Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40022.t1 | XP_003590724.1 | 96.1 | 512 | 18 | 1 | 1 | 510 | 1 | 512 | 7.20E-277 | 962.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40022.t1 | F4HSD4 | 54.5 | 488 | 188 | 6 | 31 | 510 | 32 | 493 | 2.7e-131 | 470.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40022.t1 | G7I2N7 | 96.1 | 512 | 18 | 1 | 1 | 510 | 1 | 512 | 5.2e-277 | 962.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049666 | MS.gene40022 | 0.804866 | 1.76E-49 | -1.69E-46 |
| MS.gene049824 | MS.gene40022 | 0.831012 | 2.12E-55 | -1.69E-46 |
| MS.gene049825 | MS.gene40022 | 0.858201 | 9.69E-63 | -1.69E-46 |
| MS.gene049850 | MS.gene40022 | 0.800667 | 1.29E-48 | -1.69E-46 |
| MS.gene049873 | MS.gene40022 | 0.859246 | 4.72E-63 | -1.69E-46 |
| MS.gene050026 | MS.gene40022 | 0.81551 | 8.91E-52 | -1.69E-46 |
| MS.gene050201 | MS.gene40022 | 0.809302 | 2.02E-50 | -1.69E-46 |
| MS.gene050303 | MS.gene40022 | 0.82729 | 1.70E-54 | -1.69E-46 |
| MS.gene050355 | MS.gene40022 | 0.820073 | 8.32E-53 | -1.69E-46 |
| MS.gene050719 | MS.gene40022 | 0.809694 | 1.67E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene40022 | 0.80999 | 1.44E-50 | -1.69E-46 |
| MS.gene050799 | MS.gene40022 | 0.826433 | 2.72E-54 | -1.69E-46 |
| MS.gene051247 | MS.gene40022 | 0.818174 | 2.25E-52 | -1.69E-46 |
| MS.gene051594 | MS.gene40022 | 0.822994 | 1.76E-53 | -1.69E-46 |
| MS.gene051700 | MS.gene40022 | 0.815284 | 1.00E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene40022 | 0.808675 | 2.76E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene40022 | 0.820469 | 6.75E-53 | -1.69E-46 |
| MS.gene051957 | MS.gene40022 | 0.809665 | 1.69E-50 | -1.69E-46 |
| MS.gene052208 | MS.gene40022 | 0.804218 | 2.40E-49 | -1.69E-46 |
| MS.gene052358 | MS.gene40022 | -0.81445 | 1.53E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene40022 | 0.848378 | 6.37E-60 | -1.69E-46 |
| MS.gene052561 | MS.gene40022 | 0.818836 | 1.59E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene40022 | 0.829354 | 5.39E-55 | -1.69E-46 |
| MS.gene052584 | MS.gene40022 | 0.835156 | 1.98E-56 | -1.69E-46 |
| MS.gene053054 | MS.gene40022 | -0.806405 | 8.36E-50 | -1.69E-46 |
| MS.gene053145 | MS.gene40022 | 0.804853 | 1.77E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene40022 | 0.83929 | 1.73E-57 | -1.69E-46 |
| MS.gene053294 | MS.gene40022 | 0.806055 | 9.91E-50 | -1.69E-46 |
| MS.gene053599 | MS.gene40022 | 0.801368 | 9.31E-49 | -1.69E-46 |
| MS.gene05365 | MS.gene40022 | 0.834278 | 3.29E-56 | -1.69E-46 |
| MS.gene053883 | MS.gene40022 | 0.826306 | 2.92E-54 | -1.69E-46 |
| MS.gene053900 | MS.gene40022 | 0.817954 | 2.52E-52 | -1.69E-46 |
| MS.gene05415 | MS.gene40022 | 0.80123 | 9.93E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene40022 | 0.823613 | 1.26E-53 | -1.69E-46 |
| MS.gene054967 | MS.gene40022 | 0.806715 | 7.19E-50 | -1.69E-46 |
| MS.gene055466 | MS.gene40022 | 0.823742 | 1.18E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene40022 | 0.802349 | 5.85E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene40022 | 0.80996 | 1.46E-50 | -1.69E-46 |
| MS.gene055580 | MS.gene40022 | -0.801234 | 9.91E-49 | -1.69E-46 |
| MS.gene055589 | MS.gene40022 | 0.808059 | 3.73E-50 | -1.69E-46 |
| MS.gene055778 | MS.gene40022 | 0.860945 | 1.45E-63 | -1.69E-46 |
| MS.gene055808 | MS.gene40022 | 0.841011 | 6.15E-58 | -1.69E-46 |
| MS.gene055818 | MS.gene40022 | 0.823485 | 1.35E-53 | -1.69E-46 |
| MS.gene056091 | MS.gene40022 | 0.858361 | 8.68E-63 | -1.69E-46 |
| MS.gene056174 | MS.gene40022 | 0.801884 | 7.30E-49 | -1.69E-46 |
| MS.gene056366 | MS.gene40022 | 0.819358 | 1.21E-52 | -1.69E-46 |
| MS.gene056498 | MS.gene40022 | 0.801102 | 1.05E-48 | -1.69E-46 |
| MS.gene056642 | MS.gene40022 | 0.810107 | 1.36E-50 | -1.69E-46 |
| MS.gene057060 | MS.gene40022 | 0.817757 | 2.79E-52 | -1.69E-46 |
| MS.gene057314 | MS.gene40022 | 0.813686 | 2.26E-51 | -1.69E-46 |
| MS.gene057414 | MS.gene40022 | 0.80799 | 3.86E-50 | -1.69E-46 |
| MS.gene058037 | MS.gene40022 | 0.859668 | 3.53E-63 | -1.69E-46 |
| MS.gene058625 | MS.gene40022 | 0.82406 | 9.90E-54 | -1.69E-46 |
| MS.gene059015 | MS.gene40022 | 0.815998 | 6.93E-52 | -1.69E-46 |
| MS.gene05953 | MS.gene40022 | 0.801825 | 7.50E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene40022 | 0.866375 | 2.99E-65 | -1.69E-46 |
| MS.gene059625 | MS.gene40022 | 0.816497 | 5.36E-52 | -1.69E-46 |
| MS.gene059935 | MS.gene40022 | 0.814236 | 1.71E-51 | -1.69E-46 |
| MS.gene060429 | MS.gene40022 | 0.869976 | 2.07E-66 | -1.69E-46 |
| MS.gene060521 | MS.gene40022 | 0.815577 | 8.61E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene40022 | 0.825586 | 4.32E-54 | -1.69E-46 |
| MS.gene060587 | MS.gene40022 | 0.803091 | 4.11E-49 | -1.69E-46 |
| MS.gene060634 | MS.gene40022 | -0.813716 | 2.22E-51 | -1.69E-46 |
| MS.gene060917 | MS.gene40022 | 0.806924 | 6.50E-50 | -1.69E-46 |
| MS.gene061040 | MS.gene40022 | -0.828037 | 1.12E-54 | -1.69E-46 |
| MS.gene061266 | MS.gene40022 | 0.825718 | 4.02E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40022.t1 | MTR_1g073010 | 96.094 | 512 | 18 | 1 | 1 | 510 | 1 | 512 | 0.0 | 997 |
| MS.gene40022.t1 | MTR_2g019790 | 45.109 | 184 | 91 | 3 | 306 | 486 | 302 | 478 | 1.79e-37 | 146 |
| MS.gene40022.t1 | MTR_1g023160 | 40.611 | 229 | 116 | 5 | 250 | 470 | 202 | 418 | 1.44e-32 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40022.t1 | AT1G07615 | 54.902 | 510 | 196 | 5 | 9 | 510 | 10 | 493 | 1.21e-167 | 483 |
| MS.gene40022.t1 | AT5G18570 | 44.022 | 184 | 93 | 3 | 306 | 486 | 362 | 538 | 1.85e-36 | 144 |
Find 128 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACATTACTAAGGATTTC+TGG | 0.165517 | 1.4:+59714267 | None:intergenic |
| ACTACCCTTAGGCCGAATTT+AGG | 0.211294 | 1.4:-59713934 | MS.gene40022:CDS |
| CTTTGCTGTGAGTGCTGTTT+TGG | 0.221466 | 1.4:-59713581 | MS.gene40022:CDS |
| GTCTAAGCTTGCCCCTTTGC+AGG | 0.266746 | 1.4:-59715841 | MS.gene40022:intron |
| TGATATTCCTGGACTTATAA+AGG | 0.274187 | 1.4:-59713875 | MS.gene40022:CDS |
| TGGAATGCTCTCGTAGAGTT+TGG | 0.302804 | 1.4:-59714923 | MS.gene40022:CDS |
| AGACGTGGCTGCTGCTTTAC+CGG | 0.311080 | 1.4:-59713776 | MS.gene40022:CDS |
| CTACCCTTAGGCCGAATTTA+GGG | 0.313913 | 1.4:-59713933 | MS.gene40022:CDS |
| GGTAGGTGGTGATGTAATTC+TGG | 0.326577 | 1.4:-59714943 | MS.gene40022:CDS |
| TTAGACCCTTGGGATGTTCC+TGG | 0.330001 | 1.4:-59714519 | MS.gene40022:CDS |
| CATGTCCAAGTCCACGATTT+TGG | 0.354076 | 1.4:+59713845 | None:intergenic |
| GGAATGCTCTCGTAGAGTTT+GGG | 0.359105 | 1.4:-59714922 | MS.gene40022:CDS |
| TATATCCTCTGAACCAAGTT+CGG | 0.363030 | 1.4:+59714299 | None:intergenic |
| CATAGAACGCACGAAGGTTC+TGG | 0.366062 | 1.4:-59713809 | MS.gene40022:CDS |
| AACATTTGCTTCAGTAGCTT+GGG | 0.369905 | 1.4:+59714395 | None:intergenic |
| TAGTTCAAATTCCCTAAATT+CGG | 0.374007 | 1.4:+59713922 | None:intergenic |
| ATAATTGTGGCTGATATTCC+TGG | 0.394031 | 1.4:-59713886 | MS.gene40022:CDS |
| CAACATTTGCTTCAGTAGCT+TGG | 0.398231 | 1.4:+59714394 | None:intergenic |
| GCTGGTAAAAGCACTTTACT+TGG | 0.404940 | 1.4:-59714000 | MS.gene40022:CDS |
| GGTGGCAGTGGTGGGGTAGG+TGG | 0.417686 | 1.4:-59714957 | MS.gene40022:CDS |
| ATATCCTCTGAACCAAGTTC+GGG | 0.422031 | 1.4:+59714300 | None:intergenic |
| AGGAACCAGGGGTGCTGATA+AGG | 0.429683 | 1.4:-59714746 | MS.gene40022:intron |
| AATTCCCTAAATTCGGCCTA+AGG | 0.438327 | 1.4:+59713929 | None:intergenic |
| TTAATTCAGCAACATTACTA+AGG | 0.438606 | 1.4:+59714259 | None:intergenic |
| AATCATGCGATATTTGATCT+AGG | 0.444427 | 1.4:+59713488 | None:intergenic |
| GTTAACTCTTCCTTAAGTAC+AGG | 0.447102 | 1.4:-59714099 | MS.gene40022:CDS |
| CCTCGGCAGATTTAGACCCT+TGG | 0.450051 | 1.4:-59714530 | MS.gene40022:CDS |
| TCTAATGAAACTCCCGAACT+TGG | 0.450853 | 1.4:-59714312 | MS.gene40022:CDS |
| ACCAGGTAAACCTGTACTTA+AGG | 0.451987 | 1.4:+59714089 | None:intergenic |
| AATCTTATTTGCGACTATCA+AGG | 0.455534 | 1.4:+59713666 | None:intergenic |
| CTCGGCAGATTTAGACCCTT+GGG | 0.455712 | 1.4:-59714529 | MS.gene40022:CDS |
| AAGCCTCCGACTACGAAGGC+AGG | 0.456383 | 1.4:-59714156 | MS.gene40022:CDS |
| ACAGCACTCACAGCAAAGAT+AGG | 0.456403 | 1.4:+59713586 | None:intergenic |
| GGTACACGTAACCAATGTTC+AGG | 0.459400 | 1.4:-59714133 | MS.gene40022:CDS |
| GATATTCCTGGACTTATAAA+GGG | 0.465243 | 1.4:-59713874 | MS.gene40022:CDS |
| GTTAAGATATTTGCAAAAGC+AGG | 0.467802 | 1.4:-59715688 | MS.gene40022:CDS |
| ATCTGGAGGGTTTATCCAAT+CGG | 0.468500 | 1.4:-59713693 | MS.gene40022:CDS |
| TTTAATGTAGGTGGCAGTGG+TGG | 0.468806 | 1.4:-59714966 | MS.gene40022:intron |
| AGAGTTAAAGAGAAGAGTCC+AGG | 0.470720 | 1.4:-59713614 | MS.gene40022:CDS |
| TTAATGTAGGTGGCAGTGGT+GGG | 0.470839 | 1.4:-59714965 | MS.gene40022:intron |
| ATGTCGACTGCGGCGAGAGC+TGG | 0.471508 | 1.4:+59715645 | None:intergenic |
| ACTGTACTTCATCTTGTTAG+TGG | 0.476585 | 1.4:-59714585 | MS.gene40022:CDS |
| TTCGTAGTCGGAGGCTTCCT+AGG | 0.478808 | 1.4:+59714162 | None:intergenic |
| GTCAATGCAATACATCCTAC+TGG | 0.486779 | 1.4:-59714429 | MS.gene40022:CDS |
| TCCTTAAGTACAGGTTTACC+TGG | 0.491918 | 1.4:-59714090 | MS.gene40022:CDS |
| TCTAGAGCTTGAGTACCATC+TGG | 0.493988 | 1.4:-59713710 | MS.gene40022:CDS |
| GCTGCTTTACCGGGAAGAAA+AGG | 0.495442 | 1.4:-59713766 | MS.gene40022:CDS |
| GCACACCAAAATCGTGGACT+TGG | 0.496498 | 1.4:-59713850 | MS.gene40022:CDS |
| GTAGGTGGCAGTGGTGGGGT+AGG | 0.497438 | 1.4:-59714960 | MS.gene40022:intron |
| TACTTCCAACGTTACAAAGC+AGG | 0.504969 | 1.4:-59714457 | MS.gene40022:CDS |
| TTGTTTAATGTAGGTGGCAG+TGG | 0.505030 | 1.4:-59714969 | MS.gene40022:intron |
| GTTGCTGAATTAACAGAAGA+AGG | 0.511848 | 1.4:-59714249 | MS.gene40022:CDS |
| CACGAAGGTTCTGGCTTATG+TGG | 0.512150 | 1.4:-59713800 | MS.gene40022:CDS |
| GATTGATGAGGAAGGTGCTG+AGG | 0.515849 | 1.4:-59713647 | MS.gene40022:CDS |
| CTAAGACCAGCTTTAAGCTC+TGG | 0.516203 | 1.4:+59713547 | None:intergenic |
| GATATTTGATCTAGGTAAAG+TGG | 0.520840 | 1.4:+59713496 | None:intergenic |
| TGTGCACCCTTTATAAGTCC+AGG | 0.526218 | 1.4:+59713868 | None:intergenic |
| ATTGTTGCTCGTGGAGGAGA+AGG | 0.529077 | 1.4:-59714216 | MS.gene40022:CDS |
| CGTGGAGGAGAAGGTGGTCT+CGG | 0.529675 | 1.4:-59714207 | MS.gene40022:CDS |
| GCATGGTAGATAGCAGGTAA+TGG | 0.541441 | 1.4:-59714796 | MS.gene40022:intron |
| CAACAGATTATTGTTGCTCG+TGG | 0.544802 | 1.4:-59714225 | MS.gene40022:CDS |
| ATTGGAGATGAACCTGCAAA+GGG | 0.544998 | 1.4:+59715829 | None:intergenic |
| AGAAAATGCACCATCAGCTA+TGG | 0.545941 | 1.4:+59715612 | None:intergenic |
| AATAACCTTATCAGCACCCC+TGG | 0.546348 | 1.4:+59714741 | None:intergenic |
| GGTCTTAGAGTGCTTGTCAA+TGG | 0.548551 | 1.4:-59713532 | MS.gene40022:CDS |
| CTCAAACTTGTGTATCGAGA+TGG | 0.549144 | 1.4:-59715908 | MS.gene40022:CDS |
| TAATGTAGGTGGCAGTGGTG+GGG | 0.549379 | 1.4:-59714964 | MS.gene40022:intron |
| GACGTGGCTGCTGCTTTACC+GGG | 0.552200 | 1.4:-59713775 | MS.gene40022:CDS |
| CGTAGAGTTTGGGATTTCAG+TGG | 0.552303 | 1.4:-59714912 | MS.gene40022:CDS |
| TAGGTTGTTCGTGTACCGAT+TGG | 0.553618 | 1.4:-59714609 | MS.gene40022:CDS |
| ATTCCCTAAATTCGGCCTAA+GGG | 0.555377 | 1.4:+59713930 | None:intergenic |
| GATTGGAGATGAACCTGCAA+AGG | 0.558258 | 1.4:+59715828 | None:intergenic |
| AGTAGAACCATCGCGAGGGT+CGG | 0.558484 | 1.4:+59714476 | None:intergenic |
| AACGGTGCATGGTAGATAGC+AGG | 0.561820 | 1.4:-59714802 | MS.gene40022:intron |
| AAGGCATAGTGACCAACAGC+AGG | 0.566091 | 1.4:+59713958 | None:intergenic |
| GGGATACCAGAGCTTAAAGC+TGG | 0.567066 | 1.4:-59713553 | MS.gene40022:CDS |
| AGATGAAGTACAGTGCCAAT+CGG | 0.571977 | 1.4:+59714594 | None:intergenic |
| CCGCAGTCGACATGATAGAA+AGG | 0.572937 | 1.4:-59715635 | MS.gene40022:CDS |
| TCGAGAGCTAAGCCTGCTGT+TGG | 0.575285 | 1.4:-59713970 | MS.gene40022:CDS |
| GAGTTAAAGAGAAGAGTCCA+GGG | 0.575569 | 1.4:-59713613 | MS.gene40022:CDS |
| TGTACCCCTGCCTTCGTAGT+CGG | 0.577190 | 1.4:+59714150 | None:intergenic |
| GACTATCAAGGATGGCCGAT+TGG | 0.580706 | 1.4:+59713678 | None:intergenic |
| AGCCTCCGACTACGAAGGCA+GGG | 0.582496 | 1.4:-59714155 | MS.gene40022:CDS |
| AAGTCTTTCAGTTGTTCCCA+CGG | 0.582651 | 1.4:+59713736 | None:intergenic |
| CAGATTATTGTTGCTCGTGG+AGG | 0.584571 | 1.4:-59714222 | MS.gene40022:CDS |
| GAACCTTCGTGCGTTCTATG+TGG | 0.589370 | 1.4:+59713812 | None:intergenic |
| GATAGAAAGGCCATAGCTGA+TGG | 0.590848 | 1.4:-59715622 | MS.gene40022:intron |
| ACTGTCAGTGTCCTGAACAT+TGG | 0.594372 | 1.4:+59714122 | None:intergenic |
| ATAGCAGGTAATGGAGGACA+TGG | 0.597504 | 1.4:-59714787 | MS.gene40022:CDS |
| GATCATTCCGACCCTCGCGA+TGG | 0.602902 | 1.4:-59714483 | MS.gene40022:CDS |
| ATTCGGCCTAAGGGTAGTGA+AGG | 0.603401 | 1.4:+59713939 | None:intergenic |
| AGAGCTTGAGTACCATCTGG+AGG | 0.604807 | 1.4:-59713707 | MS.gene40022:CDS |
| TTATTTGCGACTATCAAGGA+TGG | 0.608281 | 1.4:+59713670 | None:intergenic |
| ATAAGAACAGTTTCAGAACC+AGG | 0.610177 | 1.4:+59714072 | None:intergenic |
| AAAGCAGGAGATGGTGGTAA+CGG | 0.611800 | 1.4:-59715673 | MS.gene40022:CDS |
| ATATTTGATCTAGGTAAAGT+GGG | 0.612494 | 1.4:+59713497 | None:intergenic |
| TTTGTGGGAATGCCTAATGC+TGG | 0.612770 | 1.4:-59714018 | MS.gene40022:CDS |
| GCAAATAAGATTGATGAGGA+AGG | 0.615672 | 1.4:-59713655 | MS.gene40022:CDS |
| GTTGCTCGTGGAGGAGAAGG+TGG | 0.615939 | 1.4:-59714213 | MS.gene40022:CDS |
| AACTCCCGAACTTGGTTCAG+AGG | 0.616094 | 1.4:-59714304 | MS.gene40022:CDS |
| AGTACACCAGGAACATCCCA+AGG | 0.617161 | 1.4:+59714513 | None:intergenic |
| ATATTTGCAAAAGCAGGAGA+TGG | 0.618455 | 1.4:-59715682 | MS.gene40022:CDS |
| ACCCCTGCCTTCGTAGTCGG+AGG | 0.621038 | 1.4:+59714153 | None:intergenic |
| TTTGCAAAAGCAGGAGATGG+TGG | 0.621662 | 1.4:-59715679 | MS.gene40022:CDS |
| GAGCTTGAGTACCATCTGGA+GGG | 0.622668 | 1.4:-59713706 | MS.gene40022:CDS |
| ACTATGCCTTCACTACCCTT+AGG | 0.622794 | 1.4:-59713945 | MS.gene40022:CDS |
| TGGTAGATAGCAGGTAATGG+AGG | 0.626963 | 1.4:-59714793 | MS.gene40022:intron |
| TGATGATATGTCGATAATTG+TGG | 0.627592 | 1.4:-59713899 | MS.gene40022:CDS |
| GTGGGAACAACTGAAAGACT+TGG | 0.628785 | 1.4:-59713734 | MS.gene40022:CDS |
| TGGGATGAAGAGCAGCCAGT+AGG | 0.630566 | 1.4:+59714414 | None:intergenic |
| TGATCATCTACAAGTACACC+AGG | 0.639058 | 1.4:+59714501 | None:intergenic |
| CCAAGGGTCTAAATCTGCCG+AGG | 0.648440 | 1.4:+59714530 | None:intergenic |
| TAGGAAGCCTCCGACTACGA+AGG | 0.650216 | 1.4:-59714160 | MS.gene40022:CDS |
| CAGCAAAGATAGGAACACCC+TGG | 0.655094 | 1.4:+59713596 | None:intergenic |
| GCCTCCGACTACGAAGGCAG+GGG | 0.656919 | 1.4:-59714154 | MS.gene40022:CDS |
| AGTCGCAAATAAGATTGATG+AGG | 0.657149 | 1.4:-59713659 | MS.gene40022:CDS |
| AAGGGTGCACACCAAAATCG+TGG | 0.658610 | 1.4:-59713856 | MS.gene40022:CDS |
| AAGAAAAGGAATTTCACCGT+GGG | 0.658650 | 1.4:-59713752 | MS.gene40022:CDS |
| GATTGGATAAACCCTCCAGA+TGG | 0.671658 | 1.4:+59713695 | None:intergenic |
| TGGAAGTAGAACCATCGCGA+GGG | 0.675258 | 1.4:+59714472 | None:intergenic |
| TTGGAAGTAGAACCATCGCG+AGG | 0.677202 | 1.4:+59714471 | None:intergenic |
| TCTGGCTTATGTGGTAGACG+TGG | 0.716654 | 1.4:-59713791 | MS.gene40022:CDS |
| CCTTTCTATCATGTCGACTG+CGG | 0.723582 | 1.4:+59715635 | None:intergenic |
| TTGGAGATGAACCTGCAAAG+GGG | 0.725714 | 1.4:+59715830 | None:intergenic |
| GTACACCAGGAACATCCCAA+GGG | 0.738023 | 1.4:+59714514 | None:intergenic |
| GCAAGCTTAGACTTGCTGTG+AGG | 0.740111 | 1.4:+59715852 | None:intergenic |
| GAAGAAAAGGAATTTCACCG+TGG | 0.751479 | 1.4:-59713753 | MS.gene40022:CDS |
| GCGCCACATAGAACGCACGA+AGG | 0.760320 | 1.4:-59713815 | MS.gene40022:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTAAATCTGTATATAT+AGG | + | chr1.4:59714355-59714374 | None:intergenic | 10.0% |
| !!! | TATTTTTATTTTCTTCTATT+TGG | - | chr1.4:59714760-59714779 | MS.gene40022:CDS | 10.0% |
| !!! | TTTTTTGACATAATTTTTTT+TGG | + | chr1.4:59714590-59714609 | None:intergenic | 10.0% |
| !!! | AAATACGAAACAATTTTTAA+AGG | + | chr1.4:59714745-59714764 | None:intergenic | 15.0% |
| !!! | ATTTTGAATTGTTAGTAATT+TGG | - | chr1.4:59714310-59714329 | MS.gene40022:CDS | 15.0% |
| !!! | TTTTGAATTATTGAAAATGT+GGG | + | chr1.4:59714099-59714118 | None:intergenic | 15.0% |
| !! | AATTGAGTAAATAACCAATT+TGG | - | chr1.4:59714039-59714058 | MS.gene40022:CDS | 20.0% |
| !! | TATAATTTCAAAGACCAAAT+TGG | + | chr1.4:59714056-59714075 | None:intergenic | 20.0% |
| !! | TATATTGAAAAATGTCAGTA+AGG | - | chr1.4:59714126-59714145 | MS.gene40022:CDS | 20.0% |
| !! | TTAATATTTACTCATTTGTC+CGG | + | chr1.4:59713964-59713983 | None:intergenic | 20.0% |
| !! | TTGATGTTAAGAAATTTAGA+TGG | - | chr1.4:59714421-59714440 | MS.gene40022:CDS | 20.0% |
| !!! | AATTTGGTCTTTGAAATTAT+AGG | - | chr1.4:59714055-59714074 | MS.gene40022:CDS | 20.0% |
| !!! | GTTTTGAATTATTGAAAATG+TGG | + | chr1.4:59714100-59714119 | None:intergenic | 20.0% |
| !!! | TAATGATAATGACATTAAGT+TGG | - | chr1.4:59714180-59714199 | MS.gene40022:CDS | 20.0% |
| !!! | TATTAACATTTTGCAATTTC+AGG | - | chr1.4:59714283-59714302 | MS.gene40022:CDS | 20.0% |
| !!! | TGAACTTTTTTTACTATAGA+AGG | + | chr1.4:59714888-59714907 | None:intergenic | 20.0% |
| !!! | TTGATAATAATCTATGCATA+GGG | - | chr1.4:59714252-59714271 | MS.gene40022:CDS | 20.0% |
| !!! | TTTGATAATAATCTATGCAT+AGG | - | chr1.4:59714251-59714270 | MS.gene40022:CDS | 20.0% |
| ! | AAAAAATAAGATAGGAACCA+GGG | - | chr1.4:59714682-59714701 | MS.gene40022:intron | 25.0% |
| ! | AAAGTTAAGTGGATAGTATA+AGG | - | chr1.4:59714222-59714241 | MS.gene40022:CDS | 25.0% |
| ! | AAGTTAAGTGGATAGTATAA+GGG | - | chr1.4:59714223-59714242 | MS.gene40022:CDS | 25.0% |
| ! | AGCTATTGTAAACATTAATG+AGG | + | chr1.4:59714159-59714178 | None:intergenic | 25.0% |
| ! | AGTAAAAAAAGTTCAATCCT+CGG | - | chr1.4:59714893-59714912 | MS.gene40022:intron | 25.0% |
| ! | ATATTTGATCTAGGTAAAGT+GGG | + | chr1.4:59715946-59715965 | None:intergenic | 25.0% |
| ! | CTAAATTTCTTAACATCAAC+TGG | + | chr1.4:59714420-59714439 | None:intergenic | 25.0% |
| ! | CTATTGTAAACATTAATGAG+GGG | + | chr1.4:59714157-59714176 | None:intergenic | 25.0% |
| ! | GCTATTGTAAACATTAATGA+GGG | + | chr1.4:59714158-59714177 | None:intergenic | 25.0% |
| ! | GGATCATCAAAAAATAAGAT+AGG | - | chr1.4:59714674-59714693 | MS.gene40022:intron | 25.0% |
| ! | TAATATTTACTCATTTGTCC+GGG | + | chr1.4:59713963-59713982 | None:intergenic | 25.0% |
| ! | TAGTTCAAATTCCCTAAATT+CGG | + | chr1.4:59715521-59715540 | None:intergenic | 25.0% |
| ! | TTAATTCAGCAACATTACTA+AGG | + | chr1.4:59715184-59715203 | None:intergenic | 25.0% |
| ! | TTGAATTGTTAGTAATTTGG+AGG | - | chr1.4:59714313-59714332 | MS.gene40022:CDS | 25.0% |
| !! | GGAATGAATTTAAAGTTAAG+TGG | - | chr1.4:59714211-59714230 | MS.gene40022:CDS | 25.0% |
| !!! | CAAAATGTCGTTTTTTTTCA+TGG | + | chr1.4:59713655-59713674 | None:intergenic | 25.0% |
| !!! | TGACATTAAGTTGGAAATAT+CGG | - | chr1.4:59714189-59714208 | MS.gene40022:CDS | 25.0% |
| AAAAATAAGATAGGAACCAG+GGG | - | chr1.4:59714683-59714702 | MS.gene40022:intron | 30.0% | |
| AATCATGCGATATTTGATCT+AGG | + | chr1.4:59715955-59715974 | None:intergenic | 30.0% | |
| ACAATGTGCTTGTTTAATGT+AGG | - | chr1.4:59714462-59714481 | MS.gene40022:CDS | 30.0% | |
| ATCTTCTAGATTTGACAATG+CGG | - | chr1.4:59713874-59713893 | MS.gene40022:CDS | 30.0% | |
| CAAAAAATAAGATAGGAACC+AGG | - | chr1.4:59714681-59714700 | MS.gene40022:intron | 30.0% | |
| CCTATTAAAGCAAGTTAGTT+TGG | + | chr1.4:59714815-59714834 | None:intergenic | 30.0% | |
| GATATTCCTGGACTTATAAA+GGG | - | chr1.4:59715566-59715585 | MS.gene40022:intron | 30.0% | |
| GATATTTGATCTAGGTAAAG+TGG | + | chr1.4:59715947-59715966 | None:intergenic | 30.0% | |
| GTTAAGATATTTGCAAAAGC+AGG | - | chr1.4:59713752-59713771 | MS.gene40022:CDS | 30.0% | |
| TGATATTCCTGGACTTATAA+AGG | - | chr1.4:59715565-59715584 | MS.gene40022:intron | 30.0% | |
| TGATGATATGTCGATAATTG+TGG | - | chr1.4:59715541-59715560 | MS.gene40022:intron | 30.0% | |
| TGTCTATTCAAAAAGATCCT+AGG | - | chr1.4:59715261-59715280 | MS.gene40022:intron | 30.0% | |
| ! | AAAGCAAGTTAGTTTGGATA+AGG | + | chr1.4:59714809-59714828 | None:intergenic | 30.0% |
| ! | AATCTTATTTGCGACTATCA+AGG | + | chr1.4:59715777-59715796 | None:intergenic | 30.0% |
| !! | CCAAACTAACTTGCTTTAAT+AGG | - | chr1.4:59714812-59714831 | MS.gene40022:intron | 30.0% |
| !! | GACATTAAGTTGGAAATATC+GGG | - | chr1.4:59714190-59714209 | MS.gene40022:CDS | 30.0% |
| !!! | AATGTCGTTTTTTTTCATGG+TGG | + | chr1.4:59713652-59713671 | None:intergenic | 30.0% |
| !!! | ATTGCTGATGTTAGTTTTGT+GGG | - | chr1.4:59715407-59715426 | MS.gene40022:intron | 30.0% |
| AACATTTGCTTCAGTAGCTT+GGG | + | chr1.4:59715048-59715067 | None:intergenic | 35.0% | |
| AAGAAAAGGAATTTCACCGT+GGG | - | chr1.4:59715688-59715707 | MS.gene40022:CDS | 35.0% | |
| ACTGTACTTCATCTTGTTAG+TGG | - | chr1.4:59714855-59714874 | MS.gene40022:intron | 35.0% | |
| AGTCGCAAATAAGATTGATG+AGG | - | chr1.4:59715781-59715800 | MS.gene40022:intron | 35.0% | |
| ATAAGAACAGTTTCAGAACC+AGG | + | chr1.4:59715371-59715390 | None:intergenic | 35.0% | |
| ATAATTGTGGCTGATATTCC+TGG | - | chr1.4:59715554-59715573 | MS.gene40022:intron | 35.0% | |
| ATATTTGCAAAAGCAGGAGA+TGG | - | chr1.4:59713758-59713777 | MS.gene40022:CDS | 35.0% | |
| ATGTGCTTGTTTAATGTAGG+TGG | - | chr1.4:59714465-59714484 | MS.gene40022:CDS | 35.0% | |
| GATAAAAAGTTGGAGGTCTT+GGG | - | chr1.4:59713931-59713950 | MS.gene40022:CDS | 35.0% | |
| GCAAATAAGATTGATGAGGA+AGG | - | chr1.4:59715785-59715804 | MS.gene40022:intron | 35.0% | |
| GCAACATTACTAAGGATTTC+TGG | + | chr1.4:59715176-59715195 | None:intergenic | 35.0% | |
| GTTAACTCTTCCTTAAGTAC+AGG | - | chr1.4:59715341-59715360 | MS.gene40022:intron | 35.0% | |
| GTTGCTGAATTAACAGAAGA+AGG | - | chr1.4:59715191-59715210 | MS.gene40022:intron | 35.0% | |
| TATATCCTCTGAACCAAGTT+CGG | + | chr1.4:59715144-59715163 | None:intergenic | 35.0% | |
| TCTTAACATCAACTGGATGA+TGG | + | chr1.4:59714413-59714432 | None:intergenic | 35.0% | |
| TCTTCTAGATTTGACAATGC+GGG | - | chr1.4:59713875-59713894 | MS.gene40022:CDS | 35.0% | |
| TGAGCTAAGGGATAAAAAGT+TGG | - | chr1.4:59713921-59713940 | MS.gene40022:CDS | 35.0% | |
| TGTAATTACTCACTGCATTG+AGG | - | chr1.4:59713695-59713714 | MS.gene40022:CDS | 35.0% | |
| TTATTTGCGACTATCAAGGA+TGG | + | chr1.4:59715773-59715792 | None:intergenic | 35.0% | |
| TTTCATGTCAGTGACACTAA+CGG | - | chr1.4:59714620-59714639 | MS.gene40022:intron | 35.0% | |
| ! | TGGTAGAAAATGAGTTGGAT+TGG | + | chr1.4:59713632-59713651 | None:intergenic | 35.0% |
| ! | TTTTTCCTGCTTTGTAACGT+TGG | + | chr1.4:59714991-59715010 | None:intergenic | 35.0% |
| !! | AAAGTGCTTTTACCAGCATT+AGG | + | chr1.4:59715437-59715456 | None:intergenic | 35.0% |
| !! | GCATTGAGGTTTTTGTTTGT+AGG | - | chr1.4:59713709-59713728 | MS.gene40022:CDS | 35.0% |
| !!! | CATTGCTGATGTTAGTTTTG+TGG | - | chr1.4:59715406-59715425 | MS.gene40022:intron | 35.0% |
| AAGTCTTTCAGTTGTTCCCA+CGG | + | chr1.4:59715707-59715726 | None:intergenic | 40.0% | |
| AATTCCCTAAATTCGGCCTA+AGG | + | chr1.4:59715514-59715533 | None:intergenic | 40.0% | |
| ACCAGGTAAACCTGTACTTA+AGG | + | chr1.4:59715354-59715373 | None:intergenic | 40.0% | |
| AGAAAATGCACCATCAGCTA+TGG | + | chr1.4:59713831-59713850 | None:intergenic | 40.0% | |
| AGAGTTAAAGAGAAGAGTCC+AGG | - | chr1.4:59715826-59715845 | MS.gene40022:intron | 40.0% | |
| AGATGAAGTACAGTGCCAAT+CGG | + | chr1.4:59714849-59714868 | None:intergenic | 40.0% | |
| ATATCCTCTGAACCAAGTTC+GGG | + | chr1.4:59715143-59715162 | None:intergenic | 40.0% | |
| ATCTGGAGGGTTTATCCAAT+CGG | - | chr1.4:59715747-59715766 | MS.gene40022:intron | 40.0% | |
| ATTCCCTAAATTCGGCCTAA+GGG | + | chr1.4:59715513-59715532 | None:intergenic | 40.0% | |
| ATTGGAGATGAACCTGCAAA+GGG | + | chr1.4:59713614-59713633 | None:intergenic | 40.0% | |
| CAACAGATTATTGTTGCTCG+TGG | - | chr1.4:59715215-59715234 | MS.gene40022:intron | 40.0% | |
| CAACATTTGCTTCAGTAGCT+TGG | + | chr1.4:59715049-59715068 | None:intergenic | 40.0% | |
| CATGGTGGTAGAAAATGAGT+TGG | + | chr1.4:59713637-59713656 | None:intergenic | 40.0% | |
| CTCAAACTTGTGTATCGAGA+TGG | - | chr1.4:59713532-59713551 | MS.gene40022:CDS | 40.0% | |
| CTTCTAGATTTGACAATGCG+GGG | - | chr1.4:59713876-59713895 | MS.gene40022:CDS | 40.0% | |
| GAAGAAAAGGAATTTCACCG+TGG | - | chr1.4:59715687-59715706 | MS.gene40022:CDS | 40.0% | |
| GAGTTAAAGAGAAGAGTCCA+GGG | - | chr1.4:59715827-59715846 | MS.gene40022:intron | 40.0% | |
| GCTAAGGGATAAAAAGTTGG+AGG | - | chr1.4:59713924-59713943 | MS.gene40022:CDS | 40.0% | |
| GGATAAAAAGTTGGAGGTCT+TGG | - | chr1.4:59713930-59713949 | MS.gene40022:CDS | 40.0% | |
| GTCAATGCAATACATCCTAC+TGG | - | chr1.4:59715011-59715030 | MS.gene40022:intron | 40.0% | |
| TACTTCCAACGTTACAAAGC+AGG | - | chr1.4:59714983-59715002 | MS.gene40022:intron | 40.0% | |
| TCCTTAAGTACAGGTTTACC+TGG | - | chr1.4:59715350-59715369 | MS.gene40022:intron | 40.0% | |
| TCTAATGAAACTCCCGAACT+TGG | - | chr1.4:59715128-59715147 | MS.gene40022:intron | 40.0% | |
| TGATCATCTACAAGTACACC+AGG | + | chr1.4:59714942-59714961 | None:intergenic | 40.0% | |
| TTCTAGATTTGACAATGCGG+GGG | - | chr1.4:59713877-59713896 | MS.gene40022:CDS | 40.0% | |
| TTGTTTAATGTAGGTGGCAG+TGG | - | chr1.4:59714471-59714490 | MS.gene40022:CDS | 40.0% | |
| ! | GGTGAAATTCCTTTTCTTCC+CGG | + | chr1.4:59715686-59715705 | None:intergenic | 40.0% |
| !! | CTCTAACTGGTTTGAGCTAA+GGG | - | chr1.4:59713909-59713928 | MS.gene40022:CDS | 40.0% |
| !! | GCTGGTAAAAGCACTTTACT+TGG | - | chr1.4:59715440-59715459 | MS.gene40022:intron | 40.0% |
| AATAACCTTATCAGCACCCC+TGG | + | chr1.4:59714702-59714721 | None:intergenic | 45.0% | |
| ACAGCACTCACAGCAAAGAT+AGG | + | chr1.4:59715857-59715876 | None:intergenic | 45.0% | |
| ACTACCCTTAGGCCGAATTT+AGG | - | chr1.4:59715506-59715525 | MS.gene40022:intron | 45.0% | |
| ACTATGCCTTCACTACCCTT+AGG | - | chr1.4:59715495-59715514 | MS.gene40022:intron | 45.0% | |
| ACTGTCAGTGTCCTGAACAT+TGG | + | chr1.4:59715321-59715340 | None:intergenic | 45.0% | |
| CAGATTATTGTTGCTCGTGG+AGG | - | chr1.4:59715218-59715237 | MS.gene40022:intron | 45.0% | |
| CTACCCTTAGGCCGAATTTA+GGG | - | chr1.4:59715507-59715526 | MS.gene40022:intron | 45.0% | |
| GATAGAAAGGCCATAGCTGA+TGG | - | chr1.4:59713818-59713837 | MS.gene40022:CDS | 45.0% | |
| GATTGGAGATGAACCTGCAA+AGG | + | chr1.4:59713615-59713634 | None:intergenic | 45.0% | |
| GATTGGATAAACCCTCCAGA+TGG | + | chr1.4:59715748-59715767 | None:intergenic | 45.0% | |
| GCATGGTAGATAGCAGGTAA+TGG | - | chr1.4:59714644-59714663 | MS.gene40022:intron | 45.0% | |
| GGAATGCTCTCGTAGAGTTT+GGG | - | chr1.4:59714518-59714537 | MS.gene40022:CDS | 45.0% | |
| GGTACACGTAACCAATGTTC+AGG | - | chr1.4:59715307-59715326 | MS.gene40022:intron | 45.0% | |
| GTGGGAACAACTGAAAGACT+TGG | - | chr1.4:59715706-59715725 | MS.gene40022:CDS | 45.0% | |
| TGGAATGCTCTCGTAGAGTT+TGG | - | chr1.4:59714517-59714536 | MS.gene40022:CDS | 45.0% | |
| TGTGCACCCTTTATAAGTCC+AGG | + | chr1.4:59715575-59715594 | None:intergenic | 45.0% | |
| TTAATGTAGGTGGCAGTGGT+GGG | - | chr1.4:59714475-59714494 | MS.gene40022:CDS | 45.0% | |
| TTGGAGATGAACCTGCAAAG+GGG | + | chr1.4:59713613-59713632 | None:intergenic | 45.0% | |
| TTTAATGTAGGTGGCAGTGG+TGG | - | chr1.4:59714474-59714493 | MS.gene40022:CDS | 45.0% | |
| TTTGCAAAAGCAGGAGATGG+TGG | - | chr1.4:59713761-59713780 | MS.gene40022:CDS | 45.0% | |
| TTTGTGGGAATGCCTAATGC+TGG | - | chr1.4:59715422-59715441 | MS.gene40022:intron | 45.0% | |
| ! | AAAGCAGGAGATGGTGGTAA+CGG | - | chr1.4:59713767-59713786 | MS.gene40022:CDS | 45.0% |
| ! | CATGTCCAAGTCCACGATTT+TGG | + | chr1.4:59715598-59715617 | None:intergenic | 45.0% |
| ! | CCTTTCTATCATGTCGACTG+CGG | + | chr1.4:59713808-59713827 | None:intergenic | 45.0% |
| ! | CGTAGAGTTTGGGATTTCAG+TGG | - | chr1.4:59714528-59714547 | MS.gene40022:CDS | 45.0% |
| ! | GGTAGGTGGTGATGTAATTC+TGG | - | chr1.4:59714497-59714516 | MS.gene40022:CDS | 45.0% |
| ! | GGTCTTAGAGTGCTTGTCAA+TGG | - | chr1.4:59715908-59715927 | MS.gene40022:CDS | 45.0% |
| ! | TAGGTTGTTCGTGTACCGAT+TGG | - | chr1.4:59714831-59714850 | MS.gene40022:intron | 45.0% |
| ! | TCTAGAGCTTGAGTACCATC+TGG | - | chr1.4:59715730-59715749 | MS.gene40022:intron | 45.0% |
| ! | TGGTAGATAGCAGGTAATGG+AGG | - | chr1.4:59714647-59714666 | MS.gene40022:intron | 45.0% |
| !! | ATAGCAGGTAATGGAGGACA+TGG | - | chr1.4:59714653-59714672 | MS.gene40022:intron | 45.0% |
| !! | CTAAGACCAGCTTTAAGCTC+TGG | + | chr1.4:59715896-59715915 | None:intergenic | 45.0% |
| !! | GCTCTAACTGGTTTGAGCTA+AGG | - | chr1.4:59713908-59713927 | MS.gene40022:CDS | 45.0% |
| !!! | CTTTGCTGTGAGTGCTGTTT+TGG | - | chr1.4:59715859-59715878 | MS.gene40022:CDS | 45.0% |
| !!! | TGAGTGCTGTTTTGGAGGAA+GGG | - | chr1.4:59715867-59715886 | MS.gene40022:CDS | 45.0% |
| AACGGTGCATGGTAGATAGC+AGG | - | chr1.4:59714638-59714657 | MS.gene40022:intron | 50.0% | |
| AACTCCCGAACTTGGTTCAG+AGG | - | chr1.4:59715136-59715155 | MS.gene40022:intron | 50.0% | |
| AAGGCATAGTGACCAACAGC+AGG | + | chr1.4:59715485-59715504 | None:intergenic | 50.0% | |
| AGAGCTTGAGTACCATCTGG+AGG | - | chr1.4:59715733-59715752 | MS.gene40022:intron | 50.0% | |
| AGTACACCAGGAACATCCCA+AGG | + | chr1.4:59714930-59714949 | None:intergenic | 50.0% | |
| ATTCGGCCTAAGGGTAGTGA+AGG | + | chr1.4:59715504-59715523 | None:intergenic | 50.0% | |
| ATTGTTGCTCGTGGAGGAGA+AGG | - | chr1.4:59715224-59715243 | MS.gene40022:intron | 50.0% | |
| ATTTGACAATGCGGGGGATC+GGG | - | chr1.4:59713883-59713902 | MS.gene40022:CDS | 50.0% | |
| CAGCAAAGATAGGAACACCC+TGG | + | chr1.4:59715847-59715866 | None:intergenic | 50.0% | |
| CATAGAACGCACGAAGGTTC+TGG | - | chr1.4:59715631-59715650 | MS.gene40022:CDS | 50.0% | |
| CCGCAGTCGACATGATAGAA+AGG | - | chr1.4:59713805-59713824 | MS.gene40022:CDS | 50.0% | |
| CTCGGCAGATTTAGACCCTT+GGG | - | chr1.4:59714911-59714930 | MS.gene40022:CDS | 50.0% | |
| GAACCTTCGTGCGTTCTATG+TGG | + | chr1.4:59715631-59715650 | None:intergenic | 50.0% | |
| GACTATCAAGGATGGCCGAT+TGG | + | chr1.4:59715765-59715784 | None:intergenic | 50.0% | |
| GAGCTTGAGTACCATCTGGA+GGG | - | chr1.4:59715734-59715753 | MS.gene40022:intron | 50.0% | |
| GATTTGACAATGCGGGGGAT+CGG | - | chr1.4:59713882-59713901 | MS.gene40022:CDS | 50.0% | |
| GCACACCAAAATCGTGGACT+TGG | - | chr1.4:59715590-59715609 | MS.gene40022:intron | 50.0% | |
| GGGATACCAGAGCTTAAAGC+TGG | - | chr1.4:59715887-59715906 | MS.gene40022:CDS | 50.0% | |
| GTACACCAGGAACATCCCAA+GGG | + | chr1.4:59714929-59714948 | None:intergenic | 50.0% | |
| TAATGTAGGTGGCAGTGGTG+GGG | - | chr1.4:59714476-59714495 | MS.gene40022:CDS | 50.0% | |
| TCAGTGACACTAACGGTGCA+TGG | - | chr1.4:59714627-59714646 | MS.gene40022:intron | 50.0% | |
| TGGAAGTAGAACCATCGCGA+GGG | + | chr1.4:59714971-59714990 | None:intergenic | 50.0% | |
| TTAGACCCTTGGGATGTTCC+TGG | - | chr1.4:59714921-59714940 | MS.gene40022:CDS | 50.0% | |
| TTGGAAGTAGAACCATCGCG+AGG | + | chr1.4:59714972-59714991 | None:intergenic | 50.0% | |
| ! | AAGGGTGCACACCAAAATCG+TGG | - | chr1.4:59715584-59715603 | MS.gene40022:intron | 50.0% |
| ! | GCTGCTTTACCGGGAAGAAA+AGG | - | chr1.4:59715674-59715693 | MS.gene40022:CDS | 50.0% |
| ! | TCTGGCTTATGTGGTAGACG+TGG | - | chr1.4:59715649-59715668 | MS.gene40022:CDS | 50.0% |
| !! | CACGAAGGTTCTGGCTTATG+TGG | - | chr1.4:59715640-59715659 | MS.gene40022:CDS | 50.0% |
| !! | GATTGATGAGGAAGGTGCTG+AGG | - | chr1.4:59715793-59715812 | MS.gene40022:intron | 50.0% |
| !! | GCAAGCTTAGACTTGCTGTG+AGG | + | chr1.4:59713591-59713610 | None:intergenic | 50.0% |
| !!! | GTGAGTGCTGTTTTGGAGGA+AGG | - | chr1.4:59715866-59715885 | MS.gene40022:CDS | 50.0% |
| !!! | TGCTGTGAGTGCTGTTTTGG+AGG | - | chr1.4:59715862-59715881 | MS.gene40022:CDS | 50.0% |
| AGTAGAACCATCGCGAGGGT+CGG | + | chr1.4:59714967-59714986 | None:intergenic | 55.0% | |
| CCAAGGGTCTAAATCTGCCG+AGG | + | chr1.4:59714913-59714932 | None:intergenic | 55.0% | |
| CCTCGGCAGATTTAGACCCT+TGG | - | chr1.4:59714910-59714929 | MS.gene40022:CDS | 55.0% | |
| GGAGGTCTTGGGTTCAAACC+CGG | - | chr1.4:59713942-59713961 | MS.gene40022:CDS | 55.0% | |
| GTCTAAGCTTGCCCCTTTGC+AGG | - | chr1.4:59713599-59713618 | MS.gene40022:CDS | 55.0% | |
| TAGGAAGCCTCCGACTACGA+AGG | - | chr1.4:59715280-59715299 | MS.gene40022:intron | 55.0% | |
| TCGAGAGCTAAGCCTGCTGT+TGG | - | chr1.4:59715470-59715489 | MS.gene40022:intron | 55.0% | |
| TGGGATGAAGAGCAGCCAGT+AGG | + | chr1.4:59715029-59715048 | None:intergenic | 55.0% | |
| TGTACCCCTGCCTTCGTAGT+CGG | + | chr1.4:59715293-59715312 | None:intergenic | 55.0% | |
| TTCGTAGTCGGAGGCTTCCT+AGG | + | chr1.4:59715281-59715300 | None:intergenic | 55.0% | |
| !! | AGACGTGGCTGCTGCTTTAC+CGG | - | chr1.4:59715664-59715683 | MS.gene40022:CDS | 55.0% |
| !! | AGGAACCAGGGGTGCTGATA+AGG | - | chr1.4:59714694-59714713 | MS.gene40022:intron | 55.0% |
| AAGCCTCCGACTACGAAGGC+AGG | - | chr1.4:59715284-59715303 | MS.gene40022:intron | 60.0% | |
| AGCCTCCGACTACGAAGGCA+GGG | - | chr1.4:59715285-59715304 | MS.gene40022:intron | 60.0% | |
| CGTGGAGGAGAAGGTGGTCT+CGG | - | chr1.4:59715233-59715252 | MS.gene40022:intron | 60.0% | |
| GATCATTCCGACCCTCGCGA+TGG | - | chr1.4:59714957-59714976 | MS.gene40022:CDS | 60.0% | |
| GCGCCACATAGAACGCACGA+AGG | - | chr1.4:59715625-59715644 | MS.gene40022:CDS | 60.0% | |
| GTTGCTCGTGGAGGAGAAGG+TGG | - | chr1.4:59715227-59715246 | MS.gene40022:intron | 60.0% | |
| !! | GACGTGGCTGCTGCTTTACC+GGG | - | chr1.4:59715665-59715684 | MS.gene40022:CDS | 60.0% |
| !! | GGGGATCGGGTAGCTCTAAC+TGG | - | chr1.4:59713896-59713915 | MS.gene40022:CDS | 60.0% |
| ACCCCTGCCTTCGTAGTCGG+AGG | + | chr1.4:59715290-59715309 | None:intergenic | 65.0% | |
| GCCTCCGACTACGAAGGCAG+GGG | - | chr1.4:59715286-59715305 | MS.gene40022:intron | 65.0% | |
| ! | ATGTCGACTGCGGCGAGAGC+TGG | + | chr1.4:59713798-59713817 | None:intergenic | 65.0% |
| ! | GTAGGTGGCAGTGGTGGGGT+AGG | - | chr1.4:59714480-59714499 | MS.gene40022:CDS | 65.0% |
| ! | GGTGGCAGTGGTGGGGTAGG+TGG | - | chr1.4:59714483-59714502 | MS.gene40022:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 59713486 | 59715976 | 59713486 | ID=MS.gene40022 |
| chr1.4 | mRNA | 59713486 | 59715976 | 59713486 | ID=MS.gene40022.t1;Parent=MS.gene40022 |
| chr1.4 | exon | 59715842 | 59715976 | 59715842 | ID=MS.gene40022.t1.exon1;Parent=MS.gene40022.t1 |
| chr1.4 | CDS | 59715842 | 59715976 | 59715842 | ID=cds.MS.gene40022.t1;Parent=MS.gene40022.t1 |
| chr1.4 | exon | 59715623 | 59715731 | 59715623 | ID=MS.gene40022.t1.exon2;Parent=MS.gene40022.t1 |
| chr1.4 | CDS | 59715623 | 59715731 | 59715623 | ID=cds.MS.gene40022.t1;Parent=MS.gene40022.t1 |
| chr1.4 | exon | 59714896 | 59714978 | 59714896 | ID=MS.gene40022.t1.exon3;Parent=MS.gene40022.t1 |
| chr1.4 | CDS | 59714896 | 59714978 | 59714896 | ID=cds.MS.gene40022.t1;Parent=MS.gene40022.t1 |
| chr1.4 | exon | 59714747 | 59714809 | 59714747 | ID=MS.gene40022.t1.exon4;Parent=MS.gene40022.t1 |
| chr1.4 | CDS | 59714747 | 59714809 | 59714747 | ID=cds.MS.gene40022.t1;Parent=MS.gene40022.t1 |
| chr1.4 | exon | 59713486 | 59714628 | 59713486 | ID=MS.gene40022.t1.exon5;Parent=MS.gene40022.t1 |
| chr1.4 | CDS | 59713486 | 59714628 | 59713486 | ID=cds.MS.gene40022.t1;Parent=MS.gene40022.t1 |
| Gene Sequence |
| Protein sequence |
