Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58248.t1 | XP_003627627.1 | 95.9 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 1.30E-74 | 288.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58248.t1 | Q25AG5 | 55.9 | 145 | 63 | 1 | 1 | 145 | 1 | 144 | 4.4e-42 | 172.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58248.t1 | G7LCN6 | 95.9 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 9.7e-75 | 288.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene58248 | 0.819551 | 1.09E-52 | -1.69E-46 |
| MS.gene04920 | MS.gene58248 | 0.806293 | 8.83E-50 | -1.69E-46 |
| MS.gene049254 | MS.gene58248 | 0.807736 | 4.37E-50 | -1.69E-46 |
| MS.gene049499 | MS.gene58248 | 0.843002 | 1.83E-58 | -1.69E-46 |
| MS.gene049711 | MS.gene58248 | 0.819984 | 8.71E-53 | -1.69E-46 |
| MS.gene049807 | MS.gene58248 | 0.813724 | 2.21E-51 | -1.69E-46 |
| MS.gene049976 | MS.gene58248 | 0.829701 | 4.44E-55 | -1.69E-46 |
| MS.gene049977 | MS.gene58248 | 0.812938 | 3.30E-51 | -1.69E-46 |
| MS.gene050238 | MS.gene58248 | 0.830515 | 2.81E-55 | -1.69E-46 |
| MS.gene050559 | MS.gene58248 | 0.825651 | 4.17E-54 | -1.69E-46 |
| MS.gene050561 | MS.gene58248 | 0.810715 | 1.00E-50 | -1.69E-46 |
| MS.gene050562 | MS.gene58248 | 0.817776 | 2.77E-52 | -1.69E-46 |
| MS.gene050646 | MS.gene58248 | 0.805876 | 1.08E-49 | -1.69E-46 |
| MS.gene051019 | MS.gene58248 | 0.806337 | 8.64E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene58248 | 0.808491 | 3.02E-50 | -1.69E-46 |
| MS.gene051538 | MS.gene58248 | 0.806616 | 7.54E-50 | -1.69E-46 |
| MS.gene051699 | MS.gene58248 | 0.821476 | 3.96E-53 | -1.69E-46 |
| MS.gene051832 | MS.gene58248 | 0.835861 | 1.31E-56 | -1.69E-46 |
| MS.gene05191 | MS.gene58248 | 0.800417 | 1.46E-48 | -1.69E-46 |
| MS.gene052037 | MS.gene58248 | 0.80347 | 3.43E-49 | -1.69E-46 |
| MS.gene052239 | MS.gene58248 | -0.829328 | 5.47E-55 | -1.69E-46 |
| MS.gene052533 | MS.gene58248 | 0.832212 | 1.08E-55 | -1.69E-46 |
| MS.gene052570 | MS.gene58248 | 0.805308 | 1.42E-49 | -1.69E-46 |
| MS.gene052628 | MS.gene58248 | 0.812937 | 3.30E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene58248 | 0.825347 | 4.93E-54 | -1.69E-46 |
| MS.gene053272 | MS.gene58248 | -0.808758 | 2.65E-50 | -1.69E-46 |
| MS.gene054490 | MS.gene58248 | 0.808917 | 2.45E-50 | -1.69E-46 |
| MS.gene054709 | MS.gene58248 | 0.854994 | 8.50E-62 | -1.69E-46 |
| MS.gene055229 | MS.gene58248 | 0.80535 | 1.39E-49 | -1.69E-46 |
| MS.gene055464 | MS.gene58248 | 0.820017 | 8.57E-53 | -1.69E-46 |
| MS.gene055724 | MS.gene58248 | 0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene58248 | 0.814844 | 1.25E-51 | -1.69E-46 |
| MS.gene056272 | MS.gene58248 | 0.801121 | 1.05E-48 | -1.69E-46 |
| MS.gene056677 | MS.gene58248 | 0.864042 | 1.62E-64 | -1.69E-46 |
| MS.gene056699 | MS.gene58248 | 0.807418 | 5.11E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene58248 | 0.823336 | 1.46E-53 | -1.69E-46 |
| MS.gene057102 | MS.gene58248 | 0.863216 | 2.92E-64 | -1.69E-46 |
| MS.gene058279 | MS.gene58248 | 0.809038 | 2.31E-50 | -1.69E-46 |
| MS.gene058592 | MS.gene58248 | 0.803541 | 3.32E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene58248 | 0.804606 | 1.99E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene58248 | 0.830195 | 3.37E-55 | -1.69E-46 |
| MS.gene05985 | MS.gene58248 | -0.846441 | 2.17E-59 | -1.69E-46 |
| MS.gene060935 | MS.gene58248 | 0.81129 | 7.54E-51 | -1.69E-46 |
| MS.gene060937 | MS.gene58248 | 0.821026 | 5.02E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene58248 | 0.825212 | 5.30E-54 | -1.69E-46 |
| MS.gene061188 | MS.gene58248 | 0.832333 | 1.00E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58248.t1 | MTR_8g032320 | 95.946 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 3.88e-103 | 291 |
| MS.gene58248.t1 | MTR_8g032300 | 83.784 | 148 | 24 | 0 | 1 | 148 | 1 | 148 | 8.89e-93 | 265 |
| MS.gene58248.t1 | MTR_1g008950 | 63.200 | 125 | 46 | 0 | 1 | 125 | 1 | 125 | 2.65e-57 | 175 |
| MS.gene58248.t1 | MTR_5g079880 | 40.645 | 155 | 77 | 4 | 1 | 144 | 1 | 151 | 6.88e-37 | 124 |
| MS.gene58248.t1 | MTR_5g079890 | 40.506 | 158 | 78 | 5 | 1 | 145 | 1 | 155 | 1.09e-33 | 116 |
| MS.gene58248.t1 | MTR_5g079890 | 40.580 | 138 | 69 | 4 | 1 | 125 | 1 | 138 | 9.07e-30 | 105 |
| MS.gene58248.t1 | MTR_8g030870 | 33.108 | 148 | 85 | 4 | 1 | 135 | 1 | 147 | 2.95e-20 | 82.4 |
| MS.gene58248.t1 | MTR_7g075960 | 56.604 | 53 | 23 | 0 | 25 | 77 | 1 | 53 | 1.85e-19 | 77.0 |
| MS.gene58248.t1 | MTR_5g004800 | 26.984 | 126 | 90 | 2 | 6 | 130 | 15 | 139 | 1.06e-13 | 66.2 |
| MS.gene58248.t1 | MTR_3g106660 | 33.333 | 126 | 78 | 4 | 3 | 126 | 439 | 560 | 5.95e-13 | 65.5 |
| MS.gene58248.t1 | MTR_3g106660 | 30.303 | 132 | 82 | 4 | 2 | 124 | 255 | 385 | 4.77e-11 | 59.7 |
| MS.gene58248.t1 | MTR_2g027100 | 38.542 | 96 | 57 | 2 | 4 | 99 | 6 | 99 | 6.12e-13 | 62.8 |
| MS.gene58248.t1 | MTR_5g004870 | 28.571 | 119 | 83 | 2 | 6 | 123 | 11 | 128 | 9.60e-13 | 63.9 |
| MS.gene58248.t1 | MTR_4g115660 | 36.275 | 102 | 62 | 3 | 3 | 102 | 440 | 540 | 6.95e-11 | 59.3 |
| MS.gene58248.t1 | MTR_3g017500 | 33.000 | 100 | 65 | 2 | 4 | 103 | 244 | 341 | 7.99e-11 | 58.9 |
| MS.gene58248.t1 | MTR_3g017500 | 33.000 | 100 | 65 | 2 | 4 | 103 | 214 | 311 | 8.11e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58248.t1 | AT1G63220 | 56.757 | 148 | 63 | 1 | 1 | 148 | 1 | 147 | 3.61e-56 | 172 |
| MS.gene58248.t1 | AT1G63220 | 52.703 | 148 | 55 | 2 | 1 | 148 | 1 | 133 | 4.46e-47 | 149 |
| MS.gene58248.t1 | AT3G55470 | 37.342 | 158 | 85 | 4 | 1 | 147 | 1 | 155 | 6.57e-27 | 99.0 |
| MS.gene58248.t1 | AT3G55470 | 37.736 | 159 | 84 | 5 | 1 | 147 | 1 | 156 | 7.05e-26 | 96.3 |
| MS.gene58248.t1 | AT4G00467 | 33.083 | 133 | 78 | 3 | 1 | 122 | 1 | 133 | 7.53e-18 | 76.3 |
| MS.gene58248.t1 | AT4G00467 | 33.083 | 133 | 78 | 3 | 1 | 122 | 1 | 133 | 1.23e-17 | 76.3 |
| MS.gene58248.t1 | AT5G47710 | 38.776 | 98 | 58 | 2 | 2 | 99 | 4 | 99 | 6.81e-14 | 65.5 |
| MS.gene58248.t1 | AT5G47710 | 38.776 | 98 | 58 | 2 | 2 | 99 | 4 | 99 | 6.81e-14 | 65.5 |
| MS.gene58248.t1 | AT5G47710 | 38.776 | 98 | 58 | 2 | 2 | 99 | 4 | 99 | 6.81e-14 | 65.5 |
| MS.gene58248.t1 | AT5G47710 | 38.776 | 98 | 58 | 2 | 2 | 99 | 4 | 99 | 6.81e-14 | 65.5 |
| MS.gene58248.t1 | AT4G34150 | 27.966 | 118 | 83 | 2 | 6 | 122 | 12 | 128 | 2.81e-13 | 65.1 |
| MS.gene58248.t1 | AT5G04220 | 29.452 | 146 | 90 | 4 | 2 | 135 | 37 | 181 | 2.65e-12 | 63.2 |
| MS.gene58248.t1 | AT5G04220 | 29.452 | 146 | 90 | 4 | 2 | 135 | 197 | 341 | 3.55e-12 | 63.2 |
| MS.gene58248.t1 | AT5G04220 | 29.054 | 148 | 92 | 4 | 2 | 137 | 259 | 405 | 4.29e-12 | 62.8 |
| MS.gene58248.t1 | AT1G05500 | 35.200 | 125 | 75 | 5 | 3 | 125 | 290 | 410 | 2.77e-11 | 60.5 |
| MS.gene58248.t1 | AT1G05500 | 35.200 | 125 | 75 | 5 | 3 | 125 | 434 | 554 | 3.63e-11 | 60.1 |
| MS.gene58248.t1 | AT1G03370 | 33.065 | 124 | 76 | 3 | 6 | 123 | 3 | 125 | 5.05e-11 | 60.1 |
| MS.gene58248.t1 | AT1G03370 | 33.065 | 124 | 76 | 3 | 6 | 123 | 3 | 125 | 6.38e-11 | 59.7 |
Find 26 sgRNAs with CRISPR-Local
Find 59 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAATAATGATGATAATAT+TGG | 0.281672 | 8.4:+64381428 | MS.gene58248:CDS |
| AGAATATTGTGGAGAGATTA+AGG | 0.301540 | 8.4:+64381980 | MS.gene58248:CDS |
| TGAGCTGAATCTAAAGATAA+TGG | 0.346296 | 8.4:+64381394 | MS.gene58248:CDS |
| ACAAGATTGTAAGAATTCTC+TGG | 0.392769 | 8.4:-64381948 | None:intergenic |
| GCTCCTGTGCTTTGTAACTA+AGG | 0.446848 | 8.4:-64381195 | None:intergenic |
| GAAAAGTCTCATTCCATTGT+GGG | 0.465952 | 8.4:-64381346 | None:intergenic |
| GAATCTAAAGATAATGGAAA+AGG | 0.493781 | 8.4:+64381400 | MS.gene58248:CDS |
| TCTTCAAACACTGCTTCTAA+AGG | 0.503608 | 8.4:-64381915 | None:intergenic |
| AAGAGGAGGAGACTGGTGGA+TGG | 0.524498 | 8.4:+64382150 | MS.gene58248:CDS |
| TACAATGAAGAGGAGGAGAC+TGG | 0.545609 | 8.4:+64382143 | MS.gene58248:CDS |
| AGAAAAGTCTCATTCCATTG+TGG | 0.555092 | 8.4:-64381347 | None:intergenic |
| TTGTAACTAAGGATCACATA+AGG | 0.555757 | 8.4:-64381184 | None:intergenic |
| CACAAGAGTAAAGTTCAAGA+AGG | 0.561261 | 8.4:+64381217 | MS.gene58248:CDS |
| TTAGAAGCAGTGTTTGAAGA+GGG | 0.587548 | 8.4:+64381918 | MS.gene58248:CDS |
| GTGAAGGATGAAGAATATTG+TGG | 0.592520 | 8.4:+64381969 | MS.gene58248:CDS |
| GATCCTTAGTTACAAAGCAC+AGG | 0.599886 | 8.4:+64381192 | MS.gene58248:CDS |
| TGATCAGAGTTACAATGAAG+AGG | 0.605643 | 8.4:+64382133 | MS.gene58248:CDS |
| TTTAGAAGCAGTGTTTGAAG+AGG | 0.610475 | 8.4:+64381917 | MS.gene58248:CDS |
| GAATTCTTACAATCTTGTGA+AGG | 0.613624 | 8.4:+64381953 | MS.gene58248:CDS |
| TCAGAGTTACAATGAAGAGG+AGG | 0.621822 | 8.4:+64382136 | MS.gene58248:CDS |
| AATGAAGAGGAGGAGACTGG+TGG | 0.640663 | 8.4:+64382146 | MS.gene58248:CDS |
| GATTGTAAGAATTCTCTGGA+AGG | 0.642476 | 8.4:-64381944 | None:intergenic |
| AATCAAAGAAAGATGCCTCG+TGG | 0.675663 | 8.4:+64380678 | None:intergenic |
| GTGCTGGATCTAACCCACAA+TGG | 0.679425 | 8.4:+64381333 | MS.gene58248:CDS |
| ATATTGTGGAGAGATTAAGG+TGG | 0.788819 | 8.4:+64381983 | MS.gene58248:CDS |
| ATAACTTCAAGAGTTCCACG+AGG | 0.830018 | 8.4:-64380693 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATAATGATGATAATAT+TGG | + | chr8.4:64381428-64381447 | MS.gene58248:CDS | 10.0% |
| !! | AACAATTTAATTAGTTAAGT+TGG | - | chr8.4:64381109-64381128 | None:intergenic | 15.0% |
| !! | TAAAATGTACTATCAATTAT+TGG | + | chr8.4:64382096-64382115 | MS.gene58248:intron | 15.0% |
| !! | TAATGAAATATAAACAAAAG+TGG | - | chr8.4:64381656-64381675 | None:intergenic | 15.0% |
| !!! | AATTGATAGTACATTTTAAT+AGG | - | chr8.4:64382094-64382113 | None:intergenic | 15.0% |
| !!! | ATTGATAGTACATTTTAATA+GGG | - | chr8.4:64382093-64382112 | None:intergenic | 15.0% |
| !!! | CAATAATCAAATTATTTTTC+AGG | - | chr8.4:64380905-64380924 | None:intergenic | 15.0% |
| !!! | CTTTTGTTTATATTTCATTA+TGG | + | chr8.4:64381656-64381675 | MS.gene58248:intron | 15.0% |
| !!! | TATCTTTTTATGAATAAATC+AGG | + | chr8.4:64381311-64381330 | MS.gene58248:intron | 15.0% |
| !! | AGAAATTATTCATTCTAAGT+TGG | + | chr8.4:64380931-64380950 | MS.gene58248:intron | 20.0% |
| !! | GTTTAAAAATTTACACCTAA+AGG | + | chr8.4:64381735-64381754 | MS.gene58248:intron | 20.0% |
| !! | TGAAATATAAGCAAAAAAGT+AGG | + | chr8.4:64381583-64381602 | MS.gene58248:intron | 20.0% |
| !!! | AAACATAAGTAGTATTGATT+TGG | + | chr8.4:64381252-64381271 | MS.gene58248:intron | 20.0% |
| !!! | TTTTTGCTTATATTTCATTC+TGG | - | chr8.4:64381580-64381599 | None:intergenic | 20.0% |
| ! | AAAAATTTACACCTAAAGGA+GGG | + | chr8.4:64381739-64381758 | MS.gene58248:intron | 25.0% |
| ! | AAAATTGAAAGTCAAACTCT+TGG | - | chr8.4:64380862-64380881 | None:intergenic | 25.0% |
| ! | GAAATATTTGCATGAAACAA+TGG | + | chr8.4:64380834-64380853 | MS.gene58248:intron | 25.0% |
| ! | GTAATTCTATGTCTATACAT+AGG | + | chr8.4:64380761-64380780 | MS.gene58248:intron | 25.0% |
| ! | TAAAAATTTACACCTAAAGG+AGG | + | chr8.4:64381738-64381757 | MS.gene58248:intron | 25.0% |
| !! | TGTCTTTGATTCATCTTTTT+AGG | + | chr8.4:64381491-64381510 | MS.gene58248:intron | 25.0% |
| !!! | AGAGTTTGACTTTCAATTTT+TGG | + | chr8.4:64380862-64380881 | MS.gene58248:intron | 25.0% |
| !!! | GAATCTAAAGATAATGGAAA+AGG | + | chr8.4:64381400-64381419 | MS.gene58248:CDS | 25.0% |
| !!! | TTTGTTATTTTGTTCTCTAG+TGG | + | chr8.4:64381278-64381297 | MS.gene58248:intron | 25.0% |
| ACAAGATTGTAAGAATTCTC+TGG | - | chr8.4:64381951-64381970 | None:intergenic | 30.0% | |
| AGAATATTGTGGAGAGATTA+AGG | + | chr8.4:64381980-64381999 | MS.gene58248:CDS | 30.0% | |
| GAATTCTTACAATCTTGTGA+AGG | + | chr8.4:64381953-64381972 | MS.gene58248:CDS | 30.0% | |
| GAGAAAGTAAGTGTTAAAGT+TGG | + | chr8.4:64381678-64381697 | MS.gene58248:intron | 30.0% | |
| GTTTGACTATGTAACTTCAA+AGG | - | chr8.4:64381829-64381848 | None:intergenic | 30.0% | |
| TGAGCTGAATCTAAAGATAA+TGG | + | chr8.4:64381394-64381413 | MS.gene58248:CDS | 30.0% | |
| TTGCTTATATTTCATTCTGG+AGG | - | chr8.4:64381577-64381596 | None:intergenic | 30.0% | |
| TTGTAACTAAGGATCACATA+AGG | - | chr8.4:64381187-64381206 | None:intergenic | 30.0% | |
| TTTATGAATAAATCAGGTGC+TGG | + | chr8.4:64381317-64381336 | MS.gene58248:intron | 30.0% | |
| !! | TTATATAGCCTTATTACCTC+AGG | - | chr8.4:64382023-64382042 | None:intergenic | 30.0% |
| !!! | GTTATTTTGATCAGTGCTAA+AGG | + | chr8.4:64380711-64380730 | MS.gene58248:CDS | 30.0% |
| AAAATTGAACGAGATGTCAG+TGG | - | chr8.4:64381857-64381876 | None:intergenic | 35.0% | |
| AGAAAAGTCTCATTCCATTG+TGG | - | chr8.4:64381350-64381369 | None:intergenic | 35.0% | |
| ATATTGTGGAGAGATTAAGG+TGG | + | chr8.4:64381983-64382002 | MS.gene58248:CDS | 35.0% | |
| CACAAGAGTAAAGTTCAAGA+AGG | + | chr8.4:64381217-64381236 | MS.gene58248:CDS | 35.0% | |
| GAAAAGTCTCATTCCATTGT+GGG | - | chr8.4:64381349-64381368 | None:intergenic | 35.0% | |
| GATTGTAAGAATTCTCTGGA+AGG | - | chr8.4:64381947-64381966 | None:intergenic | 35.0% | |
| GTGAAGGATGAAGAATATTG+TGG | + | chr8.4:64381969-64381988 | MS.gene58248:CDS | 35.0% | |
| GTTGGATTCTCATTGAAAGT+TGG | + | chr8.4:64381696-64381715 | MS.gene58248:intron | 35.0% | |
| TCTTCAAACACTGCTTCTAA+AGG | - | chr8.4:64381918-64381937 | None:intergenic | 35.0% | |
| TGATCAGAGTTACAATGAAG+AGG | + | chr8.4:64382133-64382152 | MS.gene58248:CDS | 35.0% | |
| TTAGAAGCAGTGTTTGAAGA+GGG | + | chr8.4:64381918-64381937 | MS.gene58248:CDS | 35.0% | |
| TTTAGAAGCAGTGTTTGAAG+AGG | + | chr8.4:64381917-64381936 | MS.gene58248:CDS | 35.0% | |
| ! | CTTTTACACCTGAGGTAATA+AGG | + | chr8.4:64382012-64382031 | MS.gene58248:intron | 35.0% |
| ATAACTTCAAGAGTTCCACG+AGG | - | chr8.4:64380696-64380715 | None:intergenic | 40.0% | |
| GATCCTTAGTTACAAAGCAC+AGG | + | chr8.4:64381192-64381211 | MS.gene58248:CDS | 40.0% | |
| TCAGAGTTACAATGAAGAGG+AGG | + | chr8.4:64382136-64382155 | MS.gene58248:CDS | 40.0% | |
| AGTTGCAAAGTCGACGTATG+TGG | - | chr8.4:64381632-64381651 | None:intergenic | 45.0% | |
| GCTCCTGTGCTTTGTAACTA+AGG | - | chr8.4:64381198-64381217 | None:intergenic | 45.0% | |
| TACAATGAAGAGGAGGAGAC+TGG | + | chr8.4:64382143-64382162 | MS.gene58248:CDS | 45.0% | |
| TTTCCTTTGTGCCCTCCTTT+AGG | - | chr8.4:64381753-64381772 | None:intergenic | 45.0% | |
| AATGAAGAGGAGGAGACTGG+TGG | + | chr8.4:64382146-64382165 | MS.gene58248:CDS | 50.0% | |
| GTGCTGGATCTAACCCACAA+TGG | + | chr8.4:64381333-64381352 | MS.gene58248:CDS | 50.0% | |
| ! | ACACCTAAAGGAGGGCACAA+AGG | + | chr8.4:64381747-64381766 | MS.gene58248:intron | 50.0% |
| !! | GGCTCTCACTTTTACACCTG+AGG | + | chr8.4:64382004-64382023 | MS.gene58248:CDS | 50.0% |
| AAGAGGAGGAGACTGGTGGA+TGG | + | chr8.4:64382150-64382169 | MS.gene58248:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 64380690 | 64382196 | 64380690 | ID=MS.gene58248 |
| chr8.4 | mRNA | 64380690 | 64382196 | 64380690 | ID=MS.gene58248.t1;Parent=MS.gene58248 |
| chr8.4 | exon | 64380690 | 64380756 | 64380690 | ID=MS.gene58248.t1.exon1;Parent=MS.gene58248.t1 |
| chr8.4 | CDS | 64380690 | 64380756 | 64380690 | ID=cds.MS.gene58248.t1;Parent=MS.gene58248.t1 |
| chr8.4 | exon | 64381173 | 64381238 | 64381173 | ID=MS.gene58248.t1.exon2;Parent=MS.gene58248.t1 |
| chr8.4 | CDS | 64381173 | 64381238 | 64381173 | ID=cds.MS.gene58248.t1;Parent=MS.gene58248.t1 |
| chr8.4 | exon | 64381333 | 64381459 | 64381333 | ID=MS.gene58248.t1.exon3;Parent=MS.gene58248.t1 |
| chr8.4 | CDS | 64381333 | 64381459 | 64381333 | ID=cds.MS.gene58248.t1;Parent=MS.gene58248.t1 |
| chr8.4 | exon | 64381911 | 64382025 | 64381911 | ID=MS.gene58248.t1.exon4;Parent=MS.gene58248.t1 |
| chr8.4 | CDS | 64381911 | 64382025 | 64381911 | ID=cds.MS.gene58248.t1;Parent=MS.gene58248.t1 |
| chr8.4 | exon | 64382125 | 64382196 | 64382125 | ID=MS.gene58248.t1.exon5;Parent=MS.gene58248.t1 |
| chr8.4 | CDS | 64382125 | 64382196 | 64382125 | ID=cds.MS.gene58248.t1;Parent=MS.gene58248.t1 |
| Gene Sequence |
| Protein sequence |
