Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41840.t1 | XP_003624785.1 | 97.5 | 318 | 8 | 0 | 1 | 318 | 1 | 318 | 3.30E-179 | 637.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41840.t1 | Q54YW1 | 33.0 | 194 | 111 | 3 | 118 | 293 | 362 | 554 | 5.2e-24 | 113.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41840.t1 | G7L2P5 | 97.5 | 318 | 8 | 0 | 1 | 318 | 1 | 318 | 2.4e-179 | 637.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene41840 | 0.814934 | 1.20E-51 | -1.69E-46 |
| MS.gene049283 | MS.gene41840 | 0.83013 | 3.49E-55 | -1.69E-46 |
| MS.gene049419 | MS.gene41840 | -0.803717 | 3.05E-49 | -1.69E-46 |
| MS.gene049452 | MS.gene41840 | 0.819767 | 9.77E-53 | -1.69E-46 |
| MS.gene049499 | MS.gene41840 | 0.808401 | 3.15E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene41840 | 0.845316 | 4.38E-59 | -1.69E-46 |
| MS.gene050654 | MS.gene41840 | 0.815569 | 8.64E-52 | -1.69E-46 |
| MS.gene050941 | MS.gene41840 | 0.812037 | 5.18E-51 | -1.69E-46 |
| MS.gene052118 | MS.gene41840 | 0.811745 | 6.00E-51 | -1.69E-46 |
| MS.gene052534 | MS.gene41840 | 0.805164 | 1.52E-49 | -1.69E-46 |
| MS.gene052674 | MS.gene41840 | 0.819376 | 1.20E-52 | -1.69E-46 |
| MS.gene052675 | MS.gene41840 | 0.815816 | 7.62E-52 | -1.69E-46 |
| MS.gene052677 | MS.gene41840 | 0.814988 | 1.16E-51 | -1.69E-46 |
| MS.gene05350 | MS.gene41840 | 0.804832 | 1.79E-49 | -1.69E-46 |
| MS.gene053726 | MS.gene41840 | 0.806683 | 7.30E-50 | -1.69E-46 |
| MS.gene053931 | MS.gene41840 | 0.811209 | 7.85E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene41840 | 0.801631 | 8.22E-49 | -1.69E-46 |
| MS.gene054641 | MS.gene41840 | 0.805195 | 1.50E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene41840 | 0.831533 | 1.58E-55 | -1.69E-46 |
| MS.gene054893 | MS.gene41840 | 0.833622 | 4.80E-56 | -1.69E-46 |
| MS.gene055513 | MS.gene41840 | 0.804893 | 1.74E-49 | -1.69E-46 |
| MS.gene055841 | MS.gene41840 | 0.801972 | 6.99E-49 | -1.69E-46 |
| MS.gene055864 | MS.gene41840 | 0.813509 | 2.47E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene41840 | 0.812085 | 5.06E-51 | -1.69E-46 |
| MS.gene056699 | MS.gene41840 | 0.823292 | 1.50E-53 | -1.69E-46 |
| MS.gene05686 | MS.gene41840 | 0.81515 | 1.07E-51 | -1.69E-46 |
| MS.gene05690 | MS.gene41840 | 0.802112 | 6.55E-49 | -1.69E-46 |
| MS.gene057034 | MS.gene41840 | 0.822944 | 1.81E-53 | -1.69E-46 |
| MS.gene057174 | MS.gene41840 | 0.803258 | 3.80E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene41840 | 0.838661 | 2.52E-57 | -1.69E-46 |
| MS.gene057371 | MS.gene41840 | 0.808326 | 3.27E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene41840 | 0.81913 | 1.36E-52 | -1.69E-46 |
| MS.gene058081 | MS.gene41840 | 0.808205 | 3.47E-50 | -1.69E-46 |
| MS.gene058095 | MS.gene41840 | 0.837574 | 4.80E-57 | -1.69E-46 |
| MS.gene058159 | MS.gene41840 | 0.800328 | 1.52E-48 | -1.69E-46 |
| MS.gene058429 | MS.gene41840 | 0.818552 | 1.85E-52 | -1.69E-46 |
| MS.gene058781 | MS.gene41840 | 0.803285 | 3.75E-49 | -1.69E-46 |
| MS.gene059283 | MS.gene41840 | 0.814418 | 1.56E-51 | -1.69E-46 |
| MS.gene05952 | MS.gene41840 | 0.819469 | 1.14E-52 | -1.69E-46 |
| MS.gene060435 | MS.gene41840 | 0.810477 | 1.13E-50 | -1.69E-46 |
| MS.gene060522 | MS.gene41840 | 0.815616 | 8.44E-52 | -1.69E-46 |
| MS.gene060527 | MS.gene41840 | 0.804064 | 2.58E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene41840 | 0.806479 | 8.06E-50 | -1.69E-46 |
| MS.gene060850 | MS.gene41840 | 0.831238 | 1.87E-55 | -1.69E-46 |
| MS.gene060851 | MS.gene41840 | 0.817584 | 3.06E-52 | -1.69E-46 |
| MS.gene060852 | MS.gene41840 | 0.817302 | 3.54E-52 | -1.69E-46 |
| MS.gene060932 | MS.gene41840 | 0.826128 | 3.21E-54 | -1.69E-46 |
| MS.gene060935 | MS.gene41840 | 0.810011 | 1.42E-50 | -1.69E-46 |
| MS.gene060937 | MS.gene41840 | 0.818971 | 1.48E-52 | -1.69E-46 |
| MS.gene06121 | MS.gene41840 | 0.802384 | 5.76E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41840.t1 | MTR_7g087440 | 97.484 | 318 | 8 | 0 | 1 | 318 | 1 | 318 | 0.0 | 645 |
| MS.gene41840.t1 | MTR_0258s0040 | 52.809 | 267 | 123 | 1 | 51 | 317 | 7 | 270 | 1.14e-96 | 287 |
| MS.gene41840.t1 | MTR_0258s0040 | 52.612 | 268 | 123 | 2 | 51 | 317 | 7 | 271 | 7.49e-95 | 282 |
| MS.gene41840.t1 | MTR_0258s0040 | 60.748 | 214 | 83 | 1 | 105 | 317 | 19 | 232 | 3.07e-90 | 269 |
| MS.gene41840.t1 | MTR_8g007175 | 55.102 | 245 | 94 | 3 | 80 | 317 | 20 | 255 | 4.25e-89 | 267 |
| MS.gene41840.t1 | MTR_8g007175 | 55.328 | 244 | 93 | 3 | 81 | 317 | 26 | 260 | 8.82e-89 | 266 |
| MS.gene41840.t1 | MTR_7g081300 | 54.008 | 237 | 108 | 1 | 81 | 317 | 29 | 264 | 4.97e-82 | 249 |
| MS.gene41840.t1 | MTR_0258s0040 | 51.653 | 242 | 113 | 2 | 51 | 291 | 7 | 245 | 1.19e-80 | 245 |
| MS.gene41840.t1 | MTR_0258s0040 | 51.653 | 242 | 113 | 2 | 51 | 291 | 23 | 261 | 1.61e-80 | 245 |
| MS.gene41840.t1 | MTR_8g007175 | 56.221 | 217 | 80 | 2 | 81 | 290 | 26 | 234 | 2.32e-80 | 244 |
| MS.gene41840.t1 | MTR_8g007175 | 56.808 | 213 | 77 | 2 | 81 | 286 | 26 | 230 | 8.47e-79 | 240 |
| MS.gene41840.t1 | MTR_3g085460 | 57.895 | 190 | 79 | 1 | 129 | 317 | 1 | 190 | 2.10e-76 | 232 |
| MS.gene41840.t1 | MTR_3g085460 | 57.277 | 213 | 90 | 1 | 106 | 317 | 48 | 260 | 8.88e-76 | 233 |
| MS.gene41840.t1 | MTR_3g085460 | 57.277 | 213 | 90 | 1 | 106 | 317 | 36 | 248 | 1.05e-75 | 233 |
| MS.gene41840.t1 | MTR_7g081300 | 54.369 | 206 | 93 | 1 | 81 | 286 | 29 | 233 | 4.95e-75 | 230 |
| MS.gene41840.t1 | MTR_3g085460 | 58.242 | 182 | 75 | 1 | 106 | 286 | 36 | 217 | 4.79e-62 | 197 |
| MS.gene41840.t1 | MTR_0258s0040 | 50.532 | 188 | 90 | 1 | 51 | 238 | 23 | 207 | 4.87e-61 | 194 |
| MS.gene41840.t1 | MTR_8g007175 | 56.364 | 165 | 57 | 2 | 81 | 238 | 26 | 182 | 2.15e-55 | 179 |
| MS.gene41840.t1 | MTR_3g085460 | 61.194 | 134 | 52 | 0 | 106 | 239 | 36 | 169 | 2.81e-44 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene41840.t1 | AT3G03610 | 70.062 | 324 | 87 | 2 | 1 | 317 | 1 | 321 | 8.11e-170 | 474 |
| MS.gene41840.t1 | AT3G03610 | 70.062 | 324 | 87 | 2 | 1 | 317 | 1 | 321 | 8.11e-170 | 474 |
| MS.gene41840.t1 | AT3G03610 | 70.062 | 324 | 87 | 2 | 1 | 317 | 1 | 321 | 8.11e-170 | 474 |
| MS.gene41840.t1 | AT3G03610 | 70.062 | 324 | 87 | 2 | 1 | 317 | 13 | 333 | 1.00e-169 | 474 |
| MS.gene41840.t1 | AT1G03620 | 56.471 | 255 | 101 | 4 | 70 | 317 | 44 | 295 | 1.38e-93 | 280 |
| MS.gene41840.t1 | AT1G03620 | 58.723 | 235 | 92 | 2 | 84 | 317 | 1 | 231 | 1.54e-93 | 277 |
| MS.gene41840.t1 | AT1G03620 | 58.723 | 235 | 92 | 2 | 84 | 317 | 1 | 231 | 1.54e-93 | 277 |
| MS.gene41840.t1 | AT1G03620 | 58.723 | 235 | 92 | 2 | 84 | 317 | 1 | 231 | 1.54e-93 | 277 |
| MS.gene41840.t1 | AT1G03620 | 58.403 | 238 | 94 | 2 | 81 | 317 | 30 | 263 | 1.97e-93 | 278 |
| MS.gene41840.t1 | AT1G03620 | 58.403 | 238 | 94 | 2 | 81 | 317 | 30 | 263 | 1.97e-93 | 278 |
| MS.gene41840.t1 | AT1G03620 | 58.403 | 238 | 94 | 2 | 81 | 317 | 30 | 263 | 1.97e-93 | 278 |
| MS.gene41840.t1 | AT1G03620 | 58.403 | 238 | 94 | 2 | 81 | 317 | 30 | 263 | 1.97e-93 | 278 |
| MS.gene41840.t1 | AT1G03620 | 58.403 | 238 | 94 | 2 | 81 | 317 | 30 | 263 | 1.97e-93 | 278 |
| MS.gene41840.t1 | AT1G03620 | 58.403 | 238 | 94 | 2 | 81 | 317 | 30 | 263 | 1.97e-93 | 278 |
| MS.gene41840.t1 | AT1G03620 | 58.403 | 238 | 94 | 2 | 81 | 317 | 30 | 263 | 1.97e-93 | 278 |
| MS.gene41840.t1 | AT1G03620 | 58.403 | 238 | 94 | 2 | 81 | 317 | 30 | 263 | 1.97e-93 | 278 |
| MS.gene41840.t1 | AT1G03620 | 58.403 | 238 | 94 | 2 | 81 | 317 | 30 | 263 | 1.97e-93 | 278 |
| MS.gene41840.t1 | AT3G60260 | 56.667 | 240 | 99 | 2 | 80 | 317 | 6 | 242 | 8.20e-91 | 271 |
| MS.gene41840.t1 | AT3G60260 | 57.083 | 240 | 96 | 3 | 81 | 317 | 29 | 264 | 1.01e-90 | 271 |
| MS.gene41840.t1 | AT3G60260 | 57.083 | 240 | 96 | 3 | 81 | 317 | 29 | 264 | 1.01e-90 | 271 |
| MS.gene41840.t1 | AT3G60260 | 57.083 | 240 | 96 | 3 | 81 | 317 | 29 | 264 | 1.01e-90 | 271 |
| MS.gene41840.t1 | AT1G67400 | 59.135 | 208 | 85 | 0 | 110 | 317 | 73 | 280 | 3.81e-88 | 265 |
| MS.gene41840.t1 | AT2G44770 | 55.274 | 237 | 105 | 1 | 81 | 317 | 29 | 264 | 4.50e-87 | 262 |
| MS.gene41840.t1 | AT3G43400 | 62.590 | 139 | 48 | 1 | 152 | 290 | 73 | 207 | 4.21e-55 | 179 |
Find 66 sgRNAs with CRISPR-Local
Find 277 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCAGCAAACATTGTTCT+AGG | 0.245670 | 7.3:+21590793 | MS.gene41840:intron |
| CAGGAACATTTGGATACTTC+TGG | 0.260450 | 7.3:+21589498 | MS.gene41840:CDS |
| TTCATTGAATGAACCGTTGC+TGG | 0.321817 | 7.3:+21589527 | MS.gene41840:CDS |
| ATCAGATTGTTGGAAGGAAA+TGG | 0.322781 | 7.3:+21592227 | MS.gene41840:CDS |
| AGCAAAGCGTGCTACATATA+TGG | 0.332900 | 7.3:+21593677 | MS.gene41840:CDS |
| TGGAAAACGGCAGGAACATT+TGG | 0.381041 | 7.3:+21589488 | MS.gene41840:CDS |
| ACCATGGTTTGCAGGGGTGG+AGG | 0.391694 | 7.3:+21592720 | MS.gene41840:intron |
| CTCCACTTAAATCAGATTGT+TGG | 0.392141 | 7.3:+21592217 | MS.gene41840:CDS |
| CGGCTTGAAGTTCCCTTTGA+CGG | 0.402080 | 7.3:+21591656 | MS.gene41840:CDS |
| GCAAACATTGTTCTAGGGTC+TGG | 0.406999 | 7.3:+21590799 | MS.gene41840:intron |
| TTCGAACCTCATTGCGCAAT+GGG | 0.413507 | 7.3:+21589744 | MS.gene41840:CDS |
| CCATGGTTTGCAGGGGTGGA+GGG | 0.415346 | 7.3:+21592721 | MS.gene41840:intron |
| TTGATTCCAGCTACTGCAAA+TGG | 0.423995 | 7.3:-21592964 | None:intergenic |
| ATTTATGTTGGTGCAGATGC+TGG | 0.425464 | 7.3:+21592993 | MS.gene41840:CDS |
| GAAAGAAGGCGCAAATTCAT+TGG | 0.426457 | 7.3:+21589710 | MS.gene41840:CDS |
| ACACACCTAAAATCTGTTGA+TGG | 0.432758 | 7.3:-21592267 | None:intergenic |
| TCAGATTGTTGGAAGGAAAT+GGG | 0.433239 | 7.3:+21592228 | MS.gene41840:CDS |
| TTCCAACAATCTGATTTAAG+TGG | 0.437679 | 7.3:-21592219 | None:intergenic |
| GCGCAATGGGCACAGTGGTT+AGG | 0.448913 | 7.3:+21589757 | MS.gene41840:CDS |
| GTTGTTCCATCTTCTTCGTC+GGG | 0.460134 | 7.3:+21593564 | MS.gene41840:intron |
| ATCTCTATACATACCTGCAC+AGG | 0.463215 | 7.3:-21590904 | None:intergenic |
| AGTTGTTCCATCTTCTTCGT+CGG | 0.478166 | 7.3:+21593563 | MS.gene41840:intron |
| CTTGTTTGTGCAATAATCGC+TGG | 0.486929 | 7.3:-21592915 | None:intergenic |
| GCTGCTTGAGGAGGATGAAA+TGG | 0.495909 | 7.3:+21593602 | MS.gene41840:CDS |
| TTCCATCGACATCCCCGTGA+TGG | 0.495966 | 7.3:-21589470 | None:intergenic |
| CAGATGCTGGATCTTCAATC+AGG | 0.501555 | 7.3:+21593006 | MS.gene41840:CDS |
| TATGTACACTTGAAGATTTG+TGG | 0.503025 | 7.3:+21589677 | MS.gene41840:CDS |
| GAATATCCATTTGCAGTAGC+TGG | 0.503288 | 7.3:+21592958 | MS.gene41840:CDS |
| CATATTCCCGACGAAGAAGA+TGG | 0.508986 | 7.3:-21593570 | None:intergenic |
| CTCCAGTATAAAAGATATAC+CGG | 0.509227 | 7.3:+21593865 | MS.gene41840:CDS |
| TTGCAGCAAACATTGTTCTA+GGG | 0.514573 | 7.3:+21590794 | MS.gene41840:intron |
| AGTGGAGGAAGCTCTCGGTC+AGG | 0.522963 | 7.3:-21592201 | None:intergenic |
| AATCAATATCTCATTTATGT+TGG | 0.524266 | 7.3:+21592981 | MS.gene41840:CDS |
| CGATTATTGCACAAACAAGA+TGG | 0.527326 | 7.3:+21592919 | MS.gene41840:CDS |
| TCCAACACTTAGCCCTGTGC+AGG | 0.527434 | 7.3:+21590891 | MS.gene41840:CDS |
| ACGGGGATGTCGATGGAAAA+CGG | 0.534153 | 7.3:+21589475 | MS.gene41840:CDS |
| CAACAATCTGATTTAAGTGG+AGG | 0.536607 | 7.3:-21592216 | None:intergenic |
| TGCACAGGGCTAAGTGTTGG+AGG | 0.541071 | 7.3:-21590889 | None:intergenic |
| CTCCATCACGGGGATGTCGA+TGG | 0.541121 | 7.3:+21589468 | MS.gene41840:CDS |
| TTTCGAACCTCATTGCGCAA+TGG | 0.542371 | 7.3:+21589743 | MS.gene41840:CDS |
| ACCTGCACAGGGCTAAGTGT+TGG | 0.548439 | 7.3:-21590892 | None:intergenic |
| ATGGATATTCCCACTCTGCT+CGG | 0.549193 | 7.3:-21592945 | None:intergenic |
| ATGTACACTTGAAGATTTGT+GGG | 0.552958 | 7.3:+21589678 | MS.gene41840:CDS |
| TTACTTGCAAAACAATAGGA+TGG | 0.554335 | 7.3:+21590864 | MS.gene41840:CDS |
| CACACCTAAAATCTGTTGAT+GGG | 0.557506 | 7.3:-21592266 | None:intergenic |
| TGAGGAGAAGACTCCATCAC+GGG | 0.558881 | 7.3:+21589457 | MS.gene41840:CDS |
| CATCTCAACATGTTGTGAGC+CGG | 0.561847 | 7.3:-21593884 | None:intergenic |
| TCATTGAATGAACCGTTGCT+GGG | 0.564464 | 7.3:+21589528 | MS.gene41840:CDS |
| GACTAAGAAACTTAAAGCAA+CGG | 0.573979 | 7.3:+21591636 | MS.gene41840:CDS |
| TGGAAGGAAATGGGATGGCA+AGG | 0.585634 | 7.3:+21592237 | MS.gene41840:CDS |
| GGATGTCGATGGAAAACGGC+AGG | 0.585718 | 7.3:+21589479 | MS.gene41840:CDS |
| GTGGGATGATGAGAGAAAGA+AGG | 0.593292 | 7.3:+21589696 | MS.gene41840:CDS |
| TGATTATATTGAGAGTAAGA+AGG | 0.599715 | 7.3:+21589557 | MS.gene41840:CDS |
| ATTTAAGTGGAGGAAGCTCT+CGG | 0.606705 | 7.3:-21592206 | None:intergenic |
| ACTTAAATCAGATTGTTGGA+AGG | 0.607130 | 7.3:+21592221 | MS.gene41840:CDS |
| AGATGGAATCCGAGCAGAGT+GGG | 0.614159 | 7.3:+21592936 | MS.gene41840:CDS |
| TAATCATCACCTCCCAGCAA+CGG | 0.628970 | 7.3:-21589540 | None:intergenic |
| ACTGTGCCCATTGCGCAATG+AGG | 0.645478 | 7.3:-21589750 | None:intergenic |
| ATTGTTGGAAGGAAATGGGA+TGG | 0.650850 | 7.3:+21592232 | MS.gene41840:CDS |
| TTCAAATGATGGATGCTCAG+TGG | 0.654600 | 7.3:+21593652 | MS.gene41840:CDS |
| TTGAGGAGAAGACTCCATCA+CGG | 0.656992 | 7.3:+21589456 | MS.gene41840:CDS |
| TCTCTATACATACCTGCACA+GGG | 0.703300 | 7.3:-21590903 | None:intergenic |
| GAGGAGAAGACTCCATCACG+GGG | 0.729277 | 7.3:+21589458 | MS.gene41840:CDS |
| AAGATGGAATCCGAGCAGAG+TGG | 0.735731 | 7.3:+21592935 | MS.gene41840:CDS |
| TCATTGCGCAATGGGCACAG+TGG | 0.737416 | 7.3:+21589752 | MS.gene41840:CDS |
| TTGAATGAACCGTTGCTGGG+AGG | 0.740209 | 7.3:+21589531 | MS.gene41840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATATTAAATGTATCTT+AGG | - | chr7.3:21593446-21593465 | None:intergenic | 15.0% |
| !! | TAAGAATTGAATAAAAATCA+TGG | - | chr7.3:21590557-21590576 | None:intergenic | 15.0% |
| !! | TATATATATAAGACAAATGT+CGG | - | chr7.3:21591736-21591755 | None:intergenic | 15.0% |
| !!! | AAAATTTTGCTATTTTCTTT+AGG | + | chr7.3:21593787-21593806 | MS.gene41840:intron | 15.0% |
| !!! | ATTTTTAATATCTGAATTGT+GGG | + | chr7.3:21591920-21591939 | MS.gene41840:intron | 15.0% |
| !!! | TATTTTTAATATCTGAATTG+TGG | + | chr7.3:21591919-21591938 | MS.gene41840:intron | 15.0% |
| !!! | TGTTTAATTGTTTTACTTTA+AGG | + | chr7.3:21592287-21592306 | MS.gene41840:intron | 15.0% |
| !! | AAATAAGAAGAAAATGCAAA+TGG | + | chr7.3:21590655-21590674 | MS.gene41840:intron | 20.0% |
| !! | AAATGCATTAAATACATACT+TGG | - | chr7.3:21591697-21591716 | None:intergenic | 20.0% |
| !! | AATCAATATCTCATTTATGT+TGG | + | chr7.3:21592981-21593000 | MS.gene41840:CDS | 20.0% |
| !! | GTTAAACTTAAAGTTGAAAT+TGG | - | chr7.3:21590977-21590996 | None:intergenic | 20.0% |
| !! | TAATTTCAAAAAAACAGAGT+TGG | - | chr7.3:21592679-21592698 | None:intergenic | 20.0% |
| !! | TATACATACAAATGCAAATA+CGG | - | chr7.3:21592806-21592825 | None:intergenic | 20.0% |
| !! | TATTAGTGTACTACATATTA+GGG | + | chr7.3:21590203-21590222 | MS.gene41840:intron | 20.0% |
| !! | TATTTCTTTCTTTCTTTCTT+AGG | + | chr7.3:21591607-21591626 | MS.gene41840:intron | 20.0% |
| !! | TCAAAATGACAAAAAAATTG+TGG | - | chr7.3:21590444-21590463 | None:intergenic | 20.0% |
| !!! | AAGTATTCTTTAGAAATACT+TGG | + | chr7.3:21592555-21592574 | MS.gene41840:intron | 20.0% |
| !!! | AATTGTCGTTATTTTGTATT+TGG | + | chr7.3:21589585-21589604 | MS.gene41840:intron | 20.0% |
| !!! | ACTCTGTTTTTTTGAAATTA+TGG | + | chr7.3:21592679-21592698 | MS.gene41840:intron | 20.0% |
| !!! | ATAAGGTTTTATTCAGTTAT+AGG | + | chr7.3:21592334-21592353 | MS.gene41840:intron | 20.0% |
| !!! | ATATCATTTTCAAAAGACAA+AGG | - | chr7.3:21591097-21591116 | None:intergenic | 20.0% |
| !!! | ATCAATTGTATTTTCAGATA+GGG | - | chr7.3:21590999-21591018 | None:intergenic | 20.0% |
| !!! | CTTTTGATTATAAATATCAC+AGG | - | chr7.3:21591372-21591391 | None:intergenic | 20.0% |
| !!! | GAACAATCAATTTTAAATTG+TGG | + | chr7.3:21591401-21591420 | MS.gene41840:intron | 20.0% |
| !!! | TACATTTAATATTTCTGTAG+CGG | + | chr7.3:21593450-21593469 | MS.gene41840:intron | 20.0% |
| !!! | TTTATTTATTTCTTTGTTGC+AGG | + | chr7.3:21592146-21592165 | MS.gene41840:intron | 20.0% |
| ! | AAAAGATTCATTCTTAGGAT+TGG | + | chr7.3:21590062-21590081 | MS.gene41840:intron | 25.0% |
| ! | AATAATGGTTGAAATCAAGT+TGG | + | chr7.3:21593208-21593227 | MS.gene41840:intron | 25.0% |
| ! | ATAAAACCTTATCCATATTC+AGG | - | chr7.3:21592326-21592345 | None:intergenic | 25.0% |
| ! | ATTAAACTGTGTTTGTTCAT+TGG | + | chr7.3:21593718-21593737 | MS.gene41840:intron | 25.0% |
| ! | CCAAACATAATAAATGAATG+TGG | - | chr7.3:21593284-21593303 | None:intergenic | 25.0% |
| ! | CCACATTCATTTATTATGTT+TGG | + | chr7.3:21593281-21593300 | MS.gene41840:intron | 25.0% |
| ! | CTAAAAGTTTCATCAAACTT+CGG | + | chr7.3:21592639-21592658 | MS.gene41840:intron | 25.0% |
| ! | CTTAATTACTAAGCACATTA+TGG | - | chr7.3:21592838-21592857 | None:intergenic | 25.0% |
| ! | GAATACTTGTGACATATATA+AGG | - | chr7.3:21592543-21592562 | None:intergenic | 25.0% |
| ! | GTATTAGTGTACTACATATT+AGG | + | chr7.3:21590202-21590221 | MS.gene41840:intron | 25.0% |
| ! | TAATGATAGGATATTATCAC+TGG | + | chr7.3:21591163-21591182 | MS.gene41840:intron | 25.0% |
| ! | TAATGTGCTTAGTAATTAAG+TGG | + | chr7.3:21592838-21592857 | MS.gene41840:intron | 25.0% |
| ! | TAGTGAAAAACAATGTTAGA+TGG | + | chr7.3:21589868-21589887 | MS.gene41840:intron | 25.0% |
| ! | TATAACAAAATGGTATCAAG+AGG | - | chr7.3:21591847-21591866 | None:intergenic | 25.0% |
| ! | TGATTATATTGAGAGTAAGA+AGG | + | chr7.3:21589557-21589576 | MS.gene41840:CDS | 25.0% |
| ! | TTATTAGCATTATTCTGTGA+TGG | + | chr7.3:21593750-21593769 | MS.gene41840:intron | 25.0% |
| ! | TTGTAAGAAGAAAATGCAAA+TGG | + | chr7.3:21590719-21590738 | MS.gene41840:intron | 25.0% |
| !! | GAAAACAACGAGTAATTTTA+TGG | - | chr7.3:21591310-21591329 | None:intergenic | 25.0% |
| !! | GACATGTATAGCAATTTTAT+TGG | - | chr7.3:21592002-21592021 | None:intergenic | 25.0% |
| !! | GATCAATTGTATTTTCAGAT+AGG | - | chr7.3:21591000-21591019 | None:intergenic | 25.0% |
| !! | GATTTTACATGAAAAATGAG+AGG | - | chr7.3:21593519-21593538 | None:intergenic | 25.0% |
| !! | GGAGTTTGATGATATATATT+TGG | + | chr7.3:21591268-21591287 | MS.gene41840:intron | 25.0% |
| !! | GTTTTTACTTGCAAAACAAT+AGG | + | chr7.3:21590860-21590879 | MS.gene41840:CDS | 25.0% |
| !! | TGAAATTGGTTACTTGATTT+TGG | - | chr7.3:21590963-21590982 | None:intergenic | 25.0% |
| !! | TTTCAACCATTATTTTCACT+CGG | - | chr7.3:21593202-21593221 | None:intergenic | 25.0% |
| !! | TTTTCCGTTAGTAATAGTTA+TGG | + | chr7.3:21589933-21589952 | MS.gene41840:intron | 25.0% |
| !!! | AACACTTACTTGATAATGAT+AGG | + | chr7.3:21591150-21591169 | MS.gene41840:intron | 25.0% |
| !!! | AGGATTCATTGACTTAATAA+TGG | + | chr7.3:21592389-21592408 | MS.gene41840:intron | 25.0% |
| !!! | ATTGTTTTACTTTAAGGAGA+TGG | + | chr7.3:21592293-21592312 | MS.gene41840:intron | 25.0% |
| !!! | ATTGTTTTGCAAGTAAAAAC+CGG | - | chr7.3:21590860-21590879 | None:intergenic | 25.0% |
| !!! | CTGTTTTTTTGAAATTATGG+AGG | + | chr7.3:21592682-21592701 | MS.gene41840:intron | 25.0% |
| !!! | GCGTTATTATGTTTTTAGAT+TGG | - | chr7.3:21593179-21593198 | None:intergenic | 25.0% |
| !!! | GGATTCATTGACTTAATAAT+GGG | + | chr7.3:21592390-21592409 | MS.gene41840:intron | 25.0% |
| !!! | TTGTTTTACTTTAAGGAGAT+GGG | + | chr7.3:21592294-21592313 | MS.gene41840:intron | 25.0% |
| AAATGTCGGTAATGTGATTA+GGG | - | chr7.3:21591722-21591741 | None:intergenic | 30.0% | |
| AATGACAAAAAAATTGTGGC+TGG | - | chr7.3:21590440-21590459 | None:intergenic | 30.0% | |
| AATTCTCTTGAGAAATTCAG+TGG | + | chr7.3:21593036-21593055 | MS.gene41840:intron | 30.0% | |
| ACATAAGACTTCAGATTCAT+AGG | - | chr7.3:21590028-21590047 | None:intergenic | 30.0% | |
| ACATACATCTACTTGTTTGA+TGG | + | chr7.3:21592448-21592467 | MS.gene41840:intron | 30.0% | |
| ACTTAAATCAGATTGTTGGA+AGG | + | chr7.3:21592221-21592240 | MS.gene41840:CDS | 30.0% | |
| AGATGTATGTCAAACCTATA+AGG | - | chr7.3:21592438-21592457 | None:intergenic | 30.0% | |
| ATCAACACTAGCTGAAAATA+AGG | - | chr7.3:21593482-21593501 | None:intergenic | 30.0% | |
| ATGTACACTTGAAGATTTGT+GGG | + | chr7.3:21589678-21589697 | MS.gene41840:CDS | 30.0% | |
| CACGTGATCTTTAGTTAAAA+AGG | - | chr7.3:21591335-21591354 | None:intergenic | 30.0% | |
| CATAAGACTTCAGATTCATA+GGG | - | chr7.3:21590027-21590046 | None:intergenic | 30.0% | |
| CGAATAAAATCCTATTCCAA+TGG | + | chr7.3:21589958-21589977 | MS.gene41840:intron | 30.0% | |
| CTCCAGTATAAAAGATATAC+CGG | + | chr7.3:21593865-21593884 | MS.gene41840:CDS | 30.0% | |
| GACATATATAAGGTACATGT+GGG | - | chr7.3:21592533-21592552 | None:intergenic | 30.0% | |
| GACTAAGAAACTTAAAGCAA+CGG | + | chr7.3:21591636-21591655 | MS.gene41840:CDS | 30.0% | |
| GATGTATGTCAAACCTATAA+GGG | - | chr7.3:21592437-21592456 | None:intergenic | 30.0% | |
| GTCAATGAATCCTTACTTAA+TGG | - | chr7.3:21592382-21592401 | None:intergenic | 30.0% | |
| TAATATCTGAATTGTGGGTA+CGG | + | chr7.3:21591925-21591944 | MS.gene41840:intron | 30.0% | |
| TACTGTAAGACCATTAAGTA+AGG | + | chr7.3:21592369-21592388 | MS.gene41840:intron | 30.0% | |
| TATGTACACTTGAAGATTTG+TGG | + | chr7.3:21589677-21589696 | MS.gene41840:CDS | 30.0% | |
| TGACATATATAAGGTACATG+TGG | - | chr7.3:21592534-21592553 | None:intergenic | 30.0% | |
| TTACTTGCAAAACAATAGGA+TGG | + | chr7.3:21590864-21590883 | MS.gene41840:CDS | 30.0% | |
| TTCCAACAATCTGATTTAAG+TGG | - | chr7.3:21592222-21592241 | None:intergenic | 30.0% | |
| TTTCACAAGCTACATAAATG+AGG | - | chr7.3:21590583-21590602 | None:intergenic | 30.0% | |
| ! | AATTGGCACTGAATTTAATG+AGG | + | chr7.3:21590154-21590173 | MS.gene41840:intron | 30.0% |
| ! | AGAGCATCACTATAACAAAA+TGG | - | chr7.3:21591857-21591876 | None:intergenic | 30.0% |
| ! | AGTCTTTATAAAGAGTATGC+AGG | - | chr7.3:21592617-21592636 | None:intergenic | 30.0% |
| ! | CATTTTCAAAAGACAAAGGA+TGG | - | chr7.3:21591093-21591112 | None:intergenic | 30.0% |
| ! | CTATTTTCTTCATTGTTGAC+TGG | + | chr7.3:21590627-21590646 | MS.gene41840:intron | 30.0% |
| ! | TATGTAGCTTGTGAAAAATC+CGG | + | chr7.3:21590587-21590606 | MS.gene41840:intron | 30.0% |
| ! | TCTTTTACAACTGTGGAAAT+TGG | + | chr7.3:21592173-21592192 | MS.gene41840:CDS | 30.0% |
| ! | TTCAACCATTATTTTCACTC+GGG | - | chr7.3:21593201-21593220 | None:intergenic | 30.0% |
| !! | CTTGTTTGATGGTTTGATTT+TGG | + | chr7.3:21592459-21592478 | MS.gene41840:intron | 30.0% |
| !! | GTCGTTATTTTGTATTTGGA+GGG | + | chr7.3:21589589-21589608 | MS.gene41840:intron | 30.0% |
| !! | TGTCGTTATTTTGTATTTGG+AGG | + | chr7.3:21589588-21589607 | MS.gene41840:intron | 30.0% |
| !! | TGTTTTACTTTAAGGAGATG+GGG | + | chr7.3:21592295-21592314 | MS.gene41840:intron | 30.0% |
| !! | TTCATTGACTTAATAATGGG+AGG | + | chr7.3:21592393-21592412 | MS.gene41840:intron | 30.0% |
| !! | TTGCATTGCTTTTCAAATGA+TGG | + | chr7.3:21593641-21593660 | MS.gene41840:CDS | 30.0% |
| !!! | GGTTTGATTTTGGTTCTTTA+GGG | + | chr7.3:21592469-21592488 | MS.gene41840:intron | 30.0% |
| !!! | GTTTGATTTTGGTTCTTTAG+GGG | + | chr7.3:21592470-21592489 | MS.gene41840:intron | 30.0% |
| !!! | TGGTTTGATTTTGGTTCTTT+AGG | + | chr7.3:21592468-21592487 | MS.gene41840:intron | 30.0% |
| AATATCTGAATTGTGGGTAC+GGG | + | chr7.3:21591926-21591945 | MS.gene41840:intron | 35.0% | |
| ACACACCTAAAATCTGTTGA+TGG | - | chr7.3:21592270-21592289 | None:intergenic | 35.0% | |
| AGAGATATATACGTAAGACC+CGG | - | chr7.3:21590609-21590628 | None:intergenic | 35.0% | |
| AGATGCTCAAAAGCAAGATA+TGG | - | chr7.3:21592051-21592070 | None:intergenic | 35.0% | |
| AGGGAACTGTATAGATAGTT+TGG | + | chr7.3:21593350-21593369 | MS.gene41840:intron | 35.0% | |
| AGGTATGTTTACGATTGAGT+TGG | + | chr7.3:21589777-21589796 | MS.gene41840:intron | 35.0% | |
| ATAAATGGAATGTCCTTCCA+TGG | + | chr7.3:21591960-21591979 | MS.gene41840:intron | 35.0% | |
| ATACGGTAGAAGAAACTTAC+TGG | - | chr7.3:21592789-21592808 | None:intergenic | 35.0% | |
| ATCACAAATCAGAATATCCC+TGG | - | chr7.3:21591124-21591143 | None:intergenic | 35.0% | |
| ATCAGATTGTTGGAAGGAAA+TGG | + | chr7.3:21592227-21592246 | MS.gene41840:CDS | 35.0% | |
| ATTAGGGTTGAATCTCACTA+AGG | + | chr7.3:21590219-21590238 | MS.gene41840:intron | 35.0% | |
| CAAAATAGTCTGACCCTTAT+AGG | + | chr7.3:21592421-21592440 | MS.gene41840:intron | 35.0% | |
| CAAATGTCGGTAATGTGATT+AGG | - | chr7.3:21591723-21591742 | None:intergenic | 35.0% | |
| CAACAATCTGATTTAAGTGG+AGG | - | chr7.3:21592219-21592238 | None:intergenic | 35.0% | |
| CAACCAAACCTTATCTAACT+AGG | + | chr7.3:21593407-21593426 | MS.gene41840:intron | 35.0% | |
| CACACCTAAAATCTGTTGAT+GGG | - | chr7.3:21592269-21592288 | None:intergenic | 35.0% | |
| CCTTCCATGGATGAATTTAA+AGG | + | chr7.3:21591973-21591992 | MS.gene41840:intron | 35.0% | |
| CCTTTAAATTCATCCATGGA+AGG | - | chr7.3:21591976-21591995 | None:intergenic | 35.0% | |
| CGATTATTGCACAAACAAGA+TGG | + | chr7.3:21592919-21592938 | MS.gene41840:CDS | 35.0% | |
| CGCTCCATAACTATTACTAA+CGG | - | chr7.3:21589940-21589959 | None:intergenic | 35.0% | |
| CGGCTAAAAGATTCATTCTT+AGG | + | chr7.3:21590057-21590076 | MS.gene41840:intron | 35.0% | |
| CGGGGTTGTCAATTTATAAA+TGG | + | chr7.3:21591945-21591964 | MS.gene41840:intron | 35.0% | |
| CTCCACTTAAATCAGATTGT+TGG | + | chr7.3:21592217-21592236 | MS.gene41840:CDS | 35.0% | |
| GGGAACTGTATAGATAGTTT+GGG | + | chr7.3:21593351-21593370 | MS.gene41840:intron | 35.0% | |
| GTATTAGTGGAGTGAATTGA+TGG | + | chr7.3:21590116-21590135 | MS.gene41840:intron | 35.0% | |
| GTCACCTTTAAATTCATCCA+TGG | - | chr7.3:21591980-21591999 | None:intergenic | 35.0% | |
| TAGTTCATACGTTCTATGCT+TGG | + | chr7.3:21589896-21589915 | MS.gene41840:intron | 35.0% | |
| TCAGATTGTTGGAAGGAAAT+GGG | + | chr7.3:21592228-21592247 | MS.gene41840:CDS | 35.0% | |
| TCTCAATAATCTGCTACATG+TGG | + | chr7.3:21591566-21591585 | MS.gene41840:intron | 35.0% | |
| TTAATGAGGTTGCAATCACA+AGG | + | chr7.3:21590168-21590187 | MS.gene41840:intron | 35.0% | |
| TTCCAAAACACAATACAGTG+AGG | - | chr7.3:21591220-21591239 | None:intergenic | 35.0% | |
| TTGAAAATGATATGCTGCCA+GGG | + | chr7.3:21591104-21591123 | MS.gene41840:intron | 35.0% | |
| TTGCAGCAAACATTGTTCTA+GGG | + | chr7.3:21590794-21590813 | MS.gene41840:intron | 35.0% | |
| TTTGAAAATGATATGCTGCC+AGG | + | chr7.3:21591103-21591122 | MS.gene41840:intron | 35.0% | |
| TTTGCAGCAAACATTGTTCT+AGG | + | chr7.3:21590793-21590812 | MS.gene41840:intron | 35.0% | |
| ! | AAGTCTTATGTTTAGAGTGG+CGG | + | chr7.3:21590037-21590056 | MS.gene41840:intron | 35.0% |
| ! | AGCCGGTATATCTTTTATAC+TGG | - | chr7.3:21593870-21593889 | None:intergenic | 35.0% |
| ! | ATGCAGCAATTCGTATTGAT+TGG | - | chr7.3:21590335-21590354 | None:intergenic | 35.0% |
| ! | ATGTAGCTTGTGAAAAATCC+GGG | + | chr7.3:21590588-21590607 | MS.gene41840:intron | 35.0% |
| ! | CGGTATATCTTTTATACTGG+AGG | - | chr7.3:21593867-21593886 | None:intergenic | 35.0% |
| ! | CTAGTTAGATAAGGTTTGGT+TGG | - | chr7.3:21593409-21593428 | None:intergenic | 35.0% |
| ! | CTGAAGTCTTATGTTTAGAG+TGG | + | chr7.3:21590034-21590053 | MS.gene41840:intron | 35.0% |
| ! | GAACTTCTGTAGTCTCTTTT+TGG | + | chr7.3:21591521-21591540 | MS.gene41840:intron | 35.0% |
| ! | GGCTGGCTATACAAAATTTA+GGG | - | chr7.3:21590423-21590442 | None:intergenic | 35.0% |
| ! | TACCTCACTGTATTGTGTTT+TGG | + | chr7.3:21591215-21591234 | MS.gene41840:intron | 35.0% |
| ! | TAGAACAATGTTTGCTGCAA+AGG | - | chr7.3:21590794-21590813 | None:intergenic | 35.0% |
| ! | TGGCTGGCTATACAAAATTT+AGG | - | chr7.3:21590424-21590443 | None:intergenic | 35.0% |
| ! | TGTGATGGAGTTCAATTCAA+AGG | - | chr7.3:21591057-21591076 | None:intergenic | 35.0% |
| !! | GTGGGTAATGGATATTTCTT+TGG | + | chr7.3:21591247-21591266 | MS.gene41840:intron | 35.0% |
| !! | TCACTGTATTGTGTTTTGGA+AGG | + | chr7.3:21591219-21591238 | MS.gene41840:intron | 35.0% |
| !! | TGCAGCAATTCGTATTGATT+GGG | - | chr7.3:21590334-21590353 | None:intergenic | 35.0% |
| !!! | ATCTGTTTTAGAACCGTCAA+AGG | - | chr7.3:21591672-21591691 | None:intergenic | 35.0% |
| !!! | TCTGTTTTAGAACCGTCAAA+GGG | - | chr7.3:21591671-21591690 | None:intergenic | 35.0% |
| AAAACAAGCGTACGAGATAG+AGG | - | chr7.3:21593139-21593158 | None:intergenic | 40.0% | |
| AAATGACAGCGAGATTGAAC+AGG | - | chr7.3:21591815-21591834 | None:intergenic | 40.0% | |
| ACAAAGGATGGTTGAGTTAC+GGG | - | chr7.3:21591081-21591100 | None:intergenic | 40.0% | |
| ACTTCTGCGCAAAAAAGATG+AGG | - | chr7.3:21592764-21592783 | None:intergenic | 40.0% | |
| AGAAGATGGAACAACTGCAA+CGG | - | chr7.3:21593559-21593578 | None:intergenic | 40.0% | |
| AGACCATATCTCATCCAATG+TGG | - | chr7.3:21593089-21593108 | None:intergenic | 40.0% | |
| AGACTACAGAAGTTCAGCAA+AGG | - | chr7.3:21591516-21591535 | None:intergenic | 40.0% | |
| AGATTGAACAGGCAGAATAC+AGG | - | chr7.3:21591804-21591823 | None:intergenic | 40.0% | |
| AGCAAAGCGTGCTACATATA+TGG | + | chr7.3:21593677-21593696 | MS.gene41840:CDS | 40.0% | |
| AGTGGCAAATCCATTGGAAT+AGG | - | chr7.3:21589971-21589990 | None:intergenic | 40.0% | |
| AGTTGTTCCATCTTCTTCGT+CGG | + | chr7.3:21593563-21593582 | MS.gene41840:intron | 40.0% | |
| ATATCTGAATTGTGGGTACG+GGG | + | chr7.3:21591927-21591946 | MS.gene41840:intron | 40.0% | |
| ATCTCTATACATACCTGCAC+AGG | - | chr7.3:21590907-21590926 | None:intergenic | 40.0% | |
| ATTGTTGGAAGGAAATGGGA+TGG | + | chr7.3:21592232-21592251 | MS.gene41840:CDS | 40.0% | |
| ATTTAAGTGGAGGAAGCTCT+CGG | - | chr7.3:21592209-21592228 | None:intergenic | 40.0% | |
| ATTTATGTTGGTGCAGATGC+TGG | + | chr7.3:21592993-21593012 | MS.gene41840:CDS | 40.0% | |
| ATTTGCCACTCTTGCAAACA+AGG | + | chr7.3:21589981-21590000 | MS.gene41840:intron | 40.0% | |
| CAGGAACATTTGGATACTTC+TGG | + | chr7.3:21589498-21589517 | MS.gene41840:CDS | 40.0% | |
| CCAAACCTTATCTAACTAGG+TGG | + | chr7.3:21593410-21593429 | MS.gene41840:intron | 40.0% | |
| CCACCTAGTTAGATAAGGTT+TGG | - | chr7.3:21593413-21593432 | None:intergenic | 40.0% | |
| CCCAAAAACTAGCTCAAGAA+GGG | - | chr7.3:21592591-21592610 | None:intergenic | 40.0% | |
| CTATCTATACAGTTCCCTTG+AGG | - | chr7.3:21593348-21593367 | None:intergenic | 40.0% | |
| CTTGTTTGTGCAATAATCGC+TGG | - | chr7.3:21592918-21592937 | None:intergenic | 40.0% | |
| GAATATCCATTTGCAGTAGC+TGG | + | chr7.3:21592958-21592977 | MS.gene41840:CDS | 40.0% | |
| GACAAAGGATGGTTGAGTTA+CGG | - | chr7.3:21591082-21591101 | None:intergenic | 40.0% | |
| GACCATATCTCATCCAATGT+GGG | - | chr7.3:21593088-21593107 | None:intergenic | 40.0% | |
| GACTCGATTGTACTTTGCAA+AGG | - | chr7.3:21593311-21593330 | None:intergenic | 40.0% | |
| GAGCTCATTAGATCTAACCA+TGG | + | chr7.3:21592704-21592723 | MS.gene41840:intron | 40.0% | |
| GTTCTCCACCTAGTTAGATA+AGG | - | chr7.3:21593418-21593437 | None:intergenic | 40.0% | |
| TAACGCCCGAGTGAAAATAA+TGG | + | chr7.3:21593193-21593212 | MS.gene41840:intron | 40.0% | |
| TAGCCTACCACATTTCTACT+TGG | + | chr7.3:21592873-21592892 | MS.gene41840:intron | 40.0% | |
| TCATTGAATGAACCGTTGCT+GGG | + | chr7.3:21589528-21589547 | MS.gene41840:CDS | 40.0% | |
| TCTCTATACATACCTGCACA+GGG | - | chr7.3:21590906-21590925 | None:intergenic | 40.0% | |
| TTAGTGGAGTGAATTGATGG+AGG | + | chr7.3:21590119-21590138 | MS.gene41840:intron | 40.0% | |
| TTCATTGAATGAACCGTTGC+TGG | + | chr7.3:21589527-21589546 | MS.gene41840:CDS | 40.0% | |
| TTGATTCCAGCTACTGCAAA+TGG | - | chr7.3:21592967-21592986 | None:intergenic | 40.0% | |
| TTGCCAAGTAGAAATGTGGT+AGG | - | chr7.3:21592879-21592898 | None:intergenic | 40.0% | |
| TTTCTACTTGGCAATGCCAT+AGG | + | chr7.3:21592885-21592904 | MS.gene41840:intron | 40.0% | |
| ! | ACTTTCCTTGTTTGCAAGAG+TGG | - | chr7.3:21589989-21590008 | None:intergenic | 40.0% |
| ! | AGATCTAACCATGGTTTGCA+GGG | + | chr7.3:21592713-21592732 | MS.gene41840:intron | 40.0% |
| ! | CAGACCCATCAACAGATTTT+AGG | + | chr7.3:21592262-21592281 | MS.gene41840:CDS | 40.0% |
| ! | CGTCGGGAATATGTTTTCTA+CGG | + | chr7.3:21593580-21593599 | MS.gene41840:CDS | 40.0% |
| ! | CTTTTATCGCATTCTACTGC+CGG | + | chr7.3:21590838-21590857 | MS.gene41840:CDS | 40.0% |
| ! | GAAAGAAGGCGCAAATTCAT+TGG | + | chr7.3:21589710-21589729 | MS.gene41840:CDS | 40.0% |
| ! | GTATGATCAAGCACGTCTTT+TGG | + | chr7.3:21590084-21590103 | MS.gene41840:intron | 40.0% |
| ! | TAGATCTAACCATGGTTTGC+AGG | + | chr7.3:21592712-21592731 | MS.gene41840:intron | 40.0% |
| ! | TGCAAATGGCATGCTTTTAG+TGG | + | chr7.3:21590669-21590688 | MS.gene41840:intron | 40.0% |
| ! | TTACTTTAAGGAGATGGGGA+GGG | + | chr7.3:21592299-21592318 | MS.gene41840:intron | 40.0% |
| ! | TTTACTTTAAGGAGATGGGG+AGG | + | chr7.3:21592298-21592317 | MS.gene41840:intron | 40.0% |
| !! | CGTTCTATGCTTGGTTTTTG+TGG | + | chr7.3:21589905-21589924 | MS.gene41840:intron | 40.0% |
| !! | TTCAAATGATGGATGCTCAG+TGG | + | chr7.3:21593652-21593671 | MS.gene41840:CDS | 40.0% |
| !!! | CCCTTCTTGAGCTAGTTTTT+GGG | + | chr7.3:21592588-21592607 | MS.gene41840:intron | 40.0% |
| !!! | CTGTAGTCTCTTTTTGGAGT+TGG | + | chr7.3:21591527-21591546 | MS.gene41840:intron | 40.0% |
| !!! | CTTGTTTTGTTACGATGAGC+TGG | + | chr7.3:21593151-21593170 | MS.gene41840:intron | 40.0% |
| AAGATGGAACAACTGCAACG+GGG | - | chr7.3:21593557-21593576 | None:intergenic | 45.0% | |
| AATCGCTGGAATGAGACCTA+TGG | - | chr7.3:21592904-21592923 | None:intergenic | 45.0% | |
| ACATGTTGAGAGTCCCACAT+TGG | + | chr7.3:21593072-21593091 | MS.gene41840:intron | 45.0% | |
| AGCTCAAGAAGGGCAATGAT+TGG | - | chr7.3:21592581-21592600 | None:intergenic | 45.0% | |
| ATGAGGTTGCAATCACAAGG+TGG | + | chr7.3:21590171-21590190 | MS.gene41840:intron | 45.0% | |
| ATGGATATTCCCACTCTGCT+CGG | - | chr7.3:21592948-21592967 | None:intergenic | 45.0% | |
| CAAAGGATGGTTGAGTTACG+GGG | - | chr7.3:21591080-21591099 | None:intergenic | 45.0% | |
| CAGATGCTGGATCTTCAATC+AGG | + | chr7.3:21593006-21593025 | MS.gene41840:CDS | 45.0% | |
| CAGTGAGGTATACGAGAAAC+TGG | - | chr7.3:21591205-21591224 | None:intergenic | 45.0% | |
| CATATTCCCGACGAAGAAGA+TGG | - | chr7.3:21593573-21593592 | None:intergenic | 45.0% | |
| CATCTCAACATGTTGTGAGC+CGG | - | chr7.3:21593887-21593906 | None:intergenic | 45.0% | |
| GAAGATGGAACAACTGCAAC+GGG | - | chr7.3:21593558-21593577 | None:intergenic | 45.0% | |
| GCCCAAAAACTAGCTCAAGA+AGG | - | chr7.3:21592592-21592611 | None:intergenic | 45.0% | |
| GGAGGAGGGTGATTGAAAAT+TGG | + | chr7.3:21590137-21590156 | MS.gene41840:intron | 45.0% | |
| GGCATTGCCAAGTAGAAATG+TGG | - | chr7.3:21592883-21592902 | None:intergenic | 45.0% | |
| GTCCCACATTGGATGAGATA+TGG | + | chr7.3:21593083-21593102 | MS.gene41840:intron | 45.0% | |
| GTGGGATGATGAGAGAAAGA+AGG | + | chr7.3:21589696-21589715 | MS.gene41840:CDS | 45.0% | |
| GTTGTTCCATCTTCTTCGTC+GGG | + | chr7.3:21593564-21593583 | MS.gene41840:intron | 45.0% | |
| TAATCATCACCTCCCAGCAA+CGG | - | chr7.3:21589543-21589562 | None:intergenic | 45.0% | |
| TGAAAGCCTGTTTGCCTCAA+GGG | + | chr7.3:21593331-21593350 | MS.gene41840:intron | 45.0% | |
| TGCAAGAGTGGCAAATCCAT+TGG | - | chr7.3:21589977-21589996 | None:intergenic | 45.0% | |
| TGGAAAACGGCAGGAACATT+TGG | + | chr7.3:21589488-21589507 | MS.gene41840:CDS | 45.0% | |
| TGGAGTGAATTGATGGAGGA+GGG | + | chr7.3:21590123-21590142 | MS.gene41840:intron | 45.0% | |
| TTCGAACCTCATTGCGCAAT+GGG | + | chr7.3:21589744-21589763 | MS.gene41840:CDS | 45.0% | |
| TTGAGGAGAAGACTCCATCA+CGG | + | chr7.3:21589456-21589475 | MS.gene41840:CDS | 45.0% | |
| TTTCGAACCTCATTGCGCAA+TGG | + | chr7.3:21589743-21589762 | MS.gene41840:CDS | 45.0% | |
| ! | AGGACGCTCTTTTACAACTG+TGG | + | chr7.3:21592166-21592185 | MS.gene41840:intron | 45.0% |
| ! | ATGTTTTCTACGGCTGCTTG+AGG | + | chr7.3:21593590-21593609 | MS.gene41840:CDS | 45.0% |
| ! | GATCTAACCATGGTTTGCAG+GGG | + | chr7.3:21592714-21592733 | MS.gene41840:intron | 45.0% |
| ! | TACTTTAAGGAGATGGGGAG+GGG | + | chr7.3:21592300-21592319 | MS.gene41840:intron | 45.0% |
| !! | GCAAACATTGTTCTAGGGTC+TGG | + | chr7.3:21590799-21590818 | MS.gene41840:intron | 45.0% |
| !! | TTGGAGCTTGGGAGTATTAG+TGG | + | chr7.3:21590103-21590122 | MS.gene41840:intron | 45.0% |
| !!! | AAGCACGTCTTTTGGAGCTT+GGG | + | chr7.3:21590092-21590111 | MS.gene41840:intron | 45.0% |
| !!! | GCCCTTCTTGAGCTAGTTTT+TGG | + | chr7.3:21592587-21592606 | MS.gene41840:intron | 45.0% |
| !!! | GTGTTTTGGAAGGCATCAGT+GGG | + | chr7.3:21591229-21591248 | MS.gene41840:intron | 45.0% |
| !!! | TGTGTTTTGGAAGGCATCAG+TGG | + | chr7.3:21591228-21591247 | MS.gene41840:intron | 45.0% |
| AAGATGGAATCCGAGCAGAG+TGG | + | chr7.3:21592935-21592954 | MS.gene41840:CDS | 50.0% | |
| ACAGTTCCCTTGAGGCAAAC+AGG | - | chr7.3:21593340-21593359 | None:intergenic | 50.0% | |
| ACGGGGATGTCGATGGAAAA+CGG | + | chr7.3:21589475-21589494 | MS.gene41840:CDS | 50.0% | |
| AGATGGAATCCGAGCAGAGT+GGG | + | chr7.3:21592936-21592955 | MS.gene41840:CDS | 50.0% | |
| CGGCTTGAAGTTCCCTTTGA+CGG | + | chr7.3:21591656-21591675 | MS.gene41840:CDS | 50.0% | |
| CTGAAAGCCTGTTTGCCTCA+AGG | + | chr7.3:21593330-21593349 | MS.gene41840:intron | 50.0% | |
| GAGGGGCCTGAATATGGATA+AGG | + | chr7.3:21592317-21592336 | MS.gene41840:intron | 50.0% | |
| GCTGCTTGAGGAGGATGAAA+TGG | + | chr7.3:21593602-21593621 | MS.gene41840:CDS | 50.0% | |
| GGTTGCAATCACAAGGTGGT+TGG | + | chr7.3:21590175-21590194 | MS.gene41840:intron | 50.0% | |
| GTGGAGTGAATTGATGGAGG+AGG | + | chr7.3:21590122-21590141 | MS.gene41840:intron | 50.0% | |
| TGAGGAGAAGACTCCATCAC+GGG | + | chr7.3:21589457-21589476 | MS.gene41840:CDS | 50.0% | |
| TGGAAGGAAATGGGATGGCA+AGG | + | chr7.3:21592237-21592256 | MS.gene41840:CDS | 50.0% | |
| TTGAATGAACCGTTGCTGGG+AGG | + | chr7.3:21589531-21589550 | MS.gene41840:CDS | 50.0% | |
| ! | TTTTCTACGGCTGCTTGAGG+AGG | + | chr7.3:21593593-21593612 | MS.gene41840:CDS | 50.0% |
| !! | TGGAAGGCATCAGTGGGTAA+TGG | + | chr7.3:21591235-21591254 | MS.gene41840:intron | 50.0% |
| !!! | CAAGCACGTCTTTTGGAGCT+TGG | + | chr7.3:21590091-21590110 | MS.gene41840:intron | 50.0% |
| ACCTGCACAGGGCTAAGTGT+TGG | - | chr7.3:21590895-21590914 | None:intergenic | 55.0% | |
| ACTGTGCCCATTGCGCAATG+AGG | - | chr7.3:21589753-21589772 | None:intergenic | 55.0% | |
| GAGGAGAAGACTCCATCACG+GGG | + | chr7.3:21589458-21589477 | MS.gene41840:CDS | 55.0% | |
| GGATGTCGATGGAAAACGGC+AGG | + | chr7.3:21589479-21589498 | MS.gene41840:CDS | 55.0% | |
| GGTTGAGTTACGGGGTGTGA+TGG | - | chr7.3:21591072-21591091 | None:intergenic | 55.0% | |
| TCATTGCGCAATGGGCACAG+TGG | + | chr7.3:21589752-21589771 | MS.gene41840:CDS | 55.0% | |
| TCCAACACTTAGCCCTGTGC+AGG | + | chr7.3:21590891-21590910 | MS.gene41840:CDS | 55.0% | |
| TTCCATCGACATCCCCGTGA+TGG | - | chr7.3:21589473-21589492 | None:intergenic | 55.0% | |
| ! | CTAACCATGGTTTGCAGGGG+TGG | + | chr7.3:21592717-21592736 | MS.gene41840:intron | 55.0% |
| !! | TGCACAGGGCTAAGTGTTGG+AGG | - | chr7.3:21590892-21590911 | None:intergenic | 55.0% |
| AGTGGAGGAAGCTCTCGGTC+AGG | - | chr7.3:21592204-21592223 | None:intergenic | 60.0% | |
| CTCCATCACGGGGATGTCGA+TGG | + | chr7.3:21589468-21589487 | MS.gene41840:CDS | 60.0% | |
| GATGGGGAGGGGCCTGAATA+TGG | + | chr7.3:21592311-21592330 | MS.gene41840:intron | 60.0% | |
| GCGCAATGGGCACAGTGGTT+AGG | + | chr7.3:21589757-21589776 | MS.gene41840:CDS | 60.0% | |
| ! | ACCATGGTTTGCAGGGGTGG+AGG | + | chr7.3:21592720-21592739 | MS.gene41840:intron | 60.0% |
| ! | CCATGGTTTGCAGGGGTGGA+GGG | + | chr7.3:21592721-21592740 | MS.gene41840:intron | 60.0% |
| CCCTCCACCCCTGCAAACCA+TGG | - | chr7.3:21592724-21592743 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 21589441 | 21593907 | 21589441 | ID=MS.gene41840 |
| chr7.3 | mRNA | 21589441 | 21593907 | 21589441 | ID=MS.gene41840.t1;Parent=MS.gene41840 |
| chr7.3 | exon | 21589441 | 21589578 | 21589441 | ID=MS.gene41840.t1.exon1;Parent=MS.gene41840.t1 |
| chr7.3 | CDS | 21589441 | 21589578 | 21589441 | ID=cds.MS.gene41840.t1;Parent=MS.gene41840.t1 |
| chr7.3 | exon | 21589676 | 21589778 | 21589676 | ID=MS.gene41840.t1.exon2;Parent=MS.gene41840.t1 |
| chr7.3 | CDS | 21589676 | 21589778 | 21589676 | ID=cds.MS.gene41840.t1;Parent=MS.gene41840.t1 |
| chr7.3 | exon | 21590800 | 21590912 | 21590800 | ID=MS.gene41840.t1.exon3;Parent=MS.gene41840.t1 |
| chr7.3 | CDS | 21590800 | 21590912 | 21590800 | ID=cds.MS.gene41840.t1;Parent=MS.gene41840.t1 |
| chr7.3 | exon | 21591629 | 21591697 | 21591629 | ID=MS.gene41840.t1.exon4;Parent=MS.gene41840.t1 |
| chr7.3 | CDS | 21591629 | 21591697 | 21591629 | ID=cds.MS.gene41840.t1;Parent=MS.gene41840.t1 |
| chr7.3 | exon | 21592168 | 21592283 | 21592168 | ID=MS.gene41840.t1.exon5;Parent=MS.gene41840.t1 |
| chr7.3 | CDS | 21592168 | 21592283 | 21592168 | ID=cds.MS.gene41840.t1;Parent=MS.gene41840.t1 |
| chr7.3 | exon | 21592734 | 21592788 | 21592734 | ID=MS.gene41840.t1.exon6;Parent=MS.gene41840.t1 |
| chr7.3 | CDS | 21592734 | 21592788 | 21592734 | ID=cds.MS.gene41840.t1;Parent=MS.gene41840.t1 |
| chr7.3 | exon | 21592907 | 21593027 | 21592907 | ID=MS.gene41840.t1.exon7;Parent=MS.gene41840.t1 |
| chr7.3 | CDS | 21592907 | 21593027 | 21592907 | ID=cds.MS.gene41840.t1;Parent=MS.gene41840.t1 |
| chr7.3 | exon | 21593565 | 21593707 | 21593565 | ID=MS.gene41840.t1.exon8;Parent=MS.gene41840.t1 |
| chr7.3 | CDS | 21593565 | 21593707 | 21593565 | ID=cds.MS.gene41840.t1;Parent=MS.gene41840.t1 |
| chr7.3 | exon | 21593809 | 21593907 | 21593809 | ID=MS.gene41840.t1.exon9;Parent=MS.gene41840.t1 |
| chr7.3 | CDS | 21593809 | 21593907 | 21593809 | ID=cds.MS.gene41840.t1;Parent=MS.gene41840.t1 |
| Gene Sequence |
| Protein sequence |
