Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37106.t1 | KEH25262.1 | 97.8 | 685 | 15 | 0 | 1 | 685 | 1 | 685 | 0.00E+00 | 1403.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37106.t1 | D4AZ24 | 28.5 | 576 | 363 | 20 | 122 | 662 | 335 | 896 | 3.2e-42 | 174.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37106.t1 | A0A072U6F9 | 97.8 | 685 | 15 | 0 | 1 | 685 | 1 | 685 | 0.0e+00 | 1403.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene37106 | 0.809157 | 2.17E-50 | -1.69E-46 |
| MS.gene049227 | MS.gene37106 | 0.829964 | 3.83E-55 | -1.69E-46 |
| MS.gene049350 | MS.gene37106 | 0.836186 | 1.08E-56 | -1.69E-46 |
| MS.gene049368 | MS.gene37106 | 0.800307 | 1.53E-48 | -1.69E-46 |
| MS.gene049499 | MS.gene37106 | 0.817402 | 3.36E-52 | -1.69E-46 |
| MS.gene049711 | MS.gene37106 | 0.801997 | 6.91E-49 | -1.69E-46 |
| MS.gene049807 | MS.gene37106 | 0.847851 | 8.90E-60 | -1.69E-46 |
| MS.gene050224 | MS.gene37106 | 0.815763 | 7.82E-52 | -1.69E-46 |
| MS.gene050238 | MS.gene37106 | 0.808153 | 3.56E-50 | -1.69E-46 |
| MS.gene050414 | MS.gene37106 | 0.838679 | 2.49E-57 | -1.69E-46 |
| MS.gene050646 | MS.gene37106 | 0.807758 | 4.32E-50 | -1.69E-46 |
| MS.gene050945 | MS.gene37106 | 0.832426 | 9.52E-56 | -1.69E-46 |
| MS.gene051234 | MS.gene37106 | 0.836296 | 1.02E-56 | -1.69E-46 |
| MS.gene051279 | MS.gene37106 | 0.807922 | 3.99E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene37106 | 0.800303 | 1.54E-48 | -1.69E-46 |
| MS.gene051724 | MS.gene37106 | 0.801136 | 1.04E-48 | -1.69E-46 |
| MS.gene052016 | MS.gene37106 | 0.814982 | 1.17E-51 | -1.69E-46 |
| MS.gene052072 | MS.gene37106 | 0.835733 | 1.41E-56 | -1.69E-46 |
| MS.gene052239 | MS.gene37106 | -0.801552 | 8.53E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene37106 | 0.838368 | 3.00E-57 | -1.69E-46 |
| MS.gene052463 | MS.gene37106 | 0.811694 | 6.16E-51 | -1.69E-46 |
| MS.gene052514 | MS.gene37106 | 0.806758 | 7.04E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene37106 | 0.81407 | 1.86E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene37106 | 0.826527 | 2.58E-54 | -1.69E-46 |
| MS.gene052628 | MS.gene37106 | 0.818141 | 2.29E-52 | -1.69E-46 |
| MS.gene052630 | MS.gene37106 | 0.829704 | 4.44E-55 | -1.69E-46 |
| MS.gene052793 | MS.gene37106 | 0.82205 | 2.91E-53 | -1.69E-46 |
| MS.gene053079 | MS.gene37106 | 0.813633 | 2.32E-51 | -1.69E-46 |
| MS.gene053143 | MS.gene37106 | 0.847245 | 1.31E-59 | -1.69E-46 |
| MS.gene053144 | MS.gene37106 | 0.802568 | 5.27E-49 | -1.69E-46 |
| MS.gene053542 | MS.gene37106 | 0.800505 | 1.40E-48 | -1.69E-46 |
| MS.gene053581 | MS.gene37106 | 0.810512 | 1.11E-50 | -1.69E-46 |
| MS.gene05364 | MS.gene37106 | 0.812655 | 3.80E-51 | -1.69E-46 |
| MS.gene054142 | MS.gene37106 | 0.817833 | 2.69E-52 | -1.69E-46 |
| MS.gene054178 | MS.gene37106 | 0.811591 | 6.48E-51 | -1.69E-46 |
| MS.gene055220 | MS.gene37106 | 0.804118 | 2.52E-49 | -1.69E-46 |
| MS.gene055221 | MS.gene37106 | 0.822672 | 2.09E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene37106 | 0.801109 | 1.05E-48 | -1.69E-46 |
| MS.gene055891 | MS.gene37106 | 0.805032 | 1.62E-49 | -1.69E-46 |
| MS.gene056308 | MS.gene37106 | 0.828757 | 7.53E-55 | -1.69E-46 |
| MS.gene056578 | MS.gene37106 | 0.824445 | 8.04E-54 | -1.69E-46 |
| MS.gene056677 | MS.gene37106 | 0.814972 | 1.17E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene37106 | 0.801619 | 8.27E-49 | -1.69E-46 |
| MS.gene057082 | MS.gene37106 | 0.81495 | 1.19E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene37106 | 0.826812 | 2.21E-54 | -1.69E-46 |
| MS.gene058149 | MS.gene37106 | 0.802684 | 4.99E-49 | -1.69E-46 |
| MS.gene058330 | MS.gene37106 | 0.818309 | 2.10E-52 | -1.69E-46 |
| MS.gene058492 | MS.gene37106 | 0.839977 | 1.15E-57 | -1.69E-46 |
| MS.gene058781 | MS.gene37106 | 0.805123 | 1.55E-49 | -1.69E-46 |
| MS.gene058852 | MS.gene37106 | 0.8358 | 1.36E-56 | -1.69E-46 |
| MS.gene059778 | MS.gene37106 | 0.851918 | 6.49E-61 | -1.69E-46 |
| MS.gene059949 | MS.gene37106 | 0.810215 | 1.29E-50 | -1.69E-46 |
| MS.gene060933 | MS.gene37106 | 0.810227 | 1.28E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene37106 | 0.815407 | 9.39E-52 | -1.69E-46 |
| MS.gene061006 | MS.gene37106 | 0.804181 | 2.44E-49 | -1.69E-46 |
| MS.gene061100 | MS.gene37106 | 0.888261 | 6.91E-73 | -1.69E-46 |
| MS.gene061160 | MS.gene37106 | 0.86776 | 1.08E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37106.t1 | MTR_6g016795 | 97.810 | 685 | 15 | 0 | 1 | 685 | 1 | 685 | 0.0 | 1385 |
| MS.gene37106.t1 | MTR_6g016785 | 76.176 | 680 | 159 | 3 | 8 | 685 | 71 | 749 | 0.0 | 1096 |
| MS.gene37106.t1 | MTR_6g016800 | 78.346 | 665 | 141 | 2 | 6 | 668 | 5 | 668 | 0.0 | 1047 |
| MS.gene37106.t1 | MTR_6g016820 | 76.269 | 670 | 154 | 4 | 1 | 666 | 1 | 669 | 0.0 | 960 |
| MS.gene37106.t1 | MTR_7g013170 | 68.453 | 653 | 202 | 3 | 15 | 665 | 13 | 663 | 0.0 | 932 |
| MS.gene37106.t1 | MTR_6g016790 | 70.000 | 660 | 194 | 3 | 8 | 665 | 2 | 659 | 0.0 | 924 |
| MS.gene37106.t1 | MTR_6g016845 | 71.299 | 662 | 183 | 5 | 8 | 665 | 20 | 678 | 0.0 | 902 |
| MS.gene37106.t1 | MTR_7g013810 | 68.085 | 658 | 206 | 3 | 10 | 665 | 5 | 660 | 0.0 | 899 |
| MS.gene37106.t1 | MTR_6g016810 | 68.845 | 658 | 201 | 3 | 10 | 665 | 4 | 659 | 0.0 | 897 |
| MS.gene37106.t1 | MTR_6g016840 | 68.148 | 675 | 205 | 6 | 1 | 666 | 1 | 674 | 0.0 | 888 |
| MS.gene37106.t1 | MTR_7g028445 | 66.718 | 646 | 170 | 4 | 6 | 647 | 7 | 611 | 0.0 | 815 |
| MS.gene37106.t1 | MTR_4g036905 | 66.718 | 646 | 170 | 4 | 6 | 647 | 7 | 611 | 0.0 | 815 |
| MS.gene37106.t1 | MTR_6g016860 | 71.206 | 514 | 146 | 1 | 125 | 636 | 1 | 514 | 0.0 | 759 |
| MS.gene37106.t1 | MTR_6g016855 | 78.075 | 374 | 69 | 2 | 292 | 664 | 2 | 363 | 0.0 | 575 |
| MS.gene37106.t1 | MTR_1g079270 | 66.462 | 325 | 104 | 3 | 229 | 551 | 47 | 368 | 2.33e-145 | 428 |
| MS.gene37106.t1 | MTR_6g037090 | 65.461 | 304 | 73 | 2 | 130 | 433 | 39 | 310 | 1.75e-132 | 393 |
| MS.gene37106.t1 | MTR_1g079320 | 44.606 | 343 | 100 | 8 | 353 | 659 | 2 | 290 | 4.29e-80 | 256 |
| MS.gene37106.t1 | MTR_7g112730 | 55.274 | 237 | 67 | 5 | 416 | 652 | 90 | 287 | 1.34e-74 | 242 |
| MS.gene37106.t1 | MTR_6g007703 | 51.852 | 162 | 34 | 3 | 424 | 541 | 4 | 165 | 1.06e-40 | 146 |
| MS.gene37106.t1 | MTR_6g007717 | 72.917 | 96 | 25 | 1 | 264 | 359 | 14 | 108 | 2.84e-35 | 132 |
| MS.gene37106.t1 | MTR_6g007717 | 56.322 | 87 | 25 | 2 | 541 | 627 | 123 | 196 | 1.91e-21 | 93.2 |
| MS.gene37106.t1 | MTR_6g007713 | 53.704 | 108 | 24 | 3 | 470 | 577 | 3 | 84 | 2.62e-27 | 106 |
| MS.gene37106.t1 | MTR_6g007700 | 85.000 | 60 | 8 | 1 | 292 | 351 | 6 | 64 | 4.84e-26 | 104 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37106.t1 | AT5G15870 | 67.382 | 699 | 206 | 7 | 6 | 685 | 50 | 745 | 0.0 | 947 |
| MS.gene37106.t1 | AT1G18310 | 62.936 | 688 | 189 | 8 | 4 | 665 | 1 | 648 | 0.0 | 852 |
Find 144 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGATCATCATTATCATTT+AGG | 0.178028 | 6.2:-12383888 | MS.gene37106:CDS |
| ATGATACTGGTGCTGATTTC+GGG | 0.206958 | 6.2:-12383923 | MS.gene37106:CDS |
| GATTTCTCTATGATGGAAAA+TGG | 0.213336 | 6.2:-12383974 | MS.gene37106:CDS |
| AATGATACTGGTGCTGATTT+CGG | 0.225300 | 6.2:-12383924 | MS.gene37106:CDS |
| GAAAATAAGAATTCAGAAAT+TGG | 0.241198 | 6.2:+12383369 | None:intergenic |
| GAGAAGAAGTTTGTGGGGTC+AGG | 0.260059 | 6.2:+12385076 | None:intergenic |
| CATTTAGGATACTTTCTCTA+TGG | 0.260837 | 6.2:-12383873 | MS.gene37106:CDS |
| CAAATGTGGTGGCATGTAAA+AGG | 0.261000 | 6.2:-12383537 | MS.gene37106:CDS |
| AGCCTACATTCTTTCCATTC+AGG | 0.266105 | 6.2:+12383417 | None:intergenic |
| CATTTATACTCAACACAAAA+TGG | 0.266213 | 6.2:+12384434 | None:intergenic |
| TTCAAATACTTTCTAATCTT+CGG | 0.296853 | 6.2:+12384041 | None:intergenic |
| ATAAGGTGGTTGGTGTTCTT+TGG | 0.298906 | 6.2:-12383476 | MS.gene37106:CDS |
| TTGGTGTTGTTGGTGATTCA+TGG | 0.304570 | 6.2:-12384280 | MS.gene37106:CDS |
| ACACCATGACTCAATCTTAT+AGG | 0.304656 | 6.2:+12384593 | None:intergenic |
| ACAAGAGAGACAGTGGATTA+TGG | 0.310532 | 6.2:-12383449 | MS.gene37106:CDS |
| GGTGATCTTGTTGGTGTTGT+TGG | 0.320823 | 6.2:-12384290 | MS.gene37106:CDS |
| AGGGGTGTGGATAGTAAATT+TGG | 0.327717 | 6.2:+12385052 | None:intergenic |
| AGAATTTGCTAAACAGAATA+AGG | 0.328637 | 6.2:-12383493 | MS.gene37106:CDS |
| ACTCGAATTACACGCGTCTA+AGG | 0.332362 | 6.2:-12383749 | MS.gene37106:CDS |
| GGACATTGCCTGCTTTGAAT+AGG | 0.339470 | 6.2:-12383314 | MS.gene37106:CDS |
| ACCATTGAGCCTTGGCTTGA+TGG | 0.341713 | 6.2:-12384014 | MS.gene37106:CDS |
| TTGTGATTGGAATGAGATAA+AGG | 0.348863 | 6.2:+12384842 | None:intergenic |
| TTCAGCAGCTTTGATGGGTT+TGG | 0.352343 | 6.2:-12383625 | MS.gene37106:CDS |
| TTTAAGTATAGAAGTATTGA+TGG | 0.355015 | 6.2:-12384311 | MS.gene37106:CDS |
| GACATTGCCTGCTTTGAATA+GGG | 0.361169 | 6.2:-12383313 | MS.gene37106:CDS |
| GTTTGGTAATTATTGTCATT+AGG | 0.363364 | 6.2:-12383103 | None:intergenic |
| TTGCAAAGATTGATCCAATC+TGG | 0.368057 | 6.2:-12383839 | MS.gene37106:CDS |
| TGTTACAGAGAATGTCAAAA+AGG | 0.372831 | 6.2:+12384739 | None:intergenic |
| AAAACAGCATCACCACATAA+AGG | 0.386624 | 6.2:+12384464 | None:intergenic |
| TGACTGGATATGGTGAGATC+AGG | 0.388954 | 6.2:+12384875 | None:intergenic |
| TTTAAATTGCATTCGTGGGC+TGG | 0.390508 | 6.2:-12383714 | MS.gene37106:CDS |
| GGTAATGAAGATGAGGAGTT+TGG | 0.392038 | 6.2:-12383144 | MS.gene37106:CDS |
| ATTTCTCTATGATGGAAAAT+GGG | 0.394051 | 6.2:-12383973 | MS.gene37106:CDS |
| GAATGCCAAGTCACAGAAAC+AGG | 0.394183 | 6.2:+12384242 | None:intergenic |
| ACTGGTGCTGATTTCGGGTT+CGG | 0.399899 | 6.2:-12383918 | MS.gene37106:CDS |
| AGATGTGGATGAATGTATTC+AGG | 0.415188 | 6.2:+12384980 | None:intergenic |
| AGAAGAAGTTTGTGGGGTCA+GGG | 0.416084 | 6.2:+12385077 | None:intergenic |
| GGAAATGGATTTCTCTATGA+TGG | 0.417592 | 6.2:-12383981 | MS.gene37106:CDS |
| ATATTATTCAGCAGCTTTGA+TGG | 0.427744 | 6.2:-12383631 | MS.gene37106:CDS |
| AAAATCAGCCATGAGTGAAT+AGG | 0.427893 | 6.2:+12383794 | None:intergenic |
| ACTCATTGACTAATCTGTTA+TGG | 0.430931 | 6.2:-12383182 | MS.gene37106:CDS |
| TTTATGGTAAGTTGATTGCT+AGG | 0.433039 | 6.2:-12384115 | MS.gene37106:CDS |
| AGTATCATTAGACCCTTGTT+TGG | 0.435091 | 6.2:+12383938 | None:intergenic |
| GAAGATTAGAAAGTATTTGA+AGG | 0.436000 | 6.2:-12384039 | MS.gene37106:CDS |
| GATTGCTAGGGCTGCTAGGT+TGG | 0.436344 | 6.2:-12384102 | MS.gene37106:CDS |
| TGAGATCAGGGTTGAAAACT+TGG | 0.436459 | 6.2:+12384888 | None:intergenic |
| CAGAAGATAAGAAGCTTGAA+TGG | 0.438293 | 6.2:-12383219 | MS.gene37106:CDS |
| GCTTTGATGGGTTTGGCATA+TGG | 0.438528 | 6.2:-12383618 | MS.gene37106:CDS |
| AGAGTTTGTGGGGAGGGGTG+TGG | 0.440827 | 6.2:+12385039 | None:intergenic |
| AGTTCTTGTTACCCTTTATG+TGG | 0.443645 | 6.2:-12384476 | MS.gene37106:CDS |
| TCATGCTTGAAATCAGAATC+AGG | 0.443948 | 6.2:+12384518 | None:intergenic |
| AAACAAGGGTCTAATGATAC+TGG | 0.444981 | 6.2:-12383936 | MS.gene37106:CDS |
| GGAGTTTATGATAATGAAAG+TGG | 0.448899 | 6.2:-12383246 | MS.gene37106:CDS |
| CGGATCGACACTTACATCAT+TGG | 0.449963 | 6.2:-12383574 | MS.gene37106:CDS |
| CAATGATCTTAGTGTTACAT+TGG | 0.454165 | 6.2:-12384807 | MS.gene37106:CDS |
| GAAGAAAGAGTTTGTGGGGA+GGG | 0.457376 | 6.2:+12385033 | None:intergenic |
| GTGACTTGGCATTCTACTAA+AGG | 0.459071 | 6.2:-12384233 | MS.gene37106:CDS |
| AATAGGGAAGGTGTTGGAGA+AGG | 0.463879 | 6.2:-12383297 | MS.gene37106:CDS |
| CTGATCCTGTTTCTGTGACT+TGG | 0.465389 | 6.2:-12384247 | MS.gene37106:CDS |
| GCTGGAGGGTTAACCGAGTT+CGG | 0.468666 | 6.2:-12383696 | MS.gene37106:CDS |
| TATGGTTTGCTCCTCCTGAA+TGG | 0.469184 | 6.2:-12383431 | MS.gene37106:CDS |
| TACAAAAGCTGAACATGAAG+AGG | 0.470383 | 6.2:+12384371 | None:intergenic |
| AAACAGCATCACCACATAAA+GGG | 0.475076 | 6.2:+12384465 | None:intergenic |
| TTTGTATGTGGGAATATGAA+AGG | 0.481423 | 6.2:+12385112 | None:intergenic |
| AAATGTGGTGGCATGTAAAA+GGG | 0.482750 | 6.2:-12383536 | MS.gene37106:CDS |
| TCCATCAAGCCAAGGCTCAA+TGG | 0.485829 | 6.2:+12384013 | None:intergenic |
| AGTTGATTGCTAGGGCTGCT+AGG | 0.486787 | 6.2:-12384106 | MS.gene37106:CDS |
| GAATGGAAAGAATGTAGGCT+TGG | 0.487698 | 6.2:-12383414 | MS.gene37106:CDS |
| AAGAAAGAGTTTGTGGGGAG+GGG | 0.488015 | 6.2:+12385034 | None:intergenic |
| ATTTGGAGAGAAGAAGTTTG+TGG | 0.488204 | 6.2:+12385069 | None:intergenic |
| TTTGGAGAGAAGAAGTTTGT+GGG | 0.495413 | 6.2:+12385070 | None:intergenic |
| AGCATGAAGATGTTCTTGAC+AGG | 0.496270 | 6.2:-12384502 | MS.gene37106:CDS |
| GTTGTGATTGAAAGAGGTGT+TGG | 0.497378 | 6.2:+12384713 | None:intergenic |
| TGCAAAGATTGATCCAATCT+GGG | 0.499589 | 6.2:-12383838 | MS.gene37106:CDS |
| AGACGCGTGTAATTCGAGTT+CGG | 0.500187 | 6.2:+12383753 | None:intergenic |
| CATGGAAAACACTGTTGGTT+TGG | 0.500535 | 6.2:-12383120 | MS.gene37106:CDS |
| TTATACTTCCTACCCCAGAT+TGG | 0.500554 | 6.2:+12383825 | None:intergenic |
| TGAAGGAAACCATTGAGCCT+TGG | 0.507320 | 6.2:-12384022 | MS.gene37106:CDS |
| AATGGAAAGAATGTAGGCTT+GGG | 0.510333 | 6.2:-12383413 | MS.gene37106:CDS |
| GGGAAGGTGTTGGAGAAGGA+TGG | 0.516040 | 6.2:-12383293 | MS.gene37106:CDS |
| TATTATTCAGCAGCTTTGAT+GGG | 0.516514 | 6.2:-12383630 | MS.gene37106:CDS |
| ATTTCTTCCATCTCCGAACT+CGG | 0.521394 | 6.2:+12383683 | None:intergenic |
| TTATGGTAAGTTGATTGCTA+GGG | 0.521646 | 6.2:-12384114 | MS.gene37106:CDS |
| TGTTTCTGAGATTGTTTCTG+AGG | 0.529827 | 6.2:-12384573 | MS.gene37106:CDS |
| AATTCAGAAATTGGAAGCAA+TGG | 0.529926 | 6.2:+12383378 | None:intergenic |
| TTTGATGATTTGATGAGATG+TGG | 0.537262 | 6.2:+12384965 | None:intergenic |
| AGTATTGATGGTGATCTTGT+TGG | 0.538879 | 6.2:-12384299 | MS.gene37106:CDS |
| GGGTTAACCGAGTTCGGAGA+TGG | 0.539076 | 6.2:-12383690 | MS.gene37106:CDS |
| TAAATGGGAGAAGAAAGGTT+GGG | 0.539187 | 6.2:-12384417 | MS.gene37106:CDS |
| TAATCTTCGGAATCACATCA+AGG | 0.541337 | 6.2:+12384054 | None:intergenic |
| GTTGGCTTTGATAGCTGAAG+AGG | 0.542751 | 6.2:-12384084 | MS.gene37106:CDS |
| AAATTGCATTCGTGGGCTGG+AGG | 0.545184 | 6.2:-12383711 | MS.gene37106:CDS |
| ATAAATGGGAGAAGAAAGGT+TGG | 0.547703 | 6.2:-12384418 | MS.gene37106:CDS |
| GAAGATGAGGAGTTTGGTCA+TGG | 0.548558 | 6.2:-12383138 | MS.gene37106:CDS |
| GGAGGAATTGTTACCAAACA+AGG | 0.548782 | 6.2:-12383951 | MS.gene37106:CDS |
| AGGACAGTGGAATTTGTATG+TGG | 0.549219 | 6.2:+12385100 | None:intergenic |
| AACTAAAACTAAGAATTGCA+TGG | 0.552087 | 6.2:+12384687 | None:intergenic |
| GGGTTTGTCTATGCTTTGCA+AGG | 0.553185 | 6.2:-12383267 | MS.gene37106:CDS |
| TGGATTGTTGTGATTGAAAG+AGG | 0.557642 | 6.2:+12384707 | None:intergenic |
| AAATGGGAGAAGAAAGGTTG+GGG | 0.557843 | 6.2:-12384416 | MS.gene37106:CDS |
| TTTGGAAGAAAGAGTTTGTG+GGG | 0.558323 | 6.2:+12385029 | None:intergenic |
| TTGGTCATGGAAAACACTGT+TGG | 0.560103 | 6.2:-12383125 | MS.gene37106:CDS |
| GGTGTTGGAGAAGGATGGAA+AGG | 0.561992 | 6.2:-12383288 | MS.gene37106:CDS |
| CTCCTGAATGGAAAGAATGT+AGG | 0.564225 | 6.2:-12383419 | MS.gene37106:CDS |
| AGTTTAACAATGGTCAAACA+TGG | 0.565459 | 6.2:-12384634 | MS.gene37106:CDS |
| GACTGGATATGGTGAGATCA+GGG | 0.565463 | 6.2:+12384876 | None:intergenic |
| CTACATTCTTTCCATTCAGG+AGG | 0.570531 | 6.2:+12383420 | None:intergenic |
| GAGTATAAATGGGAGAAGAA+AGG | 0.571497 | 6.2:-12384422 | MS.gene37106:CDS |
| GCTAAACAGAATAAGGTGGT+TGG | 0.572255 | 6.2:-12383486 | MS.gene37106:CDS |
| CAGTAGAGGTAATGAAGATG+AGG | 0.573549 | 6.2:-12383151 | MS.gene37106:CDS |
| GCCTCAAGCCTATTCACTCA+TGG | 0.573740 | 6.2:-12383802 | MS.gene37106:CDS |
| GACACTCATCTCGTTGCAGT+CGG | 0.574147 | 6.2:-12383594 | MS.gene37106:CDS |
| AATTGCATTCGTGGGCTGGA+GGG | 0.579853 | 6.2:-12383710 | MS.gene37106:CDS |
| CTCTATGATGGAAAATGGGG+AGG | 0.580686 | 6.2:-12383969 | MS.gene37106:CDS |
| CATTGACTAATCTGTTATGG+TGG | 0.583205 | 6.2:-12383179 | MS.gene37106:CDS |
| GTGTTGGAGAAGGATGGAAA+GGG | 0.585952 | 6.2:-12383287 | MS.gene37106:CDS |
| TTGCCTGCTTTGAATAGGGA+AGG | 0.587367 | 6.2:-12383309 | MS.gene37106:CDS |
| ACACCTTCCCTATTCAAAGC+AGG | 0.588958 | 6.2:+12383306 | None:intergenic |
| TTGGAGAGAAGAAGTTTGTG+GGG | 0.591393 | 6.2:+12385071 | None:intergenic |
| ATATACCTTCTTCAAATCTG+CGG | 0.606287 | 6.2:-12384784 | MS.gene37106:CDS |
| GGACAGTGGAATTTGTATGT+GGG | 0.609910 | 6.2:+12385101 | None:intergenic |
| GCTTTGAATAGGGAAGGTGT+TGG | 0.615296 | 6.2:-12383303 | MS.gene37106:CDS |
| AGATTGATCCAATCTGGGGT+AGG | 0.622347 | 6.2:-12383833 | MS.gene37106:CDS |
| TTTCTCTATGATGGAAAATG+GGG | 0.626052 | 6.2:-12383972 | MS.gene37106:CDS |
| GGAAGAAAGAGTTTGTGGGG+AGG | 0.634899 | 6.2:+12385032 | None:intergenic |
| TTGTGAAGGAACTTGTGGAG+TGG | 0.635089 | 6.2:-12383335 | MS.gene37106:CDS |
| AATGTGGTGGCATGTAAAAG+GGG | 0.637277 | 6.2:-12383535 | MS.gene37106:CDS |
| TTCATGCAGCTCAAATGTGG+TGG | 0.639673 | 6.2:-12383548 | MS.gene37106:CDS |
| ATTTGCTAAACAGAATAAGG+TGG | 0.641739 | 6.2:-12383490 | MS.gene37106:CDS |
| TCACCTATAAGATTGAGTCA+TGG | 0.642791 | 6.2:-12384596 | MS.gene37106:CDS |
| TTAAAAGTTCCATCAAGCCA+AGG | 0.643862 | 6.2:+12384005 | None:intergenic |
| TGGTCTAACAAGAGAGACAG+TGG | 0.644703 | 6.2:-12383456 | MS.gene37106:CDS |
| GCCATGAGTGAATAGGCTTG+AGG | 0.651473 | 6.2:+12383801 | None:intergenic |
| ACAAAAGCTGAACATGAAGA+GGG | 0.653397 | 6.2:+12384372 | None:intergenic |
| TGTGGGGTCAGGGAGGACAG+TGG | 0.665821 | 6.2:+12385087 | None:intergenic |
| TTATGGTGGATTCACAGTAG+AGG | 0.667166 | 6.2:-12383165 | MS.gene37106:CDS |
| GTGGATGAATGTATTCAGGT+TGG | 0.668698 | 6.2:+12384984 | None:intergenic |
| AAATTCATGCAGCTCAAATG+TGG | 0.677636 | 6.2:-12383551 | MS.gene37106:CDS |
| AATGGGAGAAGAAAGGTTGG+GGG | 0.683842 | 6.2:-12384415 | MS.gene37106:CDS |
| GCAAAGATTGATCCAATCTG+GGG | 0.688955 | 6.2:-12383837 | MS.gene37106:CDS |
| GAGGAATTGTTACCAAACAA+GGG | 0.692935 | 6.2:-12383950 | MS.gene37106:CDS |
| AGAAGTTTGTGGGGTCAGGG+AGG | 0.699715 | 6.2:+12385080 | None:intergenic |
| ATGTGGTGGCATGTAAAAGG+GGG | 0.701043 | 6.2:-12383534 | MS.gene37106:CDS |
| ATGGGAGAAGAAAGGTTGGG+GGG | 0.730445 | 6.2:-12384414 | MS.gene37106:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGATCATCATTATCATTT+AGG | - | chr6.2:12384355-12384374 | MS.gene37106:CDS | 20.0% |
| !! | GAAAATAAGAATTCAGAAAT+TGG | + | chr6.2:12384877-12384896 | None:intergenic | 20.0% |
| !! | TTCAAATACTTTCTAATCTT+CGG | + | chr6.2:12384205-12384224 | None:intergenic | 20.0% |
| !!! | ATATGAAAGGTTTGTTTTTT+TGG | + | chr6.2:12383121-12383140 | None:intergenic | 20.0% |
| !!! | ATTTTGTGTTGAGTATAAAT+GGG | - | chr6.2:12383811-12383830 | MS.gene37106:CDS | 20.0% |
| !!! | TATGAAAGGTTTGTTTTTTT+GGG | + | chr6.2:12383120-12383139 | None:intergenic | 20.0% |
| !!! | TTTAAGTATAGAAGTATTGA+TGG | - | chr6.2:12383932-12383951 | MS.gene37106:CDS | 20.0% |
| ! | AACTAAAACTAAGAATTGCA+TGG | + | chr6.2:12383559-12383578 | None:intergenic | 25.0% |
| ! | CAAAACTTTGTTCTCAAAAA+TGG | - | chr6.2:12383233-12383252 | MS.gene37106:CDS | 25.0% |
| ! | CATTTATACTCAACACAAAA+TGG | + | chr6.2:12383812-12383831 | None:intergenic | 25.0% |
| !! | ATCTTTTTAAATTGCATTCG+TGG | - | chr6.2:12384524-12384543 | MS.gene37106:CDS | 25.0% |
| !! | ATTTCTCTATGATGGAAAAT+GGG | - | chr6.2:12384270-12384289 | MS.gene37106:CDS | 25.0% |
| !! | CATACTTTTCAGTTTAACAA+TGG | - | chr6.2:12383599-12383618 | MS.gene37106:CDS | 25.0% |
| !! | CATTTTGTGTTGAGTATAAA+TGG | - | chr6.2:12383810-12383829 | MS.gene37106:CDS | 25.0% |
| !! | TCTTTTTAAATTGCATTCGT+GGG | - | chr6.2:12384525-12384544 | MS.gene37106:CDS | 25.0% |
| !!! | AGAATTTGCTAAACAGAATA+AGG | - | chr6.2:12384750-12384769 | MS.gene37106:CDS | 25.0% |
| !!! | CATTTTTGAGAACAAAGTTT+TGG | + | chr6.2:12383235-12383254 | None:intergenic | 25.0% |
| !!! | GAAGATTAGAAAGTATTTGA+AGG | - | chr6.2:12384204-12384223 | MS.gene37106:CDS | 25.0% |
| !!! | TTCAAATGTTGATTTTGTGA+AGG | - | chr6.2:12384894-12384913 | MS.gene37106:CDS | 25.0% |
| AAGAGTTGAAAAAACGAGAT+GGG | + | chr6.2:12383325-12383344 | None:intergenic | 30.0% | |
| AATTCAGAAATTGGAAGCAA+TGG | + | chr6.2:12384868-12384887 | None:intergenic | 30.0% | |
| AGTTTAACAATGGTCAAACA+TGG | - | chr6.2:12383609-12383628 | MS.gene37106:CDS | 30.0% | |
| ATATACCTTCTTCAAATCTG+CGG | - | chr6.2:12383459-12383478 | MS.gene37106:CDS | 30.0% | |
| CAATGATCTTAGTGTTACAT+TGG | - | chr6.2:12383436-12383455 | MS.gene37106:CDS | 30.0% | |
| GTTACAGAGAATGTCAAAAA+GGG | + | chr6.2:12383506-12383525 | None:intergenic | 30.0% | |
| TGTTACAGAGAATGTCAAAA+AGG | + | chr6.2:12383507-12383526 | None:intergenic | 30.0% | |
| TTGTGATTGGAATGAGATAA+AGG | + | chr6.2:12383404-12383423 | None:intergenic | 30.0% | |
| TTTGTATGTGGGAATATGAA+AGG | + | chr6.2:12383134-12383153 | None:intergenic | 30.0% | |
| ! | ACTCATTGACTAATCTGTTA+TGG | - | chr6.2:12385061-12385080 | MS.gene37106:CDS | 30.0% |
| ! | ATATTATTCAGCAGCTTTGA+TGG | - | chr6.2:12384612-12384631 | MS.gene37106:CDS | 30.0% |
| ! | ATTTGCTAAACAGAATAAGG+TGG | - | chr6.2:12384753-12384772 | MS.gene37106:CDS | 30.0% |
| ! | CATTTAGGATACTTTCTCTA+TGG | - | chr6.2:12384370-12384389 | MS.gene37106:CDS | 30.0% |
| ! | GATGGAACTTTTAATGGAAA+TGG | - | chr6.2:12384247-12384266 | MS.gene37106:CDS | 30.0% |
| ! | GATTTCTCTATGATGGAAAA+TGG | - | chr6.2:12384269-12384288 | MS.gene37106:CDS | 30.0% |
| ! | GGAGTTTATGATAATGAAAG+TGG | - | chr6.2:12384997-12385016 | MS.gene37106:CDS | 30.0% |
| ! | GTAAGAAGAGATTTTGTGAT+TGG | + | chr6.2:12383417-12383436 | None:intergenic | 30.0% |
| ! | TATTATTCAGCAGCTTTGAT+GGG | - | chr6.2:12384613-12384632 | MS.gene37106:CDS | 30.0% |
| ! | TTTCTCTATGATGGAAAATG+GGG | - | chr6.2:12384271-12384290 | MS.gene37106:CDS | 30.0% |
| ! | TTTGATGATTTGATGAGATG+TGG | + | chr6.2:12383281-12383300 | None:intergenic | 30.0% |
| !! | ACGAATTCGTCTTACTTTTA+TGG | - | chr6.2:12384112-12384131 | MS.gene37106:CDS | 30.0% |
| !! | TTATGGTAAGTTGATTGCTA+GGG | - | chr6.2:12384129-12384148 | MS.gene37106:CDS | 30.0% |
| !! | TTTATGGTAAGTTGATTGCT+AGG | - | chr6.2:12384128-12384147 | MS.gene37106:CDS | 30.0% |
| !! | TTTTGGAAGAAAGAGTTTGT+GGG | + | chr6.2:12383218-12383237 | None:intergenic | 30.0% |
| !!! | ATTGTTTCTGAGGCTTTTTA+TGG | - | chr6.2:12383680-12383699 | MS.gene37106:CDS | 30.0% |
| !!! | TAAAGGTTCGATTTTTTGAC+TGG | + | chr6.2:12383387-12383406 | None:intergenic | 30.0% |
| !!! | TTCGATTTTTTGACTGGATA+TGG | + | chr6.2:12383381-12383400 | None:intergenic | 30.0% |
| AAAAACCGCAGATTTGAAGA+AGG | + | chr6.2:12383467-12383486 | None:intergenic | 35.0% | |
| AAAACAGCATCACCACATAA+AGG | + | chr6.2:12383782-12383801 | None:intergenic | 35.0% | |
| AAAATCAGCCATGAGTGAAT+AGG | + | chr6.2:12384452-12384471 | None:intergenic | 35.0% | |
| AAACAAGGGTCTAATGATAC+TGG | - | chr6.2:12384307-12384326 | MS.gene37106:CDS | 35.0% | |
| AAACAGCATCACCACATAAA+GGG | + | chr6.2:12383781-12383800 | None:intergenic | 35.0% | |
| AAATGTGGTGGCATGTAAAA+GGG | - | chr6.2:12384707-12384726 | MS.gene37106:CDS | 35.0% | |
| AAATTCATGCAGCTCAAATG+TGG | - | chr6.2:12384692-12384711 | MS.gene37106:CDS | 35.0% | |
| AATGGAAAGAATGTAGGCTT+GGG | - | chr6.2:12384830-12384849 | MS.gene37106:CDS | 35.0% | |
| ACAAAAGCTGAACATGAAGA+GGG | + | chr6.2:12383874-12383893 | None:intergenic | 35.0% | |
| ACACCATGACTCAATCTTAT+AGG | + | chr6.2:12383653-12383672 | None:intergenic | 35.0% | |
| AGATGTGGATGAATGTATTC+AGG | + | chr6.2:12383266-12383285 | None:intergenic | 35.0% | |
| AGTATCATTAGACCCTTGTT+TGG | + | chr6.2:12384308-12384327 | None:intergenic | 35.0% | |
| AGTTCTTGTTACCCTTTATG+TGG | - | chr6.2:12383767-12383786 | MS.gene37106:CDS | 35.0% | |
| ATAAATGGGAGAAGAAAGGT+TGG | - | chr6.2:12383825-12383844 | MS.gene37106:CDS | 35.0% | |
| ATTTGGAGAGAAGAAGTTTG+TGG | + | chr6.2:12383177-12383196 | None:intergenic | 35.0% | |
| CAGAAGATAAGAAGCTTGAA+TGG | - | chr6.2:12385024-12385043 | MS.gene37106:CDS | 35.0% | |
| GAAGAGTTGAAAAAACGAGA+TGG | + | chr6.2:12383326-12383345 | None:intergenic | 35.0% | |
| GAGGAATTGTTACCAAACAA+GGG | - | chr6.2:12384293-12384312 | MS.gene37106:CDS | 35.0% | |
| GAGTATAAATGGGAGAAGAA+AGG | - | chr6.2:12383821-12383840 | MS.gene37106:CDS | 35.0% | |
| TAAATGGGAGAAGAAAGGTT+GGG | - | chr6.2:12383826-12383845 | MS.gene37106:CDS | 35.0% | |
| TAATCTTCGGAATCACATCA+AGG | + | chr6.2:12384192-12384211 | None:intergenic | 35.0% | |
| TACAAAAGCTGAACATGAAG+AGG | + | chr6.2:12383875-12383894 | None:intergenic | 35.0% | |
| TCACCTATAAGATTGAGTCA+TGG | - | chr6.2:12383647-12383666 | MS.gene37106:CDS | 35.0% | |
| TCATGCTTGAAATCAGAATC+AGG | + | chr6.2:12383728-12383747 | None:intergenic | 35.0% | |
| TGCAAAGATTGATCCAATCT+GGG | - | chr6.2:12384405-12384424 | MS.gene37106:CDS | 35.0% | |
| TGGATTGTTGTGATTGAAAG+AGG | + | chr6.2:12383539-12383558 | None:intergenic | 35.0% | |
| TTAAAAGTTCCATCAAGCCA+AGG | + | chr6.2:12384241-12384260 | None:intergenic | 35.0% | |
| TTGCAAAGATTGATCCAATC+TGG | - | chr6.2:12384404-12384423 | MS.gene37106:CDS | 35.0% | |
| TTTGGAAGAAAGAGTTTGTG+GGG | + | chr6.2:12383217-12383236 | None:intergenic | 35.0% | |
| TTTGGAGAGAAGAAGTTTGT+GGG | + | chr6.2:12383176-12383195 | None:intergenic | 35.0% | |
| ! | CATTGACTAATCTGTTATGG+TGG | - | chr6.2:12385064-12385083 | MS.gene37106:CDS | 35.0% |
| ! | GGAAATGGATTTCTCTATGA+TGG | - | chr6.2:12384262-12384281 | MS.gene37106:CDS | 35.0% |
| ! | TGATTTTGTGAAGGAACTTG+TGG | - | chr6.2:12384903-12384922 | MS.gene37106:CDS | 35.0% |
| ! | TGGCTTGATGGAACTTTTAA+TGG | - | chr6.2:12384241-12384260 | MS.gene37106:CDS | 35.0% |
| !! | AATGATACTGGTGCTGATTT+CGG | - | chr6.2:12384319-12384338 | MS.gene37106:CDS | 35.0% |
| !! | AGTATTGATGGTGATCTTGT+TGG | - | chr6.2:12383944-12383963 | MS.gene37106:CDS | 35.0% |
| !! | GTTCTTTTGAGAGATGTTGA+GGG | - | chr6.2:12384067-12384086 | MS.gene37106:CDS | 35.0% |
| !! | TGTTCTTTTGAGAGATGTTG+AGG | - | chr6.2:12384066-12384085 | MS.gene37106:CDS | 35.0% |
| !! | TGTTTCTGAGATTGTTTCTG+AGG | - | chr6.2:12383670-12383689 | MS.gene37106:CDS | 35.0% |
| !!! | AGCTTGAATGGTTTTGATGA+TGG | - | chr6.2:12385036-12385055 | MS.gene37106:CDS | 35.0% |
| !!! | GTTTTGGAAGAAAGAGTTTG+TGG | + | chr6.2:12383219-12383238 | None:intergenic | 35.0% |
| AAATGGGAGAAGAAAGGTTG+GGG | - | chr6.2:12383827-12383846 | MS.gene37106:CDS | 40.0% | |
| AATGTGGTGGCATGTAAAAG+GGG | - | chr6.2:12384708-12384727 | MS.gene37106:CDS | 40.0% | |
| AGCATGAAGATGTTCTTGAC+AGG | - | chr6.2:12383741-12383760 | MS.gene37106:CDS | 40.0% | |
| AGCCTACATTCTTTCCATTC+AGG | + | chr6.2:12384829-12384848 | None:intergenic | 40.0% | |
| AGGACAGTGGAATTTGTATG+TGG | + | chr6.2:12383146-12383165 | None:intergenic | 40.0% | |
| ATTTCTTCCATCTCCGAACT+CGG | + | chr6.2:12384563-12384582 | None:intergenic | 40.0% | |
| CAAATGTGGTGGCATGTAAA+AGG | - | chr6.2:12384706-12384725 | MS.gene37106:CDS | 40.0% | |
| CAGTAGAGGTAATGAAGATG+AGG | - | chr6.2:12385092-12385111 | MS.gene37106:CDS | 40.0% | |
| CTACATTCTTTCCATTCAGG+AGG | + | chr6.2:12384826-12384845 | None:intergenic | 40.0% | |
| CTCCTGAATGGAAAGAATGT+AGG | - | chr6.2:12384824-12384843 | MS.gene37106:CDS | 40.0% | |
| GAATGGAAAGAATGTAGGCT+TGG | - | chr6.2:12384829-12384848 | MS.gene37106:CDS | 40.0% | |
| GCAAAGATTGATCCAATCTG+GGG | - | chr6.2:12384406-12384425 | MS.gene37106:CDS | 40.0% | |
| GCTAAACAGAATAAGGTGGT+TGG | - | chr6.2:12384757-12384776 | MS.gene37106:CDS | 40.0% | |
| GGACAGTGGAATTTGTATGT+GGG | + | chr6.2:12383145-12383164 | None:intergenic | 40.0% | |
| GGAGGAATTGTTACCAAACA+AGG | - | chr6.2:12384292-12384311 | MS.gene37106:CDS | 40.0% | |
| GGTAATGAAGATGAGGAGTT+TGG | - | chr6.2:12385099-12385118 | MS.gene37106:CDS | 40.0% | |
| GTGGATGAATGTATTCAGGT+TGG | + | chr6.2:12383262-12383281 | None:intergenic | 40.0% | |
| TGAGATCAGGGTTGAAAACT+TGG | + | chr6.2:12383358-12383377 | None:intergenic | 40.0% | |
| TTATACTTCCTACCCCAGAT+TGG | + | chr6.2:12384421-12384440 | None:intergenic | 40.0% | |
| TTGGAGAGAAGAAGTTTGTG+GGG | + | chr6.2:12383175-12383194 | None:intergenic | 40.0% | |
| TTGGTCATGGAAAACACTGT+TGG | - | chr6.2:12385118-12385137 | MS.gene37106:CDS | 40.0% | |
| TTTAAATTGCATTCGTGGGC+TGG | - | chr6.2:12384529-12384548 | MS.gene37106:CDS | 40.0% | |
| ! | AGGCTTTTTATGGTGTGGTT+AGG | - | chr6.2:12383690-12383709 | MS.gene37106:CDS | 40.0% |
| ! | AGGGGTGTGGATAGTAAATT+TGG | + | chr6.2:12383194-12383213 | None:intergenic | 40.0% |
| ! | ATAAGGTGGTTGGTGTTCTT+TGG | - | chr6.2:12384767-12384786 | MS.gene37106:CDS | 40.0% |
| ! | CATGGAAAACACTGTTGGTT+TGG | - | chr6.2:12385123-12385142 | MS.gene37106:CDS | 40.0% |
| ! | GACATTGCCTGCTTTGAATA+GGG | - | chr6.2:12384930-12384949 | MS.gene37106:CDS | 40.0% |
| ! | GTGACTTGGCATTCTACTAA+AGG | - | chr6.2:12384010-12384029 | MS.gene37106:CDS | 40.0% |
| ! | GTTGTGATTGAAAGAGGTGT+TGG | + | chr6.2:12383533-12383552 | None:intergenic | 40.0% |
| !! | ACAAGAGAGACAGTGGATTA+TGG | - | chr6.2:12384794-12384813 | MS.gene37106:CDS | 40.0% |
| !! | ATGATACTGGTGCTGATTTC+GGG | - | chr6.2:12384320-12384339 | MS.gene37106:CDS | 40.0% |
| !! | TTATGGTGGATTCACAGTAG+AGG | - | chr6.2:12385078-12385097 | MS.gene37106:CDS | 40.0% |
| !! | TTGGTGTTGTTGGTGATTCA+TGG | - | chr6.2:12383963-12383982 | MS.gene37106:CDS | 40.0% |
| !!! | CTGCGGTTTTTTCTTGTTAG+AGG | - | chr6.2:12383476-12383495 | MS.gene37106:CDS | 40.0% |
| !!! | TTCTGAGGCTTTTTATGGTG+TGG | - | chr6.2:12383685-12383704 | MS.gene37106:CDS | 40.0% |
| AAGAAAGAGTTTGTGGGGAG+GGG | + | chr6.2:12383212-12383231 | None:intergenic | 45.0% | |
| AATGGGAGAAGAAAGGTTGG+GGG | - | chr6.2:12383828-12383847 | MS.gene37106:CDS | 45.0% | |
| ACACCTTCCCTATTCAAAGC+AGG | + | chr6.2:12384940-12384959 | None:intergenic | 45.0% | |
| ACTCGAATTACACGCGTCTA+AGG | - | chr6.2:12384494-12384513 | MS.gene37106:CDS | 45.0% | |
| AGAAGAAGTTTGTGGGGTCA+GGG | + | chr6.2:12383169-12383188 | None:intergenic | 45.0% | |
| ATGTGGTGGCATGTAAAAGG+GGG | - | chr6.2:12384709-12384728 | MS.gene37106:CDS | 45.0% | |
| CGGATCGACACTTACATCAT+TGG | - | chr6.2:12384669-12384688 | MS.gene37106:CDS | 45.0% | |
| GAAGAAAGAGTTTGTGGGGA+GGG | + | chr6.2:12383213-12383232 | None:intergenic | 45.0% | |
| GAAGATGAGGAGTTTGGTCA+TGG | - | chr6.2:12385105-12385124 | MS.gene37106:CDS | 45.0% | |
| GAATGCCAAGTCACAGAAAC+AGG | + | chr6.2:12384004-12384023 | None:intergenic | 45.0% | |
| GACTGGATATGGTGAGATCA+GGG | + | chr6.2:12383370-12383389 | None:intergenic | 45.0% | |
| GGGTTTGTCTATGCTTTGCA+AGG | - | chr6.2:12384976-12384995 | MS.gene37106:CDS | 45.0% | |
| GTGTTGGAGAAGGATGGAAA+GGG | - | chr6.2:12384956-12384975 | MS.gene37106:CDS | 45.0% | |
| TGAAGGAAACCATTGAGCCT+TGG | - | chr6.2:12384221-12384240 | MS.gene37106:CDS | 45.0% | |
| TGACTGGATATGGTGAGATC+AGG | + | chr6.2:12383371-12383390 | None:intergenic | 45.0% | |
| TGGTCTAACAAGAGAGACAG+TGG | - | chr6.2:12384787-12384806 | MS.gene37106:CDS | 45.0% | |
| TTCATGCAGCTCAAATGTGG+TGG | - | chr6.2:12384695-12384714 | MS.gene37106:CDS | 45.0% | |
| TTGTGAAGGAACTTGTGGAG+TGG | - | chr6.2:12384908-12384927 | MS.gene37106:CDS | 45.0% | |
| ! | AGACGCGTGTAATTCGAGTT+CGG | + | chr6.2:12384493-12384512 | None:intergenic | 45.0% |
| ! | AGATTGATCCAATCTGGGGT+AGG | - | chr6.2:12384410-12384429 | MS.gene37106:CDS | 45.0% |
| ! | CTCTATGATGGAAAATGGGG+AGG | - | chr6.2:12384274-12384293 | MS.gene37106:CDS | 45.0% |
| ! | GCTTTGAATAGGGAAGGTGT+TGG | - | chr6.2:12384940-12384959 | MS.gene37106:CDS | 45.0% |
| ! | GGACATTGCCTGCTTTGAAT+AGG | - | chr6.2:12384929-12384948 | MS.gene37106:CDS | 45.0% |
| ! | TTGCCTGCTTTGAATAGGGA+AGG | - | chr6.2:12384934-12384953 | MS.gene37106:CDS | 45.0% |
| !! | AATAGGGAAGGTGTTGGAGA+AGG | - | chr6.2:12384946-12384965 | MS.gene37106:CDS | 45.0% |
| !! | CTGATCCTGTTTCTGTGACT+TGG | - | chr6.2:12383996-12384015 | MS.gene37106:CDS | 45.0% |
| !! | GCTTTGATGGGTTTGGCATA+TGG | - | chr6.2:12384625-12384644 | MS.gene37106:CDS | 45.0% |
| !! | GGTGATCTTGTTGGTGTTGT+TGG | - | chr6.2:12383953-12383972 | MS.gene37106:CDS | 45.0% |
| !! | GTTGGCTTTGATAGCTGAAG+AGG | - | chr6.2:12384159-12384178 | MS.gene37106:CDS | 45.0% |
| !! | TATGGTTTGCTCCTCCTGAA+TGG | - | chr6.2:12384812-12384831 | MS.gene37106:CDS | 45.0% |
| !! | TTCAGCAGCTTTGATGGGTT+TGG | - | chr6.2:12384618-12384637 | MS.gene37106:CDS | 45.0% |
| AGTTGATTGCTAGGGCTGCT+AGG | - | chr6.2:12384137-12384156 | MS.gene37106:CDS | 50.0% | |
| ATGGGAGAAGAAAGGTTGGG+GGG | - | chr6.2:12383829-12383848 | MS.gene37106:CDS | 50.0% | |
| GACACTCATCTCGTTGCAGT+CGG | - | chr6.2:12384649-12384668 | MS.gene37106:CDS | 50.0% | |
| GAGAAGAAGTTTGTGGGGTC+AGG | + | chr6.2:12383170-12383189 | None:intergenic | 50.0% | |
| GCCATGAGTGAATAGGCTTG+AGG | + | chr6.2:12384445-12384464 | None:intergenic | 50.0% | |
| GCCTCAAGCCTATTCACTCA+TGG | - | chr6.2:12384441-12384460 | MS.gene37106:CDS | 50.0% | |
| GGAAGAAAGAGTTTGTGGGG+AGG | + | chr6.2:12383214-12383233 | None:intergenic | 50.0% | |
| TCCATCAAGCCAAGGCTCAA+TGG | + | chr6.2:12384233-12384252 | None:intergenic | 50.0% | |
| ! | ACCATTGAGCCTTGGCTTGA+TGG | - | chr6.2:12384229-12384248 | MS.gene37106:CDS | 50.0% |
| ! | GGTGTTGGAGAAGGATGGAA+AGG | - | chr6.2:12384955-12384974 | MS.gene37106:CDS | 50.0% |
| !! | AAATTGCATTCGTGGGCTGG+AGG | - | chr6.2:12384532-12384551 | MS.gene37106:CDS | 50.0% |
| !! | AATTGCATTCGTGGGCTGGA+GGG | - | chr6.2:12384533-12384552 | MS.gene37106:CDS | 50.0% |
| !! | ACTGGTGCTGATTTCGGGTT+CGG | - | chr6.2:12384325-12384344 | MS.gene37106:CDS | 50.0% |
| AGAAGTTTGTGGGGTCAGGG+AGG | + | chr6.2:12383166-12383185 | None:intergenic | 55.0% | |
| GATTGCTAGGGCTGCTAGGT+TGG | - | chr6.2:12384141-12384160 | MS.gene37106:CDS | 55.0% | |
| GCTGGAGGGTTAACCGAGTT+CGG | - | chr6.2:12384547-12384566 | MS.gene37106:CDS | 55.0% | |
| GGGTTAACCGAGTTCGGAGA+TGG | - | chr6.2:12384553-12384572 | MS.gene37106:CDS | 55.0% | |
| !! | GGGAAGGTGTTGGAGAAGGA+TGG | - | chr6.2:12384950-12384969 | MS.gene37106:CDS | 55.0% |
| AGAGTTTGTGGGGAGGGGTG+TGG | + | chr6.2:12383207-12383226 | None:intergenic | 60.0% | |
| TGTGGGGTCAGGGAGGACAG+TGG | + | chr6.2:12383159-12383178 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 12383104 | 12385161 | 12383104 | ID=MS.gene37106 |
| chr6.2 | mRNA | 12383104 | 12385161 | 12383104 | ID=MS.gene37106.t1;Parent=MS.gene37106 |
| chr6.2 | exon | 12383104 | 12385161 | 12383104 | ID=MS.gene37106.t1.exon1;Parent=MS.gene37106.t1 |
| chr6.2 | CDS | 12383104 | 12385161 | 12383104 | ID=cds.MS.gene37106.t1;Parent=MS.gene37106.t1 |
| Gene Sequence |
| Protein sequence |
