0.547209 | 2.4:-12615111 | MS.gene35804:intron |
| CTAGTTGGCACAAGTGGTGA+AGG | 0.548358 | 2.4:+12613753 | None:intergenic |
| GCTTCTTGTCCTAATTGTGG+TGG | 0.548941 | 2.4:-12615185 | MS.gene35804:CDS |
| CTCGGCATTGGTGGTTTCGG+AGG | 0.549851 | 2.4:-12614513 | MS.gene35804:CDS |
| GGAATGGGAGGAGATATGTA+TGG | 0.550014 | 2.4:-12614483 | MS.gene35804:CDS |
| CCACCAATGCCGAGTTCTAG+AGG | 0.555033 | 2.4:+12614522 | None:intergenic |
| ATCAAACGACATTTCTCCGA+TGG | 0.559536 | 2.4:+12615154 | None:intergenic |
| CTTCTGCCAGATCCAGAAGA+AGG | 0.560942 | 2.4:-12613641 | MS.gene35804:CDS |
| CTTCTTCTGGATCTGGCAGA+AGG | 0.561436 | 2.4:+12613642 | None:intergenic |
| GGAATTGGTCCAAAACCAGC+TGG | 0.564202 | 2.4:-12614273 | MS.gene35804:CDS |
| TATTGTAAGCAACATGCTGA+TGG | 0.566221 | 2.4:-12613711 | MS.gene35804:CDS |
| ATGTGCATAAGCTTCTGTGC+TGG | 0.567127 | 2.4:-12613088 | MS.gene35804:CDS |
| ATGGGTTGAGCATGTTGAAG+TGG | 0.567383 | 2.4:-12613448 | MS.gene35804:CDS |
| TAGTGATAACAAACCAAGAT+GGG | 0.567631 | 2.4:-12613141 | MS.gene35804:CDS |
| TGGATCTGGCAGAAGGACTA+GGG | 0.567829 | 2.4:+12613649 | None:intergenic |
| TCTTGAATTAAGCAACCAGA+AGG | 0.568304 | 2.4:+12613618 | None:intergenic |
| ATGCCGAGTTCTAGAGGGCG+AGG | 0.568671 | 2.4:+12614528 | None:intergenic |
| ATGCATTTGGTGCAAAACGT+TGG | 0.570053 | 2.4:-12613377 | MS.gene35804:CDS |
| TGTGGTGGACCAACTGCCAT+CGG | 0.570061 | 2.4:-12615170 | MS.gene35804:CDS |
| GGTGGTTTCGGAGGACAACC+AGG | 0.570493 | 2.4:-12614504 | MS.gene35804:CDS |
| GATGACCCAGGAAGACCAGC+TGG | 0.571107 | 2.4:-12612980 | MS.gene35804:CDS |
| GATCTTCTTAGATCAATAAG+TGG | 0.572048 | 2.4:-12614453 | MS.gene35804:CDS |
| TTAGTGATAACAAACCAAGA+TGG | 0.574822 | 2.4:-12613142 | MS.gene35804:intron |
| ATTGGTTTATCAGCTTCAGT+AGG | 0.576989 | 2.4:+12614429 | None:intergenic |
| TAACCTTGTTGAGATTCTCA+TGG | 0.576995 | 2.4:-12614199 | MS.gene35804:CDS |
| CACAGGAGCTGATGATGTAA+GGG | 0.577558 | 2.4:-12613023 | MS.gene35804:CDS |
| GCACTTAGAACAATGCCAGC+TGG | 0.578109 | 2.4:+12612965 | None:intergenic |
| ACCGATGAAGGGGAGAGTAG+TGG | 0.579805 | 2.4:+12614555 | None:intergenic |
| CCTCCTCGCCCTCTAGAACT+CGG | 0.581323 | 2.4:-12614531 | MS.gene35804:CDS |
| AACATTCCCACAGTCGATGT+TGG | 0.581462 | 2.4:-12613303 | MS.gene35804:CDS |
| TGTCCACGTGTGTGCTGTTG+AGG | 0.582831 | 2.4:+12613057 | None:intergenic |
| TGTTGAGATTCTCATGGATG+TGG | 0.587472 | 2.4:-12614193 | MS.gene35804:intron |
| CGTTTGATGAACATCACTTG+AGG | 0.589246 | 2.4:-12615139 | MS.gene35804:CDS |
| AATGCTTCTTGTCCTAATTG+TGG | 0.590261 | 2.4:-12615188 | MS.gene35804:CDS |
| AGTAGTGGATAGCTCACCAC+TGG | 0.592239 | 2.4:+12614570 | None:intergenic |
| GCTAGCAGTTGCTGCTATGG+AGG | 0.593019 | 2.4:-12614397 | MS.gene35804:CDS |
| TGGACAACACTTTCAGGCAC+AGG | 0.595843 | 2.4:-12613040 | MS.gene35804:CDS |
| TGTATACCTCTTCTCTAAGG+CGG | 0.598180 | 2.4:+12615105 | None:intergenic |
| GCAACATGCTGATGGAACTT+GGG | 0.599510 | 2.4:-12613703 | MS.gene35804:CDS |
| ATGGAACCTCCTTCAAGTGT+AGG | 0.599518 | 2.4:+12614333 | None:intergenic |
| AATGCCAAATGGCTACTCAA+AGG | 0.605118 | 2.4:-12613595 | MS.gene35804:intron |
| TGTCTCAAGAGCAATGACAC+TGG | 0.606529 | 2.4:-12613986 | MS.gene35804:CDS |
| ATTCCCACAGTCGATGTTGG+CGG | 0.607641 | 2.4:-12613300 | MS.gene35804:intron |
| GGTACCGCCAACATCGACTG+TGG | 0.611425 | 2.4:+12613296 | None:intergenic |
| CACCAATGCCGAGTTCTAGA+GGG | 0.615823 | 2.4:+12614523 | None:intergenic |
| AGGTTCCATACTCAATGAAG+AGG | 0.621981 | 2.4:-12614319 | MS.gene35804:CDS |
| TATGGAGGAACTCATTGGAA+TGG | 0.622262 | 2.4:-12614382 | MS.gene35804:CDS |
| TGATGGAACTTGGGCAGTAG+TGG | 0.623796 | 2.4:-12613694 | MS.gene35804:CDS |
| GGAAGTGCTATCAACTGGGG+TGG | 0.632566 | 2.4:-12613965 | MS.gene35804:CDS |
| GGAGGACAACCAGGAATGGG+AGG | 0.639321 | 2.4:-12614495 | MS.gene35804:CDS |
| TCAAGTGTAGGCAACCAAAG+TGG | 0.640121 | 2.4:+12614345 | None:intergenic |
| CTACAATGGTGCATTACAAG+TGG | 0.640429 | 2.4:-12613935 | MS.gene35804:intron |
| GTACCGCCAACATCGACTGT+GGG | 0.642719 | 2.4:+12613297 | None:intergenic |
| GTGCCTCAACAGCACACACG+TGG | 0.644853 | 2.4:-12613060 | MS.gene35804:CDS |
| GGGGTGGCAGGGAACTACAA+TGG | 0.649866 | 2.4:-12613949 | MS.gene35804:CDS |
| TGGTTGCCTACACTTGAAGG+AGG | 0.652894 | 2.4:-12614339 | MS.gene35804:CDS |
| AGATGAAAACTCAAGAAGTG+AGG | 0.655242 | 2.4:-12612889 | None:intergenic |
| CATGTTGAAGTGGATGATAG+AGG | 0.665308 | 2.4:-12613438 | MS.gene35804:CDS |
| CATCCATGAGAATCTCAACA+AGG | 0.674971 | 2.4:+12614196 | None:intergenic |
| CGTAAGAGTGTAGATGACCC+AGG | 0.679064 | 2.4:-12612992 | MS.gene35804:CDS |
| GCCATTGCTGCCAAGTACGT+AGG | 0.683580 | 2.4:-12614597 | MS.gene35804:CDS |
| CCGAGTTCTAGAGGGCGAGG+AGG | 0.684847 | 2.4:+12614531 | None:intergenic |
| TGAAAGACTTGCTAGTGCCA+TGG | 0.696212 | 2.4:-12613331 | MS.gene35804:CDS |
| CAAGTACGTAGGAAAGCCAG+TGG | 0.711066 | 2.4:-12614586 | MS.gene35804:CDS |
| GACAATGCCAGAGAAAACTG+TGG | 0.735059 | 2.4:+12614005 | None:intergenic |
| ACTGGAAGTGCTATCAACTG+GGG | 0.765115 | 2.4:-12613968 | MS.gene35804:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAACCTTCTTTAATTT+TGG | - | chr2.4:12613454-12613473 | MS.gene35804:CDS | 15.0% |
| !! | ATTAACACCAAAATTAAAGA+AGG | + | chr2.4:12613464-12613483 | None:intergenic | 20.0% |
| !!! | AAGAAATTCAAAAACTCTTT+TGG | + | chr2.4:12615191-12615210 | None:intergenic | 20.0% |
| !!! | TTTTAAAAAAAATTTCCCCT+AGG | - | chr2.4:12614627-12614646 | MS.gene35804:intron | 20.0% |
| ! | ATCGAAGCCTATATATTTAT+GGG | - | chr2.4:12613177-12613196 | MS.gene35804:intron | 25.0% |
| ! | GATAGAGATAGAATAACAAT+AGG | + | chr2.4:12613403-12613422 | None:intergenic | 25.0% |
| ! | TATGAGATTGAAATGAACAA+TGG | - | chr2.4:12613213-12613232 | MS.gene35804:intron | 25.0% |
| ! | TCATGAAAAATTCCATCAAA+AGG | + | chr2.4:12614920-12614939 | None:intergenic | 25.0% |
| ! | TTAATTCAAGAAATGCCAAA+TGG | - | chr2.4:12614496-12614515 | MS.gene35804:CDS | 25.0% |
| !! | AAATTCAAAAACTCTTTTGG+TGG | + | chr2.4:12615188-12615207 | None:intergenic | 25.0% |
| !! | GATTGATGCGATATTAATTT+TGG | + | chr2.4:12613256-12613275 | None:intergenic | 25.0% |
| !! | GTGTTAATTTTCAGATTGAT+AGG | - | chr2.4:12613476-12613495 | MS.gene35804:intron | 25.0% |
| !!! | AAAGAGTAGTGTTTTTGTAT+TGG | + | chr2.4:12614830-12614849 | None:intergenic | 25.0% |
| !!! | CTTGATTATTTTTCTCTATG+TGG | - | chr2.4:12614587-12614606 | MS.gene35804:CDS | 25.0% |
| !!! | TTTTTTCTTCTTCCTTTTGA+TGG | - | chr2.4:12614905-12614924 | MS.gene35804:intron | 25.0% |
| AAAATTTCCCCTAGGTTATA+TGG | - | chr2.4:12614635-12614654 | MS.gene35804:intron | 30.0% | |
| AAATTTCCCCTAGGTTATAT+GGG | - | chr2.4:12614636-12614655 | MS.gene35804:intron | 30.0% | |
| ACAAAATAACTCTCTCTAGT+TGG | + | chr2.4:12614367-12614386 | None:intergenic | 30.0% | |
| ATATTCCTCTTCATTGAGTA+TGG | + | chr2.4:12613791-12613810 | None:intergenic | 30.0% | |
| CAGAAATTACACCAAGTTTA+TGG | - | chr2.4:12613035-12613054 | MS.gene35804:CDS | 30.0% | |
| GATCGAAGCCTATATATTTA+TGG | - | chr2.4:12613176-12613195 | MS.gene35804:intron | 30.0% | |
| GATCTTCTTAGATCAATAAG+TGG | - | chr2.4:12613649-12613668 | MS.gene35804:CDS | 30.0% | |
| TAAAACATACATCAAGGTCT+TGG | - | chr2.4:12613110-12613129 | MS.gene35804:CDS | 30.0% | |
| TAGTGATAACAAACCAAGAT+GGG | - | chr2.4:12614961-12614980 | MS.gene35804:intron | 30.0% | |
| TCAAACGCCCATAAATATAT+AGG | + | chr2.4:12613187-12613206 | None:intergenic | 30.0% | |
| TCAATGAAGAGGAATATGTT+AGG | - | chr2.4:12613794-12613813 | MS.gene35804:intron | 30.0% | |
| TTAGTGATAACAAACCAAGA+TGG | - | chr2.4:12614960-12614979 | MS.gene35804:intron | 30.0% | |
| TTGTGGTTTATAAGAACCAA+TGG | - | chr2.4:12614073-12614092 | MS.gene35804:intron | 30.0% | |
| ! | TCTCTATGTGGATTAACTAT+AGG | - | chr2.4:12614599-12614618 | MS.gene35804:CDS | 30.0% |
| !!! | ATGTATGTTTTAACTGCGTT+TGG | + | chr2.4:12613102-12613121 | None:intergenic | 30.0% |
| !!! | TGACACTATTTTTGTTCTTG+TGG | - | chr2.4:12614056-12614075 | MS.gene35804:intron | 30.0% |
| AATGCTTCTTGTCCTAATTG+TGG | - | chr2.4:12612914-12612933 | MS.gene35804:CDS | 35.0% | |
| ACTGCTAGCTCAATTATCAT+TGG | + | chr2.4:12613694-12613713 | None:intergenic | 35.0% | |
| ATAACCTTTGAGTAGCCATT+TGG | + | chr2.4:12614514-12614533 | None:intergenic | 35.0% | |
| CGCAGTTAAAACATACATCA+AGG | - | chr2.4:12613104-12613123 | MS.gene35804:CDS | 35.0% | |
| GAATGTATACCTCTTCTCTA+AGG | + | chr2.4:12613003-12613022 | None:intergenic | 35.0% | |
| TAACCTTGTTGAGATTCTCA+TGG | - | chr2.4:12613903-12613922 | MS.gene35804:intron | 35.0% | |
| TATCAATCGCACCATAAACT+TGG | + | chr2.4:12613049-12613068 | None:intergenic | 35.0% | |
| TATTGTAAGCAACATGCTGA+TGG | - | chr2.4:12614391-12614410 | MS.gene35804:CDS | 35.0% | |
| TCTTGAATTAAGCAACCAGA+AGG | + | chr2.4:12614487-12614506 | None:intergenic | 35.0% | |
| TCTTTCACATTGTCGATCTA+GGG | + | chr2.4:12614758-12614777 | None:intergenic | 35.0% | |
| ! | AACACTACTCTTTCTCGTTT+TGG | - | chr2.4:12614837-12614856 | MS.gene35804:intron | 35.0% |
| ! | ATTGGTTTATCAGCTTCAGT+AGG | + | chr2.4:12613676-12613695 | None:intergenic | 35.0% |
| ! | TATGTTAGGTCTTTTCCTAG+AGG | - | chr2.4:12613808-12613827 | MS.gene35804:intron | 35.0% |
| !! | CTAGAGAGAGTTATTTTGTG+AGG | - | chr2.4:12614368-12614387 | MS.gene35804:CDS | 35.0% |
| !! | TAAGTGCTGCAACTTCTTTT+TGG | - | chr2.4:12615153-12615172 | MS.gene35804:CDS | 35.0% |
| !! | TGCGATATTAATTTTGGTCG+AGG | + | chr2.4:12613250-12613269 | None:intergenic | 35.0% |
| AATGCCAAATGGCTACTCAA+AGG | - | chr2.4:12614507-12614526 | MS.gene35804:CDS | 40.0% | |
| ACATACTCTTTCTCCCATCT+TGG | + | chr2.4:12614977-12614996 | None:intergenic | 40.0% | |
| ACTCATTGGAATGGCACAAA+TGG | - | chr2.4:12613729-12613748 | MS.gene35804:CDS | 40.0% | |
| AGGTTCCATACTCAATGAAG+AGG | - | chr2.4:12613783-12613802 | MS.gene35804:intron | 40.0% | |
| ATCAAACGACATTTCTCCGA+TGG | + | chr2.4:12612951-12612970 | None:intergenic | 40.0% | |
| ATGCTCAACCCATATAACCT+AGG | + | chr2.4:12614647-12614666 | None:intergenic | 40.0% | |
| CATCCATGAGAATCTCAACA+AGG | + | chr2.4:12613909-12613928 | None:intergenic | 40.0% | |
| CATGTTGAAGTGGATGATAG+AGG | - | chr2.4:12614664-12614683 | MS.gene35804:intron | 40.0% | |
| CGTTTGATGAACATCACTTG+AGG | - | chr2.4:12612963-12612982 | MS.gene35804:CDS | 40.0% | |
| CTACAATGGTGCATTACAAG+TGG | - | chr2.4:12614167-12614186 | MS.gene35804:intron | 40.0% | |
| CTCATTGGAATGGCACAAAT+GGG | - | chr2.4:12613730-12613749 | MS.gene35804:CDS | 40.0% | |
| GTCTTTCACATTGTCGATCT+AGG | + | chr2.4:12614759-12614778 | None:intergenic | 40.0% | |
| TATGGAGGAACTCATTGGAA+TGG | - | chr2.4:12613720-12613739 | MS.gene35804:CDS | 40.0% | |
| TGCTCAACCCATATAACCTA+GGG | + | chr2.4:12614646-12614665 | None:intergenic | 40.0% | |
| TGTTGAGATTCTCATGGATG+TGG | - | chr2.4:12613909-12613928 | MS.gene35804:intron | 40.0% | |
| ! | AGGTCTTTTCCTAGAGGAAT+TGG | - | chr2.4:12613814-12613833 | MS.gene35804:intron | 40.0% |
| ! | TGTATACCTCTTCTCTAAGG+CGG | + | chr2.4:12613000-12613019 | None:intergenic | 40.0% |
| !! | AAAAACTCTTTTGGTGGCAC+TGG | + | chr2.4:12615182-12615201 | None:intergenic | 40.0% |
| !! | ATGCATTTGGTGCAAAACGT+TGG | - | chr2.4:12614725-12614744 | MS.gene35804:intron | 40.0% |
| !! | CACTTAAAACCAGCTGGTTT+TGG | + | chr2.4:12613841-12613860 | None:intergenic | 40.0% |
| !! | GTTAGTTCTGGACATGCATT+TGG | - | chr2.4:12614712-12614731 | MS.gene35804:intron | 40.0% |
| !! | TACAAGCAGCTTGTTAGTTC+TGG | - | chr2.4:12614700-12614719 | MS.gene35804:intron | 40.0% |
| AAATTCCCGCCTTAGAGAAG+AGG | - | chr2.4:12612991-12613010 | MS.gene35804:CDS | 45.0% | |
| AACATTCCCACAGTCGATGT+TGG | - | chr2.4:12614799-12614818 | MS.gene35804:intron | 45.0% | |
| AGCAACATGCTGATGGAACT+TGG | - | chr2.4:12614398-12614417 | MS.gene35804:CDS | 45.0% | |
| ATGGAACCTCCTTCAAGTGT+AGG | + | chr2.4:12613772-12613791 | None:intergenic | 45.0% | |
| ATGTGCATAAGCTTCTGTGC+TGG | - | chr2.4:12615014-12615033 | MS.gene35804:intron | 45.0% | |
| CACAAATGGGTGATCCACTT+TGG | - | chr2.4:12613743-12613762 | MS.gene35804:CDS | 45.0% | |
| CAGAGAAAACTGTGGACCAT+TGG | + | chr2.4:12614092-12614111 | None:intergenic | 45.0% | |
| CTGGGTCATCTACACTCTTA+CGG | + | chr2.4:12615112-12615131 | None:intergenic | 45.0% | |
| CTTTGGTTGCCTACACTTGA+AGG | - | chr2.4:12613760-12613779 | MS.gene35804:CDS | 45.0% | |
| GACAATGCCAGAGAAAACTG+TGG | + | chr2.4:12614100-12614119 | None:intergenic | 45.0% | |
| GCAACATGCTGATGGAACTT+GGG | - | chr2.4:12614399-12614418 | MS.gene35804:CDS | 45.0% | |
| GCTCAACCCATATAACCTAG+GGG | + | chr2.4:12614645-12614664 | None:intergenic | 45.0% | |
| GCTTCACACTTAAAACCAGC+TGG | + | chr2.4:12613847-12613866 | None:intergenic | 45.0% | |
| GCTTCTTGTCCTAATTGTGG+TGG | - | chr2.4:12612917-12612936 | MS.gene35804:CDS | 45.0% | |
| GGAATGGGAGGAGATATGTA+TGG | - | chr2.4:12613619-12613638 | MS.gene35804:CDS | 45.0% | |
| TACATATCTCCTCCCATTCC+TGG | + | chr2.4:12613619-12613638 | None:intergenic | 45.0% | |
| TCAAGTGTAGGCAACCAAAG+TGG | + | chr2.4:12613760-12613779 | None:intergenic | 45.0% | |
| TGGGTCATCTACACTCTTAC+GGG | + | chr2.4:12615111-12615130 | None:intergenic | 45.0% | |
| TGTCTCAAGAGCAATGACAC+TGG | - | chr2.4:12614116-12614135 | MS.gene35804:intron | 45.0% | |
| ! | ATGGGTTGAGCATGTTGAAG+TGG | - | chr2.4:12614654-12614673 | MS.gene35804:intron | 45.0% |
| ! | CAATGGTCCACAGTTTTCTC+TGG | - | chr2.4:12614090-12614109 | MS.gene35804:intron | 45.0% |
| ! | CACAGGAGCTGATGATGTAA+GGG | - | chr2.4:12615079-12615098 | MS.gene35804:intron | 45.0% |
| ! | TGTGGGAATGTTTGTTGCCA+TGG | + | chr2.4:12614791-12614810 | None:intergenic | 45.0% |
| !! | ACACTGGAAGTGCTATCAAC+TGG | - | chr2.4:12614132-12614151 | MS.gene35804:intron | 45.0% |
| !! | ACTGGAAGTGCTATCAACTG+GGG | - | chr2.4:12614134-12614153 | MS.gene35804:intron | 45.0% |
| !! | CACTGGAAGTGCTATCAACT+GGG | - | chr2.4:12614133-12614152 | MS.gene35804:intron | 45.0% |
| !! | GGCAGTAGTGGATGTTTCTT+TGG | - | chr2.4:12614420-12614439 | MS.gene35804:CDS | 45.0% |
| !! | GTATACCTCTTCTCTAAGGC+GGG | + | chr2.4:12612999-12613018 | None:intergenic | 45.0% |
| !! | TGAAAGACTTGCTAGTGCCA+TGG | - | chr2.4:12614771-12614790 | MS.gene35804:intron | 45.0% |
| !!! | GGTTTTGGACCAATTCCTCT+AGG | + | chr2.4:12613826-12613845 | None:intergenic | 45.0% |
| AGAAGGCCTTCTTCTGGATC+TGG | + | chr2.4:12614470-12614489 | None:intergenic | 50.0% | |
| AGATCCAGAAGAAGGCCTTC+TGG | - | chr2.4:12614469-12614488 | MS.gene35804:CDS | 50.0% | |
| AGGCTTCGATCCCCTACATT+AGG | + | chr2.4:12613167-12613186 | None:intergenic | 50.0% | |
| ATTCCCACAGTCGATGTTGG+CGG | - | chr2.4:12614802-12614821 | MS.gene35804:intron | 50.0% | |
| CAAGTACGTAGGAAAGCCAG+TGG | - | chr2.4:12613516-12613535 | MS.gene35804:intron | 50.0% | |
| CACACGTGGACAACACTTTC+AGG | - | chr2.4:12615056-12615075 | MS.gene35804:intron | 50.0% | |
| CTAGTTGGCACAAGTGGTGA+AGG | + | chr2.4:12614352-12614371 | None:intergenic | 50.0% | |
| CTCTCTCTAGTTGGCACAAG+TGG | + | chr2.4:12614358-12614377 | None:intergenic | 50.0% | |
| CTTCTGCCAGATCCAGAAGA+AGG | - | chr2.4:12614461-12614480 | MS.gene35804:CDS | 50.0% | |
| CTTCTTCTGGATCTGGCAGA+AGG | + | chr2.4:12614463-12614482 | None:intergenic | 50.0% | |
| GACATTTCTCCGATGGCAGT+TGG | + | chr2.4:12612944-12612963 | None:intergenic | 50.0% | |
| GATCCCCTACAACAGTTGCA+CGG | - | chr2.4:12613132-12613151 | MS.gene35804:CDS | 50.0% | |
| GCACTTAGAACAATGCCAGC+TGG | + | chr2.4:12615140-12615159 | None:intergenic | 50.0% | |
| GCAGTTGGTCCACCACAATT+AGG | + | chr2.4:12612929-12612948 | None:intergenic | 50.0% | |
| GCTGCTATGGAGGAACTCAT+TGG | - | chr2.4:12613715-12613734 | MS.gene35804:CDS | 50.0% | |
| GGAATTGGTCCAAAACCAGC+TGG | - | chr2.4:12613829-12613848 | MS.gene35804:intron | 50.0% | |
| GGAGGAGATATGTATGGAGC+TGG | - | chr2.4:12613625-12613644 | MS.gene35804:CDS | 50.0% | |
| GGCTTCGATCCCCTACATTA+GGG | + | chr2.4:12613166-12613185 | None:intergenic | 50.0% | |
| TCCACTACTCTCCCCTTCAT+CGG | - | chr2.4:12613546-12613565 | MS.gene35804:intron | 50.0% | |
| TCCTACGTACTTGGCAGCAA+TGG | + | chr2.4:12613509-12613528 | None:intergenic | 50.0% | |
| TGAGCTAGCAGTTGCTGCTA+TGG | - | chr2.4:12613702-12613721 | MS.gene35804:CDS | 50.0% | |
| TGATGGAACTTGGGCAGTAG+TGG | - | chr2.4:12614408-12614427 | MS.gene35804:CDS | 50.0% | |
| TGCACCGTGCAACTGTTGTA+GGG | + | chr2.4:12613139-12613158 | None:intergenic | 50.0% | |
| TGGACAACACTTTCAGGCAC+AGG | - | chr2.4:12615062-12615081 | MS.gene35804:intron | 50.0% | |
| TGGATCTGGCAGAAGGACTA+GGG | + | chr2.4:12614456-12614475 | None:intergenic | 50.0% | |
| TGGTTGCCTACACTTGAAGG+AGG | - | chr2.4:12613763-12613782 | MS.gene35804:CDS | 50.0% | |
| TTCGGAGGACAACCAGGAAT+GGG | - | chr2.4:12613604-12613623 | MS.gene35804:CDS | 50.0% | |
| TTTCGGAGGACAACCAGGAA+TGG | - | chr2.4:12613603-12613622 | MS.gene35804:CDS | 50.0% | |
| ! | CGTAAGAGTGTAGATGACCC+AGG | - | chr2.4:12615110-12615129 | MS.gene35804:intron | 50.0% |
| ! | GCACAGGAGCTGATGATGTA+AGG | - | chr2.4:12615078-12615097 | MS.gene35804:intron | 50.0% |
| !! | AGTAGTGGATAGCTCACCAC+TGG | + | chr2.4:12613535-12613554 | None:intergenic | 50.0% |
| !! | CACCAATGCCGAGTTCTAGA+GGG | + | chr2.4:12613582-12613601 | None:intergenic | 50.0% |
| !! | CACTGGCTTTCCTACGTACT+TGG | + | chr2.4:12613518-12613537 | None:intergenic | 50.0% |
| !! | GAACTCGGCATTGGTGGTTT+CGG | - | chr2.4:12613586-12613605 | MS.gene35804:intron | 50.0% |
| ACCGATGAAGGGGAGAGTAG+TGG | + | chr2.4:12613550-12613569 | None:intergenic | 55.0% | |
| CTGCACCGTGCAACTGTTGT+AGG | + | chr2.4:12613140-12613159 | None:intergenic | 55.0% | |
| CTGGATCTGGCAGAAGGACT+AGG | + | chr2.4:12614457-12614476 | None:intergenic | 55.0% | |
| GCAACCAGAAGGCCTTCTTC+TGG | + | chr2.4:12614476-12614495 | None:intergenic | 55.0% | |
| GCACCGTGCAACTGTTGTAG+GGG | + | chr2.4:12613138-12613157 | None:intergenic | 55.0% | |
| GCCATTGCTGCCAAGTACGT+AGG | - | chr2.4:12613505-12613524 | MS.gene35804:intron | 55.0% | |
| GCTAGCAGTTGCTGCTATGG+AGG | - | chr2.4:12613705-12613724 | MS.gene35804:CDS | 55.0% | |
| GGTGCAGCGACCCTAATGTA+GGG | - | chr2.4:12613153-12613172 | MS.gene35804:intron | 55.0% | |
| GTGCAGCGACCCTAATGTAG+GGG | - | chr2.4:12613154-12613173 | MS.gene35804:intron | 55.0% | |
| TGCTATCAACTGGGGTGGCA+GGG | - | chr2.4:12614142-12614161 | MS.gene35804:intron | 55.0% | |
| ! | CCACCAATGCCGAGTTCTAG+AGG | + | chr2.4:12613583-12613602 | None:intergenic | 55.0% |
| ! | GTACCGCCAACATCGACTGT+GGG | + | chr2.4:12614808-12614827 | None:intergenic | 55.0% |
| ! | TGTCCACGTGTGTGCTGTTG+AGG | + | chr2.4:12615048-12615067 | None:intergenic | 55.0% |
| !! | ACAATGCCAGCTGGTCTTCC+TGG | + | chr2.4:12615131-12615150 | None:intergenic | 55.0% |
| !! | CAATGCCAGCTGGTCTTCCT+GGG | + | chr2.4:12615130-12615149 | None:intergenic | 55.0% |
| !! | CCTCTAGAACTCGGCATTGG+TGG | - | chr2.4:12613580-12613599 | MS.gene35804:intron | 55.0% |
| !! | GGAAGTGCTATCAACTGGGG+TGG | - | chr2.4:12614137-12614156 | MS.gene35804:intron | 55.0% |
| !! | TGTGGTGGACCAACTGCCAT+CGG | - | chr2.4:12612932-12612951 | MS.gene35804:CDS | 55.0% |
| CGGTGCAGCGACCCTAATGT+AGG | - | chr2.4:12613152-12613171 | MS.gene35804:intron | 60.0% | |
| GATGACCCAGGAAGACCAGC+TGG | - | chr2.4:12615122-12615141 | MS.gene35804:CDS | 60.0% | |
| GCGAGGAGGAACCGATGAAG+GGG | + | chr2.4:12613560-12613579 | None:intergenic | 60.0% | |
| GGAGGACAACCAGGAATGGG+AGG | - | chr2.4:12613607-12613626 | MS.gene35804:CDS | 60.0% | |
| GGCGAGGAGGAACCGATGAA+GGG | + | chr2.4:12613561-12613580 | None:intergenic | 60.0% | |
| GGGGTGGCAGGGAACTACAA+TGG | - | chr2.4:12614153-12614172 | MS.gene35804:intron | 60.0% | |
| GGTGGTTTCGGAGGACAACC+AGG | - | chr2.4:12613598-12613617 | MS.gene35804:CDS | 60.0% | |
| GTGCCTCAACAGCACACACG+TGG | - | chr2.4:12615042-12615061 | MS.gene35804:intron | 60.0% | |
| GTGCTATCAACTGGGGTGGC+AGG | - | chr2.4:12614141-12614160 | MS.gene35804:intron | 60.0% | |
| ! | GGTACCGCCAACATCGACTG+TGG | + | chr2.4:12614809-12614828 | None:intergenic | 60.0% |
| !! | ATGCCGAGTTCTAGAGGGCG+AGG | + | chr2.4:12613577-12613596 | None:intergenic | 60.0% |
| !! | CCTCCTCGCCCTCTAGAACT+CGG | - | chr2.4:12613571-12613590 | MS.gene35804:intron | 60.0% |
| !! | CGCCCTCTAGAACTCGGCAT+TGG | - | chr2.4:12613577-12613596 | MS.gene35804:intron | 60.0% |
| !! | CTCGGCATTGGTGGTTTCGG+AGG | - | chr2.4:12613589-12613608 | MS.gene35804:intron | 60.0% |
| GGGCGAGGAGGAACCGATGA+AGG | + | chr2.4:12613562-12613581 | None:intergenic | 65.0% | |
| !! | CCGAGTTCTAGAGGGCGAGG+AGG | + | chr2.4:12613574-12613593 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 12612890 | 12615234 | 12612890 | ID=MS.gene35804 |
| chr2.4 | mRNA | 12612890 | 12615234 | 12612890 | ID=MS.gene35804.t1;Parent=MS.gene35804 |
| chr2.4 | exon | 12615112 | 12615234 | 12615112 | ID=MS.gene35804.t1.exon1;Parent=MS.gene35804.t1 |
| chr2.4 | CDS | 12615112 | 12615234 | 12615112 | ID=cds.MS.gene35804.t1;Parent=MS.gene35804.t1 |
| chr2.4 | exon | 12614194 | 12614634 | 12614194 | ID=MS.gene35804.t1.exon2;Parent=MS.gene35804.t1 |
| chr2.4 | CDS | 12614194 | 12614634 | 12614194 | ID=cds.MS.gene35804.t1;Parent=MS.gene35804.t1 |
| chr2.4 | exon | 12613936 | 12614037 | 12613936 | ID=MS.gene35804.t1.exon3;Parent=MS.gene35804.t1 |
| chr2.4 | CDS | 12613936 | 12614037 | 12613936 | ID=cds.MS.gene35804.t1;Parent=MS.gene35804.t1 |
| chr2.4 | exon | 12613596 | 12613796 | 12613596 | ID=MS.gene35804.t1.exon4;Parent=MS.gene35804.t1 |
| chr2.4 | CDS | 12613596 | 12613796 | 12613596 | ID=cds.MS.gene35804.t1;Parent=MS.gene35804.t1 |
| chr2.4 | exon | 12613301 | 12613475 | 12613301 | ID=MS.gene35804.t1.exon5;Parent=MS.gene35804.t1 |
| chr2.4 | CDS | 12613301 | 12613475 | 12613301 | ID=cds.MS.gene35804.t1;Parent=MS.gene35804.t1 |
| chr2.4 | exon | 12612890 | 12613160 | 12612890 | ID=MS.gene35804.t1.exon6;Parent=MS.gene35804.t1 |
| chr2.4 | CDS | 12612890 | 12613160 | 12612890 | ID=cds.MS.gene35804.t1;Parent=MS.gene35804.t1 |
| Gene Sequence |
| Protein sequence |
