Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66359.t1 | KEH27246.1 | 94.2 | 379 | 22 | 0 | 16 | 394 | 2 | 380 | 3.30E-205 | 724.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66359.t1 | C0LGR6 | 55.2 | 364 | 162 | 1 | 32 | 394 | 8 | 371 | 1.5e-116 | 421.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66359.t1 | A0A072UCQ8 | 94.2 | 379 | 22 | 0 | 16 | 394 | 2 | 380 | 2.4e-205 | 724.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049232 | MS.gene66359 | -0.803255 | 3.80E-49 | -1.69E-46 |
| MS.gene049285 | MS.gene66359 | -0.808287 | 3.34E-50 | -1.69E-46 |
| MS.gene050165 | MS.gene66359 | -0.815663 | 8.24E-52 | -1.69E-46 |
| MS.gene050323 | MS.gene66359 | -0.808797 | 2.60E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene66359 | -0.824977 | 6.03E-54 | -1.69E-46 |
| MS.gene050496 | MS.gene66359 | -0.820829 | 5.58E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene66359 | -0.814878 | 1.23E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene66359 | -0.830628 | 2.64E-55 | -1.69E-46 |
| MS.gene05079 | MS.gene66359 | 0.802363 | 5.81E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene66359 | -0.816913 | 4.33E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene66359 | -0.812958 | 3.26E-51 | -1.69E-46 |
| MS.gene050876 | MS.gene66359 | -0.810946 | 8.95E-51 | -1.69E-46 |
| MS.gene051044 | MS.gene66359 | 0.806982 | 6.31E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene66359 | 0.826531 | 2.58E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene66359 | -0.805982 | 1.03E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene66359 | 0.821297 | 4.35E-53 | -1.69E-46 |
| MS.gene051366 | MS.gene66359 | 0.831593 | 1.53E-55 | -1.69E-46 |
| MS.gene051367 | MS.gene66359 | 0.822106 | 2.83E-53 | -1.69E-46 |
| MS.gene051810 | MS.gene66359 | -0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene051949 | MS.gene66359 | -0.816152 | 6.41E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene66359 | 0.826815 | 2.21E-54 | -1.69E-46 |
| MS.gene054056 | MS.gene66359 | 0.827036 | 1.95E-54 | -1.69E-46 |
| MS.gene054057 | MS.gene66359 | 0.816901 | 4.36E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene66359 | -0.821313 | 4.31E-53 | -1.69E-46 |
| MS.gene055204 | MS.gene66359 | 0.806093 | 9.72E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene66359 | -0.804052 | 2.60E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene66359 | -0.817656 | 2.94E-52 | -1.69E-46 |
| MS.gene055776 | MS.gene66359 | -0.832804 | 7.67E-56 | -1.69E-46 |
| MS.gene055849 | MS.gene66359 | -0.822066 | 2.89E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene66359 | -0.80781 | 4.21E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene66359 | 0.845702 | 3.44E-59 | -1.69E-46 |
| MS.gene056504 | MS.gene66359 | -0.835629 | 1.50E-56 | -1.69E-46 |
| MS.gene056657 | MS.gene66359 | -0.801151 | 1.03E-48 | -1.69E-46 |
| MS.gene056761 | MS.gene66359 | 0.810904 | 9.14E-51 | -1.69E-46 |
| MS.gene056857 | MS.gene66359 | 0.810734 | 9.95E-51 | -1.69E-46 |
| MS.gene058268 | MS.gene66359 | 0.826941 | 2.06E-54 | -1.69E-46 |
| MS.gene058269 | MS.gene66359 | 0.815675 | 8.19E-52 | -1.69E-46 |
| MS.gene058334 | MS.gene66359 | 0.808752 | 2.65E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene66359 | -0.817529 | 3.15E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene66359 | -0.834432 | 3.01E-56 | -1.69E-46 |
| MS.gene05912 | MS.gene66359 | -0.835216 | 1.91E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene66359 | -0.802912 | 4.48E-49 | -1.69E-46 |
| MS.gene059677 | MS.gene66359 | -0.814966 | 1.18E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene66359 | -0.848018 | 8.01E-60 | -1.69E-46 |
| MS.gene060595 | MS.gene66359 | 0.802568 | 5.27E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene66359 | -0.844739 | 6.27E-59 | -1.69E-46 |
| MS.gene060762 | MS.gene66359 | -0.835879 | 1.30E-56 | -1.69E-46 |
| MS.gene060823 | MS.gene66359 | 0.803489 | 3.40E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene66359 | -0.804436 | 2.16E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66359.t1 | MTR_6g090605 | 94.195 | 379 | 22 | 0 | 16 | 394 | 2 | 380 | 0.0 | 706 |
| MS.gene66359.t1 | MTR_6g090615 | 88.140 | 371 | 44 | 0 | 24 | 394 | 1 | 371 | 0.0 | 680 |
| MS.gene66359.t1 | MTR_8g015150 | 45.902 | 366 | 183 | 8 | 33 | 394 | 9 | 363 | 5.88e-93 | 292 |
| MS.gene66359.t1 | MTR_8g015150 | 45.902 | 366 | 183 | 8 | 33 | 394 | 9 | 363 | 1.21e-92 | 292 |
| MS.gene66359.t1 | MTR_8g014930 | 45.506 | 356 | 180 | 6 | 42 | 394 | 24 | 368 | 2.76e-92 | 290 |
| MS.gene66359.t1 | MTR_8g014930 | 45.506 | 356 | 180 | 6 | 42 | 394 | 24 | 368 | 4.48e-92 | 291 |
| MS.gene66359.t1 | MTR_8g015150 | 45.902 | 366 | 183 | 8 | 33 | 394 | 9 | 363 | 7.89e-91 | 292 |
| MS.gene66359.t1 | MTR_8g014930 | 45.506 | 356 | 180 | 6 | 42 | 394 | 24 | 368 | 1.44e-90 | 290 |
| MS.gene66359.t1 | MTR_8g014930 | 45.506 | 356 | 180 | 6 | 42 | 394 | 19 | 363 | 3.35e-90 | 290 |
| MS.gene66359.t1 | MTR_8g014760 | 43.048 | 374 | 201 | 6 | 23 | 394 | 5 | 368 | 4.37e-88 | 276 |
| MS.gene66359.t1 | MTR_8g014700 | 43.514 | 370 | 198 | 7 | 28 | 394 | 10 | 371 | 4.00e-87 | 278 |
| MS.gene66359.t1 | MTR_8g014760 | 43.048 | 374 | 201 | 6 | 23 | 394 | 5 | 368 | 4.65e-87 | 276 |
| MS.gene66359.t1 | MTR_8g014790 | 43.467 | 375 | 201 | 6 | 24 | 394 | 1 | 368 | 6.14e-87 | 281 |
| MS.gene66359.t1 | MTR_8g014760 | 43.048 | 374 | 201 | 6 | 23 | 394 | 5 | 368 | 1.16e-86 | 277 |
| MS.gene66359.t1 | MTR_8g014690 | 43.467 | 375 | 197 | 7 | 28 | 394 | 6 | 373 | 2.97e-86 | 276 |
| MS.gene66359.t1 | MTR_2g100450 | 44.086 | 372 | 190 | 9 | 31 | 394 | 5 | 366 | 1.64e-85 | 275 |
| MS.gene66359.t1 | MTR_8g014700 | 43.514 | 370 | 198 | 7 | 28 | 394 | 10 | 371 | 2.60e-85 | 277 |
| MS.gene66359.t1 | MTR_8g014700 | 43.514 | 370 | 198 | 7 | 28 | 394 | 10 | 371 | 3.71e-85 | 277 |
| MS.gene66359.t1 | MTR_8g014760 | 43.048 | 374 | 201 | 6 | 23 | 394 | 1 | 364 | 6.93e-85 | 276 |
| MS.gene66359.t1 | MTR_2g100450 | 44.086 | 372 | 190 | 9 | 31 | 394 | 5 | 366 | 1.13e-84 | 276 |
| MS.gene66359.t1 | MTR_8g014690 | 43.443 | 366 | 195 | 6 | 34 | 394 | 8 | 366 | 6.32e-84 | 273 |
| MS.gene66359.t1 | MTR_8g015340 | 43.840 | 349 | 184 | 7 | 50 | 394 | 42 | 382 | 3.25e-82 | 270 |
| MS.gene66359.t1 | MTR_8g015190 | 43.820 | 356 | 184 | 8 | 47 | 394 | 46 | 393 | 8.42e-81 | 266 |
| MS.gene66359.t1 | MTR_8g015200 | 43.768 | 345 | 183 | 5 | 52 | 394 | 10 | 345 | 1.00e-80 | 265 |
| MS.gene66359.t1 | MTR_8g014730 | 40.741 | 378 | 203 | 7 | 23 | 394 | 5 | 367 | 2.53e-80 | 259 |
| MS.gene66359.t1 | MTR_8g015190 | 43.820 | 356 | 184 | 8 | 47 | 394 | 36 | 383 | 2.19e-79 | 265 |
| MS.gene66359.t1 | MTR_8g015190 | 36.564 | 227 | 119 | 2 | 27 | 232 | 983 | 1205 | 9.24e-36 | 139 |
| MS.gene66359.t1 | MTR_8g014840 | 42.105 | 361 | 174 | 7 | 28 | 380 | 1 | 334 | 2.03e-77 | 243 |
| MS.gene66359.t1 | MTR_8g461120 | 41.333 | 375 | 201 | 12 | 30 | 394 | 20 | 385 | 2.64e-76 | 250 |
| MS.gene66359.t1 | MTR_8g461120 | 41.333 | 375 | 201 | 12 | 30 | 394 | 20 | 385 | 2.54e-75 | 250 |
| MS.gene66359.t1 | MTR_8g461120 | 41.333 | 375 | 201 | 12 | 30 | 394 | 20 | 385 | 3.05e-75 | 250 |
| MS.gene66359.t1 | MTR_8g028110 | 39.578 | 379 | 214 | 7 | 23 | 394 | 5 | 375 | 2.54e-73 | 245 |
| MS.gene66359.t1 | MTR_2g100470 | 41.477 | 352 | 188 | 7 | 50 | 394 | 13 | 353 | 3.17e-73 | 243 |
| MS.gene66359.t1 | MTR_8g015010 | 38.133 | 375 | 188 | 15 | 51 | 394 | 50 | 411 | 4.53e-57 | 201 |
| MS.gene66359.t1 | MTR_8g015040 | 35.733 | 375 | 206 | 11 | 48 | 394 | 55 | 422 | 3.40e-53 | 190 |
| MS.gene66359.t1 | MTR_5g058090 | 35.754 | 358 | 207 | 10 | 50 | 394 | 37 | 384 | 9.28e-48 | 174 |
| MS.gene66359.t1 | MTR_6g071455 | 33.234 | 337 | 203 | 12 | 50 | 382 | 24 | 342 | 6.49e-39 | 146 |
| MS.gene66359.t1 | MTR_6g071455 | 33.234 | 337 | 203 | 12 | 50 | 382 | 24 | 342 | 1.57e-38 | 146 |
| MS.gene66359.t1 | MTR_8g014980 | 45.503 | 189 | 88 | 5 | 51 | 230 | 14 | 196 | 1.80e-38 | 137 |
| MS.gene66359.t1 | MTR_8g015100 | 46.199 | 171 | 80 | 4 | 47 | 212 | 51 | 214 | 6.29e-35 | 137 |
| MS.gene66359.t1 | MTR_1g066950 | 32.133 | 361 | 194 | 12 | 48 | 379 | 23 | 361 | 2.25e-33 | 132 |
| MS.gene66359.t1 | MTR_3g086120 | 29.722 | 360 | 205 | 12 | 48 | 379 | 21 | 360 | 4.33e-32 | 128 |
| MS.gene66359.t1 | MTR_3g086120 | 29.722 | 360 | 205 | 12 | 48 | 379 | 21 | 360 | 4.70e-32 | 128 |
| MS.gene66359.t1 | MTR_7g100630 | 32.410 | 361 | 193 | 14 | 47 | 379 | 28 | 365 | 1.02e-31 | 127 |
| MS.gene66359.t1 | MTR_2g100450 | 39.241 | 158 | 91 | 2 | 240 | 394 | 6 | 161 | 1.16e-25 | 109 |
| MS.gene66359.t1 | MTR_1g104850 | 26.912 | 353 | 227 | 14 | 51 | 393 | 25 | 356 | 5.83e-22 | 97.8 |
| MS.gene66359.t1 | MTR_4g086250 | 27.100 | 369 | 233 | 17 | 32 | 385 | 16 | 363 | 1.39e-21 | 96.7 |
| MS.gene66359.t1 | MTR_7g057170 | 34.632 | 231 | 126 | 9 | 30 | 253 | 10 | 222 | 5.48e-21 | 95.5 |
| MS.gene66359.t1 | MTR_7g057170 | 34.632 | 231 | 126 | 9 | 30 | 253 | 10 | 222 | 6.17e-21 | 95.5 |
| MS.gene66359.t1 | MTR_8g015150 | 42.373 | 118 | 67 | 1 | 278 | 394 | 1 | 118 | 2.11e-20 | 93.6 |
| MS.gene66359.t1 | MTR_5g030920 | 25.000 | 368 | 236 | 15 | 30 | 383 | 10 | 351 | 1.55e-13 | 72.8 |
| MS.gene66359.t1 | MTR_5g030920 | 24.862 | 362 | 244 | 14 | 30 | 383 | 10 | 351 | 1.97e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66359.t1 | AT4G29180 | 55.220 | 364 | 162 | 1 | 32 | 394 | 8 | 371 | 3.25e-140 | 422 |
| MS.gene66359.t1 | AT4G29180 | 55.220 | 364 | 162 | 1 | 32 | 394 | 8 | 371 | 4.40e-140 | 422 |
| MS.gene66359.t1 | AT4G29180 | 55.220 | 364 | 162 | 1 | 32 | 394 | 8 | 371 | 5.09e-140 | 421 |
| MS.gene66359.t1 | AT4G29450 | 57.703 | 357 | 148 | 3 | 41 | 394 | 16 | 372 | 3.83e-134 | 405 |
| MS.gene66359.t1 | AT4G29990 | 42.818 | 369 | 199 | 6 | 32 | 394 | 4 | 366 | 1.09e-89 | 286 |
| MS.gene66359.t1 | AT4G29990 | 42.818 | 369 | 199 | 6 | 32 | 394 | 4 | 366 | 1.42e-88 | 286 |
| MS.gene66359.t1 | AT2G19210 | 41.223 | 376 | 211 | 6 | 23 | 394 | 2 | 371 | 1.00e-85 | 278 |
| MS.gene66359.t1 | AT1G05700 | 45.067 | 375 | 170 | 10 | 35 | 394 | 14 | 367 | 1.88e-85 | 277 |
| MS.gene66359.t1 | AT1G05700 | 45.067 | 375 | 170 | 10 | 35 | 394 | 14 | 367 | 2.26e-85 | 278 |
| MS.gene66359.t1 | AT2G19230 | 41.828 | 361 | 198 | 7 | 40 | 394 | 18 | 372 | 8.41e-82 | 268 |
| MS.gene66359.t1 | AT2G19230 | 41.828 | 361 | 198 | 7 | 40 | 394 | 18 | 372 | 7.73e-81 | 268 |
| MS.gene66359.t1 | AT2G19190 | 40.263 | 380 | 209 | 9 | 23 | 394 | 2 | 371 | 1.68e-76 | 254 |
| MS.gene66359.t1 | AT1G51790 | 40.212 | 378 | 210 | 8 | 24 | 394 | 1 | 369 | 2.12e-76 | 253 |
| MS.gene66359.t1 | AT1G51790 | 40.212 | 378 | 210 | 8 | 24 | 394 | 1 | 369 | 2.12e-76 | 253 |
| MS.gene66359.t1 | AT1G51790 | 40.212 | 378 | 210 | 8 | 24 | 394 | 1 | 369 | 3.63e-76 | 254 |
| MS.gene66359.t1 | AT1G51880 | 39.459 | 370 | 211 | 7 | 29 | 394 | 6 | 366 | 1.62e-74 | 248 |
| MS.gene66359.t1 | AT1G51880 | 39.459 | 370 | 211 | 7 | 29 | 394 | 24 | 384 | 2.01e-74 | 248 |
| MS.gene66359.t1 | AT1G51880 | 39.459 | 370 | 211 | 7 | 29 | 394 | 24 | 384 | 2.49e-74 | 248 |
| MS.gene66359.t1 | AT1G51800 | 38.133 | 375 | 215 | 8 | 24 | 394 | 1 | 362 | 6.38e-74 | 247 |
| MS.gene66359.t1 | AT1G51910 | 39.084 | 371 | 212 | 7 | 29 | 394 | 6 | 367 | 2.28e-71 | 240 |
| MS.gene66359.t1 | AT5G59680 | 37.989 | 358 | 201 | 7 | 45 | 394 | 22 | 366 | 4.02e-70 | 236 |
| MS.gene66359.t1 | AT3G46400 | 37.568 | 370 | 214 | 7 | 32 | 394 | 8 | 367 | 1.75e-69 | 235 |
| MS.gene66359.t1 | AT1G49100 | 36.898 | 374 | 217 | 8 | 29 | 394 | 7 | 369 | 1.46e-68 | 232 |
| MS.gene66359.t1 | AT1G51890 | 37.398 | 369 | 218 | 7 | 30 | 394 | 3 | 362 | 2.96e-68 | 229 |
| MS.gene66359.t1 | AT3G46340 | 37.433 | 374 | 220 | 8 | 26 | 394 | 5 | 369 | 4.29e-68 | 231 |
| MS.gene66359.t1 | AT3G21340 | 37.736 | 371 | 210 | 10 | 32 | 394 | 13 | 370 | 1.66e-67 | 226 |
| MS.gene66359.t1 | AT1G51890 | 37.398 | 369 | 218 | 7 | 30 | 394 | 3 | 362 | 2.18e-67 | 229 |
| MS.gene66359.t1 | AT1G51890 | 37.398 | 369 | 218 | 7 | 30 | 394 | 3 | 362 | 2.73e-67 | 229 |
| MS.gene66359.t1 | AT1G51860 | 39.200 | 375 | 204 | 11 | 30 | 394 | 7 | 367 | 5.44e-67 | 228 |
| MS.gene66359.t1 | AT3G46330 | 37.234 | 376 | 214 | 10 | 27 | 392 | 3 | 366 | 7.51e-67 | 228 |
| MS.gene66359.t1 | AT3G46330 | 37.234 | 376 | 214 | 10 | 27 | 392 | 3 | 366 | 7.85e-67 | 227 |
| MS.gene66359.t1 | AT3G21340 | 37.568 | 370 | 212 | 9 | 32 | 394 | 13 | 370 | 3.48e-66 | 226 |
| MS.gene66359.t1 | AT5G59650 | 39.024 | 369 | 196 | 10 | 38 | 394 | 15 | 366 | 5.08e-66 | 225 |
| MS.gene66359.t1 | AT2G14440 | 37.466 | 371 | 209 | 10 | 24 | 384 | 1 | 358 | 1.48e-65 | 224 |
| MS.gene66359.t1 | AT2G14510 | 36.490 | 359 | 216 | 6 | 30 | 384 | 7 | 357 | 4.50e-65 | 223 |
| MS.gene66359.t1 | AT2G14510 | 36.490 | 359 | 216 | 6 | 30 | 384 | 15 | 365 | 5.29e-65 | 223 |
| MS.gene66359.t1 | AT5G59650 | 39.276 | 359 | 189 | 10 | 38 | 384 | 15 | 356 | 5.35e-65 | 223 |
| MS.gene66359.t1 | AT1G51870 | 37.968 | 374 | 217 | 9 | 27 | 394 | 3 | 367 | 6.46e-65 | 222 |
| MS.gene66359.t1 | AT2G28990 | 37.158 | 366 | 218 | 6 | 32 | 394 | 5 | 361 | 7.35e-65 | 222 |
| MS.gene66359.t1 | AT2G28990 | 37.158 | 366 | 218 | 6 | 32 | 394 | 5 | 361 | 7.35e-65 | 222 |
| MS.gene66359.t1 | AT1G51850 | 36.620 | 355 | 209 | 7 | 43 | 394 | 17 | 358 | 7.81e-65 | 222 |
| MS.gene66359.t1 | AT1G51870 | 37.968 | 374 | 217 | 9 | 27 | 394 | 3 | 367 | 1.09e-64 | 222 |
| MS.gene66359.t1 | AT1G51820 | 37.465 | 355 | 206 | 7 | 43 | 394 | 17 | 358 | 3.29e-64 | 220 |
| MS.gene66359.t1 | AT5G59670 | 37.430 | 358 | 208 | 8 | 43 | 394 | 19 | 366 | 2.21e-63 | 218 |
| MS.gene66359.t1 | AT5G59670 | 37.430 | 358 | 208 | 8 | 43 | 394 | 19 | 366 | 2.21e-63 | 218 |
| MS.gene66359.t1 | AT1G07550 | 36.338 | 355 | 215 | 5 | 43 | 394 | 20 | 366 | 6.31e-63 | 217 |
| MS.gene66359.t1 | AT1G07560 | 36.464 | 362 | 214 | 7 | 39 | 394 | 17 | 368 | 2.84e-62 | 215 |
| MS.gene66359.t1 | AT4G20450 | 35.325 | 385 | 219 | 12 | 32 | 394 | 10 | 386 | 4.14e-62 | 214 |
| MS.gene66359.t1 | AT4G20450 | 35.325 | 385 | 219 | 12 | 32 | 394 | 10 | 386 | 5.18e-62 | 214 |
| MS.gene66359.t1 | AT2G29000 | 35.544 | 377 | 222 | 10 | 24 | 394 | 1 | 362 | 5.90e-62 | 214 |
| MS.gene66359.t1 | AT2G04300 | 36.729 | 373 | 218 | 9 | 31 | 394 | 8 | 371 | 1.03e-61 | 214 |
| MS.gene66359.t1 | AT1G51805 | 37.604 | 359 | 201 | 10 | 43 | 394 | 17 | 359 | 2.05e-61 | 213 |
| MS.gene66359.t1 | AT3G46420 | 38.211 | 369 | 213 | 7 | 32 | 394 | 7 | 366 | 2.30e-61 | 212 |
| MS.gene66359.t1 | AT1G51850 | 35.493 | 355 | 193 | 7 | 43 | 394 | 17 | 338 | 3.18e-60 | 209 |
| MS.gene66359.t1 | AT2G28960 | 38.904 | 365 | 188 | 13 | 33 | 382 | 8 | 352 | 6.51e-57 | 200 |
| MS.gene66359.t1 | AT1G51805 | 35.097 | 359 | 186 | 10 | 43 | 394 | 17 | 335 | 9.53e-55 | 194 |
| MS.gene66359.t1 | AT2G04300 | 37.092 | 337 | 192 | 9 | 31 | 360 | 8 | 331 | 2.61e-53 | 190 |
| MS.gene66359.t1 | AT3G46350 | 38.050 | 318 | 174 | 10 | 34 | 342 | 12 | 315 | 1.07e-52 | 182 |
| MS.gene66359.t1 | AT3G46370 | 39.007 | 282 | 164 | 6 | 116 | 394 | 2 | 278 | 6.35e-50 | 180 |
| MS.gene66359.t1 | AT3G46370 | 39.007 | 282 | 164 | 6 | 116 | 394 | 2 | 278 | 6.35e-50 | 180 |
| MS.gene66359.t1 | AT5G16900 | 33.862 | 378 | 218 | 13 | 34 | 394 | 8 | 370 | 1.00e-46 | 169 |
| MS.gene66359.t1 | AT5G16900 | 38.298 | 282 | 162 | 8 | 34 | 314 | 8 | 278 | 5.12e-46 | 169 |
| MS.gene66359.t1 | AT5G16900 | 38.298 | 282 | 162 | 8 | 34 | 314 | 8 | 278 | 5.12e-46 | 169 |
| MS.gene66359.t1 | AT1G51840 | 42.857 | 175 | 90 | 4 | 43 | 216 | 24 | 189 | 1.10e-37 | 135 |
| MS.gene66359.t1 | AT1G51840 | 42.857 | 175 | 90 | 4 | 43 | 216 | 24 | 189 | 1.10e-37 | 135 |
| MS.gene66359.t1 | AT1G51840 | 42.857 | 175 | 90 | 4 | 43 | 216 | 24 | 189 | 1.10e-37 | 135 |
| MS.gene66359.t1 | AT1G51840 | 42.857 | 175 | 90 | 4 | 43 | 216 | 24 | 189 | 1.10e-37 | 135 |
| MS.gene66359.t1 | AT1G51840 | 42.857 | 175 | 90 | 4 | 43 | 216 | 24 | 189 | 1.10e-37 | 135 |
| MS.gene66359.t1 | AT1G51810 | 34.440 | 241 | 146 | 6 | 158 | 394 | 1 | 233 | 1.70e-34 | 135 |
| MS.gene66359.t1 | AT1G24485 | 29.412 | 357 | 226 | 10 | 31 | 382 | 11 | 346 | 1.54e-33 | 130 |
| MS.gene66359.t1 | AT1G24485 | 29.412 | 357 | 226 | 10 | 31 | 382 | 11 | 346 | 3.14e-33 | 130 |
| MS.gene66359.t1 | AT1G24485 | 29.609 | 358 | 224 | 12 | 31 | 382 | 11 | 346 | 5.26e-33 | 129 |
| MS.gene66359.t1 | AT1G67720 | 30.769 | 364 | 195 | 13 | 48 | 379 | 22 | 360 | 8.69e-33 | 130 |
| MS.gene66359.t1 | AT3G46270 | 32.153 | 367 | 215 | 16 | 31 | 382 | 7 | 354 | 9.14e-33 | 128 |
| MS.gene66359.t1 | AT3G46270 | 32.153 | 367 | 215 | 16 | 31 | 382 | 15 | 362 | 9.66e-33 | 128 |
| MS.gene66359.t1 | AT1G24485 | 29.609 | 358 | 224 | 12 | 31 | 382 | 11 | 346 | 2.15e-32 | 128 |
| MS.gene66359.t1 | AT1G51860 | 37.826 | 230 | 125 | 8 | 174 | 394 | 3 | 223 | 1.21e-31 | 127 |
| MS.gene66359.t1 | AT2G28970 | 34.529 | 223 | 140 | 3 | 174 | 394 | 11 | 229 | 5.88e-31 | 125 |
| MS.gene66359.t1 | AT3G46260 | 30.084 | 359 | 214 | 14 | 42 | 382 | 15 | 354 | 8.32e-31 | 122 |
| MS.gene66359.t1 | AT5G59660 | 29.630 | 378 | 172 | 13 | 24 | 394 | 16 | 306 | 2.21e-30 | 124 |
| MS.gene66359.t1 | AT5G59660 | 29.630 | 378 | 172 | 13 | 24 | 394 | 16 | 306 | 2.32e-30 | 123 |
| MS.gene66359.t1 | AT2G37050 | 32.143 | 364 | 194 | 18 | 46 | 379 | 22 | 362 | 1.53e-29 | 121 |
| MS.gene66359.t1 | AT2G37050 | 32.143 | 364 | 194 | 18 | 46 | 379 | 22 | 362 | 1.54e-29 | 121 |
| MS.gene66359.t1 | AT2G37050 | 32.143 | 364 | 194 | 18 | 46 | 379 | 22 | 362 | 1.60e-29 | 121 |
| MS.gene66359.t1 | AT2G37050 | 32.143 | 364 | 194 | 18 | 46 | 379 | 22 | 362 | 1.74e-29 | 120 |
| MS.gene66359.t1 | AT5G59660 | 33.219 | 292 | 141 | 10 | 108 | 394 | 42 | 284 | 4.78e-29 | 119 |
| MS.gene66359.t1 | AT3G46280 | 29.620 | 368 | 219 | 16 | 31 | 382 | 5 | 348 | 4.86e-29 | 118 |
| MS.gene66359.t1 | AT3G19230 | 29.641 | 334 | 196 | 12 | 71 | 385 | 37 | 350 | 2.78e-27 | 113 |
| MS.gene66359.t1 | AT3G46240 | 30.172 | 348 | 189 | 14 | 43 | 384 | 1 | 300 | 3.80e-27 | 112 |
| MS.gene66359.t1 | AT1G51890 | 35.211 | 213 | 131 | 4 | 185 | 394 | 90 | 298 | 7.93e-27 | 113 |
| MS.gene66359.t1 | AT1G51890 | 39.785 | 93 | 51 | 2 | 28 | 119 | 1 | 89 | 1.10e-12 | 70.1 |
| MS.gene66359.t1 | AT1G51830 | 36.364 | 165 | 102 | 2 | 232 | 394 | 13 | 176 | 6.29e-25 | 107 |
| MS.gene66359.t1 | AT1G51830 | 36.364 | 165 | 102 | 2 | 232 | 394 | 6 | 169 | 6.41e-25 | 107 |
| MS.gene66359.t1 | AT2G28960 | 33.761 | 234 | 132 | 8 | 158 | 382 | 1 | 220 | 9.93e-25 | 107 |
| MS.gene66359.t1 | AT5G48740 | 35.096 | 208 | 120 | 9 | 51 | 254 | 20 | 216 | 1.42e-21 | 97.4 |
| MS.gene66359.t1 | AT2G28970 | 34.375 | 160 | 102 | 2 | 237 | 394 | 106 | 264 | 7.06e-21 | 95.5 |
| MS.gene66359.t1 | AT3G05990 | 27.920 | 351 | 213 | 15 | 53 | 385 | 28 | 356 | 3.73e-19 | 89.7 |
| MS.gene66359.t1 | AT5G59616 | 34.615 | 104 | 66 | 1 | 293 | 394 | 1 | 104 | 1.35e-12 | 65.5 |
| MS.gene66359.t1 | AT5G16900 | 37.349 | 83 | 51 | 1 | 232 | 314 | 11 | 92 | 5.79e-11 | 64.7 |
Find 55 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATGTTGGTGTAAATTTC+TGG | 0.160577 | 6.4:-62930183 | MS.gene66359:CDS |
| TAAACATTGAATTTCAAATT+TGG | 0.169603 | 6.4:+62929740 | None:intergenic |
| ACGATGTTTACGATAGAATT+TGG | 0.218503 | 6.4:-62929919 | MS.gene66359:CDS |
| CACAAGGCTCCTCTTATTCT+TGG | 0.235747 | 6.4:-62931560 | MS.gene66359:CDS |
| TGGGACATTGGTTCATTTAA+TGG | 0.238692 | 6.4:-62929959 | MS.gene66359:CDS |
| TCTATTTATAAAACTGAGTT+TGG | 0.261521 | 6.4:-62930013 | MS.gene66359:CDS |
| TGAAATTCTATAATGATGTT+AGG | 0.269396 | 6.4:+62931581 | None:intergenic |
| ATAAGAGCTTCTTTCTTGTA+TGG | 0.317064 | 6.4:-62930244 | MS.gene66359:CDS |
| AGTTCCAAAGCTGAGATAAA+AGG | 0.321370 | 6.4:+62930052 | None:intergenic |
| CAATTAATCGGTAACAGTTC+CGG | 0.348124 | 6.4:+62930293 | None:intergenic |
| CTGAGATCTGAGAGTGGATA+TGG | 0.352130 | 6.4:+62930334 | None:intergenic |
| AAGGAATGAGAATGATAGTT+TGG | 0.363195 | 6.4:-62929786 | MS.gene66359:CDS |
| TGAGAGAATTCAATGTATCT+TGG | 0.373475 | 6.4:-62929676 | MS.gene66359:CDS |
| AATGTTTGTCTTGTGAATAA+AGG | 0.373692 | 6.4:-62930085 | MS.gene66359:CDS |
| CGATTAATTGCCGGAACAAA+AGG | 0.383758 | 6.4:-62930280 | MS.gene66359:CDS |
| AACTGTTACCGATTAATTGC+CGG | 0.390663 | 6.4:-62930289 | MS.gene66359:CDS |
| TCTTCGAAAATCGATGTTAG+TGG | 0.393576 | 6.4:-62929857 | MS.gene66359:CDS |
| AAACTATCATTCTCATTCCT+TGG | 0.405478 | 6.4:+62929788 | None:intergenic |
| TTCCATGAAAAGGAATTAAG+AGG | 0.412273 | 6.4:+62929893 | None:intergenic |
| AGGTGGAAGTGTTGAATCTT+CGG | 0.415841 | 6.4:+62929544 | None:intergenic |
| CCAGTGATGACAAATTCAAT+TGG | 0.427066 | 6.4:-62931536 | MS.gene66359:CDS |
| GAGAGTGGATATGGTAGATT+AGG | 0.427233 | 6.4:+62930343 | None:intergenic |
| CCAATTGAATTTGTCATCAC+TGG | 0.428835 | 6.4:+62931536 | None:intergenic |
| GTGGTTGCTTGCAAGTATCT+TGG | 0.429256 | 6.4:+62929623 | None:intergenic |
| GCTTATAGATTTCCATGAAA+AGG | 0.439426 | 6.4:+62929883 | None:intergenic |
| GATGGATCTTTCATACAAAC+AGG | 0.440515 | 6.4:-62930409 | MS.gene66359:CDS |
| GTTCATGCACAACAACAAAC+AGG | 0.451581 | 6.4:-62931470 | MS.gene66359:intron |
| GAAATTCTATAATGATGTTA+GGG | 0.463240 | 6.4:+62931582 | None:intergenic |
| TGCTTCAGAACAAGTTGCAT+TGG | 0.463718 | 6.4:-62930140 | MS.gene66359:CDS |
| GGTATTATTGATTTAATCAA+AGG | 0.466863 | 6.4:+62929644 | None:intergenic |
| CCAACATAGAGATCAAATTC+AGG | 0.468796 | 6.4:+62930196 | None:intergenic |
| CCTGAATTTGATCTCTATGT+TGG | 0.470869 | 6.4:-62930196 | MS.gene66359:CDS |
| ATTGGTTCATTTAATGGAAG+TGG | 0.474592 | 6.4:-62929953 | MS.gene66359:CDS |
| TGTCTTGTGAATAAAGGAAA+AGG | 0.476060 | 6.4:-62930079 | MS.gene66359:CDS |
| ATACCATCTTCTTCAGATGT+TGG | 0.490806 | 6.4:+62929473 | None:intergenic |
| ATCACTGGACCAAGAATAAG+AGG | 0.495960 | 6.4:+62931551 | None:intergenic |
| AAAATCGATGTTAGTGGAGA+TGG | 0.497758 | 6.4:-62929851 | MS.gene66359:CDS |
| ATCTCCACTGCATTAAGTAT+AGG | 0.526223 | 6.4:+62929524 | None:intergenic |
| TTCTTGTATGGAAACTATGA+CGG | 0.528880 | 6.4:-62930232 | MS.gene66359:CDS |
| GCATTGCTAATAACTTCAAA+TGG | 0.532439 | 6.4:+62929818 | None:intergenic |
| AAAATAAAATACGTCACAGA+TGG | 0.549242 | 6.4:-62930427 | MS.gene66359:CDS |
| GAATTCAATGTATCTTGGAA+TGG | 0.554144 | 6.4:-62929671 | MS.gene66359:CDS |
| CTTCCAACATCTGAAGAAGA+TGG | 0.554676 | 6.4:-62929476 | None:intergenic |
| TCCACTGCATTAAGTATAGG+TGG | 0.589660 | 6.4:+62929527 | None:intergenic |
| TCCACCTATACTTAATGCAG+TGG | 0.595122 | 6.4:-62929528 | MS.gene66359:CDS |
| GGCTTCATAAGCATTGATTG+TGG | 0.601577 | 6.4:-62930487 | MS.gene66359:CDS |
| TTCATAAGCATTGATTGTGG+TGG | 0.603402 | 6.4:-62930484 | MS.gene66359:CDS |
| TGCATTGGAAATAATCAGCA+CGG | 0.612755 | 6.4:-62930125 | MS.gene66359:CDS |
| TTATAAATAGAGTTATCAAG+TGG | 0.621564 | 6.4:+62930025 | None:intergenic |
| CATCATTATAGAATTTCACA+AGG | 0.648575 | 6.4:-62931576 | MS.gene66359:CDS |
| AAACTTCTGAGATCTGAGAG+TGG | 0.652061 | 6.4:+62930328 | None:intergenic |
| CGTTGATCGCAAATGAACAT+CGG | 0.678019 | 6.4:-62929583 | MS.gene66359:CDS |
| TAACAGTTCCGGTTTCCATG+AGG | 0.684045 | 6.4:+62930304 | None:intergenic |
| TTAGCAATGCTGCTACACCA+AGG | 0.720310 | 6.4:-62929805 | MS.gene66359:CDS |
| CGACTTCGAATTAAACACAG+TGG | 0.726219 | 6.4:+62929604 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATTTATTGAAAAAG+AGG | - | chr6.4:62930304-62930323 | MS.gene66359:CDS | 10.0% |
| !! | TTACTAACTATAATTAATAA+GGG | + | chr6.4:62930008-62930027 | None:intergenic | 10.0% |
| !! | TTATTGAAATGTAATAAATA+AGG | - | chr6.4:62930041-62930060 | MS.gene66359:CDS | 10.0% |
| !! | TTTACTAACTATAATTAATA+AGG | + | chr6.4:62930009-62930028 | None:intergenic | 10.0% |
| !!! | AAATTTTTTAAAACAACTTA+TGG | + | chr6.4:62930294-62930313 | None:intergenic | 10.0% |
| !! | AATAAATAAGGATATGTTAA+TGG | - | chr6.4:62930053-62930072 | MS.gene66359:CDS | 15.0% |
| !! | GTTGTATTTGTATTATAAAA+TGG | - | chr6.4:62930091-62930110 | MS.gene66359:CDS | 15.0% |
| !! | TAAACATTGAATTTCAAATT+TGG | + | chr6.4:62931339-62931358 | None:intergenic | 15.0% |
| !! | ATTCATGATTATGATGATAT+AGG | - | chr6.4:62929685-62929704 | MS.gene66359:CDS | 20.0% |
| !! | CAAATCTCATAAATTTATCT+GGG | - | chr6.4:62930258-62930277 | MS.gene66359:CDS | 20.0% |
| !! | GAAATTCTATAATGATGTTA+GGG | + | chr6.4:62929497-62929516 | None:intergenic | 20.0% |
| !! | TCAAATCTCATAAATTTATC+TGG | - | chr6.4:62930257-62930276 | MS.gene66359:CDS | 20.0% |
| !! | TCTATTTATAAAACTGAGTT+TGG | - | chr6.4:62931063-62931082 | MS.gene66359:intron | 20.0% |
| !! | TGAAATTCTATAATGATGTT+AGG | + | chr6.4:62929498-62929517 | None:intergenic | 20.0% |
| !! | TTATAAATAGAGTTATCAAG+TGG | + | chr6.4:62931054-62931073 | None:intergenic | 20.0% |
| !!! | ATATAATTTGCTTTCTATTC+AGG | - | chr6.4:62930568-62930587 | MS.gene66359:intron | 20.0% |
| !!! | GGTATTATTGATTTAATCAA+AGG | + | chr6.4:62931435-62931454 | None:intergenic | 20.0% |
| !!! | TAAGTTCATATTTGTTTTGA+CGG | - | chr6.4:62929719-62929738 | MS.gene66359:CDS | 20.0% |
| !!! | TTTACTTATGATACTCTTTT+GGG | - | chr6.4:62930216-62930235 | MS.gene66359:CDS | 20.0% |
| !!! | TTTTACTTATGATACTCTTT+TGG | - | chr6.4:62930215-62930234 | MS.gene66359:CDS | 20.0% |
| ! | AAAATAAAATACGTCACAGA+TGG | - | chr6.4:62930649-62930668 | MS.gene66359:intron | 25.0% |
| ! | AATGTTTGTCTTGTGAATAA+AGG | - | chr6.4:62930991-62931010 | MS.gene66359:intron | 25.0% |
| ! | ATATGCAACGTTTAATATCA+TGG | - | chr6.4:62929859-62929878 | MS.gene66359:CDS | 25.0% |
| ! | CATCATTATAGAATTTCACA+AGG | - | chr6.4:62929500-62929519 | MS.gene66359:CDS | 25.0% |
| ! | GTCAAAGAAAAATAGTAAAG+AGG | - | chr6.4:62930127-62930146 | MS.gene66359:CDS | 25.0% |
| !!! | ATGATAGTTTGGAATTTTCT+TGG | - | chr6.4:62931301-62931320 | MS.gene66359:intron | 25.0% |
| !!! | ATGGTAGATTAGGATTTTTT+GGG | + | chr6.4:62930726-62930745 | None:intergenic | 25.0% |
| !!! | ATTGTCACTTTTCAAAAGAT+GGG | - | chr6.4:62931098-62931117 | MS.gene66359:intron | 25.0% |
| !!! | CTATGTTTTAAATTACGATG+AGG | + | chr6.4:62929837-62929856 | None:intergenic | 25.0% |
| !!! | GGAGTAATTTTTTAGTATCA+TGG | - | chr6.4:62930170-62930189 | MS.gene66359:CDS | 25.0% |
| !!! | TATGGTAGATTAGGATTTTT+TGG | + | chr6.4:62930727-62930746 | None:intergenic | 25.0% |
| AAACTATCATTCTCATTCCT+TGG | + | chr6.4:62931291-62931310 | None:intergenic | 30.0% | |
| AAGGAATGAGAATGATAGTT+TGG | - | chr6.4:62931290-62931309 | MS.gene66359:intron | 30.0% | |
| ACGATGTTTACGATAGAATT+TGG | - | chr6.4:62931157-62931176 | MS.gene66359:intron | 30.0% | |
| ATAAGAGCTTCTTTCTTGTA+TGG | - | chr6.4:62930832-62930851 | MS.gene66359:intron | 30.0% | |
| GAATTCAATGTATCTTGGAA+TGG | - | chr6.4:62931405-62931424 | MS.gene66359:intron | 30.0% | |
| GACATACAAATCGATTACAT+AGG | + | chr6.4:62930476-62930495 | None:intergenic | 30.0% | |
| GCATTGCTAATAACTTCAAA+TGG | + | chr6.4:62931261-62931280 | None:intergenic | 30.0% | |
| GCTTATAGATTTCCATGAAA+AGG | + | chr6.4:62931196-62931215 | None:intergenic | 30.0% | |
| TCTATGTTGGTGTAAATTTC+TGG | - | chr6.4:62930893-62930912 | MS.gene66359:intron | 30.0% | |
| TGAGAGAATTCAATGTATCT+TGG | - | chr6.4:62931400-62931419 | MS.gene66359:intron | 30.0% | |
| TGTCTTGTGAATAAAGGAAA+AGG | - | chr6.4:62930997-62931016 | MS.gene66359:intron | 30.0% | |
| TTCCATGAAAAGGAATTAAG+AGG | + | chr6.4:62931186-62931205 | None:intergenic | 30.0% | |
| TTCTTGTATGGAAACTATGA+CGG | - | chr6.4:62930844-62930863 | MS.gene66359:intron | 30.0% | |
| TTGAATGTAATCACATGTGT+CGG | + | chr6.4:62930424-62930443 | None:intergenic | 30.0% | |
| ! | ACACTTTCAATTTGAAGTGT+CGG | + | chr6.4:62930350-62930369 | None:intergenic | 30.0% |
| ! | ATTGGTTCATTTAATGGAAG+TGG | - | chr6.4:62931123-62931142 | MS.gene66359:intron | 30.0% |
| ! | TCTGATTTTACCAAAAGTCA+CGG | - | chr6.4:62929768-62929787 | MS.gene66359:CDS | 30.0% |
| ! | TCTGTGTACTCAAAATTTTC+TGG | + | chr6.4:62930619-62930638 | None:intergenic | 30.0% |
| ! | TGATGCTTCATACTTTTATG+TGG | - | chr6.4:62930519-62930538 | MS.gene66359:intron | 30.0% |
| ! | TTCCTCTTAATTCCTTTTCA+TGG | - | chr6.4:62931181-62931200 | MS.gene66359:intron | 30.0% |
| !! | AAATTTTGAGTACACAGATG+AGG | - | chr6.4:62930621-62930640 | MS.gene66359:intron | 30.0% |
| !! | CGGTGTTTTAGATAAAATCA+TGG | - | chr6.4:62929739-62929758 | MS.gene66359:CDS | 30.0% |
| !!! | CATTGTCACTTTTCAAAAGA+TGG | - | chr6.4:62931097-62931116 | MS.gene66359:intron | 30.0% |
| AAAATCGATGTTAGTGGAGA+TGG | - | chr6.4:62931225-62931244 | MS.gene66359:intron | 35.0% | |
| AGAGGACACCTATTATAAGA+TGG | - | chr6.4:62930145-62930164 | MS.gene66359:CDS | 35.0% | |
| AGTTCCAAAGCTGAGATAAA+AGG | + | chr6.4:62931027-62931046 | None:intergenic | 35.0% | |
| ATCTCCACTGCATTAAGTAT+AGG | + | chr6.4:62931555-62931574 | None:intergenic | 35.0% | |
| CAATTAATCGGTAACAGTTC+CGG | + | chr6.4:62930786-62930805 | None:intergenic | 35.0% | |
| CCAACATAGAGATCAAATTC+AGG | + | chr6.4:62930883-62930902 | None:intergenic | 35.0% | |
| CCAATTGAATTTGTCATCAC+TGG | + | chr6.4:62929543-62929562 | None:intergenic | 35.0% | |
| CCAGTGATGACAAATTCAAT+TGG | - | chr6.4:62929540-62929559 | MS.gene66359:CDS | 35.0% | |
| CCTGAATTTGATCTCTATGT+TGG | - | chr6.4:62930880-62930899 | MS.gene66359:intron | 35.0% | |
| GACACCTATTATAAGATGGA+GGG | - | chr6.4:62930149-62930168 | MS.gene66359:CDS | 35.0% | |
| GATGGATCTTTCATACAAAC+AGG | - | chr6.4:62930667-62930686 | MS.gene66359:intron | 35.0% | |
| TACTCCCTCCATCTTATAAT+AGG | + | chr6.4:62930156-62930175 | None:intergenic | 35.0% | |
| TCTTCGAAAATCGATGTTAG+TGG | - | chr6.4:62931219-62931238 | MS.gene66359:intron | 35.0% | |
| TGCATTGGAAATAATCAGCA+CGG | - | chr6.4:62930951-62930970 | MS.gene66359:intron | 35.0% | |
| ! | AACTCCTTTTATCTCAGCTT+TGG | - | chr6.4:62931020-62931039 | MS.gene66359:intron | 35.0% |
| ! | AACTGTTACCGATTAATTGC+CGG | - | chr6.4:62930787-62930806 | MS.gene66359:intron | 35.0% |
| ! | AAGCATAAAACCGTGACTTT+TGG | + | chr6.4:62929781-62929800 | None:intergenic | 35.0% |
| ! | ATGTAAACTGCCTTTTGTTC+CGG | + | chr6.4:62930809-62930828 | None:intergenic | 35.0% |
| ! | CTTTTCAAAAGATGGGACAT+TGG | - | chr6.4:62931105-62931124 | MS.gene66359:intron | 35.0% |
| ! | CTTTTGTTCCGGCAATTAAT+CGG | + | chr6.4:62930798-62930817 | None:intergenic | 35.0% |
| !! | TGGGACATTGGTTCATTTAA+TGG | - | chr6.4:62931117-62931136 | MS.gene66359:intron | 35.0% |
| !! | TTCATAAGCATTGATTGTGG+TGG | - | chr6.4:62930592-62930611 | MS.gene66359:intron | 35.0% |
| !!! | TCATTCTGCTTCTCGTTTTT+TGG | - | chr6.4:62929565-62929584 | MS.gene66359:CDS | 35.0% |
| AAGTGACACCTATTGTGAGA+CGG | + | chr6.4:62929907-62929926 | None:intergenic | 40.0% | |
| ATCACTGGACCAAGAATAAG+AGG | + | chr6.4:62929528-62929547 | None:intergenic | 40.0% | |
| CGACTTCGAATTAAACACAG+TGG | + | chr6.4:62931475-62931494 | None:intergenic | 40.0% | |
| CGATTAATTGCCGGAACAAA+AGG | - | chr6.4:62930796-62930815 | MS.gene66359:intron | 40.0% | |
| CGTTGATCGCAAATGAACAT+CGG | - | chr6.4:62931493-62931512 | MS.gene66359:CDS | 40.0% | |
| GAGAGTGGATATGGTAGATT+AGG | + | chr6.4:62930736-62930755 | None:intergenic | 40.0% | |
| GATTCTCTTGTAGAAGCTGA+TGG | + | chr6.4:62929642-62929661 | None:intergenic | 40.0% | |
| GGACACCTATTATAAGATGG+AGG | - | chr6.4:62930148-62930167 | MS.gene66359:CDS | 40.0% | |
| GTTCATGCACAACAACAAAC+AGG | - | chr6.4:62929606-62929625 | MS.gene66359:CDS | 40.0% | |
| TACTCTAACCGTCTCACAAT+AGG | - | chr6.4:62929896-62929915 | MS.gene66359:CDS | 40.0% | |
| TCCACCTATACTTAATGCAG+TGG | - | chr6.4:62931548-62931567 | MS.gene66359:CDS | 40.0% | |
| TCCACTGCATTAAGTATAGG+TGG | + | chr6.4:62931552-62931571 | None:intergenic | 40.0% | |
| TGCTTCAGAACAAGTTGCAT+TGG | - | chr6.4:62930936-62930955 | MS.gene66359:intron | 40.0% | |
| ! | GAAGTTTTCCTCATGGAAAC+CGG | - | chr6.4:62930764-62930783 | MS.gene66359:intron | 40.0% |
| ! | GATCTCAGAAGTTTTCCTCA+TGG | - | chr6.4:62930757-62930776 | MS.gene66359:intron | 40.0% |
| !! | AAACTTCTGAGATCTGAGAG+TGG | + | chr6.4:62930751-62930770 | None:intergenic | 40.0% |
| !! | AGGTGGAAGTGTTGAATCTT+CGG | + | chr6.4:62931535-62931554 | None:intergenic | 40.0% |
| !! | GGCTTCATAAGCATTGATTG+TGG | - | chr6.4:62930589-62930608 | MS.gene66359:intron | 40.0% |
| !!! | CTGCTTCTCGTTTTTTGGTT+TGG | - | chr6.4:62929570-62929589 | MS.gene66359:CDS | 40.0% |
| CACAAGGCTCCTCTTATTCT+TGG | - | chr6.4:62929516-62929535 | MS.gene66359:CDS | 45.0% | |
| CTGAGATCTGAGAGTGGATA+TGG | + | chr6.4:62930745-62930764 | None:intergenic | 45.0% | |
| GTGGTTGCTTGCAAGTATCT+TGG | + | chr6.4:62931456-62931475 | None:intergenic | 45.0% | |
| TAACAGTTCCGGTTTCCATG+AGG | + | chr6.4:62930775-62930794 | None:intergenic | 45.0% | |
| TTAGCAATGCTGCTACACCA+AGG | - | chr6.4:62931271-62931290 | MS.gene66359:intron | 45.0% | |
| !! | GTGTCATGTTGGTGTTACGT+GGG | + | chr6.4:62930402-62930421 | None:intergenic | 45.0% |
| !! | CACATGTGTCGGTGTCATGT+TGG | + | chr6.4:62930413-62930432 | None:intergenic | 50.0% |
| !! | GGTGTCATGTTGGTGTTACG+TGG | + | chr6.4:62930403-62930422 | None:intergenic | 50.0% |
| !! | GGGTGCTGCTAAACACGTGT+TGG | + | chr6.4:62930382-62930401 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 62929477 | 62931621 | 62929477 | ID=MS.gene66359 |
| chr6.4 | mRNA | 62929477 | 62931621 | 62929477 | ID=MS.gene66359.t1;Parent=MS.gene66359 |
| chr6.4 | exon | 62931471 | 62931621 | 62931471 | ID=MS.gene66359.t1.exon1;Parent=MS.gene66359.t1 |
| chr6.4 | CDS | 62931471 | 62931621 | 62931471 | ID=cds.MS.gene66359.t1;Parent=MS.gene66359.t1 |
| chr6.4 | exon | 62929477 | 62930508 | 62929477 | ID=MS.gene66359.t1.exon2;Parent=MS.gene66359.t1 |
| chr6.4 | CDS | 62929477 | 62930508 | 62929477 | ID=cds.MS.gene66359.t1;Parent=MS.gene66359.t1 |
| Gene Sequence |
| Protein sequence |
