AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene52365

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52365.t1 MTR_3g074410 65.217 506 109 5 5 443 4 509 0.0 646
MS.gene52365.t1 MTR_3g074390 76.884 398 92 0 1 398 5 402 0.0 635
MS.gene52365.t1 MTR_3g074380 78.237 363 76 2 5 364 4 366 0.0 583
MS.gene52365.t1 MTR_3g074270 61.345 476 138 5 5 435 4 478 0.0 582
MS.gene52365.t1 MTR_3g074340 66.563 323 43 4 186 443 18 340 1.11e-140 406
MS.gene52365.t1 MTR_3g074370 66.873 323 42 4 186 443 18 340 1.51e-140 406
MS.gene52365.t1 MTR_3g074320 66.254 323 44 4 186 443 18 340 7.51e-140 404
MS.gene52365.t1 MTR_3g008160 52.273 396 179 7 9 398 6 397 3.30e-139 409
MS.gene52365.t1 MTR_3g074400 59.207 353 110 5 51 402 1 320 7.01e-133 389
MS.gene52365.t1 MTR_5g082540 48.980 392 194 4 11 398 8 397 1.08e-129 384
MS.gene52365.t1 MTR_3g008170 51.005 398 187 6 6 398 4 398 3.30e-129 383
MS.gene52365.t1 MTR_1g038630 47.475 396 204 3 5 398 4 397 9.64e-129 382
MS.gene52365.t1 MTR_5g041550 48.120 399 200 5 5 398 4 400 3.02e-127 378
MS.gene52365.t1 MTR_5g006070 49.485 388 187 6 16 398 14 397 6.73e-127 377
MS.gene52365.t1 MTR_4g091370 52.196 387 179 5 16 398 15 399 1.06e-124 372
MS.gene52365.t1 MTR_3g093010 49.118 397 195 5 5 396 3 397 1.95e-124 371
MS.gene52365.t1 MTR_0009s0370 47.595 395 199 6 9 398 7 398 4.33e-122 365
MS.gene52365.t1 MTR_4g090600 50.248 404 195 5 2 401 1 402 9.72e-122 364
MS.gene52365.t1 MTR_0204s0020 46.494 385 201 4 13 396 10 390 4.41e-120 359
MS.gene52365.t1 MTR_3g008160 51.136 352 164 6 51 398 1 348 1.87e-119 356
MS.gene52365.t1 MTR_1g104780 46.617 399 203 7 5 398 4 397 7.40e-118 354
MS.gene52365.t1 MTR_3g023480 45.361 388 205 5 16 398 13 398 4.20e-116 350
MS.gene52365.t1 MTR_0204s0020 45.714 385 201 5 13 396 10 387 8.23e-116 348
MS.gene52365.t1 MTR_7g091690 47.297 370 190 4 16 384 19 384 2.89e-115 347
MS.gene52365.t1 MTR_5g094760 47.297 370 190 4 16 384 19 384 1.63e-114 345
MS.gene52365.t1 MTR_1g038600 44.416 394 201 4 5 398 4 379 2.66e-114 344
MS.gene52365.t1 MTR_0204s0040 42.929 396 220 5 3 396 7 398 2.70e-113 342
MS.gene52365.t1 MTR_1g104770 43.970 398 216 5 5 398 4 398 3.25e-113 342
MS.gene52365.t1 MTR_1g104750 44.975 398 211 6 5 398 4 397 9.61e-113 340
MS.gene52365.t1 MTR_8g102860 47.545 387 195 8 16 398 18 400 7.38e-112 339
MS.gene52365.t1 MTR_6g087040 47.545 387 195 7 16 398 18 400 1.16e-111 338
MS.gene52365.t1 MTR_6g088375 47.545 387 195 7 16 398 18 400 1.16e-111 338
MS.gene52365.t1 MTR_4g116790 45.028 362 194 4 5 363 6 365 1.66e-111 333
MS.gene52365.t1 MTR_4g116770 42.929 396 220 5 3 396 203 594 3.39e-111 343
MS.gene52365.t1 MTR_3g093060 48.011 352 175 5 51 396 1 350 6.76e-111 335
MS.gene52365.t1 MTR_4g116790 43.979 382 207 5 5 383 6 383 1.19e-110 336
MS.gene52365.t1 MTR_5g006070 47.875 353 175 6 51 398 1 349 1.21e-108 329
MS.gene52365.t1 MTR_3g007910 45.823 395 179 7 5 396 3 365 4.70e-107 325
MS.gene52365.t1 MTR_8g102860 47.443 352 177 8 51 398 1 348 2.07e-98 303
MS.gene52365.t1 MTR_3g074330 90.968 155 7 1 5 152 4 158 1.40e-90 272
MS.gene52365.t1 MTR_3g074360 90.968 155 7 1 5 152 4 158 1.40e-90 272
MS.gene52365.t1 MTR_3g074310 90.323 155 8 1 5 152 4 158 8.58e-90 270
MS.gene52365.t1 MTR_5g096000 50.562 178 70 1 5 182 3 162 1.64e-47 166
MS.gene52365.t1 MTR_2g013310 30.141 355 220 6 25 370 53 388 4.19e-39 148
MS.gene52365.t1 MTR_4g072030 27.855 359 219 7 28 366 31 369 1.29e-38 146
MS.gene52365.t1 MTR_2g013310 32.069 290 189 3 89 370 26 315 1.48e-38 145
MS.gene52365.t1 MTR_6g088450 28.061 392 248 9 29 411 63 429 5.98e-38 144
MS.gene52365.t1 MTR_4g069500 28.889 360 215 7 28 366 34 373 9.15e-38 144
MS.gene52365.t1 MTR_8g103500 27.019 359 224 7 19 362 13 348 1.75e-37 143
MS.gene52365.t1 MTR_4g069500 31.525 295 180 5 93 366 30 323 2.02e-37 142
MS.gene52365.t1 MTR_3g116240 27.978 361 219 9 28 366 32 373 1.34e-36 140
MS.gene52365.t1 MTR_0064s0040 48.366 153 66 2 1 152 1 141 1.21e-35 129
MS.gene52365.t1 MTR_7g446340 28.056 360 231 7 21 371 51 391 2.05e-35 137
MS.gene52365.t1 MTR_6g007340 28.056 360 231 7 21 371 51 391 2.05e-35 137
MS.gene52365.t1 MTR_2g049020 31.672 341 205 8 35 365 37 359 3.49e-35 137
MS.gene52365.t1 MTR_2g048720 31.045 335 206 8 35 362 37 353 6.52e-35 137
MS.gene52365.t1 MTR_8g077890 25.519 482 255 13 29 426 24 485 1.12e-34 135
MS.gene52365.t1 MTR_7g082270 27.019 359 239 6 10 366 51 388 5.83e-33 130
MS.gene52365.t1 MTR_7g082270 27.019 359 239 6 10 366 51 388 9.53e-33 130
MS.gene52365.t1 MTR_6g018790 27.300 337 224 5 17 353 98 413 3.38e-32 129
MS.gene52365.t1 MTR_8g077310 29.225 284 194 2 83 366 87 363 6.65e-31 123
MS.gene52365.t1 MTR_2g026160 27.978 361 232 6 35 386 38 379 1.39e-30 124
MS.gene52365.t1 MTR_7g094450 27.431 401 222 9 80 419 77 469 1.63e-30 123
MS.gene52365.t1 MTR_8g077310 29.225 284 194 2 83 366 87 363 1.88e-30 123
MS.gene52365.t1 MTR_8g077300 27.243 301 212 2 83 383 79 372 2.17e-30 123
MS.gene52365.t1 MTR_5g075300 27.411 394 236 11 29 398 24 391 6.87e-30 121
MS.gene52365.t1 MTR_8g077310 28.938 273 187 2 94 366 1 266 1.12e-29 119
MS.gene52365.t1 MTR_3g080240 27.353 340 221 8 29 365 98 414 7.01e-29 119
MS.gene52365.t1 MTR_7g094110 28.042 378 223 8 83 419 82 451 1.80e-28 117
MS.gene52365.t1 MTR_7g113970 26.246 301 211 5 83 382 102 392 2.94e-28 116
MS.gene52365.t1 MTR_4g077740 25.291 344 233 7 23 354 44 375 4.69e-28 116
MS.gene52365.t1 MTR_7g113970 26.246 301 211 5 83 382 102 392 4.78e-28 116
MS.gene52365.t1 MTR_7g113960 27.037 270 189 3 83 352 67 328 1.07e-27 114
MS.gene52365.t1 MTR_5g077580 27.701 361 189 7 35 350 37 370 1.60e-27 115
MS.gene52365.t1 MTR_7g113960 27.037 270 189 3 83 352 67 328 2.04e-27 114
MS.gene52365.t1 MTR_3g084110 25.926 378 249 9 35 409 39 388 2.58e-27 114
MS.gene52365.t1 MTR_1g022315 26.761 284 201 2 83 366 89 365 4.54e-27 113
MS.gene52365.t1 MTR_2g020710 27.715 267 184 4 83 348 89 347 6.36e-27 111
MS.gene52365.t1 MTR_2g020710 27.715 267 184 4 83 348 89 347 6.83e-27 112
MS.gene52365.t1 MTR_2g020710 27.715 267 184 4 83 348 89 347 7.51e-27 112
MS.gene52365.t1 MTR_5g019870 26.733 303 200 6 76 357 49 350 8.33e-27 112
MS.gene52365.t1 MTR_2g020710 27.820 266 183 4 84 348 1 258 1.03e-26 111
MS.gene52365.t1 MTR_2g020710 27.715 267 184 4 83 348 89 347 1.78e-26 111
MS.gene52365.t1 MTR_1g022315 26.374 273 194 2 94 366 1 266 2.02e-26 110
MS.gene52365.t1 MTR_7g005910 27.059 340 228 6 30 366 39 361 2.97e-26 111
MS.gene52365.t1 MTR_7g094110 28.114 281 193 3 83 362 82 354 3.28e-26 110
MS.gene52365.t1 MTR_5g020270 27.113 284 200 2 83 366 90 366 4.04e-26 110
MS.gene52365.t1 MTR_1g038620 35.625 160 84 3 202 361 50 190 1.55e-25 103
MS.gene52365.t1 MTR_4g064820 26.667 360 237 7 23 367 95 442 1.70e-25 108
MS.gene52365.t1 MTR_5g020270 26.740 273 193 2 94 366 1 266 3.13e-25 107
MS.gene52365.t1 MTR_1g116660 25.130 386 252 9 30 409 41 395 8.52e-25 107
MS.gene52365.t1 MTR_4g118610 23.970 267 194 4 83 348 92 350 3.59e-24 104
MS.gene52365.t1 MTR_4g118610 23.970 267 194 4 83 348 92 350 6.34e-24 104
MS.gene52365.t1 MTR_2g026140 27.378 347 212 8 30 366 30 346 2.69e-23 102
MS.gene52365.t1 MTR_4g013205 23.853 327 221 5 29 352 41 342 1.18e-22 100
MS.gene52365.t1 MTR_6g087910 22.868 258 194 3 93 350 102 354 1.62e-22 100
MS.gene52365.t1 MTR_1g116650 26.012 346 220 7 26 366 78 392 1.92e-22 100
MS.gene52365.t1 MTR_5g020270 26.441 295 196 5 83 365 90 375 6.87e-22 98.2
MS.gene52365.t1 MTR_4g069500 29.891 184 107 5 203 366 3 184 3.11e-16 80.1
MS.gene52365.t1 MTR_3g116060 28.655 171 119 3 91 259 52 221 7.72e-16 80.5
MS.gene52365.t1 MTR_3g118530 28.655 171 119 3 91 259 54 223 4.74e-15 77.8
MS.gene52365.t1 MTR_3g118530 28.655 171 119 3 91 259 54 223 1.22e-14 76.6
MS.gene52365.t1 MTR_5g024740 25.847 236 153 7 22 254 2 218 2.28e-14 75.9
MS.gene52365.t1 MTR_5g044910 28.324 173 121 3 84 254 47 218 2.32e-14 75.9
MS.gene52365.t1 MTR_8g073100 27.374 179 127 3 78 254 41 218 2.74e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene52365.t1 AT1G34580 62.060 398 147 3 5 398 4 401 2.33e-169 485
MS.gene52365.t1 AT1G34580 60.969 351 134 2 51 398 1 351 3.46e-146 424
MS.gene52365.t1 AT1G11260 51.122 401 190 5 2 398 1 399 2.50e-138 407
MS.gene52365.t1 AT3G19930 51.637 397 187 4 5 398 3 397 1.09e-136 402
MS.gene52365.t1 AT3G19930 51.637 397 187 4 5 398 3 397 1.09e-136 402
MS.gene52365.t1 AT4G21480 51.378 399 190 4 2 398 1 397 3.95e-135 398
MS.gene52365.t1 AT5G23270 50.374 401 189 6 5 398 3 400 6.35e-130 385
MS.gene52365.t1 AT3G19940 51.175 383 179 5 20 398 21 399 2.87e-127 378
MS.gene52365.t1 AT1G50310 50.262 382 185 5 20 398 21 400 1.81e-125 374
MS.gene52365.t1 AT5G26340 47.739 398 201 5 5 398 4 398 1.46e-122 367
MS.gene52365.t1 AT4G02050 46.597 382 199 4 16 396 19 396 1.18e-117 353
MS.gene52365.t1 AT4G02050 46.597 382 199 4 16 396 19 396 1.18e-117 353
MS.gene52365.t1 AT5G61520 46.448 366 186 5 18 376 18 380 7.03e-117 352
MS.gene52365.t1 AT5G26250 45.946 370 197 3 10 378 8 375 3.24e-112 340
MS.gene52365.t1 AT3G05960 45.135 370 200 3 10 378 7 374 1.50e-108 330
MS.gene52365.t1 AT1G77210 43.750 384 209 6 16 396 18 397 4.14e-106 324
MS.gene52365.t1 AT1G77210 43.750 384 209 6 16 396 18 397 4.14e-106 324
MS.gene52365.t1 AT1G07340 43.829 397 215 5 5 398 4 395 4.85e-106 323
MS.gene52365.t1 AT5G61520 44.910 334 174 5 50 376 2 332 2.09e-101 310
MS.gene52365.t1 AT1G50310 47.791 249 126 4 152 398 11 257 1.60e-73 236
MS.gene52365.t1 AT1G77210 39.676 247 143 5 152 396 6 248 3.04e-57 192
MS.gene52365.t1 AT3G18830 28.889 360 216 7 28 366 40 380 9.84e-39 147
MS.gene52365.t1 AT2G16120 28.889 360 216 9 28 366 30 370 3.04e-37 142
MS.gene52365.t1 AT2G16130 29.565 345 205 8 28 353 30 355 9.16e-37 141
MS.gene52365.t1 AT2G18480 29.714 350 206 8 38 366 36 366 5.57e-36 139
MS.gene52365.t1 AT2G20780 27.762 353 229 7 21 366 51 384 7.65e-35 136
MS.gene52365.t1 AT1G30220 31.692 325 197 7 35 352 39 345 9.38e-35 136
MS.gene52365.t1 AT2G20780 29.123 285 196 3 88 366 42 326 8.19e-34 132
MS.gene52365.t1 AT5G16150 27.059 340 221 5 17 353 98 413 2.12e-33 132
MS.gene52365.t1 AT5G16150 27.059 340 221 5 17 353 98 413 2.12e-33 132
MS.gene52365.t1 AT5G16150 27.059 340 221 5 17 353 98 413 2.12e-33 132
MS.gene52365.t1 AT4G16480 30.423 355 218 8 35 379 38 373 2.29e-33 132
MS.gene52365.t1 AT4G16480 30.423 355 218 8 35 379 38 373 2.29e-33 132
MS.gene52365.t1 AT4G16480 30.423 355 218 8 35 379 38 373 2.29e-33 132
MS.gene52365.t1 AT2G48020 28.269 283 194 3 83 364 68 342 2.70e-33 129
MS.gene52365.t1 AT4G36670 27.371 369 226 8 28 374 21 369 5.80e-33 130
MS.gene52365.t1 AT1G54730 28.701 331 193 9 30 352 38 333 6.03e-33 127
MS.gene52365.t1 AT2G48020 28.269 283 194 3 83 364 68 342 8.06e-33 129
MS.gene52365.t1 AT2G48020 28.269 283 194 3 83 364 68 342 8.06e-33 129
MS.gene52365.t1 AT1G75220 26.870 361 238 4 21 381 45 379 9.11e-33 129
MS.gene52365.t1 AT1G54730 28.701 331 193 9 30 352 38 333 1.61e-32 128
MS.gene52365.t1 AT1G54730 28.701 331 193 9 30 352 38 333 1.61e-32 128
MS.gene52365.t1 AT1G54730 26.738 374 241 8 30 402 38 379 1.74e-32 128
MS.gene52365.t1 AT1G54730 26.738 374 241 8 30 402 38 379 2.54e-32 128
MS.gene52365.t1 AT2G48020 27.778 270 187 2 83 352 68 329 8.09e-32 125
MS.gene52365.t1 AT1G54730 28.188 298 190 4 30 327 38 311 2.01e-31 123
MS.gene52365.t1 AT1G54730 28.188 298 190 4 30 327 38 311 2.01e-31 123
MS.gene52365.t1 AT1G08930 26.934 349 219 7 9 352 42 359 2.31e-31 125
MS.gene52365.t1 AT1G08930 26.934 349 219 7 9 352 42 359 2.31e-31 125
MS.gene52365.t1 AT1G54730 29.085 306 177 8 30 327 38 311 3.98e-31 123
MS.gene52365.t1 AT1G54730 29.085 306 177 8 30 327 38 311 5.70e-31 123
MS.gene52365.t1 AT3G05160 26.989 352 228 6 17 366 14 338 6.50e-31 124
MS.gene52365.t1 AT1G54730 29.085 306 177 8 30 327 38 311 1.03e-30 123
MS.gene52365.t1 AT1G19450 28.094 299 208 2 83 381 89 380 1.25e-30 124
MS.gene52365.t1 AT3G05400 28.470 281 192 4 83 362 66 338 8.86e-30 121
MS.gene52365.t1 AT3G05165 26.989 352 228 6 17 366 23 347 8.91e-30 121
MS.gene52365.t1 AT3G05165 26.989 352 228 6 17 366 23 347 8.91e-30 121
MS.gene52365.t1 AT3G05165 26.989 352 228 6 17 366 23 347 8.91e-30 121
MS.gene52365.t1 AT3G05165 26.989 352 228 6 17 366 23 347 9.36e-30 121
MS.gene52365.t1 AT3G05165 26.989 352 228 6 17 366 23 347 9.36e-30 121
MS.gene52365.t1 AT3G05165 26.989 352 228 6 17 366 23 347 1.02e-29 121
MS.gene52365.t1 AT2G35740 27.616 344 221 7 35 368 37 362 1.33e-29 121
MS.gene52365.t1 AT1G08900 26.266 316 221 4 83 398 23 326 1.97e-29 119
MS.gene52365.t1 AT3G05160 28.521 284 193 4 85 366 14 289 2.13e-29 119
MS.gene52365.t1 AT3G05160 28.521 284 193 4 85 366 14 289 2.13e-29 119
MS.gene52365.t1 AT1G08900 26.266 316 221 4 83 398 65 368 2.48e-29 119
MS.gene52365.t1 AT5G17010 26.180 466 264 11 22 419 45 498 3.48e-29 119
MS.gene52365.t1 AT5G17010 26.180 466 264 11 22 419 45 498 3.48e-29 119
MS.gene52365.t1 AT5G17010 26.180 466 264 11 22 419 45 498 3.48e-29 119
MS.gene52365.t1 AT1G08900 26.266 316 221 4 83 398 57 360 3.92e-29 119
MS.gene52365.t1 AT1G08900 26.266 316 221 4 83 398 65 368 5.24e-29 119
MS.gene52365.t1 AT1G08900 26.266 316 221 4 83 398 65 368 5.24e-29 119
MS.gene52365.t1 AT3G05400 31.727 249 158 5 117 362 79 318 1.57e-28 117
MS.gene52365.t1 AT5G27350 24.931 361 241 6 5 363 12 344 5.08e-28 116
MS.gene52365.t1 AT3G05150 29.195 298 195 4 83 375 75 361 3.12e-27 114
MS.gene52365.t1 AT3G05150 29.195 298 195 4 83 375 75 361 3.12e-27 114
MS.gene52365.t1 AT1G67300 27.719 285 190 6 93 374 103 374 3.29e-27 113
MS.gene52365.t1 AT1G67300 27.719 285 190 6 93 374 103 374 3.29e-27 113
MS.gene52365.t1 AT1G67300 27.719 285 190 6 93 374 103 374 4.08e-27 113
MS.gene52365.t1 AT1G67300 27.719 285 190 6 93 374 103 374 4.08e-27 113
MS.gene52365.t1 AT3G05150 29.195 298 195 4 83 375 75 361 4.53e-27 113
MS.gene52365.t1 AT1G67300 27.719 285 190 6 93 374 103 374 5.35e-27 113
MS.gene52365.t1 AT1G67300 27.719 285 190 6 93 374 103 374 5.35e-27 113
MS.gene52365.t1 AT1G05030 24.409 381 258 9 22 399 77 430 7.90e-27 113
MS.gene52365.t1 AT3G05155 24.923 325 222 8 83 406 67 370 1.13e-26 112
MS.gene52365.t1 AT1G67300 27.437 277 192 5 93 366 103 373 1.41e-26 112
MS.gene52365.t1 AT4G04760 28.873 284 190 5 83 362 12 287 1.45e-26 111
MS.gene52365.t1 AT4G04760 29.259 270 180 4 83 349 71 332 1.61e-26 112
MS.gene52365.t1 AT5G59250 27.299 348 224 8 23 354 97 431 1.72e-26 112
MS.gene52365.t1 AT3G05155 24.723 271 191 4 83 352 67 325 2.14e-26 109
MS.gene52365.t1 AT4G04760 28.873 284 190 5 83 362 71 346 2.84e-26 111
MS.gene52365.t1 AT1G05030 25.316 316 222 6 88 399 73 378 7.27e-26 110
MS.gene52365.t1 AT1G79820 24.540 326 220 6 29 352 59 360 1.16e-25 108
MS.gene52365.t1 AT5G27360 23.304 339 229 5 17 353 28 337 1.19e-25 108
MS.gene52365.t1 AT5G27360 23.304 339 229 5 17 353 28 337 1.76e-25 108
MS.gene52365.t1 AT5G27360 23.304 339 229 5 17 353 76 385 1.88e-25 109
MS.gene52365.t1 AT1G08890 27.302 315 215 6 83 396 67 368 2.07e-25 108
MS.gene52365.t1 AT1G79820 24.540 326 220 6 29 352 59 360 2.12e-25 108
MS.gene52365.t1 AT1G79820 24.540 326 220 6 29 352 59 360 2.12e-25 108
MS.gene52365.t1 AT4G04750 27.491 291 199 4 83 369 76 358 7.60e-25 107
MS.gene52365.t1 AT4G04750 27.491 291 199 4 83 369 76 358 7.60e-25 107
MS.gene52365.t1 AT4G04750 27.491 291 199 4 83 369 120 402 9.15e-25 107
MS.gene52365.t1 AT3G20460 26.335 281 195 5 83 362 93 362 1.03e-23 103
MS.gene52365.t1 AT3G03090 25.442 452 257 11 36 419 59 498 1.64e-23 103
MS.gene52365.t1 AT5G27360 25.893 224 158 3 130 353 18 233 9.09e-23 99.8
MS.gene52365.t1 AT5G27360 25.893 224 158 3 130 353 18 233 9.09e-23 99.8
MS.gene52365.t1 AT5G18840 24.306 288 210 3 83 369 84 364 1.06e-22 100
MS.gene52365.t1 AT1G08920 25.714 280 190 6 83 356 72 339 1.80e-22 99.8
MS.gene52365.t1 AT1G08920 25.714 280 190 6 83 356 72 339 1.84e-22 100
MS.gene52365.t1 AT2G43330 26.087 345 231 7 28 366 35 361 2.38e-22 99.8
MS.gene52365.t1 AT1G08920 25.182 274 189 5 83 352 72 333 4.51e-22 99.0
MS.gene52365.t1 AT3G51490 31.383 188 125 4 88 273 2 187 9.47e-21 95.5
MS.gene52365.t1 AT5G17010 25.000 444 237 12 22 419 42 435 1.07e-20 94.4
MS.gene52365.t1 AT3G51490 31.383 188 125 4 88 273 52 237 1.17e-20 95.5
MS.gene52365.t1 AT3G51490 31.383 188 125 4 88 273 52 237 1.22e-20 95.1
MS.gene52365.t1 AT1G79820 22.925 253 177 3 29 281 59 293 6.00e-17 83.2
MS.gene52365.t1 AT1G20840 26.702 191 137 3 91 279 52 241 1.40e-16 82.8
MS.gene52365.t1 AT1G20840 26.702 191 137 3 91 279 52 241 1.40e-16 82.8
MS.gene52365.t1 AT4G35300 32.184 174 114 4 88 259 52 223 1.89e-16 82.4
MS.gene52365.t1 AT4G35300 32.184 174 114 4 88 259 52 223 1.89e-16 82.4
MS.gene52365.t1 AT4G35300 32.184 174 114 4 88 259 52 223 1.89e-16 82.4
MS.gene52365.t1 AT4G35300 32.184 174 114 4 88 259 52 223 1.91e-16 82.4
MS.gene52365.t1 AT4G35300 32.184 174 114 4 88 259 52 223 1.91e-16 82.4
MS.gene52365.t1 AT4G35300 32.184 174 114 4 88 259 52 223 1.91e-16 82.4
MS.gene52365.t1 AT4G35300 32.184 174 114 4 88 259 52 223 1.91e-16 82.4
MS.gene52365.t1 AT4G35300 32.184 174 114 4 88 259 52 223 1.91e-16 82.4
MS.gene52365.t1 AT4G35300 32.184 174 114 4 88 259 52 223 1.91e-16 82.4
MS.gene52365.t1 AT4G35300 32.184 174 114 4 88 259 52 223 1.91e-16 82.4
MS.gene52365.t1 AT1G79820 25.000 156 116 1 126 281 77 231 1.74e-12 68.9

Find 98 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAGTCAATGTACATTATA+TGG 0.160882 3.1:+60876036 MS.gene52365:CDS
CTTGCTGGTGCTGCTATTAA+TGG 0.178937 3.1:+60874386 MS.gene52365:CDS
GCAGCCTTTCTTAGAATATC+TGG 0.181761 3.1:-60874203 None:intergenic
GGTCGTATTCTTCTTGGTTT+TGG 0.185325 3.1:+60874440 MS.gene52365:CDS
GGATATGACATTGGGATTTC+AGG 0.189475 3.1:+60871733 MS.gene52365:CDS
ATCCTTGGTCGTATTCTTCT+TGG 0.222527 3.1:+60874434 MS.gene52365:CDS
CTGAAATTGCTCCACCAAAA+TGG 0.273388 3.1:+60874839 MS.gene52365:CDS
CTCTTTCAATCTGTGGGTTT+AGG 0.277247 3.1:+60875288 MS.gene52365:CDS
CTGAAAGCACCTCGCCATTT+TGG 0.278725 3.1:-60874853 None:intergenic
GGTGGTGCCATCTTTCTTGC+TGG 0.282200 3.1:+60874371 MS.gene52365:CDS
AGTGCAAGAAGAGCCATTTA+TGG 0.283180 3.1:+60875161 MS.gene52365:CDS
CTCTCAAATATGGCCATAAA+TGG 0.291863 3.1:-60875174 None:intergenic
ACCGGCTTTCAATTCTTCTT+AGG 0.292724 3.1:+60874877 MS.gene52365:CDS
TCGATATTGTCTCTCAAATA+TGG 0.303768 3.1:-60875184 None:intergenic
TATGGGGCAAACATTGGTTT+TGG 0.323870 3.1:+60876054 MS.gene52365:CDS
TTACTTTCTGCCGTTATTCT+CGG 0.329320 3.1:+60875324 MS.gene52365:CDS
CATTCTAATGCTTGTCTGTC+TGG 0.337879 3.1:+60875428 MS.gene52365:CDS
CGAAGATTCTTGTTCATTAC+GGG 0.343244 3.1:+60875402 MS.gene52365:CDS
GATGGCACCACCCAACATTA+TGG 0.359537 3.1:-60874360 None:intergenic
GCCACGTTCAACCAAGCTGC+TGG 0.360284 3.1:-60875034 None:intergenic
TCGAAGATTCTTGTTCATTA+CGG 0.369531 3.1:+60875401 MS.gene52365:CDS
GGAGTCAATGTACATTATAT+GGG 0.376356 3.1:+60876037 MS.gene52365:CDS
GGGAAGAATTTATTGAGAAA+TGG 0.402684 3.1:-60874182 None:intergenic
TCTGCAATGCTGTCCTGGCT+TGG 0.407292 3.1:-60875065 None:intergenic
GGGCAACGCAACATTGGTAT+TGG 0.408706 3.1:+60875743 MS.gene52365:CDS
TGGGGCTGGCGACTCTCTCT+TGG 0.414296 3.1:+60874952 MS.gene52365:CDS
TGACTCCAAAGCAATTCCTT+TGG 0.421772 3.1:-60876021 None:intergenic
CTTCCCAGATATTCTAAGAA+AGG 0.422736 3.1:+60874199 MS.gene52365:CDS
TTTCAATTCTTCTTAGGAGT+TGG 0.427380 3.1:+60874883 MS.gene52365:CDS
AAAGCAATTCCTTTGGTCTC+AGG 0.428168 3.1:-60876014 None:intergenic
CCCACAGATTGAAAGAGGTT+TGG 0.431157 3.1:-60875282 None:intergenic
TGAGACCAAAGGAATTGCTT+TGG 0.446229 3.1:+60876016 MS.gene52365:CDS
CCTGCAGCCGTGATGACAAT+TGG 0.446393 3.1:+60874988 MS.gene52365:CDS
CTAAACCCACAGATTGAAAG+AGG 0.452624 3.1:-60875287 None:intergenic
GCTTTGACGACTGGTATTCA+TGG 0.460359 3.1:+60875702 MS.gene52365:CDS
AATATTGTTATGCTCATCCT+TGG 0.469597 3.1:+60874419 MS.gene52365:CDS
GCAATTTCAGAAAGGTATAG+TGG 0.472124 3.1:-60874826 None:intergenic
CCAAACCTCTTTCAATCTGT+GGG 0.474306 3.1:+60875282 MS.gene52365:CDS
GCCATTCGAAGGTGCATCAA+TGG 0.477746 3.1:-60871641 None:intergenic
CCAATTGTCATCACGGCTGC+AGG 0.478121 3.1:-60874988 None:intergenic
TCGCCAGCCCCATGTGTGCT+TGG 0.478528 3.1:-60874941 None:intergenic
GGAGTTGGCGTGGTTGCTGC+AGG 0.481761 3.1:+60874898 MS.gene52365:CDS
ACCAAACCTCTTTCAATCTG+TGG 0.482629 3.1:+60875281 MS.gene52365:CDS
TGTATTGTTGCTGCATCTAG+TGG 0.488167 3.1:+60871700 MS.gene52365:CDS
ACGCGACCGCCAAGCACACA+TGG 0.491049 3.1:+60874932 MS.gene52365:CDS
CCGCCAAGCACACATGGGGC+TGG 0.492419 3.1:+60874938 MS.gene52365:CDS
GCTTTGCTAGCTTTGACGAC+TGG 0.494629 3.1:+60875693 MS.gene52365:CDS
TTACTATGTTTCTATGCCGC+AGG 0.496329 3.1:+60875768 MS.gene52365:CDS
GCCATTGATGCACCTTCGAA+TGG 0.498649 3.1:+60871640 MS.gene52365:CDS
TGGCGAGGTGCTTTCAGCAC+CGG 0.501233 3.1:+60874859 MS.gene52365:CDS
CAGCCTTTCTTAGAATATCT+GGG 0.503890 3.1:-60874202 None:intergenic
CAACAAAAGCAGTTGAGACT+AGG 0.518496 3.1:-60875368 None:intergenic
ATCCTCCATCGATGTTGAGC+CGG 0.528672 3.1:+60875098 MS.gene52365:CDS
TGCTGGGTGTGTCGGATATG+AGG 0.531185 3.1:-60875017 None:intergenic
CCAGCCCCATGTGTGCTTGG+CGG 0.531705 3.1:-60874938 None:intergenic
CCACGTTCAACCAAGCTGCT+GGG 0.533955 3.1:-60875033 None:intergenic
ACATTATATGGGGCAAACAT+TGG 0.535333 3.1:+60876048 MS.gene52365:CDS
AACCAAGCTGCTGGGTGTGT+CGG 0.542991 3.1:-60875025 None:intergenic
TGTTAAAGGAGAAGTTGAGA+AGG 0.546071 3.1:+60876085 MS.gene52365:CDS
AGCAGCACCAGCAAGAAAGA+TGG 0.549935 3.1:-60874378 None:intergenic
AGCAAAGTCACTGCAGCTAT+CGG 0.550701 3.1:+60874326 MS.gene52365:CDS
GCACCTTCGAATGGCTTCGA+CGG 0.551765 3.1:+60871649 MS.gene52365:CDS
GTTGACGAGTCCGAGAATAA+CGG 0.552173 3.1:-60875334 None:intergenic
ATATCGACCTCACTTAATCA+TGG 0.560389 3.1:+60875200 MS.gene52365:CDS
TGTTGACATACATGGCAACA+TGG 0.560740 3.1:-60871395 None:intergenic
ATCCGACACACCCAGCAGCT+TGG 0.562187 3.1:+60875023 MS.gene52365:CDS
TTGGTGGAGCAATTTCAGAA+AGG 0.562320 3.1:-60874834 None:intergenic
TGGTACAAAGGACATGTCAA+AGG 0.564689 3.1:+60875722 MS.gene52365:CDS
AGTTAGAAGAACTCATTAAG+TGG 0.568139 3.1:+60875121 MS.gene52365:CDS
TAACTCCGGCTCAACATCGA+TGG 0.573428 3.1:-60875103 None:intergenic
GGTACAAAGGACATGTCAAA+GGG 0.573765 3.1:+60875723 MS.gene52365:CDS
TCCTAAGAAGAATTGAAAGC+CGG 0.575070 3.1:-60874878 None:intergenic
TTAATGAGTTCTTCTAACTC+CGG 0.578406 3.1:-60875117 None:intergenic
GTCAAAGGGCAACGCAACAT+TGG 0.579145 3.1:+60875737 MS.gene52365:CDS
GCTGGTGCTGCTATTAATGG+AGG 0.590975 3.1:+60874389 MS.gene52365:CDS
CGCGACCGCCAAGCACACAT+GGG 0.593701 3.1:+60874933 MS.gene52365:CDS
GTGGCAAGATAGACCAAGCC+AGG 0.594528 3.1:+60875052 MS.gene52365:CDS
GGTTGAAAATGGCAGGTGGG+GGG 0.597159 3.1:+60871614 MS.gene52365:intron
GAGTCAATGTACATTATATG+GGG 0.599950 3.1:+60876038 MS.gene52365:CDS
GATATTCTAAGAAAGGCTGC+TGG 0.607230 3.1:+60874206 MS.gene52365:CDS
CCCAGCAGCTTGGTTGAACG+TGG 0.607250 3.1:+60875033 MS.gene52365:CDS
TTTCCGTCGAAGCCATTCGA+AGG 0.608818 3.1:-60871652 None:intergenic
AGATTCTTGTTCATTACGGG+TGG 0.611668 3.1:+60875405 MS.gene52365:CDS
CTCCGGCTCAACATCGATGG+AGG 0.621460 3.1:-60875100 None:intergenic
GAAGGCACCAATTGTCATCA+CGG 0.622211 3.1:-60874995 None:intergenic
ACTCTCTCTTGGACTAGCAG+TGG 0.636345 3.1:+60874963 MS.gene52365:CDS
TTCAGGAGGTGTTACAACAA+TGG 0.637356 3.1:+60874157 MS.gene52365:intron
ATTCTTCTTAGGAGTTGGCG+TGG 0.637882 3.1:+60874888 MS.gene52365:CDS
GACTGGTATTCATGGTACAA+AGG 0.648697 3.1:+60875710 MS.gene52365:CDS
ACAGCATTGCAGAAAATCAG+AGG 0.650938 3.1:+60875075 MS.gene52365:CDS
GTTGACATACATGGCAACAT+GGG 0.664814 3.1:-60871394 None:intergenic
GCAAATGCCATGATTAAGTG+AGG 0.668086 3.1:-60875207 None:intergenic
GCGACCGCCAAGCACACATG+GGG 0.668399 3.1:+60874934 MS.gene52365:CDS
GGGTGTGTCGGATATGAGGA+AGG 0.669650 3.1:-60875013 None:intergenic
ATTGCTCCACCAAAATGGCG+AGG 0.680520 3.1:+60874844 MS.gene52365:CDS
TTGAGACTAGGATAGAAGCA+AGG 0.681588 3.1:-60875356 None:intergenic
AACCAAGAAGAATACGACCA+AGG 0.682921 3.1:-60874436 None:intergenic
TCTGTGGGTTTAGGAAACAA+CGG 0.704878 3.1:+60875297 MS.gene52365:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGTTAAATTAAAAAAGA+GGG - chr3.1:60874577-60874596 None:intergenic 10.0%
!! AAACAAAAAAATGAAAAAAA+AGG + chr3.1:60873492-60873511 MS.gene52365:intron 10.0%
!! AAACAAAAAAATGAAAAAAA+AGG - chr3.1:60873511-60873492 None:intergenic 10.0%
!! ATTAAAATGATTTAATGAAT+TGG + chr3.1:60873319-60873338 MS.gene52365:intron 10.0%
!! CTGAAAAAATTTAAAAAAAT+TGG + chr3.1:60872443-60872462 MS.gene52365:intron 10.0%
!! TAAAAAATTAGAAAAAAGTT+CGG - chr3.1:60873123-60873142 None:intergenic 10.0%
!! TAAAAGTTAAATTAAAAAAG+AGG - chr3.1:60874578-60874597 None:intergenic 10.0%
!! TAAATAATATTATACACATA+TGG - chr3.1:60875470-60875489 None:intergenic 10.0%
!! TGAAAAAATTTAAAAAAAGA+GGG + chr3.1:60872238-60872257 MS.gene52365:intron 10.0%
!! TGAAAAAATTTAAAAAAAGA+GGG - chr3.1:60872257-60872238 None:intergenic 10.0%
!! TGAAAAAATTTAAAAGAATT+TGG - chr3.1:60873563-60873582 None:intergenic 10.0%
!! TGAAAAATTAAAAAAAAAGA+GGG - chr3.1:60873472-60873491 None:intergenic 10.0%
!! TTGAAAAAATTAAAAAAAAC+GGG + chr3.1:60872384-60872403 MS.gene52365:intron 10.0%
!! TTGAAAAAATTTAAAAAAAG+AGG + chr3.1:60872237-60872256 MS.gene52365:intron 10.0%
!! TTGAAAAAATTTAAAAAAAG+AGG - chr3.1:60872256-60872237 None:intergenic 10.0%
!! TTGAAAAATTAAAAAAAAAG+AGG - chr3.1:60873473-60873492 None:intergenic 10.0%
!! TTTATAATGAAAAAACAAAA+AGG - chr3.1:60871766-60871785 None:intergenic 10.0%
!!! TTATTTTGTAAAAAGATAAT+CGG + chr3.1:60873249-60873268 MS.gene52365:intron 10.0%
!!! TTTAATTTTCATATTGTAAT+TGG - chr3.1:60872708-60872727 None:intergenic 10.0%
!!! TTTAATTTTTCTATTGTAAT+TGG + chr3.1:60872976-60872995 MS.gene52365:intron 10.0%
!! ATATAACTCAAGAATTAAAT+TGG + chr3.1:60873939-60873958 MS.gene52365:intron 15.0%
!! ATTAAAATGATTTAATGATG+TGG - chr3.1:60872537-60872556 None:intergenic 15.0%
!! TAAGAATGAAAAAAAAAATC+TGG - chr3.1:60873530-60873549 None:intergenic 15.0%
!! TAGAAGATATTTAAAAATAC+TGG - chr3.1:60873085-60873104 None:intergenic 15.0%
!! TGAAAAAATTAAAAAAAACG+GGG + chr3.1:60872385-60872404 MS.gene52365:intron 15.0%
!!! AAAACATTTTCTTTCATTTT+GGG - chr3.1:60871853-60871872 None:intergenic 15.0%
!!! AACATTTTTCATTAGTAAAA+AGG - chr3.1:60874131-60874150 None:intergenic 15.0%
!!! AAGCAAATTTATTTTAAACA+TGG - chr3.1:60874768-60874787 None:intergenic 15.0%
!!! ACATTTTTCATTAGTAAAAA+GGG - chr3.1:60874130-60874149 None:intergenic 15.0%
!!! AGTAGCAATATTTTAAATAA+AGG - chr3.1:60874727-60874746 None:intergenic 15.0%
!!! TAAAACATTTTCTTTCATTT+TGG - chr3.1:60871854-60871873 None:intergenic 15.0%
!!! TTTTAAAAAGTGTCTTATTT+AGG - chr3.1:60872829-60872848 None:intergenic 15.0%
!!! TTTTATCTTCAAAATTTACT+TGG + chr3.1:60874079-60874098 MS.gene52365:intron 15.0%
!!! TTTTTTGAGAAATAAAAAAC+TGG + chr3.1:60872637-60872656 MS.gene52365:intron 15.0%
!!! TTTTTTGCAAAATAAAAAAC+TGG - chr3.1:60873030-60873049 None:intergenic 15.0%
!! AAAATAAAAAACTGGAAATC+TGG - chr3.1:60873022-60873041 None:intergenic 20.0%
!! ACATAAAAATCATAATGTTG+TGG + chr3.1:60874683-60874702 MS.gene52365:intron 20.0%
!! TAAATTAAAAAAGAGGGAAA+TGG - chr3.1:60874571-60874590 None:intergenic 20.0%
!! TAAGAATGAAAACAAAAATC+TGG + chr3.1:60872475-60872494 MS.gene52365:intron 20.0%
!! TAAGAATGAAAACAAAAATC+TGG - chr3.1:60872494-60872475 None:intergenic 20.0%
!! TCAAATCATTCAAATTGAAA+AGG - chr3.1:60873917-60873936 None:intergenic 20.0%
!! TGAAAAATGTTATCAAATTC+AGG + chr3.1:60874140-60874159 MS.gene52365:intron 20.0%
!!! AACATTGCTATTTAAAATTG+TGG - chr3.1:60874602-60874621 None:intergenic 20.0%
!!! AATATTCTTAATAGCACTTT+TGG + chr3.1:60873689-60873708 MS.gene52365:intron 20.0%
!!! AATATTCTTAATAGCACTTT+TGG - chr3.1:60873708-60873689 None:intergenic 20.0%
!!! AATTTTAGTTCAAAAGAGAT+TGG + chr3.1:60872762-60872781 MS.gene52365:intron 20.0%
!!! TACTACTAATAGTTTTCAAT+TGG + chr3.1:60871943-60871962 MS.gene52365:intron 20.0%
!!! TTTTGTAGTTTTCAAAGATA+GGG + chr3.1:60873841-60873860 MS.gene52365:intron 20.0%
! AAAAAAAACTTCCCAGATAA+TGG + chr3.1:60873998-60874017 MS.gene52365:intron 25.0%
! AAAAAAACTTCCCAGATAAT+GGG + chr3.1:60873999-60874018 MS.gene52365:intron 25.0%
! AAAATGTTATCAAATTCAGG+AGG + chr3.1:60874143-60874162 MS.gene52365:intron 25.0%
! ATTGTATTACATGATGCAAT+TGG + chr3.1:60874792-60874811 MS.gene52365:intron 25.0%
! GATCAAATATAGTTGTATCT+TGG + chr3.1:60874652-60874671 MS.gene52365:intron 25.0%
! TAAAGGATGCTATCAAAATT+TGG - chr3.1:60874710-60874729 None:intergenic 25.0%
! TAGACGGAGAAATTAAAATA+AGG - chr3.1:60875604-60875623 None:intergenic 25.0%
!! GTTTTGTAGTTTTCAAAGAT+AGG + chr3.1:60873840-60873859 MS.gene52365:intron 25.0%
!! TTGTAGTTTTCAAAGATAGA+GGG - chr3.1:60872017-60872036 None:intergenic 25.0%
!! TTTCTTGTTCTATGCATTTT+GGG + chr3.1:60875956-60875975 MS.gene52365:intron 25.0%
!! TTTGTAGTTTTCAAAGATAG+AGG - chr3.1:60873861-60873842 None:intergenic 25.0%
!! TTTGTAGTTTTCAAAGATAG+GGG + chr3.1:60873842-60873861 MS.gene52365:intron 25.0%
!!! TCATTTTTGGATATGACATT+GGG + chr3.1:60871725-60871744 MS.gene52365:CDS 25.0%
AATATTGTTATGCTCATCCT+TGG + chr3.1:60874419-60874438 MS.gene52365:CDS 30.0%
AGCAAAAAACATGCTCTAAT+TGG - chr3.1:60871793-60871812 None:intergenic 30.0%
AGTTAGAAGAACTCATTAAG+TGG + chr3.1:60875121-60875140 MS.gene52365:CDS 30.0%
CCTGTAAACTGTTGAAAAAA+CGG - chr3.1:60875237-60875256 None:intergenic 30.0%
CGAAAAAACACCATAATGTT+GGG + chr3.1:60874350-60874369 MS.gene52365:CDS 30.0%
CTGTAAACTGTTGAAAAAAC+GGG - chr3.1:60875236-60875255 None:intergenic 30.0%
GAAGAGCTACTATTACTAAT+TGG + chr3.1:60871567-60871586 MS.gene52365:intron 30.0%
GAATTAAATTGGACTCAACA+AGG + chr3.1:60873950-60873969 MS.gene52365:intron 30.0%
GAGTCAATGTACATTATATG+GGG + chr3.1:60876038-60876057 MS.gene52365:CDS 30.0%
GGAGTCAATGTACATTATAT+GGG + chr3.1:60876037-60876056 MS.gene52365:CDS 30.0%
GGGAAGAATTTATTGAGAAA+TGG - chr3.1:60874185-60874204 None:intergenic 30.0%
GTTTGTCAAAATTGCGATTT+CGG - chr3.1:60873869-60873888 None:intergenic 30.0%
TAAGGACGAAAATTTAGAGA+CGG - chr3.1:60875586-60875605 None:intergenic 30.0%
TCGAAAAAACACCATAATGT+TGG + chr3.1:60874349-60874368 MS.gene52365:CDS 30.0%
TCGAAGATTCTTGTTCATTA+CGG + chr3.1:60875401-60875420 MS.gene52365:CDS 30.0%
TCGATATTGTCTCTCAAATA+TGG - chr3.1:60875187-60875206 None:intergenic 30.0%
TGGAGTCAATGTACATTATA+TGG + chr3.1:60876036-60876055 MS.gene52365:CDS 30.0%
TTAATGAGTTCTTCTAACTC+CGG - chr3.1:60875120-60875139 None:intergenic 30.0%
TTACATGATGCAATTGGAAA+AGG + chr3.1:60874798-60874817 MS.gene52365:intron 30.0%
TTTAAGGGGAAAATTTCACT+TGG - chr3.1:60875831-60875850 None:intergenic 30.0%
TTTCAATTCTTCTTAGGAGT+TGG + chr3.1:60874883-60874902 MS.gene52365:CDS 30.0%
! AAAAGGCTTAATAGCACTTT+TGG - chr3.1:60873900-60873919 None:intergenic 30.0%
! CCAGTTGTTCTGATTTTTAA+GGG - chr3.1:60875846-60875865 None:intergenic 30.0%
! CTTTCTTGTTCTATGCATTT+TGG + chr3.1:60875955-60875974 MS.gene52365:intron 30.0%
! TCCAGTTGTTCTGATTTTTA+AGG - chr3.1:60875847-60875866 None:intergenic 30.0%
! TTGTAGTTTTCAAAGATAGG+GGG + chr3.1:60873843-60873862 MS.gene52365:intron 30.0%
!! AATTGGCTTAATAGCACTTT+TGG + chr3.1:60871960-60871979 MS.gene52365:intron 30.0%
!! ATCGCAATTTTGACAAACAT+AGG + chr3.1:60873871-60873890 MS.gene52365:intron 30.0%
!! CAGTTGTTCTGATTTTTAAG+GGG - chr3.1:60875845-60875864 None:intergenic 30.0%
!! CTCATTTTTGGATATGACAT+TGG + chr3.1:60871724-60871743 MS.gene52365:CDS 30.0%
!! TCGCAATTTTGACAAACATA+GGG + chr3.1:60873872-60873891 MS.gene52365:intron 30.0%
!! TTAGCTTTATCTATACTCCT+AGG + chr3.1:60871538-60871557 MS.gene52365:intron 30.0%
!! TTAGTTAGAGTGTTGGAATT+TGG + chr3.1:60871471-60871490 MS.gene52365:intron 30.0%
!!! CGTTTTTTCAACAGTTTACA+GGG + chr3.1:60875235-60875254 MS.gene52365:CDS 30.0%
AAAAACACCATAATGTTGGG+TGG + chr3.1:60874353-60874372 MS.gene52365:CDS 35.0%
AACTATTAGTACCAAACCAC+AGG - chr3.1:60875636-60875655 None:intergenic 35.0%
AATTTCACTTGGAATTAGCC+AGG - chr3.1:60875820-60875839 None:intergenic 35.0%
ACATTATATGGGGCAAACAT+TGG + chr3.1:60876048-60876067 MS.gene52365:CDS 35.0%
ATATCGACCTCACTTAATCA+TGG + chr3.1:60875200-60875219 MS.gene52365:CDS 35.0%
CAGCCTTTCTTAGAATATCT+GGG - chr3.1:60874205-60874224 None:intergenic 35.0%
CCCTTAAAAATCAGAACAAC+TGG + chr3.1:60875843-60875862 MS.gene52365:intron 35.0%
CGAAGATTCTTGTTCATTAC+GGG + chr3.1:60875402-60875421 MS.gene52365:CDS 35.0%
CTCTCAAATATGGCCATAAA+TGG - chr3.1:60875177-60875196 None:intergenic 35.0%
CTGTGAAGCTTGAATTACAT+AGG - chr3.1:60872889-60872908 None:intergenic 35.0%
GGAGTATAGATAAAGCTAAG+AGG - chr3.1:60871537-60871556 None:intergenic 35.0%
GTTTGCCAAAATTGCGATTA+AGG + chr3.1:60871991-60872010 MS.gene52365:intron 35.0%
TCCTAAGAAGAATTGAAAGC+CGG - chr3.1:60874881-60874900 None:intergenic 35.0%
TGCATTGTTAGTTAGAGTGT+TGG + chr3.1:60871464-60871483 MS.gene52365:intron 35.0%
TGTTAAAGGAGAAGTTGAGA+AGG + chr3.1:60876085-60876104 MS.gene52365:CDS 35.0%
TTACTTTCTGCCGTTATTCT+CGG + chr3.1:60875324-60875343 MS.gene52365:CDS 35.0%
TTGTCCAAAACCCATTATCT+GGG - chr3.1:60874012-60874031 None:intergenic 35.0%
TTTGTCCAAAACCCATTATC+TGG - chr3.1:60874013-60874032 None:intergenic 35.0%
! ATCGCAACTTTTGCAAACAT+AGG - chr3.1:60873718-60873737 None:intergenic 35.0%
! CTTCCCAGATATTCTAAGAA+AGG + chr3.1:60874199-60874218 MS.gene52365:CDS 35.0%
! GCAATTTCAGAAAGGTATAG+TGG - chr3.1:60874829-60874848 None:intergenic 35.0%
! GTTTGCAAAAGTTGCGATTT+TGG + chr3.1:60873720-60873739 MS.gene52365:intron 35.0%
! TCGCAACTTTTGCAAACATA+GGG - chr3.1:60873717-60873736 None:intergenic 35.0%
! TTCTTTTTACCTGAGACCAA+AGG + chr3.1:60876005-60876024 MS.gene52365:CDS 35.0%
!! ATCGCAATTTTGGCAAACAT+AGG - chr3.1:60871989-60872008 None:intergenic 35.0%
!! CGCAATTTTGACAAACATAG+GGG + chr3.1:60873873-60873892 MS.gene52365:intron 35.0%
!! GCAATTTTGACAAACATAGG+GGG + chr3.1:60873874-60873893 MS.gene52365:intron 35.0%
!! GTCGTATTCTTCTTGGTTTT+GGG + chr3.1:60874441-60874460 MS.gene52365:CDS 35.0%
!! TCGCAATTTTGGCAAACATA+GGG - chr3.1:60871988-60872007 None:intergenic 35.0%
!! TCTCAACTGCTTTTGTTGAT+CGG + chr3.1:60875373-60875392 MS.gene52365:CDS 35.0%
!!! CCGTTTTTTCAACAGTTTAC+AGG + chr3.1:60875234-60875253 MS.gene52365:CDS 35.0%
!!! TCGTATTCTTCTTGGTTTTG+GGG + chr3.1:60874442-60874461 MS.gene52365:CDS 35.0%
AAAGCAATTCCTTTGGTCTC+AGG - chr3.1:60876017-60876036 None:intergenic 40.0%
AACCAAGAAGAATACGACCA+AGG - chr3.1:60874439-60874458 None:intergenic 40.0%
ACAGCATTGCAGAAAATCAG+AGG + chr3.1:60875075-60875094 MS.gene52365:CDS 40.0%
ACCAAACCTCTTTCAATCTG+TGG + chr3.1:60875281-60875300 MS.gene52365:CDS 40.0%
ACCAGGTCAAAATTGACCAT+GGG + chr3.1:60873781-60873800 MS.gene52365:intron 40.0%
ACCAGGTCAAAATTGACCAT+GGG - chr3.1:60873800-60873781 None:intergenic 40.0%
ACTGGACAAAGTATAGCAGT+TGG + chr3.1:60875861-60875880 MS.gene52365:intron 40.0%
AGAGAGGACAAGGTTGAAAA+TGG + chr3.1:60871603-60871622 MS.gene52365:intron 40.0%
AGATTCTTGTTCATTACGGG+TGG + chr3.1:60875405-60875424 MS.gene52365:CDS 40.0%
AGTAGCTCTTCTTACTACCT+AGG - chr3.1:60871558-60871577 None:intergenic 40.0%
AGTGCAAGAAGAGCCATTTA+TGG + chr3.1:60875161-60875180 MS.gene52365:CDS 40.0%
ATAGTTGTATCTTGGTCGCA+GGG + chr3.1:60874660-60874679 MS.gene52365:intron 40.0%
ATCCTTGGTCGTATTCTTCT+TGG + chr3.1:60874434-60874453 MS.gene52365:CDS 40.0%
ATCGCAACTTTGGCAAACAT+AGG + chr3.1:60872142-60872161 MS.gene52365:intron 40.0%
ATGTATGTCAACATCAAGCG+AGG + chr3.1:60871405-60871424 MS.gene52365:intron 40.0%
CAACAAAAGCAGTTGAGACT+AGG - chr3.1:60875371-60875390 None:intergenic 40.0%
CAACGAAACCGAAACATAAG+GGG + chr3.1:60873815-60873834 MS.gene52365:intron 40.0%
CAACGAAACCGAAACATAAG+GGG - chr3.1:60873834-60873815 None:intergenic 40.0%
CATTCTAATGCTTGTCTGTC+TGG + chr3.1:60875428-60875447 MS.gene52365:CDS 40.0%
CCAAACCTCTTTCAATCTGT+GGG + chr3.1:60875282-60875301 MS.gene52365:CDS 40.0%
CGATTCAACTAGTGATCTAC+TGG - chr3.1:60871914-60871933 None:intergenic 40.0%
CTAAACCCACAGATTGAAAG+AGG - chr3.1:60875290-60875309 None:intergenic 40.0%
CTCTGTAAGAACAAGAATCG+CGG - chr3.1:60874626-60874645 None:intergenic 40.0%
CTCTTTCAATCTGTGGGTTT+AGG + chr3.1:60875288-60875307 MS.gene52365:CDS 40.0%
CTGAAATTGCTCCACCAAAA+TGG + chr3.1:60874839-60874858 MS.gene52365:CDS 40.0%
GACTGGTATTCATGGTACAA+AGG + chr3.1:60875710-60875729 MS.gene52365:CDS 40.0%
GCAAATGCCATGATTAAGTG+AGG - chr3.1:60875210-60875229 None:intergenic 40.0%
GCAACGAAACCGAAACATAA+GGG + chr3.1:60873814-60873833 MS.gene52365:intron 40.0%
GCAACGAAACCGAAACATAA+GGG - chr3.1:60873833-60873814 None:intergenic 40.0%
GCAGCCTTTCTTAGAATATC+TGG - chr3.1:60874206-60874225 None:intergenic 40.0%
GGATATGACATTGGGATTTC+AGG + chr3.1:60871733-60871752 MS.gene52365:CDS 40.0%
GGTACAAAGGACATGTCAAA+GGG + chr3.1:60875723-60875742 MS.gene52365:CDS 40.0%
TAGTCGTTATACCTGTGGTT+TGG + chr3.1:60875622-60875641 MS.gene52365:intron 40.0%
TATAGTTGTATCTTGGTCGC+AGG + chr3.1:60874659-60874678 MS.gene52365:intron 40.0%
TCGCAACTTTGGCAAACATA+GGG + chr3.1:60872143-60872162 MS.gene52365:intron 40.0%
TCGCTTGATGTTGACATACA+TGG - chr3.1:60871406-60871425 None:intergenic 40.0%
TCTGTGGGTTTAGGAAACAA+CGG + chr3.1:60875297-60875316 MS.gene52365:CDS 40.0%
TGACTCCAAAGCAATTCCTT+TGG - chr3.1:60876024-60876043 None:intergenic 40.0%
TGAGACCAAAGGAATTGCTT+TGG + chr3.1:60876016-60876035 MS.gene52365:CDS 40.0%
TGCAACGAAACCGAAACATA+AGG + chr3.1:60873813-60873832 MS.gene52365:intron 40.0%
TGCAACGAAACCGAAACATA+AGG - chr3.1:60873832-60873813 None:intergenic 40.0%
TGGTACAAAGGACATGTCAA+AGG + chr3.1:60875722-60875741 MS.gene52365:CDS 40.0%
TGTATTGTTGCTGCATCTAG+TGG + chr3.1:60871700-60871719 MS.gene52365:CDS 40.0%
TTGAGACTAGGATAGAAGCA+AGG - chr3.1:60875359-60875378 None:intergenic 40.0%
TTGGTGGAGCAATTTCAGAA+AGG - chr3.1:60874837-60874856 None:intergenic 40.0%
! AAGGGTGAGCTTTATGACTT+TGG - chr3.1:60874112-60874131 None:intergenic 40.0%
! ACCGGCTTTCAATTCTTCTT+AGG + chr3.1:60874877-60874896 MS.gene52365:CDS 40.0%
! ATGCTATGCCACTTCAAGTT+TGG + chr3.1:60875930-60875949 MS.gene52365:intron 40.0%
! CGCAACTTTTGCAAACATAG+GGG - chr3.1:60873716-60873735 None:intergenic 40.0%
! GATATTCTAAGAAAGGCTGC+TGG + chr3.1:60874206-60874225 MS.gene52365:CDS 40.0%
! GCAACTTTTGCAAACATAGG+GGG - chr3.1:60873715-60873734 None:intergenic 40.0%
! GGTCGTATTCTTCTTGGTTT+TGG + chr3.1:60874440-60874459 MS.gene52365:CDS 40.0%
! GTTTGCCAAAGTTGCGATTT+TGG - chr3.1:60872140-60872159 None:intergenic 40.0%
! TTACTATGTTTCTATGCCGC+AGG + chr3.1:60875768-60875787 MS.gene52365:CDS 40.0%
! TTTCGGTTTCGTTGCACTTT+TGG + chr3.1:60872051-60872070 MS.gene52365:intron 40.0%
! TTTCGGTTTCGTTGCACTTT+TGG - chr3.1:60872070-60872051 None:intergenic 40.0%
!! AGAAAGCACCAAACTTGAAG+TGG - chr3.1:60875941-60875960 None:intergenic 40.0%
!! CGCAATTTTGGCAAACATAG+GGG - chr3.1:60871987-60872006 None:intergenic 40.0%
!! GCAATTTTGGCAAACATAGG+GGG - chr3.1:60871986-60872005 None:intergenic 40.0%
!! TTCAGGAGGTGTTACAACAA+TGG + chr3.1:60874157-60874176 MS.gene52365:intron 40.0%
!!! ACTTCCCAGATAATGGGTTT+TGG + chr3.1:60874005-60874024 MS.gene52365:intron 40.0%
!!! ATTCTTCTTGGTTTTGGGGT+CGG + chr3.1:60874446-60874465 MS.gene52365:CDS 40.0%
!!! GCATCTAGTGGACTCATTTT+TGG + chr3.1:60871712-60871731 MS.gene52365:CDS 40.0%
!!! TATGGGGCAAACATTGGTTT+TGG + chr3.1:60876054-60876073 MS.gene52365:CDS 40.0%
!!! TTTTGGCGGAGGTTTGTTAA+AGG + chr3.1:60876071-60876090 MS.gene52365:CDS 40.0%
AAGGTTGAAAATGGCAGGTG+GGG + chr3.1:60871612-60871631 MS.gene52365:intron 45.0%
ACAAGGTTGAAAATGGCAGG+TGG + chr3.1:60871610-60871629 MS.gene52365:intron 45.0%
AGCAAAGTCACTGCAGCTAT+CGG + chr3.1:60874326-60874345 MS.gene52365:CDS 45.0%
AGGACAAGGTTGAAAATGGC+AGG + chr3.1:60871607-60871626 MS.gene52365:intron 45.0%
ATCCACATCACTTATGTGGG+GGG + chr3.1:60872114-60872133 MS.gene52365:intron 45.0%
ATCCACATCACTTATGTGGG+GGG - chr3.1:60872133-60872114 None:intergenic 45.0%
ATTCTTCTTAGGAGTTGGCG+TGG + chr3.1:60874888-60874907 MS.gene52365:CDS 45.0%
CAAAACCGCCCCTTATGTTT+CGG + chr3.1:60872034-60872053 MS.gene52365:intron 45.0%
CAAAACCGCCCCTTATGTTT+CGG - chr3.1:60872053-60872034 None:intergenic 45.0%
CAAGGTTGAAAATGGCAGGT+GGG + chr3.1:60871611-60871630 MS.gene52365:intron 45.0%
CAGGTCAAAATTGACCATGG+GGG + chr3.1:60873783-60873802 MS.gene52365:intron 45.0%
CAGGTCAAAATTGACCATGG+GGG - chr3.1:60873802-60873783 None:intergenic 45.0%
CATCCACATCACTTATGTGG+GGG + chr3.1:60872113-60872132 MS.gene52365:intron 45.0%
CATCCACATCACTTATGTGG+GGG - chr3.1:60872132-60872113 None:intergenic 45.0%
CCACAGGTATAACGACTAGA+CGG - chr3.1:60875620-60875639 None:intergenic 45.0%
CCAGGTCAAAATTGACCATG+GGG + chr3.1:60873782-60873801 MS.gene52365:intron 45.0%
CCAGGTCAAAATTGACCATG+GGG - chr3.1:60873801-60873782 None:intergenic 45.0%
CCCACAGATTGAAAGAGGTT+TGG - chr3.1:60875285-60875304 None:intergenic 45.0%
CGCAACTTTGGCAAACATAG+GGG + chr3.1:60872144-60872163 MS.gene52365:intron 45.0%
GACCAGGTCAAAATTGACCA+TGG + chr3.1:60873780-60873799 MS.gene52365:intron 45.0%
GACCAGGTCAAAATTGACCA+TGG - chr3.1:60873799-60873780 None:intergenic 45.0%
GAGATTGGAAGAGCAACTTG+AGG + chr3.1:60872777-60872796 MS.gene52365:intron 45.0%
GATCTACTGGTCAGTGACTT+TGG - chr3.1:60871901-60871920 None:intergenic 45.0%
GCAACTTTGGCAAACATAGG+GGG + chr3.1:60872145-60872164 MS.gene52365:intron 45.0%
GCATCCACATCACTTATGTG+GGG + chr3.1:60872112-60872131 MS.gene52365:intron 45.0%
GCATCCACATCACTTATGTG+GGG - chr3.1:60872131-60872112 None:intergenic 45.0%
GCTTTGACGACTGGTATTCA+TGG + chr3.1:60875702-60875721 MS.gene52365:CDS 45.0%
GGCATCCACATCACTTATGT+GGG + chr3.1:60872111-60872130 MS.gene52365:intron 45.0%
GGCATCCACATCACTTATGT+GGG - chr3.1:60872130-60872111 None:intergenic 45.0%
GTTGACGAGTCCGAGAATAA+CGG - chr3.1:60875337-60875356 None:intergenic 45.0%
TGGAAAGCAGATACACAGAG+AGG + chr3.1:60871587-60871606 MS.gene52365:intron 45.0%
TGGCATCCACATCACTTATG+TGG + chr3.1:60872110-60872129 MS.gene52365:intron 45.0%
TGGCATCCACATCACTTATG+TGG - chr3.1:60872129-60872110 None:intergenic 45.0%
TTGGAATTAGCCAGGTGAGT+GGG - chr3.1:60875812-60875831 None:intergenic 45.0%
! GAGGGCCTTAATCGCAATTT+TGG - chr3.1:60871999-60872018 None:intergenic 45.0%
! GATTTTCTGCAATGCTGTCC+TGG - chr3.1:60875073-60875092 None:intergenic 45.0%
!! CTTGCTGGTGCTGCTATTAA+TGG + chr3.1:60874386-60874405 MS.gene52365:CDS 45.0%
!! GAAGGCACCAATTGTCATCA+CGG - chr3.1:60874998-60875017 None:intergenic 45.0%
!! GCTGACGCTTTGAAAGATTG+CGG + chr3.1:60875665-60875684 MS.gene52365:intron 45.0%
!! TGTTTCTATGCCGCAGGTTT+TGG + chr3.1:60875774-60875793 MS.gene52365:intron 45.0%
!! TTTGAAAAAATTAAAAAAAA+CGG + chr3.1:60872383-60872402 MS.gene52365:intron 5.0%
!!! TGAAAAAATTTTAAAAAAAT+TGG + chr3.1:60872297-60872316 MS.gene52365:intron 5.0%
!!! TTTAGTTTAATTAAAAATTT+AGG - chr3.1:60872920-60872939 None:intergenic 5.0%
!!! TTTTAAAAATAACAAAAAAT+CGG + chr3.1:60872584-60872603 MS.gene52365:intron 5.0%
AGCAGCACCAGCAAGAAAGA+TGG - chr3.1:60874381-60874400 None:intergenic 50.0%
AGGTTGAAAATGGCAGGTGG+GGG + chr3.1:60871613-60871632 MS.gene52365:intron 50.0%
ATCCTCCATCGATGTTGAGC+CGG + chr3.1:60875098-60875117 MS.gene52365:CDS 50.0%
ATTGCTCCACCAAAATGGCG+AGG + chr3.1:60874844-60874863 MS.gene52365:CDS 50.0%
CCAAGACCAACCAAAACCTG+CGG - chr3.1:60875787-60875806 None:intergenic 50.0%
CCGTCTAGTCGTTATACCTG+TGG + chr3.1:60875617-60875636 MS.gene52365:intron 50.0%
CGAAACCGAAACATAAGGGG+CGG + chr3.1:60873818-60873837 MS.gene52365:intron 50.0%
CGAAACCGAAACATAAGGGG+CGG - chr3.1:60873837-60873818 None:intergenic 50.0%
CTTGGAATTAGCCAGGTGAG+TGG - chr3.1:60875813-60875832 None:intergenic 50.0%
GATGGCACCACCCAACATTA+TGG - chr3.1:60874363-60874382 None:intergenic 50.0%
GCAGATACACAGAGAGGACA+AGG + chr3.1:60871593-60871612 MS.gene52365:intron 50.0%
GCCATTGATGCACCTTCGAA+TGG + chr3.1:60871640-60871659 MS.gene52365:CDS 50.0%
GGGCAACGCAACATTGGTAT+TGG + chr3.1:60875743-60875762 MS.gene52365:CDS 50.0%
GTCAAAGGGCAACGCAACAT+TGG + chr3.1:60875737-60875756 MS.gene52365:CDS 50.0%
TAACTCCGGCTCAACATCGA+TGG - chr3.1:60875106-60875125 None:intergenic 50.0%
TTTCCGTCGAAGCCATTCGA+AGG - chr3.1:60871655-60871674 None:intergenic 50.0%
! GCCATTCGAAGGTGCATCAA+TGG - chr3.1:60871644-60871663 None:intergenic 50.0%
!! AAAGCACCTCGCCATTTTGG+TGG - chr3.1:60874853-60874872 None:intergenic 50.0%
!! ACTCTCTCTTGGACTAGCAG+TGG + chr3.1:60874963-60874982 MS.gene52365:CDS 50.0%
!! CCCCATGGTCAATTTTGACC+TGG + chr3.1:60872075-60872094 MS.gene52365:intron 50.0%
!! CCCCATGGTCAATTTTGACC+TGG - chr3.1:60872094-60872075 None:intergenic 50.0%
!! GCTGGTGCTGCTATTAATGG+AGG + chr3.1:60874389-60874408 MS.gene52365:CDS 50.0%
!! GCTTTGCTAGCTTTGACGAC+TGG + chr3.1:60875693-60875712 MS.gene52365:CDS 50.0%
!! TCTATGCCGCAGGTTTTGGT+TGG + chr3.1:60875778-60875797 MS.gene52365:intron 50.0%
!!! CGCAGGTTTTGGTTGGTCTT+GGG + chr3.1:60875785-60875804 MS.gene52365:intron 50.0%
!!! CTGAAAGCACCTCGCCATTT+TGG - chr3.1:60874856-60874875 None:intergenic 50.0%
!!! GCAAACATTGGTTTTGGCGG+AGG + chr3.1:60876060-60876079 MS.gene52365:CDS 50.0%
!!! GCAGGTTTTGGTTGGTCTTG+GGG + chr3.1:60875786-60875805 MS.gene52365:intron 50.0%
!!! GGGGCAAACATTGGTTTTGG+CGG + chr3.1:60876057-60876076 MS.gene52365:CDS 50.0%
AACCAAGCTGCTGGGTGTGT+CGG - chr3.1:60875028-60875047 None:intergenic 55.0%
ATGCCATGTCAGCGTAGACC+AGG + chr3.1:60873764-60873783 MS.gene52365:intron 55.0%
ATGTGGATGCCATGTCAGCG+TGG - chr3.1:60873777-60873758 None:intergenic 55.0%
CCAATTGTCATCACGGCTGC+AGG - chr3.1:60874991-60875010 None:intergenic 55.0%
CCACGTTCAACCAAGCTGCT+GGG - chr3.1:60875036-60875055 None:intergenic 55.0%
CCTGCAGCCGTGATGACAAT+TGG + chr3.1:60874988-60875007 MS.gene52365:CDS 55.0%
GCACCTTCGAATGGCTTCGA+CGG + chr3.1:60871649-60871668 MS.gene52365:CDS 55.0%
GGGGGCCAAAATCGCAACTT+TGG + chr3.1:60872132-60872151 MS.gene52365:intron 55.0%
GGGTGTGTCGGATATGAGGA+AGG - chr3.1:60875016-60875035 None:intergenic 55.0%
GGTTGAAAATGGCAGGTGGG+GGG + chr3.1:60871614-60871633 MS.gene52365:intron 55.0%
GTGGCAAGATAGACCAAGCC+AGG + chr3.1:60875052-60875071 MS.gene52365:CDS 55.0%
TCTGCAATGCTGTCCTGGCT+TGG - chr3.1:60875068-60875087 None:intergenic 55.0%
TGACCTGGTCTACGCTGACA+TGG - chr3.1:60873770-60873789 None:intergenic 55.0%
TGCTGGGTGTGTCGGATATG+AGG - chr3.1:60875020-60875039 None:intergenic 55.0%
!! GGTGGTGCCATCTTTCTTGC+TGG + chr3.1:60874371-60874390 MS.gene52365:CDS 55.0%
!!! CCGCAGGTTTTGGTTGGTCT+TGG + chr3.1:60875784-60875803 MS.gene52365:intron 55.0%
ATCCGACACACCCAGCAGCT+TGG + chr3.1:60875023-60875042 MS.gene52365:CDS 60.0%
ATGCCATGTCAGCGTGGACC+AGG - chr3.1:60872096-60872115 None:intergenic 60.0%
CCCAGCAGCTTGGTTGAACG+TGG + chr3.1:60875033-60875052 MS.gene52365:CDS 60.0%
CTCCGGCTCAACATCGATGG+AGG - chr3.1:60875103-60875122 None:intergenic 60.0%
GCCACGTTCAACCAAGCTGC+TGG - chr3.1:60875037-60875056 None:intergenic 60.0%
GGCCCCCCACATAAGTGATG+TGG + chr3.1:60873741-60873760 MS.gene52365:intron 60.0%
GGCCCCCCACATAAGTGATG+TGG - chr3.1:60873760-60873741 None:intergenic 60.0%
TGACCTGGTCCACGCTGACA+TGG + chr3.1:60872090-60872109 MS.gene52365:intron 60.0%
! CGTTGCACTTTTGGCCCCCA+TGG + chr3.1:60872060-60872079 MS.gene52365:intron 60.0%
! CGTTGCACTTTTGGCCCCCA+TGG - chr3.1:60872079-60872060 None:intergenic 60.0%
! TGGCGAGGTGCTTTCAGCAC+CGG + chr3.1:60874859-60874878 MS.gene52365:CDS 60.0%
ACGCGACCGCCAAGCACACA+TGG + chr3.1:60874932-60874951 MS.gene52365:CDS 65.0%
CCAGCCCCATGTGTGCTTGG+CGG - chr3.1:60874941-60874960 None:intergenic 65.0%
CGCGACCGCCAAGCACACAT+GGG + chr3.1:60874933-60874952 MS.gene52365:CDS 65.0%
GCGACCGCCAAGCACACATG+GGG + chr3.1:60874934-60874953 MS.gene52365:CDS 65.0%
GGAGTTGGCGTGGTTGCTGC+AGG + chr3.1:60874898-60874917 MS.gene52365:CDS 65.0%
TCGCCAGCCCCATGTGTGCT+TGG - chr3.1:60874944-60874963 None:intergenic 65.0%
! TGGGGCTGGCGACTCTCTCT+TGG + chr3.1:60874952-60874971 MS.gene52365:CDS 65.0%
CCGCCAAGCACACATGGGGC+TGG + chr3.1:60874938-60874957 MS.gene52365:CDS 70.0%
GGTCTTGGGGCCCACTCACC+TGG + chr3.1:60875799-60875818 MS.gene52365:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 60871397 60876121 60871397 ID=MS.gene52365
chr3.1 mRNA 60871397 60876121 60871397 ID=MS.gene52365.t1;Parent=MS.gene52365
chr3.1 exon 60871397 60871406 60871397 ID=MS.gene52365.t1.exon1;Parent=MS.gene52365.t1
chr3.1 CDS 60871397 60871406 60871397 ID=cds.MS.gene52365.t1;Parent=MS.gene52365.t1
chr3.1 exon 60871629 60871754 60871629 ID=MS.gene52365.t1.exon2;Parent=MS.gene52365.t1
chr3.1 CDS 60871629 60871754 60871629 ID=cds.MS.gene52365.t1;Parent=MS.gene52365.t1
chr3.1 exon 60874162 60874481 60874162 ID=MS.gene52365.t1.exon3;Parent=MS.gene52365.t1
chr3.1 CDS 60874162 60874481 60874162 ID=cds.MS.gene52365.t1;Parent=MS.gene52365.t1
chr3.1 exon 60874820 60875449 60874820 ID=MS.gene52365.t1.exon4;Parent=MS.gene52365.t1
chr3.1 CDS 60874820 60875449 60874820 ID=cds.MS.gene52365.t1;Parent=MS.gene52365.t1
chr3.1 exon 60875681 60875789 60875681 ID=MS.gene52365.t1.exon5;Parent=MS.gene52365.t1
chr3.1 CDS 60875681 60875789 60875681 ID=cds.MS.gene52365.t1;Parent=MS.gene52365.t1
chr3.1 exon 60875985 60876121 60875985 ID=MS.gene52365.t1.exon6;Parent=MS.gene52365.t1
chr3.1 CDS 60875985 60876121 60875985 ID=cds.MS.gene52365.t1;Parent=MS.gene52365.t1
Gene Sequence

>MS.gene52365

ATGTTGCCATGTATGTCAACATCAAGCGAGGACAATGACATTTTGTTTTGTTTTCAAAAAATGTGTTTGCATTGTTAGTTAGAGTGTTGGAATTTGGATTATGTAGTTATAATTTTTCAGCATCACTAACTTTTTTTCCTCTTAGCTTTATCTATACTCCTAGGTAGTAAGAAGAGCTACTATTACTAATTGGAAAGCAGATACACAGAGAGGACAAGGTTGAAAATGGCAGGTGGGGGGTTTGCCATTGATGCACCTTCGAATGGCTTCGACGGAAAGATAACACTCTCAGTTATCATTACTTGTATTGTTGCTGCATCTAGTGGACTCATTTTTGGATATGACATTGGGATTTCAGGTTTTCTTCCTTTTTGTTTTTTCATTATAAAGTATCCAATTAGAGCATGTTTTTTGCTTTTTAAAGCATCTTGTATTCTGCTACATCAATCTTTGCCCAAAATGAAAGAAAATGTTTTAAACAATGTTTCAAATATCGACTTGCCAAAGTCACTGACCAGTAGATCACTAGTTGAATCGCATGATTTGTACTACTAATAGTTTTCAATTGGCTTAATAGCACTTTTGGCCCCCTATGTTTGCCAAAATTGCGATTAAGGCCCTCTATCTTTGAAAACTACAAAACCGCCCCTTATGTTTCGGTTTCGTTGCACTTTTGGCCCCCATGGTCAATTTTGACCTGGTCCACGCTGACATGGCATCCACATCACTTATGTGGGGGGCCAAAATCGCAACTTTGGCAAACATAGGGGGCCAAAAGTGCTATTAAGAATATTTTTTTATTTTTTAATTCATTTTCTCCTTTTTTTTCATTTTTTTGTTTTGAAAAAATTTAAAAAAAGAGGGAAAATTAATAAAAATCGAAAATAATGAAAAAAATACTGAAAAAATTTTAAAAAAATTGGAAAAATTAATAAGAATAAAAAAAAATCTGTAAAAAAAATTTCGCATTTTTTTCATTTTTTTGTTTTGAAAAAATTAAAAAAAACGGGGAAAATTAATAAAAATCGAAAATAATGTAAAAAATACTGAAAAAATTTAAAAAAATTGGAAAAATTAATAAGAATGAAAACAAAAATCTGGAAAAAAAATTTCGCATCACATGTGTGTATATACATACCACATCATTAAATCATTTTAATAATAAAAAACATTAAAAACTGAAAATCTTTTAAAAATAACAAAAAATCGGATTATCTTTTTAAAAAATAAAAGTTTAGATTTTTTTGAGAAATAAAAAACTGGAAAATATTTAAAATTTTAAAAATCTAGATATATATTTTTTAAAATCCAATTACAATATGAAAATTAAATTTTAAAAATCATATAATCTGAAGAAAAAAAATCAATTTTAGTTCAAAAGAGATTGGAAGAGCAACTTGAGGTACTCACTTTTTAAATTTTAATGTCTCCTAAATAAGACACTTTTTAAAATTTTACACGCATTAATAATTCTTTTTACAAAAATATTCCTATGTAATTCAAGCTTCACAGATTTGTTTCCTAAATTTTTAATTAAACTAAAATCAATTTTTTTCTTCAGATTATATGATTTTTAAAATTTAATTTTTCTATTGTAATTGGATTTTAAAAAAAATATATATCCAGATTTCCAGTTTTTTATTTTGCAAAAAAATCTAAACTTTTTTTAATTTGAAAATTAAATTCCAGTATTTTTAAATATCTTCTAAATTTTGTAAAAAATCCGAACTTTTTTCTAATTTTTTAAATTTCGAAAAAAATCTAAATGTCTTTTTCTGCTTTTTTCTTTTATTTTTCGAAAAAAATAATCTGATTTTTTGTTATTTTTAAAATTTTAAAATAAATAAATCTTTTATTTTGTAAAAAGATAATCGGATTTTTTGTTATTTTTAAAAGATTTTCAGTTTTTAATGTTTTTTATTATTAAAATGATTTAATGAATTGGTATGTATATACACACATGTGATGCGAAATTTTTTTTCCAGATTTTTGTTTTCATTCTTATTAATTTTTTCAATTTTTTTTAAATTTTTTCAGTATTTTTTTCATTATTTTCGATTTTTATTAATTTTCCCTCTTTTTTTTTAATTTTTCAAAACAAAAAAATGAAAAAAATGCGAAATTTTTTTTCCAGATTTTTTTTTTCATTCTTATTAATTTTTTCCAAATTCTTTTAAATTTTTTCAGTAATTTTTTCATTATTTTCGATTTTTATTAATTTTCCCTCTTTTTTTAAATTTTTTCAAAACAAAAAAATGAAAAAAAAGGAGAAAATGAATTAAAAAAATAAAAAATATTCTTAATAGCACTTTTGGCCCCCTATGTTTGCAAAAGTTGCGATTTTGGCCCCCCACATAAGTGATGTGGATGCCATGTCAGCGTAGACCAGGTCAAAATTGACCATGGGGGCCAAAAGTGCAACGAAACCGAAACATAAGGGGCGGTTTTGTAGTTTTCAAAGATAGGGGGCCGAAATCGCAATTTTGACAAACATAGGGGGCCAAAAGTGCTATTAAGCCTTTTCAATTTGAATGATTTGATCATATAACTCAAGAATTAAATTGGACTCAACAAGGTGTCTGTTTCTGTAGAAAATTCTAAAAAAAAAACTTCCCAGATAATGGGTTTTGGACAAAGTCTAATAATTGCATTTTAATCATGATGCTATACATTATTTTTACATTTTATCTTCAAAATTTACTTGGAGAAGAACCAAAGTCATAAAGCTCACCCTTTTTACTAATGAAAAATGTTATCAAATTCAGGAGGTGTTACAACAATGGTGCCATTTCTCAATAAATTCTTCCCAGATATTCTAAGAAAGGCTGCTGGTACTGAAGTAAACATGTACTGTGTGTATGACAGTCAAATGTTGACATTGTTTACGTCTTCTCTGTATCTAGCTGCGTTAGTGTCAACTCTTGTAGCTAGCAAAGTCACTGCAGCTATCGGTCGAAAAAACACCATAATGTTGGGTGGTGCCATCTTTCTTGCTGGTGCTGCTATTAATGGAGGTTCTGAAAATATTGTTATGCTCATCCTTGGTCGTATTCTTCTTGGTTTTGGGGTCGGTTTCACTAGTCAAGTAAGTGAACATATACAATTATACACATTTGTTAATAGTAACATCGTCAACAATATAAAATTTTCTATTATACACAAGCAATGAGACCATTTCCCTCTTTTTTAATTTAACTTTTAGCCACAATTTTAAATAGCAATGTTGCCGCGATTCTTGTTCTTACAGAGAATTGTGATCAAATATAGTTGTATCTTGGTCGCAGGGACATAAAAATCATAATGTTGTGGTCCAAATTTTGATAGCATCCTTTATTTAAAATATTGCTACTAACTTTTAACTTAATAAACCATGTTTAAAATAAATTTGCTTGCTAATTGTATTACATGATGCAATTGGAAAAGGCGACTCCACTATACCTTTCTGAAATTGCTCCACCAAAATGGCGAGGTGCTTTCAGCACCGGCTTTCAATTCTTCTTAGGAGTTGGCGTGGTTGCTGCAGGTTGCATAAATTACGCGACCGCCAAGCACACATGGGGCTGGCGACTCTCTCTTGGACTAGCAGTGGTGCCTGCAGCCGTGATGACAATTGGTGCCTTCCTCATATCCGACACACCCAGCAGCTTGGTTGAACGTGGCAAGATAGACCAAGCCAGGACAGCATTGCAGAAAATCAGAGGATCCTCCATCGATGTTGAGCCGGAGTTAGAAGAACTCATTAAGTGGACAGAAGTTTCGAAATCAGTGCAAGAAGAGCCATTTATGGCCATATTTGAGAGACAATATCGACCTCACTTAATCATGGCATTTGCAATCCCGTTTTTTCAACAGTTTACAGGGATCAACATCGTCGCTTTCTATTCACCAAACCTCTTTCAATCTGTGGGTTTAGGAAACAACGGTGCTTTACTTTCTGCCGTTATTCTCGGACTCGTCAACCTTGCTTCTATCCTAGTCTCAACTGCTTTTGTTGATCGGTTTGGTCGAAGATTCTTGTTCATTACGGGTGGCATTCTAATGCTTGTCTGTCTGGTAAGAAAATTAAGCAACCATATGTGTATAATATTATTTATATTTATTTATTTATTGTTCTAGTATTTTCATATTCAACTATTAAAAAAAATGAAATTATAACGACAGAAAGATTGCAGTATTAATGCTTTTTCCGTCTCTAAATTTTCGTCCTTATTTTAATTTCTCCGTCTAGTCGTTATACCTGTGGTTTGGTACTAATAGTTATAATTTGTGCTGACGCTTTGAAAGATTGCGGTGTCTGCTTTGCTAGCTTTGACGACTGGTATTCATGGTACAAAGGACATGTCAAAGGGCAACGCAACATTGGTATTGGTTTTACTATGTTTCTATGCCGCAGGTTTTGGTTGGTCTTGGGGCCCACTCACCTGGCTAATTCCAAGTGAAATTTTCCCCTTAAAAATCAGAACAACTGGACAAAGTATAGCAGTTGGTGTACAATTTATAATCGTGTTTGTGTTATCACAAACATTCTTGACAATGCTATGCCACTTCAAGTTTGGTGCTTTCTTGTTCTATGCATTTTGGGTTGCAGTGATGACTCTATTTATTATTTTCTTTTTACCTGAGACCAAAGGAATTGCTTTGGAGTCAATGTACATTATATGGGGCAAACATTGGTTTTGGCGGAGGTTTGTTAAAGGAGAAGTTGAGAAGGACAATCTTCCATGA
Protein sequence

>MS.gene52365.t1

MLPCGGFAIDAPSNGFDGKITLSVIITCIVAASSGLIFGYDIGISGGVTTMVPFLNKFFPDILRKAAGTEVNMYCVYDSQMLTLFTSSLYLAALVSTLVASKVTAAIGRKNTIMLGGAIFLAGAAINGGSENIVMLILGRILLGFGVGFTSQATPLYLSEIAPPKWRGAFSTGFQFFLGVGVVAAGCINYATAKHTWGWRLSLGLAVVPAAVMTIGAFLISDTPSSLVERGKIDQARTALQKIRGSSIDVEPELEELIKWTEVSKSVQEEPFMAIFERQYRPHLIMAFAIPFFQQFTGINIVAFYSPNLFQSVGLGNNGALLSAVILGLVNLASILVSTAFVDRFGRRFLFITGGILMLVCLIAVSALLALTTGIHGTKDMSKGNATLVLVLLCFYAAVMTLFIIFFLPETKGIALESMYIIWGKHWFWRRFVKGEVEKDNLP