AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59811


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59811.t1 MTR_8g044210 98.554 1176 17 0 1 1176 1 1176 0.0 2411
MS.gene59811.t1 MTR_3g007240 77.739 1159 234 7 21 1175 73 1211 0.0 1836
MS.gene59811.t1 MTR_3g007240 76.773 874 179 7 21 890 73 926 0.0 1350
MS.gene59811.t1 MTR_7g073480 58.047 1137 432 10 64 1159 137 1269 0.0 1306
MS.gene59811.t1 MTR_5g037210 36.972 1136 637 20 70 1157 24 1128 0.0 711
MS.gene59811.t1 MTR_6g006910 37.413 1144 646 24 69 1156 37 1166 0.0 689
MS.gene59811.t1 MTR_2g099690 36.395 1154 647 25 69 1156 40 1172 0.0 684
MS.gene59811.t1 MTR_8g069920 36.537 1103 641 19 86 1143 67 1155 0.0 682
MS.gene59811.t1 MTR_4g112430 37.140 1077 613 22 69 1100 38 1095 0.0 677
MS.gene59811.t1 MTR_3g037330 36.601 1112 641 23 78 1143 41 1134 0.0 657
MS.gene59811.t1 MTR_0021s0360 35.796 1137 634 26 69 1143 33 1135 0.0 634
MS.gene59811.t1 MTR_3g037330 35.914 1072 628 22 114 1143 10 1064 0.0 611
MS.gene59811.t1 MTR_2g090610 32.921 1133 656 24 70 1175 3 1058 0.0 562
MS.gene59811.t1 MTR_2g090610 34.929 982 557 20 70 1040 3 913 2.88e-172 533
MS.gene59811.t1 MTR_2g099690 38.305 885 474 20 69 900 40 905 4.53e-172 531
MS.gene59811.t1 MTR_8g018290 35.749 828 455 17 393 1157 14 827 4.25e-156 489
MS.gene59811.t1 MTR_8g018290 35.422 830 462 17 393 1157 14 834 5.01e-155 486
MS.gene59811.t1 MTR_2g099690 36.824 850 465 20 69 865 40 870 3.29e-153 481
MS.gene59811.t1 MTR_8g062150 35.106 564 321 12 70 610 44 585 1.76e-94 315
MS.gene59811.t1 MTR_8g005730 38.596 171 82 4 552 722 16 163 7.33e-25 103
MS.gene59811.t1 MTR_8g005740 31.579 247 86 6 616 837 1 189 3.01e-19 87.4
MS.gene59811.t1 MTR_4g008650 21.910 534 250 18 386 899 389 775 9.44e-17 86.7
MS.gene59811.t1 MTR_4g008650 22.159 528 254 17 387 899 390 775 1.05e-16 86.3
MS.gene59811.t1 MTR_2g056040 55.172 58 26 0 702 759 1 58 4.03e-15 72.0
MS.gene59811.t1 MTR_8g027160 25.143 350 207 10 441 766 352 670 2.04e-11 68.9
MS.gene59811.t1 MTR_8g027160 25.143 350 207 10 441 766 352 670 2.14e-11 68.9
MS.gene59811.t1 MTR_8g027160 25.143 350 207 10 441 766 352 670 3.13e-11 68.2
MS.gene59811.t1 MTR_8g027160 25.143 350 207 10 441 766 352 670 3.36e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59811.t1 AT5G04930 69.490 1157 333 7 21 1176 20 1157 0.0 1698
MS.gene59811.t1 AT3G27870 38.315 1151 619 27 69 1157 37 1158 0.0 713
MS.gene59811.t1 AT1G59820 35.822 1192 677 21 22 1175 11 1152 0.0 713
MS.gene59811.t1 AT3G13900 36.915 1154 640 22 70 1155 41 1174 0.0 695
MS.gene59811.t1 AT1G17500 37.011 1151 640 30 69 1160 40 1164 0.0 690
MS.gene59811.t1 AT1G17500 37.011 1151 640 30 69 1160 40 1164 0.0 690
MS.gene59811.t1 AT3G25610 37.110 1121 641 23 69 1143 39 1141 0.0 689
MS.gene59811.t1 AT1G54280 36.897 1160 634 26 70 1155 41 1176 0.0 687
MS.gene59811.t1 AT1G54280 36.897 1160 634 26 70 1155 41 1176 0.0 687
MS.gene59811.t1 AT1G54280 36.897 1160 634 26 70 1155 41 1176 0.0 687
MS.gene59811.t1 AT1G68710 35.804 1120 660 20 69 1143 41 1146 0.0 686
MS.gene59811.t1 AT1G68710 35.804 1120 660 20 69 1143 41 1146 0.0 686
MS.gene59811.t1 AT1G26130 36.605 1131 632 24 69 1143 41 1142 0.0 684
MS.gene59811.t1 AT1G72700 36.693 1161 645 30 69 1164 40 1175 0.0 683
MS.gene59811.t1 AT1G72700 36.693 1161 645 30 69 1164 40 1175 0.0 683
MS.gene59811.t1 AT1G72700 36.693 1161 645 30 69 1164 40 1175 0.0 683
MS.gene59811.t1 AT1G26130 36.572 1132 632 25 69 1143 41 1143 0.0 681
MS.gene59811.t1 AT1G26130 36.572 1132 632 25 69 1143 41 1143 0.0 681
MS.gene59811.t1 AT1G26130 36.572 1132 632 25 69 1143 41 1143 0.0 681
MS.gene59811.t1 AT1G68710 35.079 1146 659 21 69 1143 41 1172 0.0 675
MS.gene59811.t1 AT1G13210 35.733 1125 654 25 69 1143 37 1142 0.0 659
MS.gene59811.t1 AT3G27870 40.246 974 515 20 69 999 37 986 0.0 658
MS.gene59811.t1 AT3G13900 38.734 932 498 17 70 944 41 956 0.0 595
MS.gene59811.t1 AT3G27870 37.802 992 535 24 223 1157 1 967 0.0 592
MS.gene59811.t1 AT5G44240 33.455 1094 650 18 70 1154 35 1059 0.0 571
MS.gene59811.t1 AT5G44240 33.455 1094 650 18 70 1154 3 1027 0.0 570
MS.gene59811.t1 AT3G13900 36.973 925 503 18 69 940 40 937 4.80e-176 545

Find 236 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATATCAATGAAGATTT+AGG 0.134302 8.3:-54771876 MS.gene59811:CDS
GACTATTTCGATAGTTATTT+TGG 0.183975 8.3:-54769086 MS.gene59811:CDS
AGTTTCAATGCGCTAGTATT+TGG 0.205298 8.3:-54771797 MS.gene59811:CDS
TGTTCCTCTCTTTGCATATT+GGG 0.205345 8.3:-54769146 MS.gene59811:CDS
ATTACCTTATTATAGGAAAT+TGG 0.214718 8.3:-54772114 MS.gene59811:CDS
CTACAGAGTCCTCAGCTTTA+TGG 0.220010 8.3:-54769256 MS.gene59811:CDS
TGAATCGATTACCTTATTAT+AGG 0.220322 8.3:-54772121 MS.gene59811:CDS
GATTTCTCATGCATCCATTT+GGG 0.234204 8.3:-54769023 MS.gene59811:CDS
GAAAAGAATGTCTGTTATAT+TGG 0.236706 8.3:-54770915 MS.gene59811:CDS
GTTTCAATGCGCTAGTATTT+GGG 0.239935 8.3:-54771796 MS.gene59811:CDS
GATATCCTTGTACATTTCTA+TGG 0.241630 8.3:-54771988 MS.gene59811:CDS
AATCTCTCATTTGTTCTATC+AGG 0.248475 8.3:+54772974 None:intergenic
GAGGAAAGTTATCAATATTA+TGG 0.260563 8.3:-54772074 MS.gene59811:CDS
TTGTTCCTCTCTTTGCATAT+TGG 0.261562 8.3:-54769147 MS.gene59811:CDS
TTGACAAGGATCTTAGTAAA+AGG 0.262036 8.3:-54769285 MS.gene59811:CDS
AGAAAATAACCTATGCATAT+TGG 0.269137 8.3:-54770627 MS.gene59811:CDS
GGAAAGCCGGTATTAAAGTA+TGG 0.277372 8.3:-54770544 MS.gene59811:CDS
CTATGCAGGTTCAATGTCTT+GGG 0.277909 8.3:-54770962 MS.gene59811:intron
AATGAGAGATTTGAATTTGC+TGG 0.284143 8.3:-54772962 MS.gene59811:CDS
TCTTTGTGCTAATTCTGTTT+TGG 0.290282 8.3:-54769652 MS.gene59811:intron
AAATCCAATTTCCTATAATA+AGG 0.292418 8.3:+54772110 None:intergenic
TAGCAAGTATTGGGGATCTT+TGG 0.295898 8.3:-54769108 MS.gene59811:CDS
AAAAGAATGTCTGTTATATT+GGG 0.301829 8.3:-54770914 MS.gene59811:CDS
GGATTTCTCATGCATCCATT+TGG 0.302390 8.3:-54769024 MS.gene59811:CDS
TCAACAAGGGAAGTCACTTT+TGG 0.317357 8.3:-54773115 MS.gene59811:CDS
GTCATTTCATTGAGAAGAAA+TGG 0.322837 8.3:-54772670 MS.gene59811:CDS
TACAGAGTCCTCAGCTTTAT+GGG 0.325959 8.3:-54769255 MS.gene59811:CDS
TGAATATCAATGAAGATTTA+GGG 0.327800 8.3:-54771875 MS.gene59811:CDS
CAATAGGTTAGGATTGGTTT+TGG 0.334033 8.3:-54772699 MS.gene59811:CDS
TGGCAAGCACCACATTATTC+TGG 0.338022 8.3:-54768265 MS.gene59811:CDS
GAAAATAACCTATGCATATT+GGG 0.338089 8.3:-54770626 MS.gene59811:CDS
TCGAGAAGTTTGAGAATAGA+AGG 0.341274 8.3:-54768139 MS.gene59811:CDS
GGTTTGAGGACGCTTGTTAT+TGG 0.342303 8.3:-54770761 MS.gene59811:CDS
GTTCAAACTCTTAATCTAGA+TGG 0.343224 8.3:-54772545 MS.gene59811:CDS
TTATTCTGGTTATGTTTGTT+TGG 0.343657 8.3:-54768251 MS.gene59811:CDS
AAACCGAATAGGAATATATA+TGG 0.343990 8.3:-54772431 MS.gene59811:CDS
GATTAAGAATAGCAATTATC+AGG 0.347107 8.3:+54772849 None:intergenic
CTTCAGTTTGCGCTGCTGTT+TGG 0.350525 8.3:-54772166 MS.gene59811:CDS
CATGAAAAGGAGAGGTTTAG+TGG 0.354836 8.3:-54772470 MS.gene59811:CDS
ATAGAAATGTACAAGGATAT+CGG 0.355230 8.3:+54771990 None:intergenic
CTGTAGATATAGCAAGTATT+GGG 0.355510 8.3:-54769117 MS.gene59811:CDS
CCTATGGCGTTGATTATTGA+TGG 0.358296 8.3:-54770308 MS.gene59811:CDS
TACCGTCACTTCATGGTTAC+TGG 0.358328 8.3:-54768955 MS.gene59811:intron
CAGATAAAGTTGAGAACAAT+AGG 0.358646 8.3:-54772715 MS.gene59811:CDS
TCCTCGAATATTGTACTTAG+AGG 0.362052 8.3:-54772362 MS.gene59811:CDS
GTTTGAGGACGCTTGTTATT+GGG 0.362402 8.3:-54770760 MS.gene59811:CDS
AATCCATATATATTCCTATT+CGG 0.362404 8.3:+54772428 None:intergenic
CAACACTAGTGTTATCTTTG+TGG 0.362784 8.3:+54768074 None:intergenic
GTCGTGCAGAAGACGTTTAC+AGG 0.366456 8.3:-54770417 MS.gene59811:CDS
GCTATGCAGGTTCAATGTCT+TGG 0.366620 8.3:-54770963 MS.gene59811:intron
ATTTGAATTTGCTGGGAATT+CGG 0.381074 8.3:-54772954 MS.gene59811:CDS
TGACGAGTAGCCAATTGATA+TGG 0.383546 8.3:+54770493 None:intergenic
TATGTCAACGCTTGTTCATC+TGG 0.387878 8.3:+54771343 None:intergenic
GAGTCCAAACCTGTGAGATA+TGG 0.388556 8.3:-54773085 MS.gene59811:CDS
GATGCTATACCGTCACTTCA+TGG 0.388855 8.3:-54768962 MS.gene59811:CDS
CTTATTCTTCTGTGGGTTTG+AGG 0.389069 8.3:-54770775 MS.gene59811:CDS
TAAATCTTCATTGATATTCA+AGG 0.394762 8.3:+54771878 None:intergenic
TCAATTTAAGTTTCATGAAA+AGG 0.397346 8.3:-54772483 MS.gene59811:CDS
TGGGGTTGGCATCAGTGGTC+AGG 0.401702 8.3:-54769813 MS.gene59811:CDS
CTTCACTCTTATTCTTCTGT+GGG 0.407311 8.3:-54770782 MS.gene59811:CDS
CAAGAAACTGCCATATCAAT+TGG 0.409612 8.3:-54770503 MS.gene59811:CDS
TGATCCATATCTCACAGGTT+TGG 0.410264 8.3:+54773081 None:intergenic
TGATAGTGAACTTGAAGAAC+AGG 0.411514 8.3:-54770264 MS.gene59811:intron
AACTTGCTCATTCTCAAGGC+TGG 0.412722 8.3:+54771749 None:intergenic
CGGAAGCTATTGAGTCTCTA+AGG 0.413263 8.3:-54770565 MS.gene59811:CDS
TCATCATCAAGAAGAAGTTC+TGG 0.413308 8.3:-54773145 MS.gene59811:CDS
CTTAGAGACTCAATAGCTTC+CGG 0.418470 8.3:+54770566 None:intergenic
CAGAAGAATAAGAGTGAAGA+TGG 0.418864 8.3:+54770786 None:intergenic
CACATAATGATTGATATTCA+TGG 0.419762 8.3:-54771274 MS.gene59811:CDS
GGAGCTTGTTCGTGTTGGTC+AGG 0.421237 8.3:-54771967 MS.gene59811:CDS
CATGTCGGTTATAGTTTACC+AGG 0.432869 8.3:-54772021 MS.gene59811:CDS
CAAGTACTTCTATGATTGGT+AGG 0.433645 8.3:-54770682 MS.gene59811:CDS
CAAGCTACAATGGAGGTTGA+TGG 0.433886 8.3:-54772404 MS.gene59811:CDS
CAAGTTGAATACTCTCTTCA+AGG 0.436098 8.3:-54771732 MS.gene59811:intron
TTTGAGAATAGAAGGGTCAA+TGG 0.436649 8.3:-54768131 MS.gene59811:CDS
AGTGGATTTGCAAGCAAAGA+TGG 0.436723 8.3:-54771478 MS.gene59811:CDS
ACATATGCTGCCGCTGCCTA+TGG 0.439035 8.3:-54771325 MS.gene59811:CDS
CAACCCCAACATCAGCCATT+TGG 0.441854 8.3:+54769828 None:intergenic
TGACAATAGCCGATACGTTA+TGG 0.448895 8.3:-54769189 MS.gene59811:CDS
ATTGGGGTGCAATGACAATT+CGG 0.449050 8.3:-54770897 MS.gene59811:CDS
TCTTCACTCTTATTCTTCTG+TGG 0.450704 8.3:-54770783 MS.gene59811:CDS
AAAGTTGAGAACAATAGGTT+AGG 0.450930 8.3:-54772710 MS.gene59811:CDS
ATGCTTCAGAATTTGATCAA+TGG 0.454118 8.3:-54770724 MS.gene59811:CDS
ATTAAAGTATGGGTGTTGAC+TGG 0.454694 8.3:-54770533 MS.gene59811:CDS
TGGATGTAATCAGGTGGACT+TGG 0.459902 8.3:-54769045 MS.gene59811:CDS
TGAAAGATGCATACGAGGAT+TGG 0.460613 8.3:-54772751 MS.gene59811:CDS
CGATGTATCAATGATCCAAA+TGG 0.463472 8.3:-54769843 MS.gene59811:CDS
ACTGTAGATATAGCAAGTAT+TGG 0.463941 8.3:-54769118 MS.gene59811:CDS
CCTGTGAGATATGGATCAAA+GGG 0.466156 8.3:-54773076 MS.gene59811:CDS
GGAGGGTAGGCAAGCTGTAA+TGG 0.466999 8.3:-54769792 MS.gene59811:CDS
ATGAGAGATTTGAATTTGCT+GGG 0.468936 8.3:-54772961 MS.gene59811:CDS
TCAATATAGTTGCCAACCTC+AGG 0.468966 8.3:+54770359 None:intergenic
GTAGCTCCGTTGCAAAAGGC+TGG 0.475516 8.3:-54770108 MS.gene59811:CDS
TGATCCAAATGGCTGATGTT+GGG 0.475834 8.3:-54769832 MS.gene59811:CDS
GTTCCTCTCTTATTTGTACA+TGG 0.476555 8.3:-54769734 MS.gene59811:CDS
GCAGCAAGTACTTCTATGAT+TGG 0.480124 8.3:-54770686 MS.gene59811:CDS
TGAGAACAATAGGTTAGGAT+TGG 0.482905 8.3:-54772705 MS.gene59811:CDS
TGGAGTTGTTTCAACTCCTA+TGG 0.484075 8.3:-54770324 MS.gene59811:CDS
TTGTCTCTCTCGTAAAGAAT+AGG 0.484493 8.3:-54770083 MS.gene59811:CDS
GATGTTGGGGTTGGCATCAG+TGG 0.487356 8.3:-54769818 MS.gene59811:CDS
AGTCCTCAGCTTTATGGGGC+TGG 0.487402 8.3:-54769250 MS.gene59811:CDS
AATTTGCTGGGAATTCGGTT+CGG 0.487604 8.3:-54772949 MS.gene59811:CDS
GCTGGGAATTCGGTTCGGAC+CGG 0.489295 8.3:-54772944 MS.gene59811:CDS
GGTCAATTTGCACTTGGCCA+TGG 0.490285 8.3:-54769065 MS.gene59811:CDS
GACGCTTGTTATTGGGATGC+GGG 0.490460 8.3:-54770753 MS.gene59811:CDS
TTGCAAGCAAAGATGGAAAA+CGG 0.491112 8.3:-54771471 MS.gene59811:CDS
TCCTCTAAGTACAATATTCG+AGG 0.493160 8.3:+54772361 None:intergenic
GAGGTTGGCAACTATATTGA+AGG 0.493833 8.3:-54770356 MS.gene59811:CDS
AAAGTTATCAATATTATGGA+TGG 0.497507 8.3:-54772070 MS.gene59811:CDS
TAGAAATGTACAAGGATATC+GGG 0.498250 8.3:+54771991 None:intergenic
TTACGATTTCTTTCTTGCAC+TGG 0.499106 8.3:-54771446 MS.gene59811:CDS
AAAATGGCAACAACAATAGT+TGG 0.499937 8.3:+54769307 None:intergenic
GTTCCTCTCTTTGCATATTG+GGG 0.500684 8.3:-54769145 MS.gene59811:CDS
AATCTATCAGCTTGACTGTA+GGG 0.500945 8.3:+54771380 None:intergenic
CGAATTCAAGATTTCAGTGT+AGG 0.501122 8.3:-54771902 MS.gene59811:CDS
GGACGCTTGTTATTGGGATG+CGG 0.502399 8.3:-54770754 MS.gene59811:CDS
GGTTGGCATCAGTGGTCAGG+AGG 0.503044 8.3:-54769810 MS.gene59811:CDS
CCCTTTGATCCATATCTCAC+AGG 0.503525 8.3:+54773076 None:intergenic
AGAATCTTTGATCATGAAGT+AGG 0.508208 8.3:+54771944 None:intergenic
CGCAACTTTCATATGTGTCA+TGG 0.509300 8.3:-54768990 MS.gene59811:CDS
AGCTCCTGAGTTGTTGAGCA+TGG 0.510058 8.3:+54772274 None:intergenic
CAACACCCATACTTTAATAC+CGG 0.510191 8.3:+54770538 None:intergenic
TCGAGTAGCTCCGTTGCAAA+AGG 0.511123 8.3:-54770112 MS.gene59811:CDS
ACTTGGCCATGGATGTAATC+AGG 0.511345 8.3:-54769054 MS.gene59811:CDS
TTAAAGTATGGGTGTTGACT+GGG 0.511818 8.3:-54770532 MS.gene59811:CDS
CCGACATGAGGAATGTGAAA+AGG 0.513314 8.3:+54772036 None:intergenic
ATTTCTCATGCATCCATTTG+GGG 0.515709 8.3:-54769022 MS.gene59811:CDS
AACGTAGCTGCGCCTGAGGT+TGG 0.515735 8.3:-54770371 MS.gene59811:CDS
CTTGAAATCTGAATATCGTC+GGG 0.518724 8.3:+54768167 None:intergenic
ACTCAGGAGCTCCGTCTAAG+AGG 0.518971 8.3:-54772262 MS.gene59811:CDS
TATATTGAAGGAAGTTCTGA+TGG 0.519157 8.3:-54770344 MS.gene59811:CDS
ATGCTTATAGAGCGAACCTC+AGG 0.520554 8.3:-54771298 MS.gene59811:CDS
AAAACAAAATCACACGGAAT+CGG 0.522784 8.3:+54772602 None:intergenic
TGACAACAGCTATAAATGAA+TGG 0.524690 8.3:-54769366 MS.gene59811:CDS
TGCATGAATTTGATAGTGAT+CGG 0.526715 8.3:-54770937 MS.gene59811:CDS
TCTTGAAATCTGAATATCGT+CGG 0.531604 8.3:+54768166 None:intergenic
AAATGGAAAGATATTAGAGT+TGG 0.535651 8.3:-54772653 MS.gene59811:CDS
TTAAGTGCGAGAAACCGAAT+AGG 0.537373 8.3:-54772442 MS.gene59811:CDS
TCTATGGAGCTTGTTCGTGT+TGG 0.538618 8.3:-54771972 MS.gene59811:CDS
TAAACTGCAGCAAGGTGTAC+CGG 0.538892 8.3:-54770585 MS.gene59811:CDS
ACCTGTGAGATATGGATCAA+AGG 0.539126 8.3:-54773077 MS.gene59811:CDS
GTCAAGCTGATAGATTATCA+AGG 0.540142 8.3:-54771373 MS.gene59811:CDS
ATTGAATACAGACATAATAC+AGG 0.540454 8.3:-54770819 MS.gene59811:CDS
ATCTTTGAAGAATTCCCAGA+TGG 0.540629 8.3:+54773187 None:intergenic
CACTATCAAGAATATATACA+AGG 0.541563 8.3:+54770279 None:intergenic
AACTGTTCAAACAAATTCCT+AGG 0.542452 8.3:+54772896 None:intergenic
AAGATGCATACGAGGATTGG+AGG 0.543770 8.3:-54772748 MS.gene59811:CDS
AGAAGTACTTGCTGCCTCAA+AGG 0.546382 8.3:+54770694 None:intergenic
GTTGGCATCAGTGGTCAGGA+GGG 0.546555 8.3:-54769809 MS.gene59811:CDS
TAGGGCTGCTTTGCTTCGCA+AGG 0.549839 8.3:-54770663 MS.gene59811:CDS
ATCAAGAATATATACAAGGC+TGG 0.550049 8.3:+54770283 None:intergenic
GTGAGTCTAATTTGAAGACT+AGG 0.551484 8.3:-54772523 MS.gene59811:CDS
AAGTTATCAATATTATGGAT+GGG 0.551657 8.3:-54772069 MS.gene59811:CDS
GAAAGCCGGTATTAAAGTAT+GGG 0.552040 8.3:-54770543 MS.gene59811:CDS
ATTCAACTTGCTCATTCTCA+AGG 0.555225 8.3:+54771745 None:intergenic
GCATCAGTGGTCAGGAGGGT+AGG 0.555914 8.3:-54769805 MS.gene59811:CDS
CACTCTGACTGAGAACAAGA+TGG 0.558857 8.3:-54771820 MS.gene59811:CDS
ATGATCCAAATGGCTGATGT+TGG 0.559216 8.3:-54769833 MS.gene59811:CDS
TCAATATTATGGATGGGGAG+TGG 0.560880 8.3:-54772063 MS.gene59811:CDS
TCTTATTTGTACATGGACAC+TGG 0.565751 8.3:-54769727 MS.gene59811:CDS
TAATCTATCAGCTTGACTGT+AGG 0.565808 8.3:+54771379 None:intergenic
ATGACTCTAGCCATCGGAGA+TGG 0.566585 8.3:-54770051 MS.gene59811:intron
AAGAATACTAATTGTGTGGT+TGG 0.566670 8.3:-54772329 MS.gene59811:CDS
TCAAGCTGATAGATTATCAA+GGG 0.569002 8.3:-54771372 MS.gene59811:CDS
TTACCAACGACTAGGCTACA+TGG 0.572195 8.3:-54769702 MS.gene59811:CDS
TTGCAGGGCTATCTTTGATG+TGG 0.575261 8.3:-54768285 MS.gene59811:intron
TATGCAGGTTCAATGTCTTG+GGG 0.575323 8.3:-54770961 MS.gene59811:intron
GTTGGTGTTGCCGTGTATTG+TGG 0.575445 8.3:-54772311 MS.gene59811:CDS
TTAAGTTTCATGAAAAGGAG+AGG 0.577127 8.3:-54772478 MS.gene59811:CDS
AGTCCACCTGATTACATCCA+TGG 0.578614 8.3:+54769048 None:intergenic
ATTGAGTCTCTAAGGAAAGC+CGG 0.578620 8.3:-54770557 MS.gene59811:CDS
AAATCAGTGATGAAGATGCT+AGG 0.579456 8.3:-54773015 MS.gene59811:CDS
AGTTATCAATATTATGGATG+GGG 0.580201 8.3:-54772068 MS.gene59811:CDS
CTCTATAAGCATAAAACCAT+AGG 0.580922 8.3:+54771309 None:intergenic
TAGCTCCGTTGCAAAAGGCT+GGG 0.582525 8.3:-54770107 MS.gene59811:CDS
TCAAGACGGCTCCTCTTAGA+CGG 0.582988 8.3:+54772251 None:intergenic
TCTTTGAAGAATTCCCAGAT+GGG 0.584144 8.3:+54773188 None:intergenic
CAAATGGCTGATGTTGGGGT+TGG 0.584450 8.3:-54769827 MS.gene59811:CDS
ACAGAGTCCTCAGCTTTATG+GGG 0.585454 8.3:-54769254 MS.gene59811:CDS
GAATTCAAGATTTCAGTGTA+GGG 0.587595 8.3:-54771901 MS.gene59811:CDS
ATATGGATTTCAAGCTACAA+TGG 0.591040 8.3:-54772414 MS.gene59811:CDS
AGTTCATTTGTGTCTCAAGA+CGG 0.592225 8.3:+54772237 None:intergenic
AATGCTTTGCCATAACGTAT+CGG 0.593918 8.3:+54769180 None:intergenic
TATCAGCTTGACTGTAGGGT+CGG 0.595910 8.3:+54771384 None:intergenic
TTTCAATGCGCTAGTATTTG+GGG 0.596349 8.3:-54771795 MS.gene59811:CDS
TTTCTCATGCATCCATTTGG+GGG 0.597711 8.3:-54769021 MS.gene59811:CDS
CGGTAGCGCCCAATATGCAT+AGG 0.597956 8.3:+54770618 None:intergenic
AAAGCCATGCTCAACAACTC+AGG 0.598720 8.3:-54772278 MS.gene59811:CDS
CACTGGAATTACCAACGACT+AGG 0.598882 8.3:-54769710 MS.gene59811:CDS
AAGTACTTCTATGATTGGTA+GGG 0.600513 8.3:-54770681 MS.gene59811:CDS
GATCCAAATGGCTGATGTTG+GGG 0.600913 8.3:-54769831 MS.gene59811:CDS
CGTCTCACGACCACAATACA+CGG 0.601943 8.3:+54772301 None:intergenic
AAAGAATGTCTGTTATATTG+GGG 0.603285 8.3:-54770913 MS.gene59811:CDS
AGGATATCGGGATCATAACC+TGG 0.604549 8.3:+54772003 None:intergenic
AAGCATAAAACCATAGGCAG+CGG 0.609256 8.3:+54771315 None:intergenic
CCATCAATAATCAACGCCAT+AGG 0.614847 8.3:+54770308 None:intergenic
CGAGAAGTTTGAGAATAGAA+GGG 0.615333 8.3:-54768138 MS.gene59811:CDS
GCACCATGTAGCCTAGTCGT+TGG 0.617009 8.3:+54769699 None:intergenic
TCGGATGTGTCAACAACAAG+AGG 0.617316 8.3:+54771403 None:intergenic
CATAAAGCTGAGGACTCTGT+AGG 0.619313 8.3:+54769257 None:intergenic
ACAAGAAGAACAAAAGCCAA+TGG 0.621288 8.3:+54772782 None:intergenic
AAGCTCCATAGAAATGTACA+AGG 0.624504 8.3:+54771983 None:intergenic
TTTGGTCTCAGTGAATGGAA+AGG 0.626806 8.3:-54771557 MS.gene59811:intron
AGAAGAATAAGAGTGAAGAT+GGG 0.633351 8.3:+54770787 None:intergenic
TCGTCAAAGCTACTAACAAG+CGG 0.635770 8.3:-54770476 MS.gene59811:CDS
GATGGAAAGAGATTGTCACT+TGG 0.637955 8.3:-54772386 MS.gene59811:CDS
CTTCCCCAATATGCAAAGAG+AGG 0.638044 8.3:+54769142 None:intergenic
ATCAATCATTATGTGACCTG+AGG 0.639691 8.3:+54771282 None:intergenic
CTCTCTCGTAAAGAATAGGA+CGG 0.640401 8.3:-54770079 MS.gene59811:CDS
TGCTGTGAAAGATGCATACG+AGG 0.643214 8.3:-54772756 MS.gene59811:CDS
CTGCAGTTTATCTTCAATAG+CGG 0.645080 8.3:+54770598 None:intergenic
AGATACCATACCATCTCCGA+TGG 0.645447 8.3:+54770041 None:intergenic
AGATTCTAGATTGTATGATG+AGG 0.647520 8.3:-54771928 MS.gene59811:CDS
TACCAGTAACCATGAAGTGA+CGG 0.649664 8.3:+54768953 None:intergenic
TGAACATAAGCAACACCGGT+AGG 0.652658 8.3:+54772563 None:intergenic
CAAACATAACCAGAATAATG+TGG 0.654557 8.3:+54768256 None:intergenic
TGTAGATATAGCAAGTATTG+GGG 0.656699 8.3:-54769116 MS.gene59811:CDS
TGTCCATGTACAAATAAGAG+AGG 0.657328 8.3:+54769731 None:intergenic
TGGATTTCAAGCTACAATGG+AGG 0.657601 8.3:-54772411 MS.gene59811:CDS
GCTGACATGACTCTAGCCAT+CGG 0.659064 8.3:-54770057 MS.gene59811:CDS
TGGCCATGGATGTAATCAGG+TGG 0.664998 8.3:-54769051 MS.gene59811:CDS
TTGTCGACGAGTGATCCTAC+CGG 0.666383 8.3:-54772578 MS.gene59811:CDS
TGTCCAGCCCCATAAAGCTG+AGG 0.666629 8.3:+54769247 None:intergenic
TTCTGGTAGAAATTCAACAA+GGG 0.668455 8.3:-54773128 MS.gene59811:CDS
TAAAGTATGGGTGTTGACTG+GGG 0.668570 8.3:-54770531 MS.gene59811:CDS
TACTCGACAACAAAGAACAA+CGG 0.673269 8.3:+54770128 None:intergenic
ACTTAAGAATACTAATTGTG+TGG 0.675064 8.3:-54772333 MS.gene59811:CDS
GTTCTGGTAGAAATTCAACA+AGG 0.677278 8.3:-54773129 MS.gene59811:CDS
AGTTTGAACATAAGCAACAC+CGG 0.682795 8.3:+54772559 None:intergenic
TGGGGCTGGACAAAGACAAG+AGG 0.684412 8.3:-54769236 MS.gene59811:CDS
ATTGAAGATAAACTGCAGCA+AGG 0.685229 8.3:-54770593 MS.gene59811:CDS
CAAGCTGATAGATTATCAAG+GGG 0.688461 8.3:-54771371 MS.gene59811:CDS
GGTAAACTATAACCGACATG+AGG 0.690892 8.3:+54772024 None:intergenic
ATATTCATGGAGAACAACAA+AGG 0.691556 8.3:-54771261 MS.gene59811:intron
ATAAACTTTACAACAAAACG+TGG 0.694069 8.3:+54768206 None:intergenic
GACAACAAAACAAAATCACA+CGG 0.718604 8.3:+54772596 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCAAAAAAAAAAATTCAA+GGG + chr8.3:54770242-54770261 None:intergenic 10.0%
!! TATTCAAAAAAAAAAATTCA+AGG + chr8.3:54770243-54770262 None:intergenic 10.0%
!!! CATTTTATTATGTTTTAAAA+TGG - chr8.3:54772493-54772512 MS.gene59811:CDS 10.0%
!! AAAAGAATGTCTGTTATATT+GGG - chr8.3:54770373-54770392 MS.gene59811:CDS 20.0%
!! AAAGTTATCAATATTATGGA+TGG - chr8.3:54769217-54769236 MS.gene59811:CDS 20.0%
!! AAATCCAATTTCCTATAATA+AGG + chr8.3:54769180-54769199 None:intergenic 20.0%
!! AAGTTATCAATATTATGGAT+GGG - chr8.3:54769218-54769237 MS.gene59811:CDS 20.0%
!! AATCCATATATATTCCTATT+CGG + chr8.3:54768862-54768881 None:intergenic 20.0%
!! ATTACCTTATTATAGGAAAT+TGG - chr8.3:54769173-54769192 MS.gene59811:CDS 20.0%
!! GAAAATGGAAAAGAAATAAA+AGG - chr8.3:54771332-54771351 MS.gene59811:CDS 20.0%
!! TAAATCTTCATTGATATTCA+AGG + chr8.3:54769412-54769431 None:intergenic 20.0%
!! TGAATATCAATGAAGATTTA+GGG - chr8.3:54769412-54769431 MS.gene59811:intron 20.0%
!! TTGAATATCAATGAAGATTT+AGG - chr8.3:54769411-54769430 MS.gene59811:intron 20.0%
!!! AGTTATAAAAGAGTATTTTC+CGG + chr8.3:54768365-54768384 None:intergenic 20.0%
!!! CATATTTTTGTGTTGTTATT+TGG - chr8.3:54769712-54769731 MS.gene59811:CDS 20.0%
!!! TCAATTTAAGTTTCATGAAA+AGG - chr8.3:54768804-54768823 MS.gene59811:intron 20.0%
! AAACCGAATAGGAATATATA+TGG - chr8.3:54768856-54768875 MS.gene59811:intron 25.0%
! AAAGAATGTCTGTTATATTG+GGG - chr8.3:54770374-54770393 MS.gene59811:CDS 25.0%
! AAATACAAGGATAGAGAAAA+TGG - chr8.3:54771317-54771336 MS.gene59811:CDS 25.0%
! AAATGGAAAGATATTAGAGT+TGG - chr8.3:54768634-54768653 MS.gene59811:intron 25.0%
! AACATAAAAATGTCTGTTTG+GGG + chr8.3:54770095-54770114 None:intergenic 25.0%
! AATAATGAGAACGAAATACA+AGG - chr8.3:54771304-54771323 MS.gene59811:CDS 25.0%
! ACTTAAGAATACTAATTGTG+TGG - chr8.3:54768954-54768973 MS.gene59811:intron 25.0%
! AGAAAATAACCTATGCATAT+TGG - chr8.3:54770660-54770679 MS.gene59811:CDS 25.0%
! AGGCACATATAGAAATAAAT+TGG + chr8.3:54771744-54771763 None:intergenic 25.0%
! AGTTATCAATATTATGGATG+GGG - chr8.3:54769219-54769238 MS.gene59811:CDS 25.0%
! ATAAACTTTACAACAAAACG+TGG + chr8.3:54773084-54773103 None:intergenic 25.0%
! ATAGAAATGTACAAGGATAT+CGG + chr8.3:54769300-54769319 None:intergenic 25.0%
! ATTGAATACAGACATAATAC+AGG - chr8.3:54770468-54770487 MS.gene59811:CDS 25.0%
! ATTTCGTTCTCATTATTTGA+AGG + chr8.3:54771301-54771320 None:intergenic 25.0%
! CAACATAAAAATGTCTGTTT+GGG + chr8.3:54770096-54770115 None:intergenic 25.0%
! CACATAATGATTGATATTCA+TGG - chr8.3:54770013-54770032 MS.gene59811:intron 25.0%
! CACTATCAAGAATATATACA+AGG + chr8.3:54771011-54771030 None:intergenic 25.0%
! CATAAAAAAAGGACTACTTT+GGG + chr8.3:54770288-54770307 None:intergenic 25.0%
! GAAAAGAATGTCTGTTATAT+TGG - chr8.3:54770372-54770391 MS.gene59811:CDS 25.0%
! GAAAATAACCTATGCATATT+GGG - chr8.3:54770661-54770680 MS.gene59811:CDS 25.0%
! GAGGAAAGTTATCAATATTA+TGG - chr8.3:54769213-54769232 MS.gene59811:CDS 25.0%
! GATTAAGAATAGCAATTATC+AGG + chr8.3:54768441-54768460 None:intergenic 25.0%
! TCAACATAAAAATGTCTGTT+TGG + chr8.3:54770097-54770116 None:intergenic 25.0%
! TCATAAAAAAAGGACTACTT+TGG + chr8.3:54770289-54770308 None:intergenic 25.0%
! TGAATCGATTACCTTATTAT+AGG - chr8.3:54769166-54769185 MS.gene59811:CDS 25.0%
! TTTCGTTCTCATTATTTGAA+GGG + chr8.3:54771300-54771319 None:intergenic 25.0%
!! CCTACAACAAAAAATTGTTT+TGG - chr8.3:54772074-54772093 MS.gene59811:CDS 25.0%
!! CTTTTATAACTTTTCTTCCT+AGG - chr8.3:54768374-54768393 MS.gene59811:intron 25.0%
!! GACTATTTCGATAGTTATTT+TGG - chr8.3:54772201-54772220 MS.gene59811:CDS 25.0%
!! TTATTCTGGTTATGTTTGTT+TGG - chr8.3:54773036-54773055 MS.gene59811:CDS 25.0%
!! TTGATTTTGCAATCCATAAA+GGG + chr8.3:54772669-54772688 None:intergenic 25.0%
!! TTTATGAATGCTCTCATTTT+GGG - chr8.3:54770302-54770321 MS.gene59811:CDS 25.0%
!! TTTTATGAATGCTCTCATTT+TGG - chr8.3:54770301-54770320 MS.gene59811:CDS 25.0%
!!! AGGAAATTGGATTTTTCAAA+GGG - chr8.3:54769186-54769205 MS.gene59811:CDS 25.0%
!!! ATGAGAGCATTCATAAAAAA+AGG + chr8.3:54770299-54770318 None:intergenic 25.0%
!!! ATTGATTTTGCAATCCATAA+AGG + chr8.3:54772670-54772689 None:intergenic 25.0%
!!! CCAAAACAATTTTTTGTTGT+AGG + chr8.3:54772077-54772096 None:intergenic 25.0%
!!! TAGGAAATTGGATTTTTCAA+AGG - chr8.3:54769185-54769204 MS.gene59811:CDS 25.0%
!!! TTAGAATGATTTGCTGTTAA+TGG - chr8.3:54770128-54770147 MS.gene59811:CDS 25.0%
AAAACAAAATCACACGGAAT+CGG + chr8.3:54768688-54768707 None:intergenic 30.0%
AAAATGGCAACAACAATAGT+TGG + chr8.3:54771983-54772002 None:intergenic 30.0%
AAAGTTGAGAACAATAGGTT+AGG - chr8.3:54768577-54768596 MS.gene59811:intron 30.0%
AACTGTTCAAACAAATTCCT+AGG + chr8.3:54768394-54768413 None:intergenic 30.0%
AAGAATACTAATTGTGTGGT+TGG - chr8.3:54768958-54768977 MS.gene59811:CDS 30.0%
AAGTACTTCTATGATTGGTA+GGG - chr8.3:54770606-54770625 MS.gene59811:CDS 30.0%
AATAAGTCTATGTTGGATAG+TGG - chr8.3:54772697-54772716 MS.gene59811:CDS 30.0%
AATCTCTCATTTGTTCTATC+AGG + chr8.3:54768316-54768335 None:intergenic 30.0%
AATGAGAGATTTGAATTTGC+TGG - chr8.3:54768325-54768344 MS.gene59811:intron 30.0%
ACTAAGATCCTTGTCAAAAA+TGG + chr8.3:54771999-54772018 None:intergenic 30.0%
ACTGTAGATATAGCAAGTAT+TGG - chr8.3:54772169-54772188 MS.gene59811:CDS 30.0%
AGAAGAATAAGAGTGAAGAT+GGG + chr8.3:54770503-54770522 None:intergenic 30.0%
AGAATCTTTGATCATGAAGT+AGG + chr8.3:54769346-54769365 None:intergenic 30.0%
AGATTCTAGATTGTATGATG+AGG - chr8.3:54769359-54769378 MS.gene59811:CDS 30.0%
ATATGGATTTCAAGCTACAA+TGG - chr8.3:54768873-54768892 MS.gene59811:intron 30.0%
ATATTCATGGAGAACAACAA+AGG - chr8.3:54770026-54770045 MS.gene59811:intron 30.0%
ATCAAGAATATATACAAGGC+TGG + chr8.3:54771007-54771026 None:intergenic 30.0%
ATCTTACAAGTCAACTTTGT+AGG - chr8.3:54772759-54772778 MS.gene59811:CDS 30.0%
ATGCTTCAGAATTTGATCAA+TGG - chr8.3:54770563-54770582 MS.gene59811:CDS 30.0%
CAAACATAACCAGAATAATG+TGG + chr8.3:54773034-54773053 None:intergenic 30.0%
CAGATAAAGTTGAGAACAAT+AGG - chr8.3:54768572-54768591 MS.gene59811:intron 30.0%
CCAACATAGACTTATTTAAG+AGG + chr8.3:54772693-54772712 None:intergenic 30.0%
CCTCTTAAATAAGTCTATGT+TGG - chr8.3:54772690-54772709 MS.gene59811:CDS 30.0%
CTCTATAAGCATAAAACCAT+AGG + chr8.3:54769981-54770000 None:intergenic 30.0%
CTGTAGATATAGCAAGTATT+GGG - chr8.3:54772170-54772189 MS.gene59811:CDS 30.0%
CTTTCTCCTTCATATGTTAT+AGG - chr8.3:54771415-54771434 MS.gene59811:CDS 30.0%
GAATTCAAGATTTCAGTGTA+GGG - chr8.3:54769386-54769405 MS.gene59811:CDS 30.0%
GACAACAAAACAAAATCACA+CGG + chr8.3:54768694-54768713 None:intergenic 30.0%
GATATCCTTGTACATTTCTA+TGG - chr8.3:54769299-54769318 MS.gene59811:CDS 30.0%
GTCATTTCATTGAGAAGAAA+TGG - chr8.3:54768617-54768636 MS.gene59811:intron 30.0%
GTTCAAACTCTTAATCTAGA+TGG - chr8.3:54768742-54768761 MS.gene59811:intron 30.0%
TAGAAATGTACAAGGATATC+GGG + chr8.3:54769299-54769318 None:intergenic 30.0%
TCAAGCTGATAGATTATCAA+GGG - chr8.3:54769915-54769934 MS.gene59811:intron 30.0%
TCTTACAAGTCAACTTTGTA+GGG - chr8.3:54772760-54772779 MS.gene59811:CDS 30.0%
TCTTGAAATCTGAATATCGT+CGG + chr8.3:54773124-54773143 None:intergenic 30.0%
TGACAACAGCTATAAATGAA+TGG - chr8.3:54771921-54771940 MS.gene59811:CDS 30.0%
TTAAGTTTCATGAAAAGGAG+AGG - chr8.3:54768809-54768828 MS.gene59811:intron 30.0%
TTAGCACCTATAACATATGA+AGG + chr8.3:54771424-54771443 None:intergenic 30.0%
TTCCAAATGTTCAATCCTAT+AGG - chr8.3:54772857-54772876 MS.gene59811:CDS 30.0%
TTCTGGTAGAAATTCAACAA+GGG - chr8.3:54768159-54768178 MS.gene59811:CDS 30.0%
TTGACAAGGATCTTAGTAAA+AGG - chr8.3:54772002-54772021 MS.gene59811:CDS 30.0%
! ATGAGAGATTTGAATTTGCT+GGG - chr8.3:54768326-54768345 MS.gene59811:intron 30.0%
! GGAAAAGAAATAAAAGGCAT+CGG - chr8.3:54771338-54771357 MS.gene59811:CDS 30.0%
! TATATTGAAGGAAGTTCTGA+TGG - chr8.3:54770943-54770962 MS.gene59811:CDS 30.0%
! TATGTCTTTTCAGACAAAAC+TGG - chr8.3:54769444-54769463 MS.gene59811:intron 30.0%
! TCTTTGTGCTAATTCTGTTT+TGG - chr8.3:54771635-54771654 MS.gene59811:intron 30.0%
! TGATTTTGCAATCCATAAAG+GGG + chr8.3:54772668-54772687 None:intergenic 30.0%
! TGTAGATATAGCAAGTATTG+GGG - chr8.3:54772171-54772190 MS.gene59811:CDS 30.0%
! TTAACTTTCACCCTCATTTT+TGG + chr8.3:54769764-54769783 None:intergenic 30.0%
!! ATTTGAATTTGCTGGGAATT+CGG - chr8.3:54768333-54768352 MS.gene59811:intron 30.0%
!! CAAAGTTGACTTGTAAGATA+AGG + chr8.3:54772758-54772777 None:intergenic 30.0%
!! TGCATGAATTTGATAGTGAT+CGG - chr8.3:54770350-54770369 MS.gene59811:CDS 30.0%
!! TGTTTCTATCCTAGTCTTAT+TGG - chr8.3:54772819-54772838 MS.gene59811:CDS 30.0%
!!! TATTTTGGTCAATTTGCACT+TGG - chr8.3:54772216-54772235 MS.gene59811:CDS 30.0%
!!! TTAGGATTGGTTTTGGTTAA+TGG - chr8.3:54768595-54768614 MS.gene59811:intron 30.0%
AAATCAGTGATGAAGATGCT+AGG - chr8.3:54768272-54768291 MS.gene59811:CDS 35.0%
AAGCTCCATAGAAATGTACA+AGG + chr8.3:54769307-54769326 None:intergenic 35.0%
AATCTATCAGCTTGACTGTA+GGG + chr8.3:54769910-54769929 None:intergenic 35.0%
AATGCTTTGCCATAACGTAT+CGG + chr8.3:54772110-54772129 None:intergenic 35.0%
ACAAGAAGAACAAAAGCCAA+TGG + chr8.3:54768508-54768527 None:intergenic 35.0%
ACATGTGTACAAAACTTTGC+AGG - chr8.3:54772986-54773005 MS.gene59811:CDS 35.0%
ACTATTTAAGCCATCCAATG+TGG + chr8.3:54772907-54772926 None:intergenic 35.0%
AGCCTATAGGATTGAACATT+TGG + chr8.3:54772862-54772881 None:intergenic 35.0%
AGTTCATTTGTGTCTCAAGA+CGG + chr8.3:54769053-54769072 None:intergenic 35.0%
AGTTTCAATGCGCTAGTATT+TGG - chr8.3:54769490-54769509 MS.gene59811:intron 35.0%
AGTTTGAACATAAGCAACAC+CGG + chr8.3:54768731-54768750 None:intergenic 35.0%
ATCAATCATTATGTGACCTG+AGG + chr8.3:54770008-54770027 None:intergenic 35.0%
ATGGATACAAAAAACCCATC+TGG - chr8.3:54768085-54768104 MS.gene59811:CDS 35.0%
ATTGAAGATAAACTGCAGCA+AGG - chr8.3:54770694-54770713 MS.gene59811:CDS 35.0%
ATTTCTCATGCATCCATTTG+GGG - chr8.3:54772265-54772284 MS.gene59811:CDS 35.0%
CAACACCCATACTTTAATAC+CGG + chr8.3:54770752-54770771 None:intergenic 35.0%
CAAGAAACTGCCATATCAAT+TGG - chr8.3:54770784-54770803 MS.gene59811:CDS 35.0%
CAAGCTGATAGATTATCAAG+GGG - chr8.3:54769916-54769935 MS.gene59811:intron 35.0%
CAAGTACTTCTATGATTGGT+AGG - chr8.3:54770605-54770624 MS.gene59811:CDS 35.0%
CAGAAGAATAAGAGTGAAGA+TGG + chr8.3:54770504-54770523 None:intergenic 35.0%
CATGTGTACAAAACTTTGCA+GGG - chr8.3:54772987-54773006 MS.gene59811:CDS 35.0%
CGAATTCAAGATTTCAGTGT+AGG - chr8.3:54769385-54769404 MS.gene59811:CDS 35.0%
CGAGAAGTTTGAGAATAGAA+GGG - chr8.3:54773149-54773168 MS.gene59811:CDS 35.0%
CGATGTATCAATGATCCAAA+TGG - chr8.3:54771444-54771463 MS.gene59811:CDS 35.0%
CTGCAGTTTATCTTCAATAG+CGG + chr8.3:54770692-54770711 None:intergenic 35.0%
CTTATGCGATTAGCAAAAAG+TGG - chr8.3:54769791-54769810 MS.gene59811:CDS 35.0%
CTTCACTCTTATTCTTCTGT+GGG - chr8.3:54770505-54770524 MS.gene59811:CDS 35.0%
CTTGAAATCTGAATATCGTC+GGG + chr8.3:54773123-54773142 None:intergenic 35.0%
GAAAGCCGGTATTAAAGTAT+GGG - chr8.3:54770744-54770763 MS.gene59811:CDS 35.0%
GATTTCTCATGCATCCATTT+GGG - chr8.3:54772264-54772283 MS.gene59811:CDS 35.0%
GTCAAGCTGATAGATTATCA+AGG - chr8.3:54769914-54769933 MS.gene59811:intron 35.0%
GTGAGTCTAATTTGAAGACT+AGG - chr8.3:54768764-54768783 MS.gene59811:intron 35.0%
GTTCTGGTAGAAATTCAACA+AGG - chr8.3:54768158-54768177 MS.gene59811:CDS 35.0%
GTTTCAATGCGCTAGTATTT+GGG - chr8.3:54769491-54769510 MS.gene59811:intron 35.0%
TAAAGCAGTTGAAGGAGTTA+AGG + chr8.3:54770218-54770237 None:intergenic 35.0%
TAATCTATCAGCTTGACTGT+AGG + chr8.3:54769911-54769930 None:intergenic 35.0%
TACTCGACAACAAAGAACAA+CGG + chr8.3:54771162-54771181 None:intergenic 35.0%
TCATCATCAAGAAGAAGTTC+TGG - chr8.3:54768142-54768161 MS.gene59811:CDS 35.0%
TCCTCGAATATTGTACTTAG+AGG - chr8.3:54768925-54768944 MS.gene59811:intron 35.0%
TCCTCTAAGTACAATATTCG+AGG + chr8.3:54768929-54768948 None:intergenic 35.0%
TCGAGAAGTTTGAGAATAGA+AGG - chr8.3:54773148-54773167 MS.gene59811:CDS 35.0%
TCTTCACTCTTATTCTTCTG+TGG - chr8.3:54770504-54770523 MS.gene59811:CDS 35.0%
TGAGAACAATAGGTTAGGAT+TGG - chr8.3:54768582-54768601 MS.gene59811:intron 35.0%
TGGATACAAAAAACCCATCT+GGG - chr8.3:54768086-54768105 MS.gene59811:CDS 35.0%
TGTCCATGTACAAATAAGAG+AGG + chr8.3:54771559-54771578 None:intergenic 35.0%
TGTTCCTCTCTTTGCATATT+GGG - chr8.3:54772141-54772160 MS.gene59811:CDS 35.0%
TTACGATTTCTTTCTTGCAC+TGG - chr8.3:54769841-54769860 MS.gene59811:CDS 35.0%
TTGCAAGCAAAGATGGAAAA+CGG - chr8.3:54769816-54769835 MS.gene59811:CDS 35.0%
TTGTCTCTCTCGTAAAGAAT+AGG - chr8.3:54771204-54771223 MS.gene59811:intron 35.0%
TTGTTCCTCTCTTTGCATAT+TGG - chr8.3:54772140-54772159 MS.gene59811:CDS 35.0%
TTTCAATGCGCTAGTATTTG+GGG - chr8.3:54769492-54769511 MS.gene59811:intron 35.0%
TTTGAGAATAGAAGGGTCAA+TGG - chr8.3:54773156-54773175 MS.gene59811:CDS 35.0%
! AATGGCTTCAGATTTTGCAA+TGG - chr8.3:54771513-54771532 MS.gene59811:CDS 35.0%
! AGGTGTTTCAATTTTGCCAT+TGG - chr8.3:54768489-54768508 MS.gene59811:intron 35.0%
! ATCTTTGAAGAATTCCCAGA+TGG + chr8.3:54768103-54768122 None:intergenic 35.0%
! ATGGCTTCAGATTTTGCAAT+GGG - chr8.3:54771514-54771533 MS.gene59811:CDS 35.0%
! ATTCAACTTGCTCATTCTCA+AGG + chr8.3:54769545-54769564 None:intergenic 35.0%
! CAAGTTGAATACTCTCTTCA+AGG - chr8.3:54769555-54769574 MS.gene59811:intron 35.0%
! GTTCCTCTCTTATTTGTACA+TGG - chr8.3:54771553-54771572 MS.gene59811:intron 35.0%
! TAAGCTTTAGCCCTTGAATT+AGG - chr8.3:54770261-54770280 MS.gene59811:intron 35.0%
! TCTTATTTGTACATGGACAC+TGG - chr8.3:54771560-54771579 MS.gene59811:intron 35.0%
! TCTTTGAAGAATTCCCAGAT+GGG + chr8.3:54768102-54768121 None:intergenic 35.0%
! TGATAGTGAACTTGAAGAAC+AGG - chr8.3:54771023-54771042 MS.gene59811:intron 35.0%
! TGTTATTTGGTCTCAGTGAA+TGG - chr8.3:54769725-54769744 MS.gene59811:CDS 35.0%
!! ATTAAAGTATGGGTGTTGAC+TGG - chr8.3:54770754-54770773 MS.gene59811:CDS 35.0%
!! GGATTTTTCAAAGGGAAAAG+AGG - chr8.3:54769194-54769213 MS.gene59811:CDS 35.0%
!! TACTTTGGGACCTAATTCAA+GGG + chr8.3:54770274-54770293 None:intergenic 35.0%
!! TTAAAGTATGGGTGTTGACT+GGG - chr8.3:54770755-54770774 MS.gene59811:CDS 35.0%
!! TTACCTCAACTAGCTGTTTT+TGG - chr8.3:54768463-54768482 MS.gene59811:intron 35.0%
!!! CAATAGGTTAGGATTGGTTT+TGG - chr8.3:54768588-54768607 MS.gene59811:intron 35.0%
!!! TGTTGTTGCCATTTTTGACA+AGG - chr8.3:54771988-54772007 MS.gene59811:CDS 35.0%
!!! TTTGTGGCTTTTAAGATGCA+TGG - chr8.3:54771823-54771842 MS.gene59811:CDS 35.0%
AAGCATAAAACCATAGGCAG+CGG + chr8.3:54769975-54769994 None:intergenic 40.0%
ACCTGTGAGATATGGATCAA+AGG - chr8.3:54768210-54768229 MS.gene59811:CDS 40.0%
AGGTCTTGAAGCCAAAAATG+AGG - chr8.3:54769750-54769769 MS.gene59811:CDS 40.0%
ATGATCCAAATGGCTGATGT+TGG - chr8.3:54771454-54771473 MS.gene59811:CDS 40.0%
ATTGGGGTGCAATGACAATT+CGG - chr8.3:54770390-54770409 MS.gene59811:CDS 40.0%
CAATCCTATAGGCTTGAGAA+GGG - chr8.3:54772868-54772887 MS.gene59811:CDS 40.0%
CATGAAAAGGAGAGGTTTAG+TGG - chr8.3:54768817-54768836 MS.gene59811:intron 40.0%
CCATCAATAATCAACGCCAT+AGG + chr8.3:54770982-54771001 None:intergenic 40.0%
CCTGTGAGATATGGATCAAA+GGG - chr8.3:54768211-54768230 MS.gene59811:CDS 40.0%
CGCAACTTTCATATGTGTCA+TGG - chr8.3:54772297-54772316 MS.gene59811:CDS 40.0%
CTACCAAAAACAGCTAGTTG+AGG + chr8.3:54768469-54768488 None:intergenic 40.0%
CTATGCAGGTTCAATGTCTT+GGG - chr8.3:54770325-54770344 MS.gene59811:CDS 40.0%
CTCTCTCGTAAAGAATAGGA+CGG - chr8.3:54771208-54771227 MS.gene59811:intron 40.0%
CTTAGAGACTCAATAGCTTC+CGG + chr8.3:54770724-54770743 None:intergenic 40.0%
CTTATTCTTCTGTGGGTTTG+AGG - chr8.3:54770512-54770531 MS.gene59811:CDS 40.0%
GAGGTTGGCAACTATATTGA+AGG - chr8.3:54770931-54770950 MS.gene59811:CDS 40.0%
GATGGAAAGAGATTGTCACT+TGG - chr8.3:54768901-54768920 MS.gene59811:intron 40.0%
GCAGCAAGTACTTCTATGAT+TGG - chr8.3:54770601-54770620 MS.gene59811:CDS 40.0%
GCATGCATGACATGACTAAT+TGG + chr8.3:54772433-54772452 None:intergenic 40.0%
GGAAAGCCGGTATTAAAGTA+TGG - chr8.3:54770743-54770762 MS.gene59811:CDS 40.0%
GGATTTCTCATGCATCCATT+TGG - chr8.3:54772263-54772282 MS.gene59811:CDS 40.0%
GGTAAACTATAACCGACATG+AGG + chr8.3:54769266-54769285 None:intergenic 40.0%
GGTCTTGAAGCCAAAAATGA+GGG - chr8.3:54769751-54769770 MS.gene59811:CDS 40.0%
GTTCCTCTCTTTGCATATTG+GGG - chr8.3:54772142-54772161 MS.gene59811:CDS 40.0%
TACCAGTAACCATGAAGTGA+CGG + chr8.3:54772337-54772356 None:intergenic 40.0%
TATGCAGGTTCAATGTCTTG+GGG - chr8.3:54770326-54770345 MS.gene59811:CDS 40.0%
TATGTCAACGCTTGTTCATC+TGG + chr8.3:54769947-54769966 None:intergenic 40.0%
TCAATATAGTTGCCAACCTC+AGG + chr8.3:54770931-54770950 None:intergenic 40.0%
TCAATATTATGGATGGGGAG+TGG - chr8.3:54769224-54769243 MS.gene59811:CDS 40.0%
TCAATCCTATAGGCTTGAGA+AGG - chr8.3:54772867-54772886 MS.gene59811:CDS 40.0%
TCGTCAAAGCTACTAACAAG+CGG - chr8.3:54770811-54770830 MS.gene59811:CDS 40.0%
TGAAAGATGCATACGAGGAT+TGG - chr8.3:54768536-54768555 MS.gene59811:intron 40.0%
TGACAATAGCCGATACGTTA+TGG - chr8.3:54772098-54772117 MS.gene59811:CDS 40.0%
TGACGAGTAGCCAATTGATA+TGG + chr8.3:54770797-54770816 None:intergenic 40.0%
TGATCCAAATGGCTGATGTT+GGG - chr8.3:54771455-54771474 MS.gene59811:CDS 40.0%
TGATCCATATCTCACAGGTT+TGG + chr8.3:54768209-54768228 None:intergenic 40.0%
TGGATTTCAAGCTACAATGG+AGG - chr8.3:54768876-54768895 MS.gene59811:intron 40.0%
TGTGTGGAGAAAACTCTGTT+GGG - chr8.3:54772603-54772622 MS.gene59811:CDS 40.0%
TTAAAAGCCACAAAGAGCGA+TGG + chr8.3:54771817-54771836 None:intergenic 40.0%
TTAAGTGCGAGAAACCGAAT+AGG - chr8.3:54768845-54768864 MS.gene59811:intron 40.0%
TTCAATTCCTAACTCGTGTG+TGG - chr8.3:54772587-54772606 MS.gene59811:CDS 40.0%
TTTCTCATGCATCCATTTGG+GGG - chr8.3:54772266-54772285 MS.gene59811:CDS 40.0%
TTTGGTCTCAGTGAATGGAA+AGG - chr8.3:54769730-54769749 MS.gene59811:CDS 40.0%
! AGTGGATTTGCAAGCAAAGA+TGG - chr8.3:54769809-54769828 MS.gene59811:CDS 40.0%
! ATGTGCTGATAGATCTCAGA+TGG - chr8.3:54771047-54771066 MS.gene59811:intron 40.0%
! ATTGAGTCTCTAAGGAAAGC+CGG - chr8.3:54770730-54770749 MS.gene59811:CDS 40.0%
! ATTTTGCAATGGGGCAGTTT+CGG - chr8.3:54771524-54771543 MS.gene59811:CDS 40.0%
! CATGTCGGTTATAGTTTACC+AGG - chr8.3:54769266-54769285 MS.gene59811:CDS 40.0%
! CCTTTTCACATTCCTCATGT+CGG - chr8.3:54769251-54769270 MS.gene59811:CDS 40.0%
! CGGTGAAACTTTTCGTCAAA+GGG - chr8.3:54770410-54770429 MS.gene59811:CDS 40.0%
! GAACATTTGGAACATGACCT+AGG + chr8.3:54772849-54772868 None:intergenic 40.0%
! GGTGAAACTTTTCGTCAAAG+GGG - chr8.3:54770411-54770430 MS.gene59811:CDS 40.0%
! TACAGAGTCCTCAGCTTTAT+GGG - chr8.3:54772032-54772051 MS.gene59811:CDS 40.0%
! TCAATGGCATTTTGCCTTTG+AGG - chr8.3:54770579-54770598 MS.gene59811:CDS 40.0%
! TCGGTGAAACTTTTCGTCAA+AGG - chr8.3:54770409-54770428 MS.gene59811:CDS 40.0%
! TGGAGTTGTTTCAACTCCTA+TGG - chr8.3:54770963-54770982 MS.gene59811:intron 40.0%
! TGGCTTCAGATTTTGCAATG+GGG - chr8.3:54771515-54771534 MS.gene59811:CDS 40.0%
!! AATTTGCTGGGAATTCGGTT+CGG - chr8.3:54768338-54768357 MS.gene59811:intron 40.0%
!! CCTATGGCGTTGATTATTGA+TGG - chr8.3:54770979-54770998 MS.gene59811:intron 40.0%
!! CTACTTTGGGACCTAATTCA+AGG + chr8.3:54770275-54770294 None:intergenic 40.0%
!! GTTTGAGGACGCTTGTTATT+GGG - chr8.3:54770527-54770546 MS.gene59811:CDS 40.0%
!! TAAAGTATGGGTGTTGACTG+GGG - chr8.3:54770756-54770775 MS.gene59811:CDS 40.0%
!! TAGCAAGTATTGGGGATCTT+TGG - chr8.3:54772179-54772198 MS.gene59811:CDS 40.0%
!! TCAACAAGGGAAGTCACTTT+TGG - chr8.3:54768172-54768191 MS.gene59811:CDS 40.0%
!!! CAACTAGCTGTTTTTGGTAG+AGG - chr8.3:54768469-54768488 MS.gene59811:intron 40.0%
AAAGCCATGCTCAACAACTC+AGG - chr8.3:54769009-54769028 MS.gene59811:CDS 45.0%
AAGATGCATACGAGGATTGG+AGG - chr8.3:54768539-54768558 MS.gene59811:intron 45.0%
ACTATGACCATCGCTCTTTG+TGG - chr8.3:54771807-54771826 MS.gene59811:CDS 45.0%
ACTTGGCCATGGATGTAATC+AGG - chr8.3:54772233-54772252 MS.gene59811:CDS 45.0%
AGAAAACTCTGTTGGGGTGA+GGG - chr8.3:54772610-54772629 MS.gene59811:CDS 45.0%
AGAGCTGGAATCAACAGCAT+TGG + chr8.3:54771118-54771137 None:intergenic 45.0%
AGATACCATACCATCTCCGA+TGG + chr8.3:54771249-54771268 None:intergenic 45.0%
AGCAGTGAAGAGAACATACC+TGG + chr8.3:54771894-54771913 None:intergenic 45.0%
AGGATATCGGGATCATAACC+TGG + chr8.3:54769287-54769306 None:intergenic 45.0%
AGTCCACCTGATTACATCCA+TGG + chr8.3:54772242-54772261 None:intergenic 45.0%
AGTTGAAGGAGTTAAGGAGC+TGG + chr8.3:54770212-54770231 None:intergenic 45.0%
ATCCAACAGGTTCCCCTTTA+TGG - chr8.3:54772653-54772672 MS.gene59811:CDS 45.0%
ATCCATAAAGGGGAACCTGT+TGG + chr8.3:54772658-54772677 None:intergenic 45.0%
ATGCTTATAGAGCGAACCTC+AGG - chr8.3:54769989-54770008 MS.gene59811:intron 45.0%
CAACATGTGATAGGTCAGAG+TGG - chr8.3:54772527-54772546 MS.gene59811:CDS 45.0%
CAAGCTACAATGGAGGTTGA+TGG - chr8.3:54768883-54768902 MS.gene59811:intron 45.0%
CACTCTGACCTATCACATGT+TGG + chr8.3:54772529-54772548 None:intergenic 45.0%
CACTCTGACTGAGAACAAGA+TGG - chr8.3:54769467-54769486 MS.gene59811:intron 45.0%
CACTGGAATTACCAACGACT+AGG - chr8.3:54771577-54771596 MS.gene59811:intron 45.0%
CAGAGTCACCAACATGTGAT+AGG - chr8.3:54772518-54772537 MS.gene59811:CDS 45.0%
CATAAAGCTGAGGACTCTGT+AGG + chr8.3:54772033-54772052 None:intergenic 45.0%
CCCTTTGATCCATATCTCAC+AGG + chr8.3:54768214-54768233 None:intergenic 45.0%
CCGACATGAGGAATGTGAAA+AGG + chr8.3:54769254-54769273 None:intergenic 45.0%
CGGAAGCTATTGAGTCTCTA+AGG - chr8.3:54770722-54770741 MS.gene59811:CDS 45.0%
CTACAGAGTCCTCAGCTTTA+TGG - chr8.3:54772031-54772050 MS.gene59811:CDS 45.0%
CTAGGTGGTCCAATAAGACT+AGG + chr8.3:54772831-54772850 None:intergenic 45.0%
CTTCCCCAATATGCAAAGAG+AGG + chr8.3:54772148-54772167 None:intergenic 45.0%
GAGTCCAAACCTGTGAGATA+TGG - chr8.3:54768202-54768221 MS.gene59811:CDS 45.0%
GATCCAAATGGCTGATGTTG+GGG - chr8.3:54771456-54771475 MS.gene59811:CDS 45.0%
GATGCTATACCGTCACTTCA+TGG - chr8.3:54772325-54772344 MS.gene59811:CDS 45.0%
GCTATGCAGGTTCAATGTCT+TGG - chr8.3:54770324-54770343 MS.gene59811:CDS 45.0%
GTGTGGAGAAAACTCTGTTG+GGG - chr8.3:54772604-54772623 MS.gene59811:CDS 45.0%
GTGTGTGGAGAAAACTCTGT+TGG - chr8.3:54772602-54772621 MS.gene59811:CDS 45.0%
GTTGAAGGAGTTAAGGAGCT+GGG + chr8.3:54770211-54770230 None:intergenic 45.0%
GTTGAGAGTTCCACATTGGA+TGG - chr8.3:54772894-54772913 MS.gene59811:CDS 45.0%
GTTGTGTGTCTTTGTCTACC+AGG - chr8.3:54771873-54771892 MS.gene59811:CDS 45.0%
TAAACTGCAGCAAGGTGTAC+CGG - chr8.3:54770702-54770721 MS.gene59811:CDS 45.0%
TACCGTCACTTCATGGTTAC+TGG - chr8.3:54772332-54772351 MS.gene59811:CDS 45.0%
TATCAGCTTGACTGTAGGGT+CGG + chr8.3:54769906-54769925 None:intergenic 45.0%
TCAAGGGCTAAAGCAGTTGA+AGG + chr8.3:54770226-54770245 None:intergenic 45.0%
TCGGATGTGTCAACAACAAG+AGG + chr8.3:54769887-54769906 None:intergenic 45.0%
TGAACATAAGCAACACCGGT+AGG + chr8.3:54768727-54768746 None:intergenic 45.0%
TGCTGTGAAAGATGCATACG+AGG - chr8.3:54768531-54768550 MS.gene59811:intron 45.0%
TGGCAAGCACCACATTATTC+TGG - chr8.3:54773022-54773041 MS.gene59811:CDS 45.0%
TTACCAACGACTAGGCTACA+TGG - chr8.3:54771585-54771604 MS.gene59811:intron 45.0%
TTCGTGCAAGTTCAAAGAGC+TGG + chr8.3:54771133-54771152 None:intergenic 45.0%
TTGAAGGAGTTAAGGAGCTG+GGG + chr8.3:54770210-54770229 None:intergenic 45.0%
TTGCAGGGCTATCTTTGATG+TGG - chr8.3:54773002-54773021 MS.gene59811:CDS 45.0%
! AACTTGCTCATTCTCAAGGC+TGG + chr8.3:54769541-54769560 None:intergenic 45.0%
! ACAATCCCAGCCTTTTGCAA+CGG + chr8.3:54771188-54771207 None:intergenic 45.0%
! ACAGAGTCCTCAGCTTTATG+GGG - chr8.3:54772033-54772052 MS.gene59811:CDS 45.0%
! CATTTGGAACATGACCTAGG+TGG + chr8.3:54772846-54772865 None:intergenic 45.0%
! GAAACTTTTCGTCAAAGGGG+CGG - chr8.3:54770414-54770433 MS.gene59811:CDS 45.0%
! GTTTTCTCCACACACGAGTT+AGG + chr8.3:54772597-54772616 None:intergenic 45.0%
! TCTATGGAGCTTGTTCGTGT+TGG - chr8.3:54769315-54769334 MS.gene59811:CDS 45.0%
! TGGATGTAATCAGGTGGACT+TGG - chr8.3:54772242-54772261 MS.gene59811:CDS 45.0%
!! AGAAGTACTTGCTGCCTCAA+AGG + chr8.3:54770596-54770615 None:intergenic 45.0%
!! CTAGTCTTATTGGACCACCT+AGG - chr8.3:54772829-54772848 MS.gene59811:CDS 45.0%
!! GGTTTGAGGACGCTTGTTAT+TGG - chr8.3:54770526-54770545 MS.gene59811:CDS 45.0%
AAAAAACGTAGCTGCGCCTG+AGG - chr8.3:54770912-54770931 MS.gene59811:CDS 50.0%
AACCTGTTGGATGCACAAGG+TGG + chr8.3:54772645-54772664 None:intergenic 50.0%
ACACATACAAGCGTGCACAC+AGG + chr8.3:54771764-54771783 None:intergenic 50.0%
ACCTGTTGGATGCACAAGGT+GGG + chr8.3:54772644-54772663 None:intergenic 50.0%
AGCTCCTGAGTTGTTGAGCA+TGG + chr8.3:54769016-54769035 None:intergenic 50.0%
ATGACTCTAGCCATCGGAGA+TGG - chr8.3:54771236-54771255 MS.gene59811:intron 50.0%
CAAATGGCTGATGTTGGGGT+TGG - chr8.3:54771460-54771479 MS.gene59811:CDS 50.0%
CAACCCCAACATCAGCCATT+TGG + chr8.3:54771462-54771481 None:intergenic 50.0%
CGTCTCACGACCACAATACA+CGG + chr8.3:54768989-54769008 None:intergenic 50.0%
CTTCAGTTTGCGCTGCTGTT+TGG - chr8.3:54769121-54769140 MS.gene59811:CDS 50.0%
GAGAAAACTCTGTTGGGGTG+AGG - chr8.3:54772609-54772628 MS.gene59811:CDS 50.0%
GCGTGTTGAGAGTTCCACAT+TGG - chr8.3:54772890-54772909 MS.gene59811:CDS 50.0%
GCTGACATGACTCTAGCCAT+CGG - chr8.3:54771230-54771249 MS.gene59811:intron 50.0%
GGTCAATTTGCACTTGGCCA+TGG - chr8.3:54772222-54772241 MS.gene59811:CDS 50.0%
GTCGTGCAGAAGACGTTTAC+AGG - chr8.3:54770870-54770889 MS.gene59811:CDS 50.0%
TAGCTCCGTTGCAAAAGGCT+GGG - chr8.3:54771180-54771199 MS.gene59811:intron 50.0%
TCAAGACGGCTCCTCTTAGA+CGG + chr8.3:54769039-54769058 None:intergenic 50.0%
TCGAGTAGCTCCGTTGCAAA+AGG - chr8.3:54771175-54771194 MS.gene59811:intron 50.0%
TCTAGCCATCGGAGATGGTA+TGG - chr8.3:54771241-54771260 MS.gene59811:intron 50.0%
TGCGATGATAGACCCCCAAA+TGG + chr8.3:54772281-54772300 None:intergenic 50.0%
TGGCCATGGATGTAATCAGG+TGG - chr8.3:54772236-54772255 MS.gene59811:CDS 50.0%
TTGTCGACGAGTGATCCTAC+CGG - chr8.3:54768709-54768728 MS.gene59811:intron 50.0%
! AGGTCAGAGTGGTAACGATC+AGG - chr8.3:54772538-54772557 MS.gene59811:CDS 50.0%
! GCTCTCATTTTGGGCTATGC+AGG - chr8.3:54770311-54770330 MS.gene59811:CDS 50.0%
!! GACGCTTGTTATTGGGATGC+GGG - chr8.3:54770534-54770553 MS.gene59811:CDS 50.0%
!! GGACGCTTGTTATTGGGATG+CGG - chr8.3:54770533-54770552 MS.gene59811:CDS 50.0%
!! GTTGGTGTTGCCGTGTATTG+TGG - chr8.3:54768976-54768995 MS.gene59811:CDS 50.0%
AAACTCTGTTGGGGTGAGGG+TGG - chr8.3:54772613-54772632 MS.gene59811:CDS 55.0%
AACTCTGTTGGGGTGAGGGT+GGG - chr8.3:54772614-54772633 MS.gene59811:CDS 55.0%
ACATATGCTGCCGCTGCCTA+TGG - chr8.3:54769962-54769981 MS.gene59811:intron 55.0%
ACCCACCTTGTGCATCCAAC+AGG - chr8.3:54772640-54772659 MS.gene59811:CDS 55.0%
ACTCAGGAGCTCCGTCTAAG+AGG - chr8.3:54769025-54769044 MS.gene59811:CDS 55.0%
CACGCCCTTCTCAAGCCTAT+AGG + chr8.3:54772875-54772894 None:intergenic 55.0%
CGGTAGCGCCCAATATGCAT+AGG + chr8.3:54770672-54770691 None:intergenic 55.0%
GCACCATGTAGCCTAGTCGT+TGG + chr8.3:54771591-54771610 None:intergenic 55.0%
GGAGGGTAGGCAAGCTGTAA+TGG - chr8.3:54771495-54771514 MS.gene59811:CDS 55.0%
GGGAACCTGTTGGATGCACA+AGG + chr8.3:54772648-54772667 None:intergenic 55.0%
GTAGCTCCGTTGCAAAAGGC+TGG - chr8.3:54771179-54771198 MS.gene59811:intron 55.0%
GTTGGCATCAGTGGTCAGGA+GGG - chr8.3:54771478-54771497 MS.gene59811:CDS 55.0%
TGGGGCTGGACAAAGACAAG+AGG - chr8.3:54772051-54772070 MS.gene59811:CDS 55.0%
TGTCCAGCCCCATAAAGCTG+AGG + chr8.3:54772043-54772062 None:intergenic 55.0%
! AGTCCTCAGCTTTATGGGGC+TGG - chr8.3:54772037-54772056 MS.gene59811:CDS 55.0%
! GATGTTGGGGTTGGCATCAG+TGG - chr8.3:54771469-54771488 MS.gene59811:CDS 55.0%
! GGAGCTTGTTCGTGTTGGTC+AGG - chr8.3:54769320-54769339 MS.gene59811:CDS 55.0%
! TAGGGCTGCTTTGCTTCGCA+AGG - chr8.3:54770624-54770643 MS.gene59811:CDS 55.0%
AACGTAGCTGCGCCTGAGGT+TGG - chr8.3:54770916-54770935 MS.gene59811:CDS 60.0%
GCATCAGTGGTCAGGAGGGT+AGG - chr8.3:54771482-54771501 MS.gene59811:CDS 60.0%
GGTTGGCATCAGTGGTCAGG+AGG - chr8.3:54771477-54771496 MS.gene59811:CDS 60.0%
! TGGGGTTGGCATCAGTGGTC+AGG - chr8.3:54771474-54771493 MS.gene59811:CDS 60.0%
!! GCTGGGAATTCGGTTCGGAC+CGG - chr8.3:54768343-54768362 MS.gene59811:intron 60.0%
TCTGTTGGGGTGAGGGTGGG+AGG - chr8.3:54772617-54772636 MS.gene59811:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 54768085 54773224 54768085 ID=MS.gene59811
chr8.3 mRNA 54768085 54773224 54768085 ID=MS.gene59811.t1;Parent=MS.gene59811
chr8.3 exon 54771733 54773224 54771733 ID=MS.gene59811.t1.exon1;Parent=MS.gene59811.t1
chr8.3 CDS 54771733 54773224 54771733 ID=cds.MS.gene59811.t1;Parent=MS.gene59811.t1
chr8.3 exon 54771262 54771568 54771262 ID=MS.gene59811.t1.exon2;Parent=MS.gene59811.t1
chr8.3 CDS 54771262 54771568 54771262 ID=cds.MS.gene59811.t1;Parent=MS.gene59811.t1
chr8.3 exon 54770265 54770976 54770265 ID=MS.gene59811.t1.exon3;Parent=MS.gene59811.t1
chr8.3 CDS 54770265 54770976 54770265 ID=cds.MS.gene59811.t1;Parent=MS.gene59811.t1
chr8.3 exon 54770052 54770175 54770052 ID=MS.gene59811.t1.exon4;Parent=MS.gene59811.t1
chr8.3 CDS 54770052 54770175 54770052 ID=cds.MS.gene59811.t1;Parent=MS.gene59811.t1
chr8.3 exon 54769653 54769872 54769653 ID=MS.gene59811.t1.exon5;Parent=MS.gene59811.t1
chr8.3 CDS 54769653 54769872 54769653 ID=cds.MS.gene59811.t1;Parent=MS.gene59811.t1
chr8.3 exon 54768956 54769414 54768956 ID=MS.gene59811.t1.exon6;Parent=MS.gene59811.t1
chr8.3 CDS 54768956 54769414 54768956 ID=cds.MS.gene59811.t1;Parent=MS.gene59811.t1
chr8.3 exon 54768085 54768301 54768085 ID=MS.gene59811.t1.exon7;Parent=MS.gene59811.t1
chr8.3 CDS 54768085 54768301 54768085 ID=cds.MS.gene59811.t1;Parent=MS.gene59811.t1
Gene Sequence

>MS.gene59811

ATGGATACAAAAAACCCATCTGGGAATTCTTCAAAGATTGAAACTTTCATGCATAATTCATCATCAAGAAGAAGTTCTGGTAGAAATTCAACAAGGGAAGTCACTTTTGGTCACTCTGAGTCCAAACCTGTGAGATATGGATCAAAGGGTGTTGCTGATTCTGAAGCATTCAGCATGTCTCAGAAAGAAATCAGTGATGAAGATGCTAGGTTGATTTATGTTGATGATCCTGATAGAACAAATGAGAGATTTGAATTTGCTGGGAATTCGGTTCGGACCGGAAAATACTCTTTTATAACTTTTCTTCCTAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATTTATTTCCTGATAATTGCTATTCTTAATCAGTTACCTCAACTAGCTGTTTTTGGTAGAGGTGTTTCAATTTTGCCATTGGCTTTTGTTCTTCTTGTTACTGCTGTGAAAGATGCATACGAGGATTGGAGGAGACATAGATCAGATAAAGTTGAGAACAATAGGTTAGGATTGGTTTTGGTTAATGGTCATTTCATTGAGAAGAAATGGAAAGATATTAGAGTTGGCGAGATCATTAAAATCAATGCAAATGAACCGATTCCGTGTGATTTTGTTTTGTTGTCGACGAGTGATCCTACCGGTGTTGCTTATGTTCAAACTCTTAATCTAGATGGTGAGTCTAATTTGAAGACTAGGTATGCAAAACAAGAGACTCAATTTAAGTTTCATGAAAAGGAGAGGTTTAGTGGTTTGATTAAGTGCGAGAAACCGAATAGGAATATATATGGATTTCAAGCTACAATGGAGGTTGATGGAAAGAGATTGTCACTTGGTTCCTCGAATATTGTACTTAGAGGATGTGAACTTAAGAATACTAATTGTGTGGTTGGTGTTGCCGTGTATTGTGGTCGTGAGACGAAAGCCATGCTCAACAACTCAGGAGCTCCGTCTAAGAGGAGCCGTCTTGAGACACAAATGAACTCTGAGATCATCATGCTTTCGTTCTTTCTTGTAGCTTTGTGTTCAGTTACTTCAGTTTGCGCTGCTGTTTGGTTAAAGCGAAACAAGAATGAATTGAATCGATTACCTTATTATAGGAAATTGGATTTTTCAAAGGGAAAAGAGGAAAGTTATCAATATTATGGATGGGGAGTGGAAATCCTTTTCACATTCCTCATGTCGGTTATAGTTTACCAGGTTATGATCCCGATATCCTTGTACATTTCTATGGAGCTTGTTCGTGTTGGTCAGGCCTACTTCATGATCAAAGATTCTAGATTGTATGATGAGGCAACGAATTCAAGATTTCAGTGTAGGGCCTTGAATATCAATGAAGATTTAGGGCAAATTAAATATGTCTTTTCAGACAAAACTGGCACTCTGACTGAGAACAAGATGGAGTTTCAATGCGCTAGTATTTGGGGTGTCGATTACAGTTCTGCAAAAGCCAGCCTTGAGAATGAGCAAGTTGAATACTCTCTTCAAGGTGCAATTTCTTCGTCAAATATGCTTGTCTGTTGTTCTAACATACTTTTAGCTTTAAGTTTATTGCATTTGTTCTTTTTTACTTCGTCAAATATGCATTTGTTCTAACATACTTTTATGCTTGCATTTGTTCTAACATATTTTTGTGTTGTTATTTGGTCTCAGTGAATGGAAAGGTCTTGAAGCCAAAAATGAGGGTGAAAGTTAATCAAGAGCTTATGCGATTAGCAAAAAGTGGATTTGCAAGCAAAGATGGAAAACGGATTTACGATTTCTTTCTTGCACTGGCAGCATGCAATACTATTGTGCCTCTTGTTGTTGACACATCCGACCCTACAGTCAAGCTGATAGATTATCAAGGGGAATCACCAGATGAACAAGCGTTGACATATGCTGCCGCTGCCTATGGTTTTATGCTTATAGAGCGAACCTCAGGTCACATAATGATTGATATTCATGGAGAACAACAAAGGTAAATTAATTTTTTTAATAAATTACTTTTTACTTCTTTTTCTTCCCCAAACAGACATTTTTATGTTGAAAATTGACAATTTAGAATGATTTGCTGTTAATGGTTTTGTATTAATGATGTTTAAGCAATTTGTAAGAGTATTTGCAAATATTATTTGAACCCCAGCTCCTTAACTCCTTCAACTGCTTTAGCCCTTGAATTTTTTTTTTTGAATAAGCTTTAGCCCTTGAATTAGGTCCCAAAGTAGTCCTTTTTTTATGAATGCTCTCATTTTGGGCTATGCAGGTTCAATGTCTTGGGGTTGCATGAATTTGATAGTGATCGGAAAAGAATGTCTGTTATATTGGGGTGCAATGACAATTCGGTGAAACTTTTCGTCAAAGGGGCGGATACATCAATGTTCAGTGTGATCAATAAATCATTGAATACAGACATAATACAGGATACTGAAACCCATCTTCACTCTTATTCTTCTGTGGGTTTGAGGACGCTTGTTATTGGGATGCGGGACTTAAATGCTTCAGAATTTGATCAATGGCATTTTGCCTTTGAGGCAGCAAGTACTTCTATGATTGGTAGGGCTGCTTTGCTTCGCAAGGTTGCTGCAAATGTAGAAAATAACCTATGCATATTGGGCGCTACCGCTATTGAAGATAAACTGCAGCAAGGTGTACCGGAAGCTATTGAGTCTCTAAGGAAAGCCGGTATTAAAGTATGGGTGTTGACTGGGGACAAACAAGAAACTGCCATATCAATTGGCTACTCGTCAAAGCTACTAACAAGCGGCATGACTCAATTTAGAATTAAGAGCAATAATCGAGAGTCGTGCAGAAGACGTTTACAGGATGCACTTCTCATGTCTAGAAAAAACGTAGCTGCGCCTGAGGTTGGCAACTATATTGAAGGAAGTTCTGATGGAGTTGTTTCAACTCCTATGGCGTTGATTATTGATGGTACCAGCCTTGTATATATTCTTGATAGTGAACTTGAAGAACAGGTATGTGCTGATAGATCTCAGATGGTGTTTACAATGCATTTCATGCTTATTTCTTATGTGCTGACTTTGACCAATGCTGTTGATTCCAGCTCTTTGAACTTGCACGAAGATGTTCCGTTGTTCTTTGTTGTCGAGTAGCTCCGTTGCAAAAGGCTGGGATTGTCTCTCTCGTAAAGAATAGGACGGCTGACATGACTCTAGCCATCGGAGATGGTATGGTATCTTCATTTTACTTGTTTCAGATTATCATTTCCCTTCAAATAATGAGAACGAAATACAAGGATAGAGAAAATGGAAAAGAAATAAAAGGCATCGGTTAAAAACAAAGATAAAAAAAATTCTATACATGATTTATTTTTGTGTAAATGATCTTTCTCCTTCATATGTTATAGGTGCTAACGATGTATCAATGATCCAAATGGCTGATGTTGGGGTTGGCATCAGTGGTCAGGAGGGTAGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTCGGTTTTTAGTTCCTCTCTTATTTGTACATGGACACTGGAATTACCAACGACTAGGCTACATGGTGCTATACAATTTTTACAGAAATGCTGTCTTTGTGCTAATTCTGTTTTGGTAAGTTAAAATTCAGCTTATGTTTATATGTAGATGTTGTCATCATTCAGTTTGTCATTGAGTATGCTACAAACATCAATTTAACCAATTTATTTCTATATGTGCCTGTGTGCACGCTTGTATGTGTGTGTTAGCATCACTTGTGCAAAAACTATGACCATCGCTCTTTGTGGCTTTTAAGATGCATGGTTTCAAATTTCGATATCTTACTATATTGTTGTGTGTCTTTGTCTACCAGGTATGTTCTCTTCACTGCTTTCACTTTGACAACAGCTATAAATGAATGGAGCAGCATGTTGTATTCAATAATCTACACTGCAGTGCCAACTATTGTTGTTGCCATTTTTGACAAGGATCTTAGTAAAAGGACTCTCCTACAGAGTCCTCAGCTTTATGGGGCTGGACAAAGACAAGAGGCCTACAACAAAAAATTGTTTTGGTTGACAATAGCCGATACGTTATGGCAAAGCATTGTTGTCTTTTTTGTTCCTCTCTTTGCATATTGGGGAAGCACTGTAGATATAGCAAGTATTGGGGATCTTTGGACTATTTCGATAGTTATTTTGGTCAATTTGCACTTGGCCATGGATGTAATCAGGTGGACTTGGATTTCTCATGCATCCATTTGGGGGTCTATCATCGCAACTTTCATATGTGTCATGGTTGTTGATGCTATACCGTCACTTCATGGTTACTGGTACGTTCTATCTTTATGCAAATGAATCCAACGCTGTAAAACACAAGGAGATGACATGTTTATTTTTAAAACATTGCCAATTAGTCATGTCATGCATGCATGTGAATATGTTTATTTTTATAGTCATTATAAAATAAGTCATTTTATTATGTTTTAAAATGGCTCAGAGTCACCAACATGTGATAGGTCAGAGTGGTAACGATCAGGCAGCTTAAGCAAGTAGTCATCAATGTTTCAATTCCTAACTCGTGTGTGGAGAAAACTCTGTTGGGGTGAGGGTGGGAGGACCCACCTTGTGCATCCAACAGGTTCCCCTTTATGGATTGCAAAATCAATCCTCTTAAATAAGTCTATGTTGGATAGTGGTATACTCTGAATTCGAGTTATAAGTCGAGAAAAATCCTTATCTTACAAGTCAACTTTGTAGGGTTGAGTTAGACTCAACTCAAATTCTAAGATGATATTTGTTTCTATCCTAGTCTTATTGGACCACCTAGGTCATGTTCCAAATGTTCAATCCTATAGGCTTGAGAAGGGCGTGTTGAGAGTTCCACATTGGATGGCTTAAATAGTTTTTATATGCGAGAATTTCTACATTATTTTGTAATCGTGTAACATAAAATCTGACTATTACATGTGTACAAAACTTTGCAGGGCTATCTTTGATGTGGCAAGCACCACATTATTCTGGTTATGTTTGTTTGGAATACTGATAGCAGCATTGCTTCCACGTTTTGTTGTAAAGTTTATTTATCAATATTACTGTCCCGACGATATTCAGATTTCAAGAGAAATCGAGAAGTTTGAGAATAGAAGGGTCAATGGAGATAGACAGATAGAAATGCTTCACATCTCAAATCCACAAAGATAA

Protein sequence

>MS.gene59811.t1

MDTKNPSGNSSKIETFMHNSSSRRSSGRNSTREVTFGHSESKPVRYGSKGVADSEAFSMSQKEISDEDARLIYVDDPDRTNERFEFAGNSVRTGKYSFITFLPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHRSDKVENNRLGLVLVNGHFIEKKWKDIRVGEIIKINANEPIPCDFVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQFKFHEKERFSGLIKCEKPNRNIYGFQATMEVDGKRLSLGSSNIVLRGCELKNTNCVVGVAVYCGRETKAMLNNSGAPSKRSRLETQMNSEIIMLSFFLVALCSVTSVCAAVWLKRNKNELNRLPYYRKLDFSKGKEESYQYYGWGVEILFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMIKDSRLYDEATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSSAKASLENEQVEYSLQVNGKVLKPKMRVKVNQELMRLAKSGFASKDGKRIYDFFLALAACNTIVPLVVDTSDPTVKLIDYQGESPDEQALTYAAAAYGFMLIERTSGHIMIDIHGEQQRFNVLGLHEFDSDRKRMSVILGCNDNSVKLFVKGADTSMFSVINKSLNTDIIQDTETHLHSYSSVGLRTLVIGMRDLNASEFDQWHFAFEAASTSMIGRAALLRKVAANVENNLCILGATAIEDKLQQGVPEAIESLRKAGIKVWVLTGDKQETAISIGYSSKLLTSGMTQFRIKSNNRESCRRRLQDALLMSRKNVAAPEVGNYIEGSSDGVVSTPMALIIDGTSLVYILDSELEEQLFELARRCSVVLCCRVAPLQKAGIVSLVKNRTADMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLFVHGHWNYQRLGYMVLYNFYRNAVFVLILFWYVLFTAFTLTTAINEWSSMLYSIIYTAVPTIVVAIFDKDLSKRTLLQSPQLYGAGQRQEAYNKKLFWLTIADTLWQSIVVFFVPLFAYWGSTVDIASIGDLWTISIVILVNLHLAMDVIRWTWISHASIWGSIIATFICVMVVDAIPSLHGYWAIFDVASTTLFWLCLFGILIAALLPRFVVKFIYQYYCPDDIQISREIEKFENRRVNGDRQIEMLHISNPQR