Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52849.t1 | XP_013468662.1 | 99 | 580 | 5 | 1 | 1 | 580 | 1 | 579 | 0.00E+00 | 1127.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52849.t1 | A0A072VL03 | 99.0 | 580 | 5 | 1 | 1 | 580 | 1 | 579 | 0.0e+00 | 1127.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene52849 | 0.810427 | 1.16E-50 | -1.69E-46 |
| MS.gene04919 | MS.gene52849 | 0.80101 | 1.10E-48 | -1.69E-46 |
| MS.gene04920 | MS.gene52849 | 0.820218 | 7.70E-53 | -1.69E-46 |
| MS.gene049254 | MS.gene52849 | 0.802529 | 5.37E-49 | -1.69E-46 |
| MS.gene049283 | MS.gene52849 | 0.821478 | 3.95E-53 | -1.69E-46 |
| MS.gene049350 | MS.gene52849 | 0.806707 | 7.22E-50 | -1.69E-46 |
| MS.gene049680 | MS.gene52849 | 0.806502 | 7.97E-50 | -1.69E-46 |
| MS.gene049711 | MS.gene52849 | 0.813156 | 2.95E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene52849 | 0.835665 | 1.47E-56 | -1.69E-46 |
| MS.gene050945 | MS.gene52849 | 0.816698 | 4.84E-52 | -1.69E-46 |
| MS.gene051019 | MS.gene52849 | 0.821153 | 4.70E-53 | -1.69E-46 |
| MS.gene051201 | MS.gene52849 | 0.805424 | 1.34E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene52849 | 0.801538 | 8.59E-49 | -1.69E-46 |
| MS.gene051538 | MS.gene52849 | 0.802863 | 4.59E-49 | -1.69E-46 |
| MS.gene051637 | MS.gene52849 | 0.802483 | 5.49E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene52849 | 0.816867 | 4.43E-52 | -1.69E-46 |
| MS.gene052118 | MS.gene52849 | 0.80476 | 1.85E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene52849 | 0.800337 | 1.51E-48 | -1.69E-46 |
| MS.gene052533 | MS.gene52849 | 0.834592 | 2.74E-56 | -1.69E-46 |
| MS.gene052717 | MS.gene52849 | 0.805332 | 1.41E-49 | -1.69E-46 |
| MS.gene052793 | MS.gene52849 | 0.813883 | 2.04E-51 | -1.69E-46 |
| MS.gene053272 | MS.gene52849 | -0.816733 | 4.75E-52 | -1.69E-46 |
| MS.gene054142 | MS.gene52849 | 0.84307 | 1.76E-58 | -1.69E-46 |
| MS.gene054178 | MS.gene52849 | 0.820927 | 5.29E-53 | -1.69E-46 |
| MS.gene055229 | MS.gene52849 | 0.818387 | 2.01E-52 | -1.69E-46 |
| MS.gene055506 | MS.gene52849 | 0.821444 | 4.02E-53 | -1.69E-46 |
| MS.gene055513 | MS.gene52849 | 0.821644 | 3.62E-53 | -1.69E-46 |
| MS.gene056082 | MS.gene52849 | 0.800193 | 1.62E-48 | -1.69E-46 |
| MS.gene056699 | MS.gene52849 | 0.815879 | 7.37E-52 | -1.69E-46 |
| MS.gene05686 | MS.gene52849 | 0.810993 | 8.74E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene52849 | 0.870801 | 1.11E-66 | -1.69E-46 |
| MS.gene057684 | MS.gene52849 | -0.817972 | 2.50E-52 | -1.69E-46 |
| MS.gene058279 | MS.gene52849 | 0.801386 | 9.23E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene52849 | 0.804138 | 2.49E-49 | -1.69E-46 |
| MS.gene059778 | MS.gene52849 | 0.845418 | 4.11E-59 | -1.69E-46 |
| MS.gene05985 | MS.gene52849 | -0.885833 | 5.78E-72 | -1.69E-46 |
| MS.gene059901 | MS.gene52849 | -0.81541 | 9.38E-52 | -1.69E-46 |
| MS.gene060338 | MS.gene52849 | 0.823878 | 1.09E-53 | -1.69E-46 |
| MS.gene060512 | MS.gene52849 | 0.816651 | 4.95E-52 | -1.69E-46 |
| MS.gene060522 | MS.gene52849 | 0.811939 | 5.45E-51 | -1.69E-46 |
| MS.gene060525 | MS.gene52849 | 0.815227 | 1.03E-51 | -1.69E-46 |
| MS.gene060935 | MS.gene52849 | 0.814683 | 1.36E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene52849 | 0.826481 | 2.65E-54 | -1.69E-46 |
| MS.gene061100 | MS.gene52849 | 0.855423 | 6.37E-62 | -1.69E-46 |
| MS.gene061188 | MS.gene52849 | 0.829681 | 4.49E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52849.t1 | MTR_1g073890 | 98.966 | 580 | 5 | 1 | 1 | 580 | 1 | 579 | 0.0 | 1176 |
| MS.gene52849.t1 | MTR_1g044135 | 69.156 | 616 | 147 | 9 | 1 | 580 | 1 | 609 | 0.0 | 832 |
| MS.gene52849.t1 | MTR_6g461910 | 36.594 | 552 | 293 | 14 | 18 | 563 | 10 | 510 | 2.17e-90 | 288 |
| MS.gene52849.t1 | MTR_1g061540 | 35.075 | 536 | 302 | 12 | 29 | 549 | 17 | 521 | 2.78e-76 | 251 |
| MS.gene52849.t1 | MTR_7g103490 | 33.146 | 534 | 305 | 10 | 46 | 551 | 29 | 538 | 1.47e-72 | 243 |
| MS.gene52849.t1 | MTR_3g091180 | 56.571 | 175 | 62 | 3 | 391 | 560 | 415 | 580 | 6.81e-57 | 201 |
| MS.gene52849.t1 | MTR_3g091180 | 36.047 | 258 | 142 | 5 | 1 | 256 | 1 | 237 | 9.49e-40 | 153 |
| MS.gene52849.t1 | MTR_1g092540 | 57.692 | 156 | 66 | 0 | 399 | 554 | 423 | 578 | 1.05e-53 | 192 |
| MS.gene52849.t1 | MTR_1g092540 | 38.426 | 216 | 130 | 2 | 36 | 248 | 14 | 229 | 9.93e-42 | 159 |
| MS.gene52849.t1 | MTR_0318s0020 | 59.064 | 171 | 63 | 4 | 395 | 563 | 402 | 567 | 4.21e-53 | 191 |
| MS.gene52849.t1 | MTR_0318s0020 | 34.661 | 251 | 144 | 3 | 18 | 248 | 100 | 350 | 8.05e-34 | 136 |
| MS.gene52849.t1 | MTR_7g063040 | 42.396 | 217 | 119 | 2 | 38 | 248 | 17 | 233 | 2.23e-46 | 170 |
| MS.gene52849.t1 | MTR_7g063040 | 35.484 | 155 | 90 | 2 | 406 | 552 | 331 | 483 | 9.68e-25 | 108 |
| MS.gene52849.t1 | MTR_4g021260 | 43.458 | 214 | 112 | 2 | 44 | 248 | 17 | 230 | 5.23e-46 | 169 |
| MS.gene52849.t1 | MTR_4g021260 | 41.096 | 146 | 81 | 3 | 406 | 546 | 330 | 475 | 5.32e-29 | 120 |
| MS.gene52849.t1 | MTR_1g096970 | 33.488 | 215 | 134 | 3 | 46 | 254 | 51 | 262 | 3.93e-23 | 103 |
| MS.gene52849.t1 | MTR_1g096970 | 30.247 | 162 | 99 | 2 | 395 | 546 | 255 | 412 | 1.17e-14 | 77.4 |
| MS.gene52849.t1 | MTR_1g025340 | 29.796 | 245 | 152 | 6 | 46 | 281 | 127 | 360 | 4.73e-20 | 94.4 |
| MS.gene52849.t1 | MTR_1g025340 | 33.117 | 154 | 84 | 4 | 408 | 548 | 345 | 492 | 1.25e-13 | 74.3 |
| MS.gene52849.t1 | MTR_3g097240 | 30.734 | 218 | 146 | 4 | 46 | 261 | 141 | 355 | 6.98e-19 | 90.1 |
| MS.gene52849.t1 | MTR_3g097240 | 30.734 | 218 | 146 | 4 | 46 | 261 | 141 | 355 | 7.65e-19 | 89.7 |
| MS.gene52849.t1 | MTR_3g097240 | 30.734 | 218 | 146 | 4 | 46 | 261 | 141 | 355 | 1.61e-18 | 89.7 |
| MS.gene52849.t1 | MTR_3g097240 | 31.618 | 136 | 76 | 4 | 411 | 535 | 359 | 488 | 8.54e-11 | 65.1 |
| MS.gene52849.t1 | MTR_3g114010 | 30.660 | 212 | 134 | 4 | 46 | 249 | 122 | 328 | 7.20e-18 | 87.8 |
| MS.gene52849.t1 | MTR_3g114010 | 32.911 | 158 | 91 | 3 | 408 | 554 | 340 | 493 | 3.28e-15 | 79.3 |
| MS.gene52849.t1 | MTR_8g095080 | 30.233 | 215 | 141 | 3 | 46 | 254 | 150 | 361 | 2.56e-14 | 75.9 |
| MS.gene52849.t1 | MTR_8g095080 | 30.233 | 215 | 141 | 3 | 46 | 254 | 150 | 361 | 3.22e-14 | 76.3 |
| MS.gene52849.t1 | MTR_8g095080 | 29.412 | 136 | 79 | 4 | 411 | 535 | 373 | 502 | 3.98e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene52849.t1 | AT3G23160 | 56.336 | 584 | 198 | 11 | 1 | 580 | 1 | 531 | 0.0 | 623 |
| MS.gene52849.t1 | AT5G04550 | 56.548 | 168 | 68 | 2 | 406 | 568 | 428 | 595 | 2.14e-56 | 200 |
| MS.gene52849.t1 | AT5G04550 | 36.406 | 217 | 137 | 1 | 35 | 250 | 14 | 230 | 3.89e-40 | 154 |
| MS.gene52849.t1 | AT5G04550 | 56.548 | 168 | 68 | 2 | 406 | 568 | 428 | 595 | 2.14e-56 | 200 |
| MS.gene52849.t1 | AT5G04550 | 36.406 | 217 | 137 | 1 | 35 | 250 | 14 | 230 | 3.89e-40 | 154 |
| MS.gene52849.t1 | AT5G51670 | 53.988 | 163 | 65 | 3 | 407 | 565 | 311 | 467 | 2.43e-48 | 175 |
| MS.gene52849.t1 | AT5G51670 | 29.658 | 263 | 163 | 2 | 1 | 250 | 1 | 254 | 8.06e-29 | 120 |
| MS.gene52849.t1 | AT5G51670 | 53.988 | 163 | 65 | 3 | 407 | 565 | 311 | 467 | 2.43e-48 | 175 |
| MS.gene52849.t1 | AT5G51670 | 29.658 | 263 | 163 | 2 | 1 | 250 | 1 | 254 | 8.06e-29 | 120 |
| MS.gene52849.t1 | AT1G34320 | 30.672 | 238 | 148 | 4 | 46 | 275 | 155 | 383 | 4.31e-22 | 101 |
| MS.gene52849.t1 | AT1G34320 | 30.719 | 153 | 88 | 4 | 407 | 546 | 373 | 520 | 1.04e-12 | 71.2 |
| MS.gene52849.t1 | AT1G34320 | 30.672 | 238 | 148 | 4 | 46 | 275 | 155 | 383 | 4.31e-22 | 101 |
| MS.gene52849.t1 | AT1G34320 | 30.719 | 153 | 88 | 4 | 407 | 546 | 373 | 520 | 1.04e-12 | 71.2 |
| MS.gene52849.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 3.81e-15 | 78.6 |
| MS.gene52849.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 4.33e-15 | 78.2 |
| MS.gene52849.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 4.33e-15 | 78.2 |
| MS.gene52849.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 4.52e-15 | 79.0 |
| MS.gene52849.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 4.52e-15 | 79.0 |
| MS.gene52849.t1 | AT1G30755 | 27.315 | 216 | 148 | 2 | 46 | 255 | 134 | 346 | 4.52e-15 | 79.0 |
| MS.gene52849.t1 | AT5G08660 | 32.547 | 212 | 128 | 4 | 46 | 248 | 149 | 354 | 2.75e-12 | 69.7 |
| MS.gene52849.t1 | AT5G08660 | 32.547 | 212 | 128 | 4 | 46 | 248 | 149 | 354 | 2.96e-12 | 70.1 |
| MS.gene52849.t1 | AT5G08660 | 34.586 | 133 | 70 | 4 | 411 | 532 | 372 | 498 | 3.34e-12 | 69.7 |
| MS.gene52849.t1 | AT5G08660 | 32.547 | 212 | 128 | 4 | 46 | 248 | 149 | 354 | 2.96e-12 | 70.1 |
| MS.gene52849.t1 | AT5G08660 | 34.586 | 133 | 70 | 4 | 411 | 532 | 372 | 498 | 3.34e-12 | 69.7 |
| MS.gene52849.t1 | AT5G08660 | 32.547 | 212 | 128 | 4 | 46 | 248 | 149 | 354 | 2.96e-12 | 70.1 |
| MS.gene52849.t1 | AT5G08660 | 34.586 | 133 | 70 | 4 | 411 | 532 | 372 | 498 | 3.34e-12 | 69.7 |
Find 125 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGAGGGTGTTAGGAATT+TGG | 0.165683 | 1.4:-60605904 | MS.gene52849:CDS |
| TAGGAGTTTGTATAGTAAAA+TGG | 0.207230 | 1.4:-60605643 | MS.gene52849:CDS |
| TTTATAAAGTTGAATGGTTT+TGG | 0.228524 | 1.4:+60605974 | None:intergenic |
| GCTATATGTGAACTTCTTAA+AGG | 0.229546 | 1.4:-60604547 | MS.gene52849:CDS |
| CTTAGCTTTCCACATTTAAT+TGG | 0.238050 | 1.4:-60604856 | MS.gene52849:CDS |
| TAAGACATATGTCAAGAATT+TGG | 0.242976 | 1.4:-60604764 | MS.gene52849:CDS |
| ACAACAGCTAATCCACTATT+TGG | 0.258196 | 1.4:+60604958 | None:intergenic |
| GTGTTGCTGGTGTGGTTTCT+AGG | 0.267385 | 1.4:-60605818 | MS.gene52849:CDS |
| TGGAAATATTGTCAAGAAAA+AGG | 0.289545 | 1.4:-60605004 | MS.gene52849:CDS |
| TATGTTCAACTTGAAGATTT+TGG | 0.292464 | 1.4:-60605177 | MS.gene52849:CDS |
| TCAAGCTCTCAAAGTCCTAT+TGG | 0.302945 | 1.4:-60605030 | MS.gene52849:CDS |
| CTCTTCTACTCTCCCCATTC+TGG | 0.305632 | 1.4:+60605571 | None:intergenic |
| TATGCTCCTCCTTCTACTCT+TGG | 0.307855 | 1.4:-60604934 | MS.gene52849:CDS |
| CTTGACATATGTCTTAAGTT+TGG | 0.310915 | 1.4:+60604771 | None:intergenic |
| GTAGAAAACATGGTCCTAAA+AGG | 0.314812 | 1.4:-60606058 | MS.gene52849:CDS |
| GGTTACAATTTGAGTTCAAT+TGG | 0.318849 | 1.4:-60605255 | MS.gene52849:CDS |
| GCTGGTGTGGTTTCTAGGTT+AGG | 0.323657 | 1.4:-60605813 | MS.gene52849:CDS |
| ACAACAACAAAACGCATTAC+TGG | 0.333831 | 1.4:-60604500 | MS.gene52849:CDS |
| GGAAGGAATGGTGAGGAAAA+TGG | 0.336491 | 1.4:-60605685 | MS.gene52849:CDS |
| ATTTGGAAGATTGCATGAAA+TGG | 0.336800 | 1.4:-60604459 | MS.gene52849:CDS |
| AGGAGTTTGTATAGTAAAAT+GGG | 0.339974 | 1.4:-60605642 | MS.gene52849:CDS |
| TTGTGCAAGCAGTTTCAATT+TGG | 0.348203 | 1.4:-60604476 | MS.gene52849:CDS |
| TAGAAGAAGTTTCAAGCAAA+AGG | 0.354356 | 1.4:+60606084 | None:intergenic |
| GTTATAGATGTGAATGAATT+GGG | 0.361108 | 1.4:-60605726 | MS.gene52849:CDS |
| TAGCTTAAGGTTATCTTTGA+AGG | 0.361906 | 1.4:-60604794 | MS.gene52849:CDS |
| GTTTAATATTTGCACTTACT+TGG | 0.364850 | 1.4:+60606111 | None:intergenic |
| GTTACAATTTGAGTTCAATT+GGG | 0.373341 | 1.4:-60605254 | MS.gene52849:CDS |
| CATTCCATGAAAAGTCTTCC+AGG | 0.373626 | 1.4:+60605135 | None:intergenic |
| TGCAAGAGGGGCATCATATA+TGG | 0.376522 | 1.4:+60604741 | None:intergenic |
| TCTTGAACTCAGAGGGTGTT+AGG | 0.377364 | 1.4:-60605911 | MS.gene52849:CDS |
| TGTTATAGATGTGAATGAAT+TGG | 0.381186 | 1.4:-60605727 | MS.gene52849:CDS |
| CGCAGTCATAGCAAGAAAAC+TGG | 0.386237 | 1.4:-60605276 | MS.gene52849:CDS |
| GGTTTGAGCAGAGGCTTGTA+TGG | 0.386287 | 1.4:-60605548 | MS.gene52849:CDS |
| ACAATATTTCCAATCCCAAT+AGG | 0.393961 | 1.4:+60605015 | None:intergenic |
| AATAAGAAAGTAGAAACTAT+AGG | 0.400565 | 1.4:-60606029 | MS.gene52849:CDS |
| GCACATCCTCCAAGAGTAGA+AGG | 0.403510 | 1.4:+60604925 | None:intergenic |
| TGATAAGGTTGTTGAGTTGT+TGG | 0.404841 | 1.4:-60605472 | MS.gene52849:CDS |
| TCAACCTTTGGTCCAAATAG+TGG | 0.405123 | 1.4:-60604970 | MS.gene52849:CDS |
| AGATGTTGCCAACTAGCTTA+AGG | 0.410569 | 1.4:-60604807 | MS.gene52849:CDS |
| CAAGCTCTCAAAGTCCTATT+GGG | 0.410774 | 1.4:-60605029 | MS.gene52849:CDS |
| AAAGATAACCTTAAGCTAGT+TGG | 0.416185 | 1.4:+60604799 | None:intergenic |
| GAGGAATTGAACCGTGTTGC+TGG | 0.417423 | 1.4:-60605831 | MS.gene52849:CDS |
| TTCAGAATAATAGCCAGAAT+GGG | 0.425837 | 1.4:-60605584 | MS.gene52849:CDS |
| GACTGGAAGGCGACTCTTGA+CGG | 0.432150 | 1.4:-60604715 | MS.gene52849:CDS |
| ATGCCCCTCTTGCACATGAC+TGG | 0.436871 | 1.4:-60604732 | MS.gene52849:CDS |
| TTTCCTTGTGGAACAAGTCC+TGG | 0.437137 | 1.4:-60605153 | MS.gene52849:CDS |
| AATCTGAGATAGCAAAGTTA+AGG | 0.437201 | 1.4:-60605941 | MS.gene52849:CDS |
| TTGCTCATAATATGATGAAA+TGG | 0.441213 | 1.4:-60604669 | MS.gene52849:CDS |
| CAATGATTTATAAAGTTGAA+TGG | 0.441919 | 1.4:+60605968 | None:intergenic |
| GAGCACTTATGCTCAACCTT+TGG | 0.443046 | 1.4:-60604982 | MS.gene52849:CDS |
| TTTCAGAATAATAGCCAGAA+TGG | 0.444882 | 1.4:-60605585 | MS.gene52849:CDS |
| GCAAGATGTGAGGCAGCTTA+AGG | 0.445171 | 1.4:-60605520 | MS.gene52849:CDS |
| TGTTCTGTGCCTGCTTTGCA+AGG | 0.446637 | 1.4:-60605783 | MS.gene52849:CDS |
| GCTCCTCCTTCTACTCTTGG+AGG | 0.447412 | 1.4:-60604931 | MS.gene52849:CDS |
| AGAAGAAGTTTCAAGCAAAA+GGG | 0.448546 | 1.4:+60606085 | None:intergenic |
| TGCTCAAACCCTTGCAAAGC+AGG | 0.449040 | 1.4:+60605774 | None:intergenic |
| CTGGTGTGGTTTCTAGGTTA+GGG | 0.450011 | 1.4:-60605812 | MS.gene52849:CDS |
| GCAAGAATCTGTATGGTCTT+TGG | 0.454280 | 1.4:-60605426 | MS.gene52849:CDS |
| TAGCTATGGTTGCTGAAGCT+TGG | 0.455269 | 1.4:-60606151 | None:intergenic |
| CAAGGGTTTGAGCATGTGTA+TGG | 0.470411 | 1.4:-60605765 | MS.gene52849:CDS |
| CATACAGATTCTTGCATACA+AGG | 0.476054 | 1.4:+60605434 | None:intergenic |
| AGGAAGGATGGCCTTGGGAT+TGG | 0.480331 | 1.4:-60605390 | MS.gene52849:CDS |
| CAGAATGGGGAGAGTAGAAG+AGG | 0.480582 | 1.4:-60605570 | MS.gene52849:CDS |
| CTTGTATGCAAGAATCTGTA+TGG | 0.486624 | 1.4:-60605433 | MS.gene52849:CDS |
| TCTCAAAGTCCTATTGGGAT+TGG | 0.494966 | 1.4:-60605024 | MS.gene52849:CDS |
| GGGGAAATGGTAGTAGTAGT+AGG | 0.496717 | 1.4:-60605233 | MS.gene52849:CDS |
| ACAGTGAGGAAGGATGGCCT+TGG | 0.497066 | 1.4:-60605396 | MS.gene52849:CDS |
| AGTTAAGCATATGGAAGGAA+TGG | 0.497345 | 1.4:-60605697 | MS.gene52849:CDS |
| AGCTTGATACGCAACTGTAT+TGG | 0.501566 | 1.4:+60605046 | None:intergenic |
| GTGTATGGTGATATTGTTAG+TGG | 0.502554 | 1.4:-60605750 | MS.gene52849:CDS |
| ACTGGAAGGCGACTCTTGAC+GGG | 0.504468 | 1.4:-60604714 | MS.gene52849:CDS |
| CAACAACAAAACGCATTACT+GGG | 0.507166 | 1.4:-60604499 | MS.gene52849:CDS |
| CAGTGAGGAAGGATGGCCTT+GGG | 0.515523 | 1.4:-60605395 | MS.gene52849:CDS |
| AATTTGGTTTCTTCAGAAGA+GGG | 0.530169 | 1.4:-60605888 | MS.gene52849:CDS |
| ATAGGTATGTGAGTGCTACT+AGG | 0.530403 | 1.4:-60605662 | MS.gene52849:CDS |
| GTAGAAGAGGGTTTGAGCAG+AGG | 0.533791 | 1.4:-60605557 | MS.gene52849:CDS |
| GTCTAGCTTGATTAATGTTG+AGG | 0.536642 | 1.4:-60605322 | MS.gene52849:CDS |
| AGCAACGCGGAATAGTTAGC+AGG | 0.538226 | 1.4:-60604627 | MS.gene52849:CDS |
| CGTGCAAAATGAATGTGGTT+CGG | 0.539337 | 1.4:-60605346 | MS.gene52849:CDS |
| CTTGGGATTGGTAATTGTGA+AGG | 0.540837 | 1.4:-60605378 | MS.gene52849:CDS |
| CCCTCTTGCACATGACTGGA+AGG | 0.541581 | 1.4:-60604728 | MS.gene52849:CDS |
| TAATGTTGAGGTGAATTTGT+CGG | 0.544358 | 1.4:-60605310 | MS.gene52849:CDS |
| GTTCTGTGCCTGCTTTGCAA+GGG | 0.544878 | 1.4:-60605782 | MS.gene52849:CDS |
| TGGTGATTCTACAGTGAGGA+AGG | 0.551462 | 1.4:-60605406 | MS.gene52849:CDS |
| TTACAATTTGAGTTCAATTG+GGG | 0.555673 | 1.4:-60605253 | MS.gene52849:CDS |
| ATTGAACCGTGTTGCTGGTG+TGG | 0.556958 | 1.4:-60605826 | MS.gene52849:CDS |
| GAATTTGGTTTCTTCAGAAG+AGG | 0.557080 | 1.4:-60605889 | MS.gene52849:CDS |
| TAATCCACTATTTGGACCAA+AGG | 0.563309 | 1.4:+60604966 | None:intergenic |
| GGAGTTTGTATAGTAAAATG+GGG | 0.565248 | 1.4:-60605641 | MS.gene52849:CDS |
| GAGTTTGTATAGTAAAATGG+GGG | 0.573559 | 1.4:-60605640 | MS.gene52849:CDS |
| CCTTCCAGTCATGTGCAAGA+GGG | 0.574005 | 1.4:+60604728 | None:intergenic |
| GCCTTCCAGTCATGTGCAAG+AGG | 0.575283 | 1.4:+60604727 | None:intergenic |
| CTCTTGACGGGATACTTCGG+TGG | 0.576945 | 1.4:-60604702 | MS.gene52849:CDS |
| GATTCTACAGTGAGGAAGGA+TGG | 0.578251 | 1.4:-60605402 | MS.gene52849:CDS |
| AGGTTGTTGAGTTGTTGGCT+AGG | 0.583359 | 1.4:-60605467 | MS.gene52849:CDS |
| CGACTCTTGACGGGATACTT+CGG | 0.583427 | 1.4:-60604705 | MS.gene52849:CDS |
| TTATAGATGTGAATGAATTG+GGG | 0.583468 | 1.4:-60605725 | MS.gene52849:CDS |
| TTCATCATATTATGAGCAAG+CGG | 0.586075 | 1.4:+60604673 | None:intergenic |
| GAATGGTGAGGAAAATGGAT+AGG | 0.586857 | 1.4:-60605680 | MS.gene52849:CDS |
| CTTTCCACATTTAATTGGCG+AGG | 0.591587 | 1.4:-60604851 | MS.gene52849:CDS |
| AATGAGATCTTGAACTCAGA+GGG | 0.592154 | 1.4:-60605918 | MS.gene52849:CDS |
| TGATGAAATGGCAAAGTGAG+AGG | 0.594896 | 1.4:-60604657 | MS.gene52849:CDS |
| CGCAACTGTATTGGTCCTCA+CGG | 0.599401 | 1.4:+60605055 | None:intergenic |
| CTTCCAGTCATGTGCAAGAG+GGG | 0.606461 | 1.4:+60604729 | None:intergenic |
| AGCTTAAGGAGATTTCACTT+TGG | 0.607378 | 1.4:-60605506 | MS.gene52849:CDS |
| GCTTCCTCGCCAATTAAATG+TGG | 0.610343 | 1.4:+60604847 | None:intergenic |
| CTTCCAGGACTTGTTCCACA+AGG | 0.627608 | 1.4:+60605150 | None:intergenic |
| TCTTCTACTAGTAGAAAACA+TGG | 0.643423 | 1.4:-60606068 | MS.gene52849:CDS |
| AGCATATGGAAGGAATGGTG+AGG | 0.646265 | 1.4:-60605692 | MS.gene52849:CDS |
| CCACTCGTGCAAAATGAATG+TGG | 0.648437 | 1.4:-60605351 | MS.gene52849:CDS |
| TACAATTTGAGTTCAATTGG+GGG | 0.659607 | 1.4:-60605252 | MS.gene52849:CDS |
| AGTTTGTATAGTAAAATGGG+GGG | 0.660331 | 1.4:-60605639 | MS.gene52849:CDS |
| AGAATGGGGAGAGTAGAAGA+GGG | 0.664493 | 1.4:-60605569 | MS.gene52849:CDS |
| CTTCACAATTACCAATCCCA+AGG | 0.665664 | 1.4:+60605379 | None:intergenic |
| TCTCATATAGATATGAAGAG+AGG | 0.666893 | 1.4:-60605210 | MS.gene52849:CDS |
| TCAGAATAATAGCCAGAATG+GGG | 0.670464 | 1.4:-60605583 | MS.gene52849:CDS |
| TGCTGATAAGATAAAGACAG+AGG | 0.679639 | 1.4:-60604572 | MS.gene52849:CDS |
| TAGAAACCACACCAGCAACA+CGG | 0.680939 | 1.4:+60605820 | None:intergenic |
| CATCCTCCAAGAGTAGAAGG+AGG | 0.691868 | 1.4:+60604928 | None:intergenic |
| GAATGAGATCTTGAACTCAG+AGG | 0.696161 | 1.4:-60605919 | MS.gene52849:CDS |
| TGTTCGACGTGAGAAGCTCG+AGG | 0.696638 | 1.4:-60605850 | MS.gene52849:CDS |
| TATGGCAGAAGCAAGATGTG+AGG | 0.708787 | 1.4:-60605530 | MS.gene52849:CDS |
| TGATGTTGCTATCGACCGTG+AGG | 0.708973 | 1.4:-60605070 | MS.gene52849:CDS |
| TCTTTGGTGATTCTACAGTG+AGG | 0.750317 | 1.4:-60605410 | MS.gene52849:CDS |
| ATGAAATGGAAATTGCAGTG+CGG | 0.848060 | 1.4:-60604445 | MS.gene52849:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGAAAGTAGAAACTAT+AGG | - | chr1.4:60604543-60604562 | MS.gene52849:CDS | 20.0% |
| !! | CAATGATTTATAAAGTTGAA+TGG | + | chr1.4:60604607-60604626 | None:intergenic | 20.0% |
| !!! | TTTATAAAGTTGAATGGTTT+TGG | + | chr1.4:60604601-60604620 | None:intergenic | 20.0% |
| ! | AGGAGTTTGTATAGTAAAAT+GGG | - | chr1.4:60604930-60604949 | MS.gene52849:CDS | 25.0% |
| ! | GTTATAGATGTGAATGAATT+GGG | - | chr1.4:60604846-60604865 | MS.gene52849:CDS | 25.0% |
| ! | GTTTAATATTTGCACTTACT+TGG | + | chr1.4:60604464-60604483 | None:intergenic | 25.0% |
| ! | TAAGACATATGTCAAGAATT+TGG | - | chr1.4:60605808-60605827 | MS.gene52849:CDS | 25.0% |
| ! | TAGGAGTTTGTATAGTAAAA+TGG | - | chr1.4:60604929-60604948 | MS.gene52849:CDS | 25.0% |
| ! | TGGAAATATTGTCAAGAAAA+AGG | - | chr1.4:60605568-60605587 | MS.gene52849:CDS | 25.0% |
| ! | TGTTATAGATGTGAATGAAT+TGG | - | chr1.4:60604845-60604864 | MS.gene52849:CDS | 25.0% |
| ! | TTATAGATGTGAATGAATTG+GGG | - | chr1.4:60604847-60604866 | MS.gene52849:CDS | 25.0% |
| ! | TTGCTCATAATATGATGAAA+TGG | - | chr1.4:60605903-60605922 | MS.gene52849:CDS | 25.0% |
| !! | GTTACAATTTGAGTTCAATT+GGG | - | chr1.4:60605318-60605337 | MS.gene52849:CDS | 25.0% |
| !! | TATGTTCAACTTGAAGATTT+TGG | - | chr1.4:60605395-60605414 | MS.gene52849:CDS | 25.0% |
| !! | TTACAATTTGAGTTCAATTG+GGG | - | chr1.4:60605319-60605338 | MS.gene52849:CDS | 25.0% |
| !! | TTCTTATTCTCTTTCCTTTT+AGG | + | chr1.4:60604531-60604550 | None:intergenic | 25.0% |
| !!! | TTTTTAGTTAAGCATATGGA+AGG | - | chr1.4:60604870-60604889 | MS.gene52849:CDS | 25.0% |
| AAAGATAACCTTAAGCTAGT+TGG | + | chr1.4:60605776-60605795 | None:intergenic | 30.0% | |
| ACAATATTTCCAATCCCAAT+AGG | + | chr1.4:60605560-60605579 | None:intergenic | 30.0% | |
| AGAAGAAGTTTCAAGCAAAA+GGG | + | chr1.4:60604490-60604509 | None:intergenic | 30.0% | |
| AGTTTGTATAGTAAAATGGG+GGG | - | chr1.4:60604933-60604952 | MS.gene52849:CDS | 30.0% | |
| ATTTGGAAGATTGCATGAAA+TGG | - | chr1.4:60606113-60606132 | MS.gene52849:CDS | 30.0% | |
| CTTGACATATGTCTTAAGTT+TGG | + | chr1.4:60605804-60605823 | None:intergenic | 30.0% | |
| GAGTTTGTATAGTAAAATGG+GGG | - | chr1.4:60604932-60604951 | MS.gene52849:CDS | 30.0% | |
| GCTATATGTGAACTTCTTAA+AGG | - | chr1.4:60606025-60606044 | MS.gene52849:CDS | 30.0% | |
| GGAGTTTGTATAGTAAAATG+GGG | - | chr1.4:60604931-60604950 | MS.gene52849:CDS | 30.0% | |
| TAATGTTGAGGTGAATTTGT+CGG | - | chr1.4:60605262-60605281 | MS.gene52849:CDS | 30.0% | |
| TAGAAGAAGTTTCAAGCAAA+AGG | + | chr1.4:60604491-60604510 | None:intergenic | 30.0% | |
| TAGCTTAAGGTTATCTTTGA+AGG | - | chr1.4:60605778-60605797 | MS.gene52849:CDS | 30.0% | |
| TCTCATATAGATATGAAGAG+AGG | - | chr1.4:60605362-60605381 | MS.gene52849:CDS | 30.0% | |
| TCTTCTACTAGTAGAAAACA+TGG | - | chr1.4:60604504-60604523 | MS.gene52849:CDS | 30.0% | |
| TTCAGAATAATAGCCAGAAT+GGG | - | chr1.4:60604988-60605007 | MS.gene52849:CDS | 30.0% | |
| TTCATCATATTATGAGCAAG+CGG | + | chr1.4:60605902-60605921 | None:intergenic | 30.0% | |
| TTTCAGAATAATAGCCAGAA+TGG | - | chr1.4:60604987-60605006 | MS.gene52849:CDS | 30.0% | |
| ! | AATCTGAGATAGCAAAGTTA+AGG | - | chr1.4:60604631-60604650 | MS.gene52849:CDS | 30.0% |
| ! | AATTTGGTTTCTTCAGAAGA+GGG | - | chr1.4:60604684-60604703 | MS.gene52849:CDS | 30.0% |
| ! | CTTAGCTTTCCACATTTAAT+TGG | - | chr1.4:60605716-60605735 | MS.gene52849:CDS | 30.0% |
| ! | GGTTACAATTTGAGTTCAAT+TGG | - | chr1.4:60605317-60605336 | MS.gene52849:CDS | 30.0% |
| ! | TACAATTTGAGTTCAATTGG+GGG | - | chr1.4:60605320-60605339 | MS.gene52849:CDS | 30.0% |
| ! | TTGGAATCAGACTTTTGATA+AGG | - | chr1.4:60605085-60605104 | MS.gene52849:CDS | 30.0% |
| AATGAGATCTTGAACTCAGA+GGG | - | chr1.4:60604654-60604673 | MS.gene52849:CDS | 35.0% | |
| ACAACAACAAAACGCATTAC+TGG | - | chr1.4:60606072-60606091 | MS.gene52849:CDS | 35.0% | |
| ACAACAGCTAATCCACTATT+TGG | + | chr1.4:60605617-60605636 | None:intergenic | 35.0% | |
| AGCTTAAGGAGATTTCACTT+TGG | - | chr1.4:60605066-60605085 | MS.gene52849:CDS | 35.0% | |
| AGTTAAGCATATGGAAGGAA+TGG | - | chr1.4:60604875-60604894 | MS.gene52849:CDS | 35.0% | |
| ATGAAATGGAAATTGCAGTG+CGG | - | chr1.4:60606127-60606146 | MS.gene52849:CDS | 35.0% | |
| CAACAACAAAACGCATTACT+GGG | - | chr1.4:60606073-60606092 | MS.gene52849:CDS | 35.0% | |
| CATACAGATTCTTGCATACA+AGG | + | chr1.4:60605141-60605160 | None:intergenic | 35.0% | |
| CTTGTATGCAAGAATCTGTA+TGG | - | chr1.4:60605139-60605158 | MS.gene52849:CDS | 35.0% | |
| GTAGAAAACATGGTCCTAAA+AGG | - | chr1.4:60604514-60604533 | MS.gene52849:CDS | 35.0% | |
| GTGTATGGTGATATTGTTAG+TGG | - | chr1.4:60604822-60604841 | MS.gene52849:CDS | 35.0% | |
| TAATCCACTATTTGGACCAA+AGG | + | chr1.4:60605609-60605628 | None:intergenic | 35.0% | |
| TCAGAATAATAGCCAGAATG+GGG | - | chr1.4:60604989-60605008 | MS.gene52849:CDS | 35.0% | |
| TGCTGATAAGATAAAGACAG+AGG | - | chr1.4:60606000-60606019 | MS.gene52849:CDS | 35.0% | |
| TTGTGCAAGCAGTTTCAATT+TGG | - | chr1.4:60606096-60606115 | MS.gene52849:CDS | 35.0% | |
| ! | GAATTTGGTTTCTTCAGAAG+AGG | - | chr1.4:60604683-60604702 | MS.gene52849:CDS | 35.0% |
| ! | GTCTAGCTTGATTAATGTTG+AGG | - | chr1.4:60605250-60605269 | MS.gene52849:CDS | 35.0% |
| ! | TGATAAGGTTGTTGAGTTGT+TGG | - | chr1.4:60605100-60605119 | MS.gene52849:CDS | 35.0% |
| !! | GAAGCTTGGATTTTGAAGAT+GGG | - | chr1.4:60604435-60604454 | MS.gene52849:CDS | 35.0% |
| !! | TGAAGCTTGGATTTTGAAGA+TGG | - | chr1.4:60604434-60604453 | MS.gene52849:CDS | 35.0% |
| !!! | GAAGATTTTGGTTTTCCTTG+TGG | - | chr1.4:60605407-60605426 | MS.gene52849:CDS | 35.0% |
| !!! | GGGGTTTTTAGTTAAGCATA+TGG | - | chr1.4:60604866-60604885 | MS.gene52849:CDS | 35.0% |
| AGCTTGATACGCAACTGTAT+TGG | + | chr1.4:60605529-60605548 | None:intergenic | 40.0% | |
| CAAGCTCTCAAAGTCCTATT+GGG | - | chr1.4:60605543-60605562 | MS.gene52849:CDS | 40.0% | |
| CATTCCATGAAAAGTCTTCC+AGG | + | chr1.4:60605440-60605459 | None:intergenic | 40.0% | |
| CGTGCAAAATGAATGTGGTT+CGG | - | chr1.4:60605226-60605245 | MS.gene52849:CDS | 40.0% | |
| CTTCACAATTACCAATCCCA+AGG | + | chr1.4:60605196-60605215 | None:intergenic | 40.0% | |
| CTTTCCACATTTAATTGGCG+AGG | - | chr1.4:60605721-60605740 | MS.gene52849:CDS | 40.0% | |
| GAATGAGATCTTGAACTCAG+AGG | - | chr1.4:60604653-60604672 | MS.gene52849:CDS | 40.0% | |
| GAATGGTGAGGAAAATGGAT+AGG | - | chr1.4:60604892-60604911 | MS.gene52849:CDS | 40.0% | |
| GCAAGAATCTGTATGGTCTT+TGG | - | chr1.4:60605146-60605165 | MS.gene52849:CDS | 40.0% | |
| TCAACCTTTGGTCCAAATAG+TGG | - | chr1.4:60605602-60605621 | MS.gene52849:CDS | 40.0% | |
| TCAAGCTCTCAAAGTCCTAT+TGG | - | chr1.4:60605542-60605561 | MS.gene52849:CDS | 40.0% | |
| TCTCAAAGTCCTATTGGGAT+TGG | - | chr1.4:60605548-60605567 | MS.gene52849:CDS | 40.0% | |
| TGATGAAATGGCAAAGTGAG+AGG | - | chr1.4:60605915-60605934 | MS.gene52849:CDS | 40.0% | |
| TTGAGTTCAATTGGGGGAAA+TGG | - | chr1.4:60605326-60605345 | MS.gene52849:CDS | 40.0% | |
| ! | AAGTCCTGGAAGACTTTTCA+TGG | - | chr1.4:60605433-60605452 | MS.gene52849:CDS | 40.0% |
| ! | AGATGTTGCCAACTAGCTTA+AGG | - | chr1.4:60605765-60605784 | MS.gene52849:CDS | 40.0% |
| ! | ATAGGTATGTGAGTGCTACT+AGG | - | chr1.4:60604910-60604929 | MS.gene52849:CDS | 40.0% |
| ! | CTTGGGATTGGTAATTGTGA+AGG | - | chr1.4:60605194-60605213 | MS.gene52849:CDS | 40.0% |
| ! | TCTTTGGTGATTCTACAGTG+AGG | - | chr1.4:60605162-60605181 | MS.gene52849:CDS | 40.0% |
| AATGGGGGGTTTGAATGAGT+TGG | - | chr1.4:60604947-60604966 | MS.gene52849:CDS | 45.0% | |
| AGAATGGGGAGAGTAGAAGA+GGG | - | chr1.4:60605003-60605022 | MS.gene52849:CDS | 45.0% | |
| AGCATATGGAAGGAATGGTG+AGG | - | chr1.4:60604880-60604899 | MS.gene52849:CDS | 45.0% | |
| CAAGGGTTTGAGCATGTGTA+TGG | - | chr1.4:60604807-60604826 | MS.gene52849:CDS | 45.0% | |
| CCACTCGTGCAAAATGAATG+TGG | - | chr1.4:60605221-60605240 | MS.gene52849:CDS | 45.0% | |
| CGCAGTCATAGCAAGAAAAC+TGG | - | chr1.4:60605296-60605315 | MS.gene52849:CDS | 45.0% | |
| GAGCACTTATGCTCAACCTT+TGG | - | chr1.4:60605590-60605609 | MS.gene52849:CDS | 45.0% | |
| GATTCTACAGTGAGGAAGGA+TGG | - | chr1.4:60605170-60605189 | MS.gene52849:CDS | 45.0% | |
| GCTTCCTCGCCAATTAAATG+TGG | + | chr1.4:60605728-60605747 | None:intergenic | 45.0% | |
| GGAAGGAATGGTGAGGAAAA+TGG | - | chr1.4:60604887-60604906 | MS.gene52849:CDS | 45.0% | |
| GGGGAAATGGTAGTAGTAGT+AGG | - | chr1.4:60605339-60605358 | MS.gene52849:CDS | 45.0% | |
| TAGAAACCACACCAGCAACA+CGG | + | chr1.4:60604755-60604774 | None:intergenic | 45.0% | |
| TATGCTCCTCCTTCTACTCT+TGG | - | chr1.4:60605638-60605657 | MS.gene52849:CDS | 45.0% | |
| TATGGCAGAAGCAAGATGTG+AGG | - | chr1.4:60605042-60605061 | MS.gene52849:CDS | 45.0% | |
| TGGTGATTCTACAGTGAGGA+AGG | - | chr1.4:60605166-60605185 | MS.gene52849:CDS | 45.0% | |
| TTTCCTTGTGGAACAAGTCC+TGG | - | chr1.4:60605419-60605438 | MS.gene52849:CDS | 45.0% | |
| ! | AGGTTGTTGAGTTGTTGGCT+AGG | - | chr1.4:60605105-60605124 | MS.gene52849:CDS | 45.0% |
| ! | CCACATTCATTTTGCACGAG+TGG | + | chr1.4:60605224-60605243 | None:intergenic | 45.0% |
| ! | CTGGTGTGGTTTCTAGGTTA+GGG | - | chr1.4:60604760-60604779 | MS.gene52849:CDS | 45.0% |
| ! | GAGAGGAATTTTGAGCAACG+CGG | - | chr1.4:60605932-60605951 | MS.gene52849:CDS | 45.0% |
| !! | CTCAGAGGGTGTTAGGAATT+TGG | - | chr1.4:60604668-60604687 | MS.gene52849:CDS | 45.0% |
| !! | TCTTGAACTCAGAGGGTGTT+AGG | - | chr1.4:60604661-60604680 | MS.gene52849:CDS | 45.0% |
| !! | TGCAAGAGGGGCATCATATA+TGG | + | chr1.4:60605834-60605853 | None:intergenic | 45.0% |
| AGCAACGCGGAATAGTTAGC+AGG | - | chr1.4:60605945-60605964 | MS.gene52849:CDS | 50.0% | |
| CAGAATGGGGAGAGTAGAAG+AGG | - | chr1.4:60605002-60605021 | MS.gene52849:CDS | 50.0% | |
| CATCCTCCAAGAGTAGAAGG+AGG | + | chr1.4:60605647-60605666 | None:intergenic | 50.0% | |
| CCTTCCAGTCATGTGCAAGA+GGG | + | chr1.4:60605847-60605866 | None:intergenic | 50.0% | |
| CGACTCTTGACGGGATACTT+CGG | - | chr1.4:60605867-60605886 | MS.gene52849:CDS | 50.0% | |
| CTCTTCTACTCTCCCCATTC+TGG | + | chr1.4:60605004-60605023 | None:intergenic | 50.0% | |
| CTTCCAGTCATGTGCAAGAG+GGG | + | chr1.4:60605846-60605865 | None:intergenic | 50.0% | |
| GAGGAATTGAACCGTGTTGC+TGG | - | chr1.4:60604741-60604760 | MS.gene52849:CDS | 50.0% | |
| GCAAGATGTGAGGCAGCTTA+AGG | - | chr1.4:60605052-60605071 | MS.gene52849:CDS | 50.0% | |
| GCACATCCTCCAAGAGTAGA+AGG | + | chr1.4:60605650-60605669 | None:intergenic | 50.0% | |
| GGTTTGAGCAGAGGCTTGTA+TGG | - | chr1.4:60605024-60605043 | MS.gene52849:CDS | 50.0% | |
| GTAGAAGAGGGTTTGAGCAG+AGG | - | chr1.4:60605015-60605034 | MS.gene52849:CDS | 50.0% | |
| GTTCTGTGCCTGCTTTGCAA+GGG | - | chr1.4:60604790-60604809 | MS.gene52849:CDS | 50.0% | |
| TGATGTTGCTATCGACCGTG+AGG | - | chr1.4:60605502-60605521 | MS.gene52849:CDS | 50.0% | |
| TGCTCAAACCCTTGCAAAGC+AGG | + | chr1.4:60604801-60604820 | None:intergenic | 50.0% | |
| TGTTCTGTGCCTGCTTTGCA+AGG | - | chr1.4:60604789-60604808 | MS.gene52849:CDS | 50.0% | |
| ! | ATTGAACCGTGTTGCTGGTG+TGG | - | chr1.4:60604746-60604765 | MS.gene52849:CDS | 50.0% |
| ! | CGCAACTGTATTGGTCCTCA+CGG | + | chr1.4:60605520-60605539 | None:intergenic | 50.0% |
| ! | CTTCCAGGACTTGTTCCACA+AGG | + | chr1.4:60605425-60605444 | None:intergenic | 50.0% |
| ! | GCTGGTGTGGTTTCTAGGTT+AGG | - | chr1.4:60604759-60604778 | MS.gene52849:CDS | 50.0% |
| ! | GTGTTGCTGGTGTGGTTTCT+AGG | - | chr1.4:60604754-60604773 | MS.gene52849:CDS | 50.0% |
| ACAGTGAGGAAGGATGGCCT+TGG | - | chr1.4:60605176-60605195 | MS.gene52849:CDS | 55.0% | |
| ACTGGAAGGCGACTCTTGAC+GGG | - | chr1.4:60605858-60605877 | MS.gene52849:CDS | 55.0% | |
| ATGCCCCTCTTGCACATGAC+TGG | - | chr1.4:60605840-60605859 | MS.gene52849:CDS | 55.0% | |
| CAGTGAGGAAGGATGGCCTT+GGG | - | chr1.4:60605177-60605196 | MS.gene52849:CDS | 55.0% | |
| CCCTCTTGCACATGACTGGA+AGG | - | chr1.4:60605844-60605863 | MS.gene52849:CDS | 55.0% | |
| CTCTTGACGGGATACTTCGG+TGG | - | chr1.4:60605870-60605889 | MS.gene52849:CDS | 55.0% | |
| GACTGGAAGGCGACTCTTGA+CGG | - | chr1.4:60605857-60605876 | MS.gene52849:CDS | 55.0% | |
| GCCTTCCAGTCATGTGCAAG+AGG | + | chr1.4:60605848-60605867 | None:intergenic | 55.0% | |
| GCTCCTCCTTCTACTCTTGG+AGG | - | chr1.4:60605641-60605660 | MS.gene52849:CDS | 55.0% | |
| TGTTCGACGTGAGAAGCTCG+AGG | - | chr1.4:60604722-60604741 | MS.gene52849:CDS | 55.0% | |
| ! | AGGAAGGATGGCCTTGGGAT+TGG | - | chr1.4:60605182-60605201 | MS.gene52849:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 60604426 | 60606168 | 60604426 | ID=MS.gene52849 |
| chr1.4 | mRNA | 60604426 | 60606168 | 60604426 | ID=MS.gene52849.t1;Parent=MS.gene52849 |
| chr1.4 | exon | 60604426 | 60606168 | 60604426 | ID=MS.gene52849.t1.exon1;Parent=MS.gene52849.t1 |
| chr1.4 | CDS | 60604426 | 60606168 | 60604426 | ID=cds.MS.gene52849.t1;Parent=MS.gene52849.t1 |
| Gene Sequence |
| Protein sequence |
