Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40921.t1 | XP_003602659.1 | 90.9 | 386 | 31 | 2 | 8 | 392 | 1 | 383 | 6.50E-201 | 709.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40921.t1 | Q94AQ6 | 71.0 | 372 | 106 | 1 | 21 | 392 | 4 | 373 | 3.5e-155 | 549.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40921.t1 | G8A1N0 | 90.9 | 386 | 31 | 2 | 8 | 392 | 1 | 383 | 4.7e-201 | 709.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049257 | MS.gene40921 | 0.882457 | 1.02E-70 | -1.69E-46 |
| MS.gene049633 | MS.gene40921 | 0.823913 | 1.07E-53 | -1.69E-46 |
| MS.gene050170 | MS.gene40921 | 0.849048 | 4.15E-60 | -1.69E-46 |
| MS.gene050338 | MS.gene40921 | -0.802637 | 5.10E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene40921 | 0.811002 | 8.70E-51 | -1.69E-46 |
| MS.gene05081 | MS.gene40921 | 0.848133 | 7.44E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene40921 | 0.84031 | 9.39E-58 | -1.69E-46 |
| MS.gene051317 | MS.gene40921 | 0.816845 | 4.48E-52 | -1.69E-46 |
| MS.gene051838 | MS.gene40921 | 0.862043 | 6.70E-64 | -1.69E-46 |
| MS.gene052494 | MS.gene40921 | -0.805037 | 1.62E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene40921 | 0.81969 | 1.02E-52 | -1.69E-46 |
| MS.gene053479 | MS.gene40921 | 0.803991 | 2.68E-49 | -1.69E-46 |
| MS.gene053480 | MS.gene40921 | 0.813767 | 2.17E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene40921 | 0.83213 | 1.13E-55 | -1.69E-46 |
| MS.gene054343 | MS.gene40921 | 0.820838 | 5.55E-53 | -1.69E-46 |
| MS.gene054344 | MS.gene40921 | 0.839484 | 1.54E-57 | -1.69E-46 |
| MS.gene05470 | MS.gene40921 | 0.84697 | 1.55E-59 | -1.69E-46 |
| MS.gene054884 | MS.gene40921 | -0.821308 | 4.33E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene40921 | 0.801949 | 7.07E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene40921 | 0.831478 | 1.63E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene40921 | 0.825851 | 3.74E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene40921 | 0.863628 | 2.17E-64 | -1.69E-46 |
| MS.gene056266 | MS.gene40921 | 0.836405 | 9.54E-57 | -1.69E-46 |
| MS.gene056283 | MS.gene40921 | 0.809173 | 2.16E-50 | -1.69E-46 |
| MS.gene056387 | MS.gene40921 | 0.843427 | 1.41E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene40921 | 0.809222 | 2.10E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene40921 | 0.802492 | 5.47E-49 | -1.69E-46 |
| MS.gene057332 | MS.gene40921 | 0.824537 | 7.65E-54 | -1.69E-46 |
| MS.gene057658 | MS.gene40921 | 0.852731 | 3.81E-61 | -1.69E-46 |
| MS.gene058418 | MS.gene40921 | -0.811954 | 5.41E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene40921 | 0.843887 | 1.06E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene40921 | 0.850914 | 1.25E-60 | -1.69E-46 |
| MS.gene05914 | MS.gene40921 | 0.82346 | 1.37E-53 | -1.69E-46 |
| MS.gene05960 | MS.gene40921 | -0.826435 | 2.72E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene40921 | 0.835961 | 1.24E-56 | -1.69E-46 |
| MS.gene06027 | MS.gene40921 | 0.830478 | 2.87E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene40921 | 0.822852 | 1.90E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene40921 | 0.804003 | 2.66E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene40921 | 0.823228 | 1.55E-53 | -1.69E-46 |
| MS.gene061044 | MS.gene40921 | -0.801626 | 8.24E-49 | -1.69E-46 |
| MS.gene061231 | MS.gene40921 | 0.853223 | 2.75E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63929 | MS.gene40921 | PPI |
| MS.gene40921 | MS.gene93729 | PPI |
| MS.gene046213 | MS.gene40921 | PPI |
| MS.gene88462 | MS.gene40921 | PPI |
| MS.gene039628 | MS.gene40921 | PPI |
| MS.gene61079 | MS.gene40921 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40921.t1 | MTR_3g096710 | 90.933 | 386 | 31 | 2 | 8 | 392 | 1 | 383 | 0.0 | 707 |
| MS.gene40921.t1 | MTR_3g096710 | 89.911 | 337 | 30 | 2 | 8 | 343 | 1 | 334 | 0.0 | 634 |
| MS.gene40921.t1 | MTR_3g096710 | 89.881 | 336 | 30 | 2 | 8 | 342 | 1 | 333 | 0.0 | 632 |
| MS.gene40921.t1 | MTR_3g096710 | 88.475 | 295 | 30 | 2 | 8 | 301 | 1 | 292 | 0.0 | 550 |
| MS.gene40921.t1 | MTR_3g096710 | 92.181 | 243 | 19 | 0 | 101 | 343 | 14 | 256 | 1.65e-171 | 479 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene40921.t1 | AT5G09230 | 70.968 | 372 | 106 | 1 | 21 | 392 | 4 | 373 | 0.0 | 560 |
| MS.gene40921.t1 | AT5G09230 | 70.968 | 372 | 106 | 1 | 21 | 392 | 4 | 373 | 0.0 | 560 |
| MS.gene40921.t1 | AT5G09230 | 70.968 | 372 | 106 | 1 | 21 | 392 | 7 | 376 | 0.0 | 560 |
| MS.gene40921.t1 | AT5G09230 | 74.000 | 350 | 91 | 0 | 43 | 392 | 5 | 354 | 0.0 | 555 |
| MS.gene40921.t1 | AT5G09230 | 69.350 | 323 | 97 | 1 | 21 | 343 | 4 | 324 | 6.02e-171 | 480 |
| MS.gene40921.t1 | AT5G09230 | 80.000 | 245 | 49 | 0 | 148 | 392 | 27 | 271 | 4.82e-149 | 422 |
| MS.gene40921.t1 | AT5G09230 | 80.000 | 245 | 49 | 0 | 148 | 392 | 27 | 271 | 4.82e-149 | 422 |
Find 101 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGATACCTATCGACATTT+TGG | 0.150792 | 3.2:+80687848 | None:intergenic |
| GGCAGAAGCAATTGAAAATT+TGG | 0.197656 | 3.2:-80686451 | MS.gene40921:CDS |
| AATTGCTGACCTTTGGATTA+AGG | 0.201173 | 3.2:+80687613 | None:intergenic |
| TGGCTCACCTGGTGGGTTAT+TGG | 0.229869 | 3.2:+80688619 | None:intergenic |
| CCTAATGGTGCTTATAGTTC+TGG | 0.247110 | 3.2:-80688649 | MS.gene40921:CDS |
| GCCGAGCCAGGAGGAGATAT+TGG | 0.270807 | 3.2:-80687978 | MS.gene40921:CDS |
| TCTTTGTAGAAGCTTATTTC+AGG | 0.271782 | 3.2:-80687649 | MS.gene40921:CDS |
| TGAGAACACCATTGCACTTC+TGG | 0.276909 | 3.2:+80686319 | None:intergenic |
| TCGTTTACCGGGAAGGTTCC+GGG | 0.277593 | 3.2:+80689191 | None:intergenic |
| ATACAGAAGGTTGACATCTT+TGG | 0.302545 | 3.2:+80689103 | None:intergenic |
| GATATAAACCGTCCTCCTTT+TGG | 0.309502 | 3.2:+80689263 | None:intergenic |
| ACAGTCCCATGTAATTCTAA+TGG | 0.310751 | 3.2:+80687705 | None:intergenic |
| GCCATATCGGCTCTTTCCTT+TGG | 0.319141 | 3.2:+80685147 | None:intergenic |
| TAATGTCATGAGGGATAAAA+AGG | 0.331600 | 3.2:-80689153 | MS.gene40921:CDS |
| ATCGTTTACCGGGAAGGTTC+CGG | 0.336419 | 3.2:+80689190 | None:intergenic |
| ATTATTTATTTCAGCCCTAA+TGG | 0.338167 | 3.2:-80688664 | MS.gene40921:intron |
| ATTGCTGACCTTTGGATTAA+GGG | 0.339352 | 3.2:+80687614 | None:intergenic |
| ATCTGCTGCTCATTGTGCTT+TGG | 0.346640 | 3.2:-80687911 | MS.gene40921:CDS |
| CCAGAACTATAAGCACCATT+AGG | 0.359965 | 3.2:+80688649 | None:intergenic |
| CATTGCACTTCTGGCAGGTT+GGG | 0.375793 | 3.2:+80686328 | None:intergenic |
| TCCAAAGGAAAGAGCCGATA+TGG | 0.377429 | 3.2:-80685148 | MS.gene40921:CDS |
| AGATGCTTCCATTGCCATAT+CGG | 0.402207 | 3.2:+80685134 | None:intergenic |
| TTGGATTAAGGGACTTCAAC+TGG | 0.402388 | 3.2:+80687625 | None:intergenic |
| CTGCTAGGAACTATTATAAC+AGG | 0.405024 | 3.2:-80689422 | MS.gene40921:intron |
| TGTCTGACCCAGGGCTTCCA+TGG | 0.409403 | 3.2:+80686427 | None:intergenic |
| GGGTAACCATAAAATCAATT+CGG | 0.413467 | 3.2:+80687869 | None:intergenic |
| ATTATGAAGGTTGTCTTCTT+CGG | 0.414780 | 3.2:-80685180 | MS.gene40921:intron |
| CAGTCCCATGTAATTCTAAT+GGG | 0.420290 | 3.2:+80687706 | None:intergenic |
| CACAGGGCAGCTCATGAGGC+TGG | 0.421023 | 3.2:-80684878 | MS.gene40921:intron |
| CAGAACTATAAGCACCATTA+GGG | 0.432825 | 3.2:+80688650 | None:intergenic |
| CCCAATATCTCCTCCTGGCT+CGG | 0.435419 | 3.2:+80687977 | None:intergenic |
| AGGCAGAACCTTCTATAGTC+AGG | 0.437249 | 3.2:+80688920 | None:intergenic |
| CCGAGCCAGGAGGAGATATT+GGG | 0.437495 | 3.2:-80687977 | MS.gene40921:CDS |
| CTCCTTGTATTGACTGGAGC+TGG | 0.441040 | 3.2:-80688965 | MS.gene40921:CDS |
| AGGTTGACATCTTTGGTAGT+AGG | 0.442715 | 3.2:+80689110 | None:intergenic |
| TTGAAAATCAATGCACGATT+GGG | 0.448631 | 3.2:-80684800 | MS.gene40921:CDS |
| TATTGGGCTAGAAGCTATGC+TGG | 0.460514 | 3.2:-80687961 | MS.gene40921:CDS |
| TTCTTCGTTCAAGCCGAGCC+AGG | 0.462937 | 3.2:-80687990 | MS.gene40921:CDS |
| AATTTGGACCATGGAAGCCC+TGG | 0.472279 | 3.2:-80686435 | MS.gene40921:CDS |
| TTGGCAGCTTTCGAGAAAGC+TGG | 0.476655 | 3.2:-80687892 | MS.gene40921:CDS |
| CCTGGGTCAGACAAAAGCTT+TGG | 0.483143 | 3.2:-80686417 | MS.gene40921:CDS |
| ACCAAGCTCCTTGTATTGAC+TGG | 0.492188 | 3.2:-80688971 | MS.gene40921:CDS |
| CCATTGCACTTCTGGCAGGT+TGG | 0.492755 | 3.2:+80686327 | None:intergenic |
| AACTTTGAGCTGTTGAACTC+AGG | 0.496037 | 3.2:+80689297 | None:intergenic |
| TGCAGTCCTTTGTATTTGCA+AGG | 0.496432 | 3.2:-80689448 | MS.gene40921:intron |
| GATCCCATGTCAAGTACTCT+TGG | 0.502273 | 3.2:+80684667 | None:intergenic |
| CGTTTACCGGGAAGGTTCCG+GGG | 0.502356 | 3.2:+80689192 | None:intergenic |
| TGAGTTCAACAGCTCAAAGT+TGG | 0.507220 | 3.2:-80689295 | MS.gene40921:CDS |
| AACACCATTGCACTTCTGGC+AGG | 0.512011 | 3.2:+80686323 | None:intergenic |
| GTGCCTTTGGCTCACCTGGT+GGG | 0.513441 | 3.2:+80688612 | None:intergenic |
| GTGGTATCCCTGACTATAGA+AGG | 0.513648 | 3.2:-80688928 | MS.gene40921:intron |
| GTAGTAGGAGGATCTGCATC+AGG | 0.514883 | 3.2:+80689125 | None:intergenic |
| AGTTGCCCATTAGAATTACA+TGG | 0.518703 | 3.2:-80687711 | MS.gene40921:CDS |
| TTCAGGCTGCACCATCGAGC+TGG | 0.518999 | 3.2:-80687735 | MS.gene40921:intron |
| TCAATCTCAATATCACCATC+AGG | 0.519126 | 3.2:+80686381 | None:intergenic |
| AGTTGGAACTTAGCACCAAA+AGG | 0.533341 | 3.2:-80689278 | MS.gene40921:CDS |
| GCACTTCTGGCAGGTTGGGA+TGG | 0.534673 | 3.2:+80686332 | None:intergenic |
| TTCCAGCTCCAGTCAATACA+AGG | 0.535675 | 3.2:+80688963 | None:intergenic |
| CTTGAAAATCAATGCACGAT+TGG | 0.538004 | 3.2:-80684801 | MS.gene40921:CDS |
| GCAATTGAAAATTTGGACCA+TGG | 0.538406 | 3.2:-80686444 | MS.gene40921:CDS |
| TCCAGTCAATACAAGGAGCT+TGG | 0.539077 | 3.2:+80688970 | None:intergenic |
| TCTAGCCCAATATCTCCTCC+TGG | 0.545671 | 3.2:+80687972 | None:intergenic |
| TTGACATCTTTGGTAGTAGG+AGG | 0.555544 | 3.2:+80689113 | None:intergenic |
| GCTACTGCAATCGTCAATGT+AGG | 0.564103 | 3.2:-80684851 | MS.gene40921:CDS |
| CTTACGATGAGAGAGGAAGA+AGG | 0.565615 | 3.2:+80689651 | None:intergenic |
| GTATTTGCAAGGAAACTGCT+AGG | 0.568484 | 3.2:-80689437 | MS.gene40921:CDS |
| AATCAATGCACGATTGGGTG+AGG | 0.568540 | 3.2:-80684795 | MS.gene40921:intron |
| TTACACAGCAGGGACGCTGA+TGG | 0.576090 | 3.2:+80684645 | None:intergenic |
| CTTCGGTGATAATGTTCCAA+AGG | 0.576117 | 3.2:-80685163 | MS.gene40921:CDS |
| TGGTTACCCAAAATGTCGAT+AGG | 0.577299 | 3.2:-80687855 | MS.gene40921:intron |
| ACTGTAATTTGTATAGATTG+TGG | 0.577480 | 3.2:-80687678 | MS.gene40921:CDS |
| TCATGTCGAATCTCTGCCCC+CGG | 0.578244 | 3.2:-80689209 | MS.gene40921:CDS |
| GGCAGAACCTTCTATAGTCA+GGG | 0.579622 | 3.2:+80688921 | None:intergenic |
| CTAGAAGCTATGCTGGGTGG+AGG | 0.585143 | 3.2:-80687954 | MS.gene40921:CDS |
| AAAGCACAATGAGCAGCAGA+TGG | 0.598287 | 3.2:+80687913 | None:intergenic |
| GTTTACCGGGAAGGTTCCGG+GGG | 0.606936 | 3.2:+80689193 | None:intergenic |
| GGAAAGAGCCGATATGGCAA+TGG | 0.608710 | 3.2:-80685142 | MS.gene40921:CDS |
| ATTTGGACCATGGAAGCCCT+GGG | 0.613997 | 3.2:-80686434 | MS.gene40921:CDS |
| AAGCTCAGACTAATGTCATG+AGG | 0.614735 | 3.2:-80689163 | MS.gene40921:CDS |
| AGCTCAGACTAATGTCATGA+GGG | 0.617233 | 3.2:-80689162 | MS.gene40921:CDS |
| ATGGGCAACTACCAGCTCGA+TGG | 0.623152 | 3.2:+80687724 | None:intergenic |
| GTTGAAGTCCCTTAATCCAA+AGG | 0.626611 | 3.2:-80687622 | MS.gene40921:intron |
| GACAAGTCGAAAAGCAGACA+TGG | 0.628662 | 3.2:+80685068 | None:intergenic |
| AAAGCTTTGGAATGAAACAA+AGG | 0.629664 | 3.2:-80686404 | MS.gene40921:CDS |
| CAGTTTCCTTGCAAATACAA+AGG | 0.631321 | 3.2:+80689442 | None:intergenic |
| GGAACCTTCCCGGTAAACGA+TGG | 0.634258 | 3.2:-80689188 | MS.gene40921:CDS |
| GGAATGAAACAAAGGCCTGA+TGG | 0.637139 | 3.2:-80686396 | MS.gene40921:CDS |
| CCAACCTGCCAGAAGTGCAA+TGG | 0.637167 | 3.2:-80686327 | MS.gene40921:CDS |
| GTTGCCCATTAGAATTACAT+GGG | 0.644261 | 3.2:-80687710 | MS.gene40921:CDS |
| ATTGGGCTAGAAGCTATGCT+GGG | 0.649223 | 3.2:-80687960 | MS.gene40921:CDS |
| GCTGGAATCAGTACAGAATG+TGG | 0.649750 | 3.2:-80688947 | MS.gene40921:CDS |
| TGAAATCGAAAATAATAACA+TGG | 0.651297 | 3.2:+80689680 | None:intergenic |
| ACTTAGCACCAAAAGGAGGA+CGG | 0.658830 | 3.2:-80689271 | MS.gene40921:CDS |
| AAGGGGACTTACGATGAGAG+AGG | 0.659916 | 3.2:+80689644 | None:intergenic |
| TTTCAGACCAATAACCCACC+AGG | 0.665283 | 3.2:-80688626 | MS.gene40921:intron |
| TTCGTTCAAGCCGAGCCAGG+AGG | 0.674610 | 3.2:-80687987 | MS.gene40921:CDS |
| ATTGCCAAGAGTACTTGACA+TGG | 0.677222 | 3.2:-80684671 | MS.gene40921:CDS |
| TTGCCAAGAGTACTTGACAT+GGG | 0.680131 | 3.2:-80684670 | MS.gene40921:CDS |
| TGGAACTTAGCACCAAAAGG+AGG | 0.686371 | 3.2:-80689275 | MS.gene40921:CDS |
| GGGCTAGAAGCTATGCTGGG+TGG | 0.690768 | 3.2:-80687957 | MS.gene40921:CDS |
| ATGAGCAGCAGATGGCTGTG+CGG | 0.691254 | 3.2:+80687921 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAAATTTCTTAAATATTA+TGG | - | chr3.2:80685884-80685903 | MS.gene40921:intron | 10.0% |
| !! | AATTAACCTAATAATAATGA+TGG | + | chr3.2:80685440-80685459 | None:intergenic | 15.0% |
| !! | ACATTTATATTGAAGATTTA+TGG | - | chr3.2:80686142-80686161 | MS.gene40921:intron | 15.0% |
| !! | ACTAAAATTTATTATCATTG+AGG | - | chr3.2:80685588-80685607 | MS.gene40921:intron | 15.0% |
| !! | GGTTAATTGAATTATTTATT+TGG | - | chr3.2:80685452-80685471 | MS.gene40921:intron | 15.0% |
| !! | TAATATGTTATTATGTAGAA+AGG | - | chr3.2:80686852-80686871 | MS.gene40921:intron | 15.0% |
| !! | TTAGAGATATAAACAAAAAA+AGG | + | chr3.2:80685518-80685537 | None:intergenic | 15.0% |
| !!! | AATATAGTTCTGATATAAAT+TGG | + | chr3.2:80688621-80688640 | None:intergenic | 15.0% |
| !!! | AATTATCAATTCATTTTGTT+GGG | + | chr3.2:80685801-80685820 | None:intergenic | 15.0% |
| !!! | ATAATTAACTTGTAATAACT+GGG | - | chr3.2:80688127-80688146 | MS.gene40921:intron | 15.0% |
| !!! | ATGAATTGATAATTAATGAA+AGG | - | chr3.2:80685807-80685826 | MS.gene40921:intron | 15.0% |
| !!! | TAATTATCAATTCATTTTGT+TGG | + | chr3.2:80685802-80685821 | None:intergenic | 15.0% |
| !!! | TAGAAAGTATAAAAAAGAAA+AGG | - | chr3.2:80688360-80688379 | MS.gene40921:intron | 15.0% |
| !!! | TCTTATATTTTAGTATGTTA+CGG | - | chr3.2:80688707-80688726 | MS.gene40921:intron | 15.0% |
| !!! | TGTATGATTTTTTTGAAAAA+AGG | - | chr3.2:80685238-80685257 | MS.gene40921:intron | 15.0% |
| !! | AAAAGTAGAAAGAAATGTAT+AGG | - | chr3.2:80687371-80687390 | MS.gene40921:intron | 20.0% |
| !! | AAGTAAATGATAAATGCAAA+AGG | + | chr3.2:80687261-80687280 | None:intergenic | 20.0% |
| !! | AATTATGAAGAACAATAATC+TGG | + | chr3.2:80688113-80688132 | None:intergenic | 20.0% |
| !! | AATTGATCATGATAAATAAC+TGG | + | chr3.2:80686497-80686516 | None:intergenic | 20.0% |
| !! | AGGTATTTACAAAATTACAT+AGG | - | chr3.2:80689278-80689297 | MS.gene40921:CDS | 20.0% |
| !! | ATGAATAGAGAAATATTACT+GGG | - | chr3.2:80689000-80689019 | MS.gene40921:intron | 20.0% |
| !! | GAGCTAAATATACAATAAAA+TGG | + | chr3.2:80684806-80684825 | None:intergenic | 20.0% |
| !! | TATGAATAGAGAAATATTAC+TGG | - | chr3.2:80688999-80689018 | MS.gene40921:intron | 20.0% |
| !! | TCTCTTTGACATTATTTAAA+AGG | - | chr3.2:80686307-80686326 | MS.gene40921:intron | 20.0% |
| !! | TGAGATTAATATAAGTCATT+TGG | + | chr3.2:80684727-80684746 | None:intergenic | 20.0% |
| !! | TTAAAGGATTGATAAAATGA+AGG | + | chr3.2:80687748-80687767 | None:intergenic | 20.0% |
| !! | TTAAATAATGTCAAAGAGAA+AGG | + | chr3.2:80686306-80686325 | None:intergenic | 20.0% |
| !! | TTAATTAGTACTTTGTGAAT+CGG | - | chr3.2:80687329-80687348 | MS.gene40921:intron | 20.0% |
| !! | TTTCAAAAAAATCATACAGA+AGG | + | chr3.2:80685236-80685255 | None:intergenic | 20.0% |
| !!! | ACTTGCTTATTTTTATTGTT+GGG | - | chr3.2:80685744-80685763 | MS.gene40921:intron | 20.0% |
| !!! | ATAGAATAAAAGTTGTTGTT+TGG | - | chr3.2:80685979-80685998 | MS.gene40921:intron | 20.0% |
| !!! | ATATTGCAGATATTTTTCTT+TGG | + | chr3.2:80685911-80685930 | None:intergenic | 20.0% |
| !!! | ATTATCAATTCATTTTGTTG+GGG | + | chr3.2:80685800-80685819 | None:intergenic | 20.0% |
| !!! | ATTATGGGATAGTTTTTAAA+TGG | - | chr3.2:80688391-80688410 | MS.gene40921:intron | 20.0% |
| !!! | CATAATTAACTTGTAATAAC+TGG | - | chr3.2:80688126-80688145 | MS.gene40921:intron | 20.0% |
| !!! | CTTATATTTTAGTATGTTAC+GGG | - | chr3.2:80688708-80688727 | MS.gene40921:intron | 20.0% |
| !!! | GATAGTTTTTAAATGGTTTT+GGG | - | chr3.2:80688398-80688417 | MS.gene40921:intron | 20.0% |
| !!! | TAATTAACTTGTAATAACTG+GGG | - | chr3.2:80688128-80688147 | MS.gene40921:intron | 20.0% |
| !!! | TAGAATAAAAGTTGTTGTTT+GGG | - | chr3.2:80685980-80685999 | MS.gene40921:intron | 20.0% |
| !!! | TATCGGTAGTTATTTTATAT+TGG | - | chr3.2:80688293-80688312 | MS.gene40921:intron | 20.0% |
| !!! | TTCTAAATTGTATTTTCACA+GGG | - | chr3.2:80689429-80689448 | MS.gene40921:CDS | 20.0% |
| !!! | TTTCTAAATTGTATTTTCAC+AGG | - | chr3.2:80689428-80689447 | MS.gene40921:CDS | 20.0% |
| ! | AAACATAGTCATGAAAACTA+AGG | - | chr3.2:80686209-80686228 | MS.gene40921:intron | 25.0% |
| ! | AACCTAATAATAATGATGGT+AGG | + | chr3.2:80685436-80685455 | None:intergenic | 25.0% |
| ! | AATATGAAGGGTAAAAACAA+AGG | - | chr3.2:80688239-80688258 | MS.gene40921:intron | 25.0% |
| ! | AGATAAGACATAATGATTCT+TGG | - | chr3.2:80686907-80686926 | MS.gene40921:intron | 25.0% |
| ! | AGATGAATGCACAATATAAA+TGG | + | chr3.2:80688801-80688820 | None:intergenic | 25.0% |
| ! | ATTATTTATTTCAGCCCTAA+TGG | - | chr3.2:80685659-80685678 | MS.gene40921:intron | 25.0% |
| ! | CAGAGAAATTAGATCATTAA+TGG | + | chr3.2:80687309-80687328 | None:intergenic | 25.0% |
| ! | CTCTTACACAAAAATATGAA+GGG | - | chr3.2:80688227-80688246 | MS.gene40921:intron | 25.0% |
| ! | GAGATTGAAAATGAAAAAGA+TGG | + | chr3.2:80684992-80685011 | None:intergenic | 25.0% |
| ! | TCTCAGGAAATATGTTTAAT+AGG | - | chr3.2:80687613-80687632 | MS.gene40921:intron | 25.0% |
| ! | TCTCTTACACAAAAATATGA+AGG | - | chr3.2:80688226-80688245 | MS.gene40921:intron | 25.0% |
| ! | TGATAGTTCACAAATACAAT+AGG | - | chr3.2:80685767-80685786 | MS.gene40921:intron | 25.0% |
| ! | TGCTACAATTGGTTATTTAA+TGG | - | chr3.2:80685860-80685879 | MS.gene40921:intron | 25.0% |
| ! | TTAAATAACCAATTGTAGCA+TGG | + | chr3.2:80685860-80685879 | None:intergenic | 25.0% |
| ! | TTCCTACCATCATTATTATT+AGG | - | chr3.2:80685431-80685450 | MS.gene40921:intron | 25.0% |
| ! | TTGACTGTCATTAATTATGA+AGG | - | chr3.2:80689130-80689149 | MS.gene40921:CDS | 25.0% |
| !! | ACTGTAATTTGTATAGATTG+TGG | - | chr3.2:80686645-80686664 | MS.gene40921:intron | 25.0% |
| !! | CTATCATTTTGTGTTAGTTA+TGG | - | chr3.2:80687179-80687198 | MS.gene40921:intron | 25.0% |
| !! | GGATAGTTTTTAAATGGTTT+TGG | - | chr3.2:80688397-80688416 | MS.gene40921:intron | 25.0% |
| !! | TGAGATTGACGAAAAATTTT+GGG | - | chr3.2:80687956-80687975 | MS.gene40921:CDS | 25.0% |
| !! | TTGAGATTGACGAAAAATTT+TGG | - | chr3.2:80687955-80687974 | MS.gene40921:CDS | 25.0% |
| !!! | ATATTTTTACTTTGTCTGTG+AGG | - | chr3.2:80689373-80689392 | MS.gene40921:intron | 25.0% |
| !!! | GACTTGCTTATTTTTATTGT+TGG | - | chr3.2:80685743-80685762 | MS.gene40921:intron | 25.0% |
| !!! | GCAATTTGCGTTTATTTTAT+TGG | - | chr3.2:80686727-80686746 | MS.gene40921:intron | 25.0% |
| !!! | TAGAAACTGACTTTTATTGA+TGG | + | chr3.2:80688577-80688596 | None:intergenic | 25.0% |
| !!! | TTAGTTTTCATGACTATGTT+TGG | + | chr3.2:80686210-80686229 | None:intergenic | 25.0% |
| !!! | TTGTGTTATATCTTGTTTTC+AGG | - | chr3.2:80686571-80686590 | MS.gene40921:intron | 25.0% |
| AATCTGGCACAAAATAAACA+GGG | + | chr3.2:80688097-80688116 | None:intergenic | 30.0% | |
| ACAAGATATAACACAACTCA+AGG | + | chr3.2:80686567-80686586 | None:intergenic | 30.0% | |
| AGTTTCACATCTTGAGAATA+TGG | - | chr3.2:80685557-80685576 | MS.gene40921:intron | 30.0% | |
| AGTTTGTAAATCTGATAGAG+TGG | - | chr3.2:80688177-80688196 | MS.gene40921:intron | 30.0% | |
| ATATAACACAACTCAAGGAT+AGG | + | chr3.2:80686562-80686581 | None:intergenic | 30.0% | |
| ATGATCAATTAAGCCTTCTT+AGG | - | chr3.2:80686507-80686526 | MS.gene40921:intron | 30.0% | |
| ATTATGAAGGTTGTCTTCTT+CGG | - | chr3.2:80689143-80689162 | MS.gene40921:CDS | 30.0% | |
| ATTGCTTGCAAGATTAAAGA+TGG | + | chr3.2:80687552-80687571 | None:intergenic | 30.0% | |
| CAAAAATCAGAAGAAACTTG+TGG | + | chr3.2:80687806-80687825 | None:intergenic | 30.0% | |
| CAATCCTTTAACGTAATAGT+TGG | - | chr3.2:80687757-80687776 | MS.gene40921:intron | 30.0% | |
| CATGAAAACTAAGGAATTCA+AGG | - | chr3.2:80686218-80686237 | MS.gene40921:intron | 30.0% | |
| CTAACATATGTTCATCCTTA+TGG | - | chr3.2:80685534-80685553 | MS.gene40921:intron | 30.0% | |
| CTTAAACTCAAATACTACGA+TGG | + | chr3.2:80686279-80686298 | None:intergenic | 30.0% | |
| GATATTTGCATCTTGACAAA+AGG | - | chr3.2:80686015-80686034 | MS.gene40921:intron | 30.0% | |
| GGGTAACCATAAAATCAATT+CGG | + | chr3.2:80686457-80686476 | None:intergenic | 30.0% | |
| GTTAATGTGGAAACAAGAAA+AGG | + | chr3.2:80684937-80684956 | None:intergenic | 30.0% | |
| TAAGACATAATGATTCTTGG+TGG | - | chr3.2:80686910-80686929 | MS.gene40921:intron | 30.0% | |
| TAATCTGGCACAAAATAAAC+AGG | + | chr3.2:80688098-80688117 | None:intergenic | 30.0% | |
| TAATGTCATGAGGGATAAAA+AGG | - | chr3.2:80685170-80685189 | MS.gene40921:CDS | 30.0% | |
| TCTTTGTAGAAGCTTATTTC+AGG | - | chr3.2:80686674-80686693 | MS.gene40921:intron | 30.0% | |
| TGCTTCTTTCAGTTATATGT+CGG | - | chr3.2:80688046-80688065 | MS.gene40921:intron | 30.0% | |
| TGTTTCTTCAAGCTAAATCA+TGG | + | chr3.2:80688944-80688963 | None:intergenic | 30.0% | |
| TTCAAACTGAAATTCAGTCA+AGG | + | chr3.2:80685324-80685343 | None:intergenic | 30.0% | |
| TTGAAAATCAATGCACGATT+GGG | - | chr3.2:80689523-80689542 | MS.gene40921:intron | 30.0% | |
| TTGAAGATTTATGGCAATGA+CGG | - | chr3.2:80686151-80686170 | MS.gene40921:intron | 30.0% | |
| TTTAGATACCATGCTACAAT+TGG | - | chr3.2:80685849-80685868 | MS.gene40921:intron | 30.0% | |
| ! | ATAAGTACATGGTGTGTTTT+TGG | - | chr3.2:80688906-80688925 | MS.gene40921:intron | 30.0% |
| ! | GAAATTACTTGCTGCATATT+TGG | - | chr3.2:80689395-80689414 | MS.gene40921:intron | 30.0% |
| ! | GCAACAGTTTGTTCAAATTT+GGG | + | chr3.2:80689621-80689640 | None:intergenic | 30.0% |
| ! | GTTGTTTGGGTTAATTGAAT+AGG | - | chr3.2:80685993-80686012 | MS.gene40921:intron | 30.0% |
| ! | TCACTTTCTCAACGTATTTT+TGG | - | chr3.2:80685268-80685287 | MS.gene40921:intron | 30.0% |
| ! | TGCAACAGTTTGTTCAAATT+TGG | + | chr3.2:80689622-80689641 | None:intergenic | 30.0% |
| !! | AAAGCTTTGGAATGAAACAA+AGG | - | chr3.2:80687919-80687938 | MS.gene40921:CDS | 30.0% |
| !! | ACTTGTTTGACTTCTTTTTG+TGG | - | chr3.2:80688266-80688285 | MS.gene40921:intron | 30.0% |
| !! | ATAAGAGTATTGTTCTCTGA+TGG | - | chr3.2:80687204-80687223 | MS.gene40921:intron | 30.0% |
| !! | GATGATAGTTGTAGTTTGTT+AGG | - | chr3.2:80686932-80686951 | MS.gene40921:intron | 30.0% |
| !!! | AATCGTGCATTGATTTTCAA+GGG | + | chr3.2:80689523-80689542 | None:intergenic | 30.0% |
| !!! | AGTTTTTAAATGGTTTTGGG+AGG | - | chr3.2:80688401-80688420 | MS.gene40921:intron | 30.0% |
| !!! | GATAGAGGCAGATTATTTTT+TGG | - | chr3.2:80687150-80687169 | MS.gene40921:intron | 30.0% |
| !!! | GTTTTTAAATGGTTTTGGGA+GGG | - | chr3.2:80688402-80688421 | MS.gene40921:intron | 30.0% |
| AACAGGAAAAATAGTTGCCA+AGG | + | chr3.2:80688743-80688762 | None:intergenic | 35.0% | |
| AACAGTCTCTTAAGTTTCTC+AGG | - | chr3.2:80687597-80687616 | MS.gene40921:intron | 35.0% | |
| AATAAAGCAGAGAGTAAGGA+AGG | + | chr3.2:80684960-80684979 | None:intergenic | 35.0% | |
| AATTGCTGACCTTTGGATTA+AGG | + | chr3.2:80686713-80686732 | None:intergenic | 35.0% | |
| ACAGTCCCATGTAATTCTAA+TGG | + | chr3.2:80686621-80686640 | None:intergenic | 35.0% | |
| AGAAAAGGAGAACGTGATTA+TGG | - | chr3.2:80688375-80688394 | MS.gene40921:intron | 35.0% | |
| AGAGAAGTTAAACAGTGTAG+TGG | - | chr3.2:80687102-80687121 | MS.gene40921:intron | 35.0% | |
| AGCTCCAACTATTACGTTAA+AGG | + | chr3.2:80687764-80687783 | None:intergenic | 35.0% | |
| AGTTGCCCATTAGAATTACA+TGG | - | chr3.2:80686612-80686631 | MS.gene40921:intron | 35.0% | |
| ATAAAGCAGAGAGTAAGGAA+GGG | + | chr3.2:80684959-80684978 | None:intergenic | 35.0% | |
| ATACAGAAGGTTGACATCTT+TGG | + | chr3.2:80685223-80685242 | None:intergenic | 35.0% | |
| ATATCTCGAGTATCCTAAGA+AGG | + | chr3.2:80686523-80686542 | None:intergenic | 35.0% | |
| ATCAGGTCTCTCAAATTTCT+TGG | - | chr3.2:80688458-80688477 | MS.gene40921:intron | 35.0% | |
| ATGTGATCAGAAGTGATAAG+TGG | + | chr3.2:80687645-80687664 | None:intergenic | 35.0% | |
| ATGTGGAAACAAGAAAAGGA+AGG | + | chr3.2:80684933-80684952 | None:intergenic | 35.0% | |
| ATTGCTGACCTTTGGATTAA+GGG | + | chr3.2:80686712-80686731 | None:intergenic | 35.0% | |
| ATTTGGATTGAGAAAGAGAG+AGG | + | chr3.2:80684710-80684729 | None:intergenic | 35.0% | |
| CAGAACTATAAGCACCATTA+GGG | + | chr3.2:80685676-80685695 | None:intergenic | 35.0% | |
| CAGTCCCATGTAATTCTAAT+GGG | + | chr3.2:80686620-80686639 | None:intergenic | 35.0% | |
| CAGTTACGTATAGCAGTTAT+TGG | - | chr3.2:80688319-80688338 | MS.gene40921:intron | 35.0% | |
| CAGTTTCCTTGCAAATACAA+AGG | + | chr3.2:80684884-80684903 | None:intergenic | 35.0% | |
| CTAATATGTGGTCTTTCAAC+TGG | - | chr3.2:80687669-80687688 | MS.gene40921:CDS | 35.0% | |
| CTGCTAGGAACTATTATAAC+AGG | - | chr3.2:80684901-80684920 | MS.gene40921:intron | 35.0% | |
| CTTATTAAGCTAGCAACACA+TGG | - | chr3.2:80689050-80689069 | MS.gene40921:intron | 35.0% | |
| CTTGAAAATCAATGCACGAT+TGG | - | chr3.2:80689522-80689541 | MS.gene40921:intron | 35.0% | |
| GAAAAGGAGAACGTGATTAT+GGG | - | chr3.2:80688376-80688395 | MS.gene40921:intron | 35.0% | |
| GAGAAGTTAAACAGTGTAGT+GGG | - | chr3.2:80687103-80687122 | MS.gene40921:intron | 35.0% | |
| GCAATTGAAAATTTGGACCA+TGG | - | chr3.2:80687879-80687898 | MS.gene40921:CDS | 35.0% | |
| GGCAGAAGCAATTGAAAATT+TGG | - | chr3.2:80687872-80687891 | MS.gene40921:CDS | 35.0% | |
| GTACTTATGTCAGAAGAGAT+AGG | + | chr3.2:80688894-80688913 | None:intergenic | 35.0% | |
| GTGAAATAAAGCAGAGAGTA+AGG | + | chr3.2:80684964-80684983 | None:intergenic | 35.0% | |
| GTGTAAGAGAGATACAGTTA+GGG | + | chr3.2:80688216-80688235 | None:intergenic | 35.0% | |
| GTTGCCCATTAGAATTACAT+GGG | - | chr3.2:80686613-80686632 | MS.gene40921:intron | 35.0% | |
| TAAGAACATCCAGAATGCAA+CGG | + | chr3.2:80688692-80688711 | None:intergenic | 35.0% | |
| TAATGATGGTAGGAAGTAAG+AGG | + | chr3.2:80685426-80685445 | None:intergenic | 35.0% | |
| TAGTGGGAGTCAGTTATATA+GGG | - | chr3.2:80687119-80687138 | MS.gene40921:intron | 35.0% | |
| TCAAGATGTGAAACTCCATA+AGG | + | chr3.2:80685552-80685571 | None:intergenic | 35.0% | |
| TCAATCTCAATATCACCATC+AGG | + | chr3.2:80687945-80687964 | None:intergenic | 35.0% | |
| TCTCTTCTGACATAAGTACA+TGG | - | chr3.2:80688895-80688914 | MS.gene40921:intron | 35.0% | |
| TGTAAGAGAGATACAGTTAG+GGG | + | chr3.2:80688215-80688234 | None:intergenic | 35.0% | |
| TGTGTAAGAGAGATACAGTT+AGG | + | chr3.2:80688217-80688236 | None:intergenic | 35.0% | |
| ! | AACATTGTGTTCTAAACCAG+TGG | - | chr3.2:80687850-80687869 | MS.gene40921:intron | 35.0% |
| ! | ACATTGTGTTCTAAACCAGT+GGG | - | chr3.2:80687851-80687870 | MS.gene40921:intron | 35.0% |
| ! | CGGTTTATATCTTTTAAGCG+CGG | - | chr3.2:80685072-80685091 | MS.gene40921:CDS | 35.0% |
| ! | CTCTAAAAGTGAAGATTGCA+TGG | - | chr3.2:80685492-80685511 | MS.gene40921:intron | 35.0% |
| ! | CTTCTTTTTGTGGCAGTTAT+CGG | - | chr3.2:80688276-80688295 | MS.gene40921:intron | 35.0% |
| ! | GATTGACGAAAAATTTTGGG+AGG | - | chr3.2:80687959-80687978 | MS.gene40921:CDS | 35.0% |
| ! | GTGATGCTTTTCTTGTACTA+GGG | - | chr3.2:80689219-80689238 | MS.gene40921:CDS | 35.0% |
| ! | TGGATACCTATCGACATTTT+GGG | + | chr3.2:80686477-80686496 | None:intergenic | 35.0% |
| ! | TGTCGGTTATTTGTATTGAG+TGG | - | chr3.2:80688063-80688082 | MS.gene40921:intron | 35.0% |
| ! | TGTGATGCTTTTCTTGTACT+AGG | - | chr3.2:80689218-80689237 | MS.gene40921:CDS | 35.0% |
| !! | CTATTTTTCCTGTTTGGCTT+TGG | - | chr3.2:80688749-80688768 | MS.gene40921:intron | 35.0% |
| !! | TGGCAACTATTTTTCCTGTT+TGG | - | chr3.2:80688743-80688762 | MS.gene40921:intron | 35.0% |
| !!! | CAATCGTGCATTGATTTTCA+AGG | + | chr3.2:80689524-80689543 | None:intergenic | 35.0% |
| AAACGCAAATTGCTGACCTT+TGG | + | chr3.2:80686720-80686739 | None:intergenic | 40.0% | |
| AACCATTTGGAAGCTTTCAC+TGG | + | chr3.2:80687445-80687464 | None:intergenic | 40.0% | |
| AACTTTGAGCTGTTGAACTC+AGG | + | chr3.2:80685029-80685048 | None:intergenic | 40.0% | |
| AAGCTCAGACTAATGTCATG+AGG | - | chr3.2:80685160-80685179 | MS.gene40921:CDS | 40.0% | |
| AGAGTAAGGAAGGGTTAATG+TGG | + | chr3.2:80684950-80684969 | None:intergenic | 40.0% | |
| AGATGCTTCCATTGCCATAT+CGG | + | chr3.2:80689192-80689211 | None:intergenic | 40.0% | |
| AGCATAAACCCGTTGAATAC+TGG | + | chr3.2:80687016-80687035 | None:intergenic | 40.0% | |
| AGCTCAGACTAATGTCATGA+GGG | - | chr3.2:80685161-80685180 | MS.gene40921:CDS | 40.0% | |
| AGCTTGAAGAAACAGACTAC+AGG | - | chr3.2:80688950-80688969 | MS.gene40921:CDS | 40.0% | |
| AGTTGGAACTTAGCACCAAA+AGG | - | chr3.2:80685045-80685064 | MS.gene40921:intron | 40.0% | |
| ATCCAGTGAAAGCTTCCAAA+TGG | - | chr3.2:80687440-80687459 | MS.gene40921:intron | 40.0% | |
| ATCCGAACACTGTCACTAAA+GGG | + | chr3.2:80689304-80689323 | None:intergenic | 40.0% | |
| ATGCTTGAACTAGACGGAAT+AGG | - | chr3.2:80687031-80687050 | MS.gene40921:intron | 40.0% | |
| ATTTATGGCAATGACGGTGA+AGG | - | chr3.2:80686157-80686176 | MS.gene40921:intron | 40.0% | |
| CCAGAACTATAAGCACCATT+AGG | + | chr3.2:80685677-80685696 | None:intergenic | 40.0% | |
| CCTAATGGTGCTTATAGTTC+TGG | - | chr3.2:80685674-80685693 | MS.gene40921:intron | 40.0% | |
| GATCACATGCGTCTAATATG+TGG | - | chr3.2:80687657-80687676 | MS.gene40921:CDS | 40.0% | |
| GGAAAAATAGTTGCCAAGGA+AGG | + | chr3.2:80688739-80688758 | None:intergenic | 40.0% | |
| GGGTTTATGCTTGAACTAGA+CGG | - | chr3.2:80687025-80687044 | MS.gene40921:intron | 40.0% | |
| GTATGGCTTGAAAAGTGATC+TGG | - | chr3.2:80689550-80689569 | MS.gene40921:intron | 40.0% | |
| GTATTTGCAAGGAAACTGCT+AGG | - | chr3.2:80684886-80684905 | MS.gene40921:intron | 40.0% | |
| GTGAAAGCTTCCAAATGGTT+TGG | - | chr3.2:80687445-80687464 | MS.gene40921:intron | 40.0% | |
| GTTGAAGTCCCTTAATCCAA+AGG | - | chr3.2:80686701-80686720 | MS.gene40921:intron | 40.0% | |
| TATTGTTCTCTGATGGAGCT+TGG | - | chr3.2:80687211-80687230 | MS.gene40921:intron | 40.0% | |
| TGAAAACATTGATGTGCGCT+CGG | - | chr3.2:80688838-80688857 | MS.gene40921:intron | 40.0% | |
| TGAGTTCAACAGCTCAAAGT+TGG | - | chr3.2:80685028-80685047 | MS.gene40921:intron | 40.0% | |
| TGCAGTCCTTTGTATTTGCA+AGG | - | chr3.2:80684875-80684894 | MS.gene40921:CDS | 40.0% | |
| TGGTTACCCAAAATGTCGAT+AGG | - | chr3.2:80686468-80686487 | MS.gene40921:intron | 40.0% | |
| TGTTCTCTTGAAGTATAGCG+CGG | - | chr3.2:80688647-80688666 | MS.gene40921:CDS | 40.0% | |
| TTGGATTAAGGGACTTCAAC+TGG | + | chr3.2:80686701-80686720 | None:intergenic | 40.0% | |
| TTTATGGCAATGACGGTGAA+GGG | - | chr3.2:80686158-80686177 | MS.gene40921:intron | 40.0% | |
| ! | AGGTTGACATCTTTGGTAGT+AGG | + | chr3.2:80685216-80685235 | None:intergenic | 40.0% |
| ! | CTGGATACCTATCGACATTT+TGG | + | chr3.2:80686478-80686497 | None:intergenic | 40.0% |
| ! | CTTCCAAATGGTTTGGACTT+CGG | - | chr3.2:80687452-80687471 | MS.gene40921:intron | 40.0% |
| ! | CTTCGGTGATAATGTTCCAA+AGG | - | chr3.2:80689160-80689179 | MS.gene40921:CDS | 40.0% |
| ! | GATATAAACCGTCCTCCTTT+TGG | + | chr3.2:80685063-80685082 | None:intergenic | 40.0% |
| ! | GTAGTGGGAGTCAGTTATAT+AGG | - | chr3.2:80687118-80687137 | MS.gene40921:intron | 40.0% |
| ! | GTTTGTTGGGATTATCCATG+AGG | - | chr3.2:80687068-80687087 | MS.gene40921:intron | 40.0% |
| ! | TGAGCTTTTCCATCGTTTAC+CGG | + | chr3.2:80685147-80685166 | None:intergenic | 40.0% |
| ! | TTCCAAATGGTTTGGACTTC+GGG | - | chr3.2:80687453-80687472 | MS.gene40921:intron | 40.0% |
| ! | TTGACATCTTTGGTAGTAGG+AGG | + | chr3.2:80685213-80685232 | None:intergenic | 40.0% |
| !! | AGCTGGCCGAATTGATTTTA+TGG | - | chr3.2:80686448-80686467 | MS.gene40921:CDS | 40.0% |
| !! | ATTGCCAAGAGTACTTGACA+TGG | - | chr3.2:80689652-80689671 | MS.gene40921:intron | 40.0% |
| !! | TGACGAAAAATTTTGGGAGG+AGG | - | chr3.2:80687962-80687981 | MS.gene40921:CDS | 40.0% |
| !! | TTGCCAAGAGTACTTGACAT+GGG | - | chr3.2:80689653-80689672 | MS.gene40921:intron | 40.0% |
| AAAGCACAATGAGCAGCAGA+TGG | + | chr3.2:80686413-80686432 | None:intergenic | 45.0% | |
| AACCCGTTGAATACTGGACT+AGG | + | chr3.2:80687010-80687029 | None:intergenic | 45.0% | |
| AATCAATGCACGATTGGGTG+AGG | - | chr3.2:80689528-80689547 | MS.gene40921:intron | 45.0% | |
| AATTCTTGGAGGGAGAGATC+AGG | - | chr3.2:80688441-80688460 | MS.gene40921:intron | 45.0% | |
| ACCCGTTGAATACTGGACTA+GGG | + | chr3.2:80687009-80687028 | None:intergenic | 45.0% | |
| ACTTAGCACCAAAAGGAGGA+CGG | - | chr3.2:80685052-80685071 | MS.gene40921:intron | 45.0% | |
| AGAAAGAGAGAGGAGGAGAA+GGG | + | chr3.2:80684700-80684719 | None:intergenic | 45.0% | |
| AGACCGATCTCTCGAATTCT+TGG | - | chr3.2:80688427-80688446 | MS.gene40921:intron | 45.0% | |
| AGGCAGAACCTTCTATAGTC+AGG | + | chr3.2:80685406-80685425 | None:intergenic | 45.0% | |
| ATCTGCTGCTCATTGTGCTT+TGG | - | chr3.2:80686412-80686431 | MS.gene40921:CDS | 45.0% | |
| ATGAGAGAAGTGGGCCAAAT+GGG | - | chr3.2:80686962-80686981 | MS.gene40921:intron | 45.0% | |
| CAGAATGCAACGGAACAAAC+AGG | + | chr3.2:80688682-80688701 | None:intergenic | 45.0% | |
| CATCCGAACACTGTCACTAA+AGG | + | chr3.2:80689305-80689324 | None:intergenic | 45.0% | |
| CCTCCAAGAATTCGAGAGAT+CGG | + | chr3.2:80688433-80688452 | None:intergenic | 45.0% | |
| CGATCTCTCGAATTCTTGGA+GGG | - | chr3.2:80688431-80688450 | MS.gene40921:intron | 45.0% | |
| CGATCTGACGATCAAAGTCA+TGG | - | chr3.2:80686816-80686835 | MS.gene40921:intron | 45.0% | |
| CTGTTTGTTCCGTTGCATTC+TGG | - | chr3.2:80688680-80688699 | MS.gene40921:intron | 45.0% | |
| CTTACGATGAGAGAGGAAGA+AGG | + | chr3.2:80684675-80684694 | None:intergenic | 45.0% | |
| GAAGAGATAGGTCAGCATCA+AGG | + | chr3.2:80688882-80688901 | None:intergenic | 45.0% | |
| GAAGCAAGATGACCTACATC+AGG | + | chr3.2:80688032-80688051 | None:intergenic | 45.0% | |
| GACAAGTCGAAAAGCAGACA+TGG | + | chr3.2:80689258-80689277 | None:intergenic | 45.0% | |
| GATCCCATGTCAAGTACTCT+TGG | + | chr3.2:80689659-80689678 | None:intergenic | 45.0% | |
| GCTACTGCAATCGTCAATGT+AGG | - | chr3.2:80689472-80689491 | MS.gene40921:intron | 45.0% | |
| GCTGGAATCAGTACAGAATG+TGG | - | chr3.2:80685376-80685395 | MS.gene40921:intron | 45.0% | |
| GCTTGAAAAGTGATCTGGAC+TGG | - | chr3.2:80689555-80689574 | MS.gene40921:intron | 45.0% | |
| GGAATAGGAAAGAGCAGAGT+GGG | - | chr3.2:80687046-80687065 | MS.gene40921:intron | 45.0% | |
| GGAATGAAACAAAGGCCTGA+TGG | - | chr3.2:80687927-80687946 | MS.gene40921:CDS | 45.0% | |
| GGCAGAACCTTCTATAGTCA+GGG | + | chr3.2:80685405-80685424 | None:intergenic | 45.0% | |
| GGTGTTCTCAAACCTGATGT+AGG | - | chr3.2:80688017-80688036 | MS.gene40921:intron | 45.0% | |
| GTGGTATCCCTGACTATAGA+AGG | - | chr3.2:80685395-80685414 | MS.gene40921:intron | 45.0% | |
| GTGGTCTTTCAACTGGAAGT+TGG | - | chr3.2:80687676-80687695 | MS.gene40921:CDS | 45.0% | |
| GTTACGGGATTATCCTTCCT+TGG | - | chr3.2:80688723-80688742 | MS.gene40921:intron | 45.0% | |
| TACCCGAAGTCCAAACCATT+TGG | + | chr3.2:80687458-80687477 | None:intergenic | 45.0% | |
| TAGTCTAGCCAAAGCCAAAC+AGG | + | chr3.2:80688760-80688779 | None:intergenic | 45.0% | |
| TATAGGGACTGAAGCGATAG+AGG | - | chr3.2:80687135-80687154 | MS.gene40921:intron | 45.0% | |
| TATGAGAGAAGTGGGCCAAA+TGG | - | chr3.2:80686961-80686980 | MS.gene40921:intron | 45.0% | |
| TCCAAAGGAAAGAGCCGATA+TGG | - | chr3.2:80689175-80689194 | MS.gene40921:CDS | 45.0% | |
| TCCAGTCAATACAAGGAGCT+TGG | + | chr3.2:80685356-80685375 | None:intergenic | 45.0% | |
| TCGGATGAACGAGAGAGATT+TGG | - | chr3.2:80689318-80689337 | MS.gene40921:intron | 45.0% | |
| TGAGAACACCATTGCACTTC+TGG | + | chr3.2:80688007-80688026 | None:intergenic | 45.0% | |
| TGGAACTTAGCACCAAAAGG+AGG | - | chr3.2:80685048-80685067 | MS.gene40921:intron | 45.0% | |
| TGGACTTCGGGTAACATTAC+TGG | - | chr3.2:80687465-80687484 | MS.gene40921:intron | 45.0% | |
| TGGATTGAGAAAGAGAGAGG+AGG | + | chr3.2:80684707-80684726 | None:intergenic | 45.0% | |
| TTATGGCAATGACGGTGAAG+GGG | - | chr3.2:80686159-80686178 | MS.gene40921:intron | 45.0% | |
| TTCCAGCTCCAGTCAATACA+AGG | + | chr3.2:80685363-80685382 | None:intergenic | 45.0% | |
| TTGGCCCACTTCTCTCATAT+GGG | + | chr3.2:80686960-80686979 | None:intergenic | 45.0% | |
| TTTCAATTGCTTCTGCCCAC+TGG | + | chr3.2:80687869-80687888 | None:intergenic | 45.0% | |
| TTTCAGACCAATAACCCACC+AGG | - | chr3.2:80685697-80685716 | MS.gene40921:intron | 45.0% | |
| TTTGGCCCACTTCTCTCATA+TGG | + | chr3.2:80686961-80686980 | None:intergenic | 45.0% | |
| ! | AAAGAGCAGAGTGGGTTTGT+TGG | - | chr3.2:80687054-80687073 | MS.gene40921:intron | 45.0% |
| ! | AAGAGCAGAGTGGGTTTGTT+GGG | - | chr3.2:80687055-80687074 | MS.gene40921:intron | 45.0% |
| ! | ACCAAGCTCCTTGTATTGAC+TGG | - | chr3.2:80685352-80685371 | MS.gene40921:intron | 45.0% |
| ! | ATTGGGCTAGAAGCTATGCT+GGG | - | chr3.2:80686363-80686382 | MS.gene40921:CDS | 45.0% |
| ! | CAAAGCTTTTGTCTGACCCA+GGG | + | chr3.2:80687908-80687927 | None:intergenic | 45.0% |
| ! | GAGCTTTTCCATCGTTTACC+GGG | + | chr3.2:80685146-80685165 | None:intergenic | 45.0% |
| ! | TATCTTTTAAGCGCGGTGCA+AGG | - | chr3.2:80685079-80685098 | MS.gene40921:CDS | 45.0% |
| ! | TATTGGGCTAGAAGCTATGC+TGG | - | chr3.2:80686362-80686381 | MS.gene40921:CDS | 45.0% |
| ! | TTTTCCATCGTTTACCGGGA+AGG | + | chr3.2:80685142-80685161 | None:intergenic | 45.0% |
| !! | TGTCTGCTTTTCGACTTGTC+AGG | - | chr3.2:80689258-80689277 | MS.gene40921:CDS | 45.0% |
| !!! | TTAATTAATTAATTGTTTTA+TGG | + | chr3.2:80684777-80684796 | None:intergenic | 5.0% |
| AACACCATTGCACTTCTGGC+AGG | + | chr3.2:80688003-80688022 | None:intergenic | 50.0% | |
| AAGGGGACTTACGATGAGAG+AGG | + | chr3.2:80684682-80684701 | None:intergenic | 50.0% | |
| AATTTGGACCATGGAAGCCC+TGG | - | chr3.2:80687888-80687907 | MS.gene40921:CDS | 50.0% | |
| AGGACCCCATATGAGAGAAG+TGG | - | chr3.2:80686952-80686971 | MS.gene40921:intron | 50.0% | |
| AGTCTAGTTGACCGTGCCTT+TGG | + | chr3.2:80685727-80685746 | None:intergenic | 50.0% | |
| ATCGTTTACCGGGAAGGTTC+CGG | + | chr3.2:80685136-80685155 | None:intergenic | 50.0% | |
| ATGCACGATTGGGTGAGGTA+TGG | - | chr3.2:80689533-80689552 | MS.gene40921:intron | 50.0% | |
| ATTTGGACCATGGAAGCCCT+GGG | - | chr3.2:80687889-80687908 | MS.gene40921:CDS | 50.0% | |
| CATTGCACTTCTGGCAGGTT+GGG | + | chr3.2:80687998-80688017 | None:intergenic | 50.0% | |
| CCCCCTAGTCCAGTATTCAA+CGG | - | chr3.2:80687004-80687023 | MS.gene40921:intron | 50.0% | |
| CCCCTAGTCCAGTATTCAAC+GGG | - | chr3.2:80687005-80687024 | MS.gene40921:intron | 50.0% | |
| CCGATCTCTCGAATTCTTGG+AGG | - | chr3.2:80688430-80688449 | MS.gene40921:intron | 50.0% | |
| CCTGGGTCAGACAAAAGCTT+TGG | - | chr3.2:80687906-80687925 | MS.gene40921:CDS | 50.0% | |
| CGGAATAGGAAAGAGCAGAG+TGG | - | chr3.2:80687045-80687064 | MS.gene40921:intron | 50.0% | |
| GAAAGAGAGAGGAGGAGAAG+GGG | + | chr3.2:80684699-80684718 | None:intergenic | 50.0% | |
| GAAGTATAGCGCGGCTGAAT+GGG | - | chr3.2:80688656-80688675 | MS.gene40921:intron | 50.0% | |
| GAGAAAGAGAGAGGAGGAGA+AGG | + | chr3.2:80684701-80684720 | None:intergenic | 50.0% | |
| GGAAAGAGCCGATATGGCAA+TGG | - | chr3.2:80689181-80689200 | MS.gene40921:CDS | 50.0% | |
| GGACCCCATATGAGAGAAGT+GGG | - | chr3.2:80686953-80686972 | MS.gene40921:intron | 50.0% | |
| GGCCCTTTAGTGACAGTGTT+CGG | - | chr3.2:80689299-80689318 | MS.gene40921:CDS | 50.0% | |
| GTAGTAGGAGGATCTGCATC+AGG | + | chr3.2:80685201-80685220 | None:intergenic | 50.0% | |
| TATGGCAATGACGGTGAAGG+GGG | - | chr3.2:80686160-80686179 | MS.gene40921:intron | 50.0% | |
| TCTAGCCCAATATCTCCTCC+TGG | + | chr3.2:80686354-80686373 | None:intergenic | 50.0% | |
| TGAAGTATAGCGCGGCTGAA+TGG | - | chr3.2:80688655-80688674 | MS.gene40921:intron | 50.0% | |
| TGCTGTTCTACCAGCCCATT+TGG | + | chr3.2:80686979-80686998 | None:intergenic | 50.0% | |
| TGGCCCACTTCTCTCATATG+GGG | + | chr3.2:80686959-80686978 | None:intergenic | 50.0% | |
| TTGAGAGCAGAAGCTGTCAC+TGG | + | chr3.2:80687412-80687431 | None:intergenic | 50.0% | |
| TTGGCAGCTTTCGAGAAAGC+TGG | - | chr3.2:80686431-80686450 | MS.gene40921:CDS | 50.0% | |
| ! | CCAAAGCTTTTGTCTGACCC+AGG | + | chr3.2:80687909-80687928 | None:intergenic | 50.0% |
| ! | CCCGTTGAATACTGGACTAG+GGG | + | chr3.2:80687008-80687027 | None:intergenic | 50.0% |
| ! | CCGTTGAATACTGGACTAGG+GGG | + | chr3.2:80687007-80687026 | None:intergenic | 50.0% |
| ! | CGTTGAATACTGGACTAGGG+GGG | + | chr3.2:80687006-80687025 | None:intergenic | 50.0% |
| ! | TTTTCACAGGGCAGCTCATG+AGG | - | chr3.2:80689441-80689460 | MS.gene40921:CDS | 50.0% |
| !! | CTCCTTGTATTGACTGGAGC+TGG | - | chr3.2:80685358-80685377 | MS.gene40921:intron | 50.0% |
| !! | GCCATATCGGCTCTTTCCTT+TGG | + | chr3.2:80689179-80689198 | None:intergenic | 50.0% |
| ATGAGCAGCAGATGGCTGTG+CGG | + | chr3.2:80686405-80686424 | None:intergenic | 55.0% | |
| ATGGCAATGACGGTGAAGGG+GGG | - | chr3.2:80686161-80686180 | MS.gene40921:intron | 55.0% | |
| ATGGGCAACTACCAGCTCGA+TGG | + | chr3.2:80686602-80686621 | None:intergenic | 55.0% | |
| CCATTGCACTTCTGGCAGGT+TGG | + | chr3.2:80687999-80688018 | None:intergenic | 55.0% | |
| CCCAATATCTCCTCCTGGCT+CGG | + | chr3.2:80686349-80686368 | None:intergenic | 55.0% | |
| CCGAGCCAGGAGGAGATATT+GGG | - | chr3.2:80686346-80686365 | MS.gene40921:CDS | 55.0% | |
| CTAGAAGCTATGCTGGGTGG+AGG | - | chr3.2:80686369-80686388 | MS.gene40921:CDS | 55.0% | |
| CTCTCTCACTCTCTGCCTCA+TGG | + | chr3.2:80687086-80687105 | None:intergenic | 55.0% | |
| GGAACCTTCCCGGTAAACGA+TGG | - | chr3.2:80685135-80685154 | MS.gene40921:CDS | 55.0% | |
| TAACCCACCAGGTGAGCCAA+AGG | - | chr3.2:80685708-80685727 | MS.gene40921:intron | 55.0% | |
| TCATGTCGAATCTCTGCCCC+CGG | - | chr3.2:80685114-80685133 | MS.gene40921:CDS | 55.0% | |
| TCGTTTACCGGGAAGGTTCC+GGG | + | chr3.2:80685135-80685154 | None:intergenic | 55.0% | |
| TTACACAGCAGGGACGCTGA+TGG | + | chr3.2:80689681-80689700 | None:intergenic | 55.0% | |
| TTCTTCGTTCAAGCCGAGCC+AGG | - | chr3.2:80686333-80686352 | MS.gene40921:CDS | 55.0% | |
| ! | CCAACCTGCCAGAAGTGCAA+TGG | - | chr3.2:80687996-80688015 | MS.gene40921:CDS | 55.0% |
| !! | CTGATGGAGCTTGGCTCTGT+TGG | - | chr3.2:80687220-80687239 | MS.gene40921:intron | 55.0% |
| !! | TGGCTCACCTGGTGGGTTAT+TGG | + | chr3.2:80685707-80685726 | None:intergenic | 55.0% |
| CACCAGGTGAGCCAAAGGCA+CGG | - | chr3.2:80685713-80685732 | MS.gene40921:intron | 60.0% | |
| CGTTTACCGGGAAGGTTCCG+GGG | + | chr3.2:80685134-80685153 | None:intergenic | 60.0% | |
| GAGAAGTGGGCCAAATGGGC+TGG | - | chr3.2:80686966-80686985 | MS.gene40921:intron | 60.0% | |
| GCCGAGCCAGGAGGAGATAT+TGG | - | chr3.2:80686345-80686364 | MS.gene40921:CDS | 60.0% | |
| GGGCTAGAAGCTATGCTGGG+TGG | - | chr3.2:80686366-80686385 | MS.gene40921:CDS | 60.0% | |
| GTTTACCGGGAAGGTTCCGG+GGG | + | chr3.2:80685133-80685152 | None:intergenic | 60.0% | |
| TGTCTGACCCAGGGCTTCCA+TGG | + | chr3.2:80687899-80687918 | None:intergenic | 60.0% | |
| TTCAGGCTGCACCATCGAGC+TGG | - | chr3.2:80686588-80686607 | MS.gene40921:intron | 60.0% | |
| TTCGTTCAAGCCGAGCCAGG+AGG | - | chr3.2:80686336-80686355 | MS.gene40921:CDS | 60.0% | |
| ! | GCACTTCTGGCAGGTTGGGA+TGG | + | chr3.2:80687994-80688013 | None:intergenic | 60.0% |
| ! | GTGCCTTTGGCTCACCTGGT+GGG | + | chr3.2:80685714-80685733 | None:intergenic | 60.0% |
| CACAGGGCAGCTCATGAGGC+TGG | - | chr3.2:80689445-80689464 | MS.gene40921:CDS | 65.0% | |
| ! | CGTGCCTTTGGCTCACCTGG+TGG | + | chr3.2:80685715-80685734 | None:intergenic | 65.0% |
| ! | GACCGTGCCTTTGGCTCACC+TGG | + | chr3.2:80685718-80685737 | None:intergenic | 65.0% |
| CTCTGCCCCCGGAACCTTCC+CGG | - | chr3.2:80685125-80685144 | MS.gene40921:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 80684645 | 80689700 | 80684645 | ID=MS.gene40921 |
| chr3.2 | mRNA | 80684645 | 80689700 | 80684645 | ID=MS.gene40921.t1;Parent=MS.gene40921 |
| chr3.2 | exon | 80689656 | 80689700 | 80689656 | ID=MS.gene40921.t1.exon1;Parent=MS.gene40921.t1 |
| chr3.2 | CDS | 80689656 | 80689700 | 80689656 | ID=cds.MS.gene40921.t1;Parent=MS.gene40921.t1 |
| chr3.2 | exon | 80689423 | 80689465 | 80689423 | ID=MS.gene40921.t1.exon2;Parent=MS.gene40921.t1 |
| chr3.2 | CDS | 80689423 | 80689465 | 80689423 | ID=cds.MS.gene40921.t1;Parent=MS.gene40921.t1 |
| chr3.2 | exon | 80689086 | 80689329 | 80689086 | ID=MS.gene40921.t1.exon3;Parent=MS.gene40921.t1 |
| chr3.2 | CDS | 80689086 | 80689329 | 80689086 | ID=cds.MS.gene40921.t1;Parent=MS.gene40921.t1 |
| chr3.2 | exon | 80688929 | 80688994 | 80688929 | ID=MS.gene40921.t1.exon4;Parent=MS.gene40921.t1 |
| chr3.2 | CDS | 80688929 | 80688994 | 80688929 | ID=cds.MS.gene40921.t1;Parent=MS.gene40921.t1 |
| chr3.2 | exon | 80688627 | 80688672 | 80688627 | ID=MS.gene40921.t1.exon5;Parent=MS.gene40921.t1 |
| chr3.2 | CDS | 80688627 | 80688672 | 80688627 | ID=cds.MS.gene40921.t1;Parent=MS.gene40921.t1 |
| chr3.2 | exon | 80687856 | 80688016 | 80687856 | ID=MS.gene40921.t1.exon6;Parent=MS.gene40921.t1 |
| chr3.2 | CDS | 80687856 | 80688016 | 80687856 | ID=cds.MS.gene40921.t1;Parent=MS.gene40921.t1 |
| chr3.2 | exon | 80687623 | 80687752 | 80687623 | ID=MS.gene40921.t1.exon7;Parent=MS.gene40921.t1 |
| chr3.2 | CDS | 80687623 | 80687752 | 80687623 | ID=cds.MS.gene40921.t1;Parent=MS.gene40921.t1 |
| chr3.2 | exon | 80686311 | 80686475 | 80686311 | ID=MS.gene40921.t1.exon8;Parent=MS.gene40921.t1 |
| chr3.2 | CDS | 80686311 | 80686475 | 80686311 | ID=cds.MS.gene40921.t1;Parent=MS.gene40921.t1 |
| chr3.2 | exon | 80685066 | 80685193 | 80685066 | ID=MS.gene40921.t1.exon9;Parent=MS.gene40921.t1 |
| chr3.2 | CDS | 80685066 | 80685193 | 80685066 | ID=cds.MS.gene40921.t1;Parent=MS.gene40921.t1 |
| chr3.2 | exon | 80684796 | 80684895 | 80684796 | ID=MS.gene40921.t1.exon10;Parent=MS.gene40921.t1 |
| chr3.2 | CDS | 80684796 | 80684895 | 80684796 | ID=cds.MS.gene40921.t1;Parent=MS.gene40921.t1 |
| chr3.2 | exon | 80684645 | 80684695 | 80684645 | ID=MS.gene40921.t1.exon11;Parent=MS.gene40921.t1 |
| chr3.2 | CDS | 80684645 | 80684695 | 80684645 | ID=cds.MS.gene40921.t1;Parent=MS.gene40921.t1 |
| Gene Sequence |
| Protein sequence |
