Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71342.t1 | XP_003615990.1 | 86.5 | 325 | 34 | 3 | 1 | 315 | 1 | 325 | 2.90E-151 | 544.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71342.t1 | P22195 | 55.2 | 310 | 125 | 6 | 12 | 313 | 11 | 314 | 1.7e-83 | 310.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71342.t1 | Q40372 | 86.5 | 325 | 34 | 3 | 1 | 315 | 1 | 325 | 2.1e-151 | 544.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049549 | MS.gene71342 | 0.83884 | 2.26E-57 | -1.69E-46 |
| MS.gene050329 | MS.gene71342 | 0.815756 | 7.85E-52 | -1.69E-46 |
| MS.gene050344 | MS.gene71342 | 0.809201 | 2.13E-50 | -1.69E-46 |
| MS.gene051131 | MS.gene71342 | 0.81849 | 1.91E-52 | -1.69E-46 |
| MS.gene051996 | MS.gene71342 | 0.820804 | 5.65E-53 | -1.69E-46 |
| MS.gene052011 | MS.gene71342 | 0.809875 | 1.52E-50 | -1.69E-46 |
| MS.gene052223 | MS.gene71342 | 0.854213 | 1.43E-61 | -1.69E-46 |
| MS.gene05240 | MS.gene71342 | 0.836157 | 1.10E-56 | -1.69E-46 |
| MS.gene052702 | MS.gene71342 | 0.828923 | 6.86E-55 | -1.69E-46 |
| MS.gene052706 | MS.gene71342 | 0.811681 | 6.20E-51 | -1.69E-46 |
| MS.gene053406 | MS.gene71342 | 0.800581 | 1.35E-48 | -1.69E-46 |
| MS.gene054138 | MS.gene71342 | 0.835734 | 1.41E-56 | -1.69E-46 |
| MS.gene054147 | MS.gene71342 | 0.80478 | 1.83E-49 | -1.69E-46 |
| MS.gene054277 | MS.gene71342 | 0.914115 | 2.80E-84 | -1.69E-46 |
| MS.gene054742 | MS.gene71342 | 0.869468 | 3.03E-66 | -1.69E-46 |
| MS.gene055215 | MS.gene71342 | 0.825726 | 4.01E-54 | -1.69E-46 |
| MS.gene055601 | MS.gene71342 | 0.82095 | 5.23E-53 | -1.69E-46 |
| MS.gene056076 | MS.gene71342 | 0.813185 | 2.91E-51 | -1.69E-46 |
| MS.gene056330 | MS.gene71342 | 0.868151 | 8.08E-66 | -1.69E-46 |
| MS.gene056590 | MS.gene71342 | 0.812811 | 3.51E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene71342 | 0.809489 | 1.84E-50 | -1.69E-46 |
| MS.gene056680 | MS.gene71342 | 0.801938 | 7.11E-49 | -1.69E-46 |
| MS.gene056690 | MS.gene71342 | 0.832898 | 7.27E-56 | -1.69E-46 |
| MS.gene056691 | MS.gene71342 | 0.828815 | 7.29E-55 | -1.69E-46 |
| MS.gene056715 | MS.gene71342 | 0.805163 | 1.52E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene71342 | 0.831555 | 1.56E-55 | -1.69E-46 |
| MS.gene056920 | MS.gene71342 | 0.88233 | 1.14E-70 | -1.69E-46 |
| MS.gene056922 | MS.gene71342 | 0.838807 | 2.31E-57 | -1.69E-46 |
| MS.gene056923 | MS.gene71342 | 0.857735 | 1.33E-62 | -1.69E-46 |
| MS.gene056924 | MS.gene71342 | 0.850586 | 1.54E-60 | -1.69E-46 |
| MS.gene056925 | MS.gene71342 | 0.809606 | 1.74E-50 | -1.69E-46 |
| MS.gene057261 | MS.gene71342 | 0.806553 | 7.78E-50 | -1.69E-46 |
| MS.gene057544 | MS.gene71342 | 0.842773 | 2.11E-58 | -1.69E-46 |
| MS.gene058177 | MS.gene71342 | 0.812408 | 4.30E-51 | -1.69E-46 |
| MS.gene058218 | MS.gene71342 | 0.801125 | 1.04E-48 | -1.69E-46 |
| MS.gene058381 | MS.gene71342 | 0.819162 | 1.34E-52 | -1.69E-46 |
| MS.gene058450 | MS.gene71342 | 0.805189 | 1.51E-49 | -1.69E-46 |
| MS.gene059039 | MS.gene71342 | 0.808816 | 2.57E-50 | -1.69E-46 |
| MS.gene059043 | MS.gene71342 | 0.828333 | 9.53E-55 | -1.69E-46 |
| MS.gene059955 | MS.gene71342 | 0.801559 | 8.50E-49 | -1.69E-46 |
| MS.gene060087 | MS.gene71342 | 0.854323 | 1.33E-61 | -1.69E-46 |
| MS.gene061094 | MS.gene71342 | 0.804294 | 2.31E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71342.t1 | MTR_5g074860 | 86.462 | 325 | 34 | 3 | 1 | 315 | 1 | 325 | 0.0 | 560 |
| MS.gene71342.t1 | MTR_5g074860 | 74.769 | 325 | 33 | 4 | 1 | 315 | 1 | 286 | 1.11e-165 | 462 |
| MS.gene71342.t1 | MTR_5g074760 | 66.044 | 321 | 101 | 2 | 1 | 314 | 1 | 320 | 5.82e-151 | 426 |
| MS.gene71342.t1 | MTR_5g074740 | 65.421 | 321 | 103 | 2 | 1 | 314 | 1 | 320 | 4.17e-150 | 424 |
| MS.gene71342.t1 | MTR_5g074710 | 65.109 | 321 | 104 | 2 | 1 | 314 | 1 | 320 | 6.68e-150 | 424 |
| MS.gene71342.t1 | MTR_3g467600 | 62.102 | 314 | 111 | 3 | 9 | 314 | 10 | 323 | 5.16e-137 | 391 |
| MS.gene71342.t1 | MTR_4g029170 | 54.154 | 325 | 121 | 6 | 6 | 314 | 8 | 320 | 1.75e-114 | 334 |
| MS.gene71342.t1 | MTR_3g466200 | 53.538 | 325 | 119 | 9 | 9 | 314 | 8 | 319 | 1.06e-110 | 324 |
| MS.gene71342.t1 | MTR_4g029180 | 57.432 | 296 | 112 | 6 | 28 | 314 | 30 | 320 | 1.27e-109 | 321 |
| MS.gene71342.t1 | MTR_3g094650 | 51.818 | 330 | 129 | 7 | 1 | 313 | 4 | 320 | 1.13e-107 | 317 |
| MS.gene71342.t1 | MTR_5g074700 | 67.713 | 223 | 58 | 1 | 92 | 314 | 5 | 213 | 1.28e-106 | 310 |
| MS.gene71342.t1 | MTR_5g083860 | 51.703 | 323 | 125 | 8 | 9 | 314 | 16 | 324 | 2.08e-106 | 313 |
| MS.gene71342.t1 | MTR_3g094670 | 53.560 | 323 | 119 | 8 | 9 | 313 | 11 | 320 | 4.24e-104 | 307 |
| MS.gene71342.t1 | MTR_4g029200 | 50.155 | 323 | 147 | 6 | 1 | 314 | 20 | 337 | 6.05e-103 | 305 |
| MS.gene71342.t1 | MTR_5g074970 | 50.445 | 337 | 130 | 9 | 1 | 313 | 1 | 324 | 1.66e-101 | 301 |
| MS.gene71342.t1 | MTR_2g084020 | 48.308 | 325 | 140 | 7 | 6 | 314 | 5 | 317 | 1.83e-99 | 295 |
| MS.gene71342.t1 | MTR_2g084010 | 48.923 | 325 | 138 | 7 | 6 | 314 | 5 | 317 | 1.98e-99 | 295 |
| MS.gene71342.t1 | MTR_3g094630 | 54.574 | 317 | 127 | 8 | 9 | 314 | 11 | 321 | 1.48e-98 | 293 |
| MS.gene71342.t1 | MTR_2g084080 | 49.074 | 324 | 136 | 8 | 7 | 314 | 6 | 316 | 1.86e-98 | 293 |
| MS.gene71342.t1 | MTR_3g072190 | 48.457 | 324 | 137 | 7 | 8 | 314 | 7 | 317 | 6.55e-97 | 289 |
| MS.gene71342.t1 | MTR_3g072190 | 56.522 | 253 | 104 | 4 | 63 | 314 | 3 | 250 | 1.14e-96 | 286 |
| MS.gene71342.t1 | MTR_2g084110 | 49.231 | 325 | 136 | 9 | 6 | 314 | 5 | 316 | 4.40e-96 | 287 |
| MS.gene71342.t1 | MTR_4g029190 | 49.231 | 325 | 149 | 9 | 1 | 314 | 20 | 339 | 1.42e-95 | 286 |
| MS.gene71342.t1 | MTR_1g115900 | 47.546 | 326 | 153 | 8 | 1 | 314 | 1 | 320 | 1.08e-94 | 284 |
| MS.gene71342.t1 | MTR_2g084000 | 48.113 | 318 | 150 | 7 | 7 | 314 | 6 | 318 | 2.93e-94 | 282 |
| MS.gene71342.t1 | MTR_7g072480 | 49.682 | 314 | 138 | 7 | 12 | 314 | 11 | 315 | 1.14e-93 | 281 |
| MS.gene71342.t1 | MTR_7g026990 | 46.914 | 324 | 152 | 8 | 5 | 314 | 4 | 321 | 1.82e-93 | 280 |
| MS.gene71342.t1 | MTR_7g072510 | 45.625 | 320 | 146 | 6 | 10 | 314 | 5 | 311 | 1.70e-92 | 277 |
| MS.gene71342.t1 | MTR_2g084090 | 46.061 | 330 | 149 | 8 | 1 | 314 | 1 | 317 | 2.30e-92 | 277 |
| MS.gene71342.t1 | MTR_4g083710 | 46.951 | 328 | 155 | 9 | 1 | 314 | 1 | 323 | 8.46e-91 | 273 |
| MS.gene71342.t1 | MTR_3g466180 | 48.089 | 314 | 151 | 6 | 8 | 314 | 14 | 322 | 2.38e-90 | 272 |
| MS.gene71342.t1 | MTR_8g076820 | 45.541 | 314 | 137 | 7 | 23 | 314 | 28 | 329 | 2.54e-86 | 262 |
| MS.gene71342.t1 | MTR_5g021060 | 46.405 | 306 | 144 | 7 | 24 | 314 | 29 | 329 | 2.68e-85 | 260 |
| MS.gene71342.t1 | MTR_1g054205 | 43.807 | 331 | 165 | 9 | 1 | 315 | 1 | 326 | 5.52e-82 | 251 |
| MS.gene71342.t1 | MTR_4g074995 | 44.937 | 316 | 144 | 9 | 11 | 314 | 10 | 307 | 3.13e-81 | 249 |
| MS.gene71342.t1 | MTR_1g022970 | 45.246 | 305 | 148 | 6 | 25 | 314 | 46 | 346 | 1.88e-80 | 248 |
| MS.gene71342.t1 | MTR_2g028980 | 43.119 | 327 | 153 | 6 | 10 | 314 | 14 | 329 | 7.78e-79 | 244 |
| MS.gene71342.t1 | MTR_2g029560 | 42.105 | 323 | 162 | 7 | 10 | 314 | 9 | 324 | 4.62e-78 | 242 |
| MS.gene71342.t1 | MTR_7g093370 | 41.212 | 330 | 159 | 8 | 8 | 314 | 53 | 370 | 9.13e-78 | 242 |
| MS.gene71342.t1 | MTR_4g074990 | 43.671 | 316 | 145 | 8 | 11 | 314 | 10 | 304 | 1.41e-77 | 239 |
| MS.gene71342.t1 | MTR_2g029750 | 44.375 | 320 | 159 | 6 | 10 | 314 | 14 | 329 | 1.34e-76 | 238 |
| MS.gene71342.t1 | MTR_2g029815 | 43.302 | 321 | 163 | 7 | 9 | 314 | 13 | 329 | 4.20e-76 | 237 |
| MS.gene71342.t1 | MTR_4g122640 | 43.322 | 307 | 156 | 7 | 21 | 314 | 34 | 335 | 1.59e-75 | 235 |
| MS.gene71342.t1 | MTR_2g029800 | 42.500 | 320 | 165 | 6 | 10 | 314 | 14 | 329 | 1.34e-74 | 233 |
| MS.gene71342.t1 | MTR_2g040000 | 42.812 | 313 | 155 | 8 | 20 | 314 | 24 | 330 | 2.21e-74 | 232 |
| MS.gene71342.t1 | MTR_2g029740 | 43.218 | 317 | 161 | 6 | 10 | 311 | 14 | 326 | 3.24e-74 | 232 |
| MS.gene71342.t1 | MTR_4g031140 | 43.974 | 307 | 152 | 7 | 21 | 314 | 24 | 323 | 1.56e-73 | 230 |
| MS.gene71342.t1 | MTR_2g029860 | 41.745 | 321 | 168 | 6 | 10 | 315 | 14 | 330 | 1.65e-73 | 230 |
| MS.gene71342.t1 | MTR_4g125940 | 42.508 | 327 | 165 | 8 | 5 | 314 | 8 | 328 | 4.43e-73 | 228 |
| MS.gene71342.t1 | MTR_5g017850 | 43.769 | 329 | 159 | 11 | 4 | 314 | 5 | 325 | 4.89e-73 | 228 |
| MS.gene71342.t1 | MTR_4g030890 | 44.408 | 304 | 147 | 7 | 25 | 314 | 100 | 395 | 5.82e-73 | 231 |
| MS.gene71342.t1 | MTR_4g074980 | 42.675 | 314 | 143 | 7 | 9 | 314 | 9 | 293 | 2.61e-72 | 225 |
| MS.gene71342.t1 | MTR_2g029830 | 42.718 | 309 | 158 | 6 | 21 | 314 | 24 | 328 | 2.95e-72 | 227 |
| MS.gene71342.t1 | MTR_2g029820 | 41.875 | 320 | 167 | 6 | 10 | 314 | 14 | 329 | 4.31e-72 | 227 |
| MS.gene71342.t1 | MTR_5g017860 | 42.553 | 329 | 163 | 10 | 4 | 314 | 5 | 325 | 4.39e-72 | 226 |
| MS.gene71342.t1 | MTR_2g029850 | 43.125 | 320 | 163 | 7 | 10 | 314 | 14 | 329 | 2.32e-71 | 225 |
| MS.gene71342.t1 | MTR_5g049280 | 40.867 | 323 | 153 | 10 | 18 | 314 | 26 | 336 | 1.05e-70 | 223 |
| MS.gene71342.t1 | MTR_1g101830 | 39.755 | 327 | 158 | 10 | 10 | 314 | 12 | 321 | 2.04e-70 | 221 |
| MS.gene71342.t1 | MTR_5g014100 | 42.138 | 318 | 143 | 9 | 25 | 314 | 26 | 330 | 3.58e-70 | 221 |
| MS.gene71342.t1 | MTR_4g125940 | 46.947 | 262 | 124 | 6 | 63 | 314 | 17 | 273 | 4.45e-69 | 216 |
| MS.gene71342.t1 | MTR_2g029730 | 40.549 | 328 | 178 | 6 | 1 | 314 | 1 | 325 | 1.17e-67 | 215 |
| MS.gene71342.t1 | MTR_2g029910 | 40.994 | 322 | 170 | 8 | 10 | 315 | 15 | 332 | 1.36e-67 | 215 |
| MS.gene71342.t1 | MTR_2g029830 | 45.174 | 259 | 131 | 4 | 64 | 314 | 5 | 260 | 2.16e-67 | 213 |
| MS.gene71342.t1 | MTR_1g025980 | 38.576 | 337 | 166 | 11 | 1 | 315 | 1 | 318 | 4.67e-66 | 210 |
| MS.gene71342.t1 | MTR_1g077000 | 41.077 | 297 | 159 | 9 | 25 | 314 | 39 | 326 | 2.23e-65 | 209 |
| MS.gene71342.t1 | MTR_0155s0040 | 38.369 | 331 | 170 | 12 | 1 | 314 | 1 | 314 | 4.26e-65 | 207 |
| MS.gene71342.t1 | MTR_5g022870 | 40.000 | 320 | 167 | 12 | 9 | 314 | 7 | 315 | 1.35e-63 | 204 |
| MS.gene71342.t1 | MTR_4g074980 | 44.980 | 249 | 121 | 7 | 9 | 245 | 9 | 253 | 8.78e-63 | 199 |
| MS.gene71342.t1 | MTR_7g029030 | 39.185 | 319 | 174 | 11 | 8 | 313 | 7 | 318 | 1.29e-62 | 201 |
| MS.gene71342.t1 | MTR_3g092990 | 38.006 | 321 | 179 | 7 | 9 | 314 | 10 | 325 | 3.27e-62 | 201 |
| MS.gene71342.t1 | MTR_3g092990 | 39.048 | 315 | 173 | 8 | 9 | 314 | 10 | 314 | 4.93e-62 | 199 |
| MS.gene71342.t1 | MTR_3g072210 | 52.406 | 187 | 84 | 4 | 130 | 314 | 54 | 237 | 5.49e-61 | 194 |
| MS.gene71342.t1 | MTR_2g088770 | 40.123 | 324 | 167 | 11 | 9 | 314 | 10 | 324 | 2.96e-59 | 193 |
| MS.gene71342.t1 | MTR_5g074770 | 79.646 | 113 | 18 | 1 | 203 | 315 | 2 | 109 | 2.66e-58 | 183 |
| MS.gene71342.t1 | MTR_8g075100 | 37.421 | 318 | 158 | 11 | 19 | 314 | 20 | 318 | 2.83e-58 | 190 |
| MS.gene71342.t1 | MTR_1g038680 | 38.944 | 303 | 164 | 8 | 29 | 314 | 33 | 331 | 5.99e-58 | 189 |
| MS.gene71342.t1 | MTR_5g016010 | 35.385 | 325 | 183 | 11 | 8 | 311 | 7 | 325 | 1.40e-56 | 186 |
| MS.gene71342.t1 | MTR_6g027440 | 36.364 | 319 | 181 | 10 | 7 | 312 | 2 | 311 | 3.18e-55 | 182 |
| MS.gene71342.t1 | MTR_1g086490 | 35.629 | 334 | 189 | 6 | 4 | 314 | 9 | 339 | 3.98e-55 | 182 |
| MS.gene71342.t1 | MTR_1g009750 | 37.725 | 334 | 181 | 13 | 1 | 314 | 1 | 327 | 5.18e-55 | 182 |
| MS.gene71342.t1 | MTR_1g086320 | 35.474 | 327 | 192 | 7 | 4 | 314 | 9 | 332 | 5.43e-55 | 182 |
| MS.gene71342.t1 | MTR_4g127670 | 39.297 | 313 | 153 | 13 | 24 | 313 | 23 | 321 | 6.74e-55 | 181 |
| MS.gene71342.t1 | MTR_2g008710 | 38.538 | 301 | 157 | 10 | 29 | 311 | 31 | 321 | 3.65e-53 | 177 |
| MS.gene71342.t1 | MTR_8g062780 | 34.848 | 330 | 177 | 10 | 6 | 311 | 5 | 320 | 6.48e-53 | 176 |
| MS.gene71342.t1 | MTR_7g107520 | 37.003 | 327 | 176 | 11 | 7 | 314 | 4 | 319 | 3.58e-52 | 174 |
| MS.gene71342.t1 | MTR_1g090760 | 33.837 | 331 | 178 | 11 | 9 | 311 | 9 | 326 | 8.88e-52 | 174 |
| MS.gene71342.t1 | MTR_4g046713 | 35.366 | 328 | 187 | 9 | 1 | 311 | 3 | 322 | 1.42e-51 | 173 |
| MS.gene71342.t1 | MTR_7g086870 | 36.149 | 296 | 164 | 10 | 29 | 312 | 26 | 308 | 5.78e-51 | 171 |
| MS.gene71342.t1 | MTR_4g095450 | 36.050 | 319 | 175 | 12 | 12 | 311 | 12 | 320 | 5.84e-51 | 171 |
| MS.gene71342.t1 | MTR_2g099175 | 35.714 | 308 | 169 | 10 | 25 | 313 | 36 | 333 | 6.86e-51 | 171 |
| MS.gene71342.t1 | MTR_4g114210 | 36.170 | 329 | 165 | 12 | 12 | 313 | 8 | 318 | 1.24e-50 | 170 |
| MS.gene71342.t1 | MTR_2g008730 | 36.909 | 317 | 159 | 10 | 8 | 311 | 9 | 297 | 1.00e-49 | 167 |
| MS.gene71342.t1 | MTR_7g086820 | 34.768 | 302 | 175 | 9 | 23 | 312 | 18 | 309 | 1.51e-49 | 167 |
| MS.gene71342.t1 | MTR_4g087965 | 36.093 | 302 | 169 | 10 | 29 | 311 | 46 | 342 | 1.57e-48 | 166 |
| MS.gene71342.t1 | MTR_0286s0010 | 32.424 | 330 | 187 | 9 | 8 | 314 | 17 | 333 | 2.94e-48 | 164 |
| MS.gene71342.t1 | MTR_6g008075 | 32.424 | 330 | 187 | 9 | 8 | 314 | 17 | 333 | 2.94e-48 | 164 |
| MS.gene71342.t1 | MTR_4g133800 | 36.842 | 285 | 150 | 11 | 39 | 314 | 69 | 332 | 3.90e-48 | 164 |
| MS.gene71342.t1 | MTR_4g132490 | 32.566 | 304 | 185 | 7 | 25 | 314 | 29 | 326 | 6.18e-48 | 164 |
| MS.gene71342.t1 | MTR_2g077990 | 35.015 | 337 | 165 | 11 | 25 | 314 | 76 | 405 | 1.26e-47 | 165 |
| MS.gene71342.t1 | MTR_2g078610 | 34.421 | 337 | 167 | 11 | 25 | 314 | 76 | 405 | 6.53e-46 | 160 |
| MS.gene71342.t1 | MTR_2g067440 | 33.626 | 342 | 160 | 11 | 25 | 314 | 60 | 386 | 9.24e-46 | 159 |
| MS.gene71342.t1 | MTR_7g072490 | 40.650 | 246 | 86 | 6 | 65 | 309 | 2 | 188 | 4.09e-45 | 152 |
| MS.gene71342.t1 | MTR_1g066710 | 32.268 | 313 | 176 | 9 | 23 | 314 | 25 | 322 | 1.59e-44 | 154 |
| MS.gene71342.t1 | MTR_6g043280 | 34.839 | 310 | 163 | 12 | 25 | 314 | 41 | 331 | 3.17e-44 | 154 |
| MS.gene71342.t1 | MTR_6g043240 | 35.647 | 317 | 159 | 13 | 20 | 314 | 37 | 330 | 4.10e-44 | 154 |
| MS.gene71342.t1 | MTR_1g009750 | 34.132 | 334 | 176 | 13 | 1 | 314 | 1 | 310 | 1.67e-43 | 151 |
| MS.gene71342.t1 | MTR_6g043460 | 33.626 | 342 | 176 | 13 | 1 | 311 | 3 | 324 | 3.03e-43 | 152 |
| MS.gene71342.t1 | MTR_2g437770 | 34.268 | 321 | 176 | 12 | 15 | 314 | 34 | 340 | 6.28e-43 | 151 |
| MS.gene71342.t1 | MTR_2g067450 | 33.648 | 318 | 164 | 10 | 25 | 314 | 11 | 309 | 2.00e-42 | 149 |
| MS.gene71342.t1 | MTR_2g029880 | 43.617 | 188 | 84 | 5 | 137 | 314 | 12 | 187 | 5.52e-41 | 142 |
| MS.gene71342.t1 | MTR_1g066380 | 30.915 | 317 | 175 | 10 | 23 | 314 | 25 | 322 | 8.14e-41 | 145 |
| MS.gene71342.t1 | MTR_3g105790 | 31.940 | 335 | 187 | 8 | 1 | 311 | 1 | 318 | 2.67e-40 | 143 |
| MS.gene71342.t1 | MTR_2g078280 | 33.642 | 324 | 161 | 11 | 25 | 301 | 76 | 392 | 9.99e-40 | 144 |
| MS.gene71342.t1 | MTR_2g008160 | 32.903 | 310 | 179 | 11 | 21 | 311 | 20 | 319 | 2.39e-39 | 141 |
| MS.gene71342.t1 | MTR_1g066380 | 32.830 | 265 | 156 | 8 | 61 | 314 | 1 | 254 | 8.19e-39 | 138 |
| MS.gene71342.t1 | MTR_0147s0010 | 31.677 | 322 | 177 | 10 | 22 | 314 | 74 | 381 | 1.25e-38 | 140 |
| MS.gene71342.t1 | MTR_4g132110 | 29.721 | 323 | 205 | 9 | 1 | 311 | 12 | 324 | 1.04e-37 | 137 |
| MS.gene71342.t1 | MTR_1g066640 | 29.968 | 317 | 178 | 10 | 23 | 314 | 25 | 322 | 3.77e-37 | 135 |
| MS.gene71342.t1 | MTR_1g066680 | 29.618 | 314 | 178 | 10 | 25 | 314 | 27 | 321 | 1.99e-36 | 133 |
| MS.gene71342.t1 | MTR_5g033470 | 31.699 | 306 | 179 | 12 | 29 | 312 | 77 | 374 | 3.80e-36 | 134 |
| MS.gene71342.t1 | MTR_4g132110 | 29.268 | 328 | 205 | 10 | 1 | 311 | 12 | 329 | 2.04e-35 | 131 |
| MS.gene71342.t1 | MTR_3g105790 | 35.417 | 240 | 140 | 5 | 82 | 311 | 8 | 242 | 1.80e-33 | 124 |
| MS.gene71342.t1 | MTR_2g008160 | 30.263 | 304 | 160 | 11 | 21 | 311 | 20 | 284 | 4.03e-29 | 113 |
| MS.gene71342.t1 | MTR_2g008160 | 37.427 | 171 | 94 | 6 | 29 | 193 | 28 | 191 | 2.20e-25 | 101 |
| MS.gene71342.t1 | MTR_2g078560 | 31.878 | 229 | 113 | 7 | 125 | 314 | 95 | 319 | 3.62e-24 | 100 |
| MS.gene71342.t1 | MTR_3g462850 | 40.714 | 140 | 72 | 5 | 186 | 314 | 9 | 148 | 1.14e-23 | 95.1 |
| MS.gene71342.t1 | MTR_2g077980 | 30.104 | 289 | 151 | 11 | 71 | 314 | 1 | 283 | 1.24e-22 | 95.5 |
| MS.gene71342.t1 | MTR_4g031040 | 36.310 | 168 | 68 | 3 | 80 | 247 | 3 | 131 | 7.59e-22 | 89.7 |
| MS.gene71342.t1 | MTR_3g072260 | 45.299 | 117 | 41 | 3 | 25 | 127 | 26 | 133 | 1.37e-21 | 89.4 |
| MS.gene71342.t1 | MTR_5g058120 | 36.709 | 158 | 89 | 5 | 157 | 311 | 6 | 155 | 8.78e-20 | 87.4 |
| MS.gene71342.t1 | MTR_7g086790 | 34.737 | 190 | 105 | 8 | 66 | 254 | 17 | 188 | 1.34e-19 | 85.5 |
| MS.gene71342.t1 | MTR_6g048160 | 47.059 | 68 | 31 | 3 | 63 | 130 | 27 | 89 | 2.09e-11 | 59.7 |
| MS.gene71342.t1 | MTR_2g029930 | 38.298 | 94 | 53 | 2 | 8 | 97 | 2 | 94 | 3.53e-11 | 59.7 |
| MS.gene71342.t1 | MTR_3g107060 | 26.778 | 239 | 121 | 9 | 62 | 296 | 124 | 312 | 3.59e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71342.t1 | AT5G05340 | 54.817 | 301 | 120 | 7 | 23 | 313 | 28 | 322 | 1.97e-106 | 313 |
| MS.gene71342.t1 | AT5G58390 | 48.148 | 324 | 135 | 9 | 10 | 313 | 4 | 314 | 6.54e-93 | 279 |
| MS.gene71342.t1 | AT5G58400 | 47.840 | 324 | 137 | 9 | 9 | 313 | 13 | 323 | 4.32e-91 | 275 |
| MS.gene71342.t1 | AT5G66390 | 45.631 | 309 | 148 | 7 | 21 | 314 | 29 | 332 | 2.85e-86 | 263 |
| MS.gene71342.t1 | AT1G14540 | 45.741 | 317 | 157 | 8 | 8 | 314 | 3 | 314 | 2.99e-86 | 262 |
| MS.gene71342.t1 | AT1G14550 | 45.048 | 313 | 156 | 8 | 11 | 311 | 9 | 317 | 6.93e-85 | 258 |
| MS.gene71342.t1 | AT4G36430 | 45.246 | 305 | 147 | 7 | 25 | 314 | 30 | 329 | 7.70e-85 | 259 |
| MS.gene71342.t1 | AT2G18150 | 44.590 | 305 | 149 | 7 | 25 | 314 | 36 | 335 | 6.66e-84 | 256 |
| MS.gene71342.t1 | AT2G18140 | 44.444 | 333 | 153 | 9 | 9 | 314 | 7 | 334 | 1.03e-83 | 256 |
| MS.gene71342.t1 | AT5G06720 | 42.415 | 323 | 167 | 7 | 8 | 315 | 15 | 333 | 1.64e-80 | 248 |
| MS.gene71342.t1 | AT3G50990 | 44.951 | 307 | 149 | 8 | 23 | 314 | 39 | 340 | 4.33e-79 | 244 |
| MS.gene71342.t1 | AT1G44970 | 44.918 | 305 | 149 | 6 | 25 | 314 | 45 | 345 | 9.10e-79 | 244 |
| MS.gene71342.t1 | AT5G06730 | 40.303 | 330 | 164 | 7 | 8 | 315 | 16 | 334 | 4.56e-76 | 237 |
| MS.gene71342.t1 | AT1G68850 | 38.123 | 341 | 166 | 10 | 8 | 314 | 5 | 334 | 5.14e-74 | 231 |
| MS.gene71342.t1 | AT4G08770 | 42.453 | 318 | 148 | 8 | 21 | 314 | 20 | 326 | 1.45e-73 | 230 |
| MS.gene71342.t1 | AT2G38380 | 42.271 | 317 | 149 | 7 | 21 | 314 | 27 | 332 | 1.30e-72 | 228 |
| MS.gene71342.t1 | AT5G51890 | 39.941 | 338 | 162 | 12 | 1 | 314 | 1 | 321 | 3.66e-72 | 226 |
| MS.gene71342.t1 | AT2G38390 | 40.356 | 337 | 167 | 7 | 1 | 314 | 7 | 332 | 1.39e-71 | 225 |
| MS.gene71342.t1 | AT4G08780 | 41.195 | 318 | 152 | 8 | 21 | 314 | 20 | 326 | 1.90e-71 | 225 |
| MS.gene71342.t1 | AT1G49570 | 43.279 | 305 | 149 | 9 | 25 | 311 | 48 | 346 | 6.13e-71 | 224 |
| MS.gene71342.t1 | AT2G22420 | 38.820 | 322 | 174 | 8 | 7 | 314 | 6 | 318 | 6.64e-71 | 223 |
| MS.gene71342.t1 | AT5G19880 | 40.896 | 335 | 170 | 9 | 1 | 314 | 1 | 328 | 2.95e-70 | 221 |
| MS.gene71342.t1 | AT2G35380 | 44.268 | 314 | 142 | 10 | 25 | 314 | 30 | 334 | 2.81e-69 | 219 |
| MS.gene71342.t1 | AT3G32980 | 41.824 | 318 | 150 | 9 | 21 | 314 | 27 | 333 | 3.08e-69 | 219 |
| MS.gene71342.t1 | AT5G19890 | 43.119 | 327 | 153 | 12 | 8 | 314 | 13 | 326 | 1.10e-68 | 217 |
| MS.gene71342.t1 | AT4G16270 | 44.718 | 284 | 135 | 7 | 39 | 314 | 78 | 347 | 2.59e-68 | 217 |
| MS.gene71342.t1 | AT3G49110 | 41.824 | 318 | 150 | 9 | 21 | 314 | 29 | 335 | 4.15e-68 | 216 |
| MS.gene71342.t1 | AT5G42180 | 40.000 | 330 | 165 | 12 | 5 | 315 | 2 | 317 | 5.34e-68 | 215 |
| MS.gene71342.t1 | AT3G49120 | 41.772 | 316 | 149 | 9 | 23 | 314 | 30 | 334 | 8.94e-68 | 216 |
| MS.gene71342.t1 | AT1G71695 | 41.967 | 305 | 156 | 9 | 20 | 311 | 39 | 335 | 9.72e-64 | 205 |
| MS.gene71342.t1 | AT3G01190 | 39.514 | 329 | 171 | 11 | 1 | 312 | 1 | 318 | 1.34e-63 | 204 |
| MS.gene71342.t1 | AT4G33420 | 39.198 | 324 | 163 | 11 | 8 | 314 | 18 | 324 | 2.87e-63 | 203 |
| MS.gene71342.t1 | AT2G35380 | 47.984 | 248 | 110 | 7 | 81 | 314 | 4 | 246 | 7.31e-63 | 199 |
| MS.gene71342.t1 | AT4G33420 | 39.198 | 324 | 163 | 11 | 8 | 314 | 65 | 371 | 8.97e-63 | 203 |
| MS.gene71342.t1 | AT5G15180 | 37.730 | 326 | 169 | 11 | 10 | 314 | 16 | 328 | 2.13e-58 | 191 |
| MS.gene71342.t1 | AT5G17820 | 36.391 | 327 | 164 | 12 | 9 | 313 | 7 | 311 | 3.01e-56 | 185 |
| MS.gene71342.t1 | AT4G11290 | 36.449 | 321 | 181 | 9 | 8 | 311 | 8 | 322 | 2.30e-55 | 183 |
| MS.gene71342.t1 | AT5G17820 | 36.391 | 327 | 164 | 12 | 9 | 313 | 60 | 364 | 3.32e-55 | 184 |
| MS.gene71342.t1 | AT3G21770 | 37.778 | 315 | 171 | 10 | 14 | 311 | 18 | 324 | 2.93e-54 | 180 |
| MS.gene71342.t1 | AT1G05260 | 35.331 | 317 | 184 | 9 | 10 | 311 | 11 | 321 | 5.60e-54 | 179 |
| MS.gene71342.t1 | AT3G03670 | 35.474 | 327 | 174 | 10 | 9 | 312 | 6 | 318 | 9.21e-54 | 179 |
| MS.gene71342.t1 | AT5G40150 | 34.921 | 315 | 173 | 8 | 16 | 311 | 23 | 324 | 1.46e-53 | 178 |
| MS.gene71342.t1 | AT4G26010 | 36.624 | 314 | 179 | 11 | 8 | 312 | 4 | 306 | 1.53e-53 | 177 |
| MS.gene71342.t1 | AT4G26010 | 36.624 | 314 | 179 | 11 | 8 | 312 | 32 | 334 | 2.38e-53 | 178 |
| MS.gene71342.t1 | AT5G64120 | 38.111 | 307 | 151 | 10 | 29 | 314 | 39 | 327 | 6.86e-52 | 174 |
| MS.gene71342.t1 | AT4G37530 | 36.570 | 309 | 172 | 10 | 21 | 311 | 23 | 325 | 7.19e-52 | 174 |
| MS.gene71342.t1 | AT4G33870 | 32.000 | 350 | 165 | 11 | 23 | 314 | 66 | 400 | 4.05e-51 | 174 |
| MS.gene71342.t1 | AT1G05240 | 35.117 | 299 | 171 | 8 | 29 | 311 | 30 | 321 | 5.20e-51 | 171 |
| MS.gene71342.t1 | AT1G05250 | 35.117 | 299 | 171 | 8 | 29 | 311 | 30 | 321 | 5.20e-51 | 171 |
| MS.gene71342.t1 | AT1G34510 | 36.634 | 303 | 174 | 10 | 18 | 312 | 14 | 306 | 2.76e-50 | 169 |
| MS.gene71342.t1 | AT3G28200 | 34.098 | 305 | 170 | 8 | 25 | 311 | 21 | 312 | 2.87e-50 | 169 |
| MS.gene71342.t1 | AT1G24110 | 33.232 | 328 | 178 | 10 | 8 | 311 | 8 | 318 | 4.14e-50 | 169 |
| MS.gene71342.t1 | AT4G37520 | 36.156 | 307 | 172 | 10 | 23 | 311 | 25 | 325 | 7.69e-50 | 169 |
| MS.gene71342.t1 | AT5G14130 | 32.827 | 329 | 177 | 10 | 9 | 311 | 16 | 326 | 3.15e-49 | 167 |
| MS.gene71342.t1 | AT2G41480 | 33.333 | 336 | 176 | 12 | 9 | 314 | 10 | 327 | 5.92e-49 | 166 |
| MS.gene71342.t1 | AT5G14130 | 32.827 | 329 | 177 | 10 | 9 | 311 | 57 | 367 | 6.73e-49 | 167 |
| MS.gene71342.t1 | AT2G18980 | 35.435 | 333 | 185 | 11 | 1 | 314 | 1 | 322 | 1.74e-48 | 165 |
| MS.gene71342.t1 | AT4G37520 | 35.831 | 307 | 170 | 11 | 23 | 311 | 25 | 322 | 8.97e-48 | 163 |
| MS.gene71342.t1 | AT1G30870 | 34.936 | 312 | 175 | 10 | 18 | 313 | 44 | 343 | 1.96e-47 | 163 |
| MS.gene71342.t1 | AT4G17690 | 36.129 | 310 | 158 | 11 | 25 | 311 | 26 | 318 | 3.15e-47 | 162 |
| MS.gene71342.t1 | AT4G30170 | 36.190 | 315 | 165 | 13 | 22 | 314 | 24 | 324 | 4.31e-47 | 161 |
| MS.gene71342.t1 | AT5G47000 | 32.317 | 328 | 183 | 10 | 9 | 311 | 13 | 326 | 4.54e-47 | 161 |
| MS.gene71342.t1 | AT5G39580 | 36.250 | 320 | 179 | 12 | 10 | 314 | 9 | 318 | 7.65e-47 | 160 |
| MS.gene71342.t1 | AT5G67400 | 34.639 | 332 | 189 | 12 | 1 | 311 | 1 | 325 | 2.66e-46 | 159 |
| MS.gene71342.t1 | AT5G64100 | 36.634 | 303 | 162 | 12 | 27 | 311 | 37 | 327 | 1.12e-44 | 155 |
| MS.gene71342.t1 | AT3G49960 | 33.735 | 332 | 192 | 12 | 1 | 311 | 1 | 325 | 2.12e-44 | 154 |
| MS.gene71342.t1 | AT1G77100 | 35.494 | 324 | 175 | 12 | 8 | 311 | 6 | 315 | 3.68e-43 | 151 |
| MS.gene71342.t1 | AT2G34060 | 34.402 | 343 | 186 | 13 | 3 | 312 | 7 | 343 | 6.14e-43 | 151 |
| MS.gene71342.t1 | AT4G25980 | 31.751 | 337 | 189 | 11 | 1 | 311 | 1 | 322 | 8.38e-43 | 150 |
| MS.gene71342.t1 | AT4G37530 | 36.923 | 260 | 142 | 9 | 21 | 262 | 23 | 278 | 1.26e-42 | 148 |
| MS.gene71342.t1 | AT5G64110 | 36.202 | 337 | 163 | 14 | 11 | 314 | 12 | 329 | 1.95e-42 | 149 |
| MS.gene71342.t1 | AT5G22410 | 32.459 | 305 | 174 | 11 | 22 | 312 | 36 | 322 | 5.73e-42 | 148 |
| MS.gene71342.t1 | AT2G43480 | 33.019 | 318 | 177 | 13 | 20 | 314 | 30 | 334 | 1.25e-41 | 147 |
| MS.gene71342.t1 | AT2G24800 | 32.075 | 318 | 172 | 9 | 23 | 314 | 29 | 328 | 1.67e-41 | 147 |
| MS.gene71342.t1 | AT2G39040 | 36.422 | 313 | 167 | 12 | 25 | 314 | 46 | 349 | 2.46e-41 | 147 |
| MS.gene71342.t1 | AT5G24070 | 35.294 | 272 | 152 | 10 | 54 | 312 | 72 | 332 | 5.43e-41 | 145 |
| MS.gene71342.t1 | AT4G31760 | 29.532 | 342 | 196 | 9 | 1 | 314 | 1 | 325 | 1.15e-39 | 142 |
| MS.gene71342.t1 | AT4G21960 | 30.769 | 299 | 189 | 8 | 25 | 311 | 31 | 323 | 1.21e-38 | 139 |
| MS.gene71342.t1 | AT2G37130 | 29.712 | 313 | 187 | 8 | 22 | 314 | 27 | 326 | 3.98e-38 | 138 |
| MS.gene71342.t1 | AT3G17070 | 29.674 | 337 | 204 | 12 | 3 | 314 | 10 | 338 | 4.99e-38 | 138 |
| MS.gene71342.t1 | AT2G37130 | 29.739 | 306 | 182 | 8 | 29 | 314 | 3 | 295 | 1.29e-37 | 135 |
| MS.gene71342.t1 | AT3G17070 | 32.824 | 262 | 157 | 9 | 65 | 314 | 21 | 275 | 2.30e-33 | 124 |
| MS.gene71342.t1 | AT5G39580 | 36.232 | 207 | 113 | 9 | 10 | 209 | 9 | 203 | 2.63e-24 | 99.4 |
| MS.gene71342.t1 | AT4G25980 | 32.692 | 208 | 110 | 8 | 1 | 193 | 46 | 238 | 5.90e-24 | 99.4 |
| MS.gene71342.t1 | AT2G24800 | 35.196 | 179 | 87 | 5 | 23 | 187 | 29 | 192 | 3.34e-22 | 93.6 |
| MS.gene71342.t1 | AT4G35000 | 29.381 | 194 | 98 | 7 | 108 | 297 | 84 | 242 | 1.44e-12 | 67.4 |
| MS.gene71342.t1 | AT4G32320 | 29.148 | 223 | 99 | 8 | 85 | 296 | 147 | 321 | 5.30e-12 | 66.2 |
Find 58 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGAGGGCAACTGACTTTA+TGG | 0.101950 | 5.3:+59562676 | None:intergenic |
| TTCTGATCAACAATTGTTTA+AGG | 0.149991 | 5.3:-59560823 | MS.gene71342:CDS |
| CCTCTGATTGAATTAATATT+TGG | 0.153104 | 5.3:+59561523 | None:intergenic |
| AAAGACCTTGTAGCTCTTTC+TGG | 0.185151 | 5.3:-59561053 | MS.gene71342:CDS |
| TTGTTGTCTCCACCATTTCT+AGG | 0.241506 | 5.3:+59560927 | None:intergenic |
| TTTCTGGTGGTCACACTATA+GGG | 0.295800 | 5.3:-59561037 | MS.gene71342:CDS |
| CTTTCTGGTGGTCACACTAT+AGG | 0.303710 | 5.3:-59561038 | MS.gene71342:CDS |
| GGGAACATCAAGCCTCTTAC+TGG | 0.307586 | 5.3:-59560708 | MS.gene71342:CDS |
| TCTGATCAACAATTGTTTAA+GGG | 0.362650 | 5.3:-59560822 | MS.gene71342:CDS |
| TCGCCTTGTTTCCCAGTAAG+AGG | 0.368669 | 5.3:+59560696 | None:intergenic |
| TAAGACTTCTTTGATCAAGA+TGG | 0.398788 | 5.3:-59560730 | MS.gene71342:CDS |
| CTTAAAGATGCTGCAAAAGT+AGG | 0.404137 | 5.3:+59560960 | None:intergenic |
| ATAGAGATTTGCTATACAAA+AGG | 0.417509 | 5.3:-59560857 | MS.gene71342:CDS |
| AGGTAGTGAAAGTGACAAAT+TGG | 0.427397 | 5.3:-59560796 | MS.gene71342:CDS |
| AGGAAGACTTGTCCTAGAAA+TGG | 0.434931 | 5.3:-59560939 | MS.gene71342:CDS |
| TAGAGATTTGCTATACAAAA+GGG | 0.436085 | 5.3:-59560856 | MS.gene71342:CDS |
| AAGACTTCTTTGATCAAGAT+GGG | 0.455664 | 5.3:-59560729 | MS.gene71342:CDS |
| AAATCTCTAGCAAAAGCTAA+AGG | 0.455926 | 5.3:+59560753 | None:intergenic |
| ACAATTGTTGATCAGAATGA+AGG | 0.465894 | 5.3:+59560829 | None:intergenic |
| AATCTCTAGCAAAAGCTAAA+GGG | 0.471645 | 5.3:+59560754 | None:intergenic |
| TTATGGTTGGTAATGCTTGA+GGG | 0.474257 | 5.3:+59562693 | None:intergenic |
| TTACATTGACGAAGCAATCA+TGG | 0.486125 | 5.3:+59562631 | None:intergenic |
| GGAGTAAGCCATGCGTTGGT+AGG | 0.494219 | 5.3:+59562737 | None:intergenic |
| GATGATACCCCAAATTTCAC+TGG | 0.505975 | 5.3:-59561562 | MS.gene71342:CDS |
| AGGGCAACTGACTTTATGGT+TGG | 0.517222 | 5.3:+59562680 | None:intergenic |
| CCAAATATTAATTCAATCAG+AGG | 0.523172 | 5.3:-59561523 | MS.gene71342:CDS |
| TTAAAGATGCTGCAAAAGTA+GGG | 0.540881 | 5.3:+59560961 | None:intergenic |
| CAACAATTGTTTAAGGGACA+AGG | 0.543449 | 5.3:-59560816 | MS.gene71342:CDS |
| GAGTAAGCCATGCGTTGGTA+GGG | 0.543916 | 5.3:+59562738 | None:intergenic |
| GTCACACTATAGGGTTTGCT+AGG | 0.550006 | 5.3:-59561028 | MS.gene71342:CDS |
| TTTCTCCCCAGTGAAATTTG+GGG | 0.550604 | 5.3:+59561555 | None:intergenic |
| AGCTGTGAGAAGTTGAATGT+TGG | 0.551695 | 5.3:+59561110 | None:intergenic |
| ATTTCAAATTTCAAATCACA+AGG | 0.563348 | 5.3:-59561086 | MS.gene71342:CDS |
| TACAGAATCACGAGCTGCTG+TGG | 0.565085 | 5.3:+59561420 | None:intergenic |
| GGAACATCAAGCCTCTTACT+GGG | 0.568377 | 5.3:-59560707 | MS.gene71342:CDS |
| GAGAAGTTGAATGTTGGAGA+TGG | 0.571079 | 5.3:+59561116 | None:intergenic |
| TTTATGGTTGGTAATGCTTG+AGG | 0.580918 | 5.3:+59562692 | None:intergenic |
| AGCGTAGAAGAGATGCTTGA+GGG | 0.587390 | 5.3:+59562661 | None:intergenic |
| TAGTGAAAGTGACAAATTGG+TGG | 0.589291 | 5.3:-59560793 | MS.gene71342:CDS |
| GACCTTGTAGCTCTTTCTGG+TGG | 0.589326 | 5.3:-59561050 | MS.gene71342:CDS |
| ATATCAGCGCAAGATACCAC+AGG | 0.590740 | 5.3:+59561448 | None:intergenic |
| ATGATACCCCAAATTTCACT+GGG | 0.597994 | 5.3:-59561561 | MS.gene71342:CDS |
| ATGAGGAGTAAGCCATGCGT+TGG | 0.599175 | 5.3:+59562733 | None:intergenic |
| TATTGATCCCTACCAACGCA+TGG | 0.600690 | 5.3:-59562745 | MS.gene71342:CDS |
| AAGCCTCTTACTGGGAAACA+AGG | 0.600820 | 5.3:-59560699 | MS.gene71342:CDS |
| AAGACTTGTCCTAGAAATGG+TGG | 0.602280 | 5.3:-59560936 | MS.gene71342:CDS |
| AGATTCGACTCAATTGCAGA+AGG | 0.610654 | 5.3:-59560674 | MS.gene71342:CDS |
| ACAGTTGATAAAGTATGCAA+AGG | 0.617401 | 5.3:-59561472 | MS.gene71342:CDS |
| CTTGTAGGAGTGAAATCAAG+TGG | 0.621819 | 5.3:+59560897 | None:intergenic |
| AGACTTCTTTGATCAAGATG+GGG | 0.622644 | 5.3:-59560728 | MS.gene71342:CDS |
| AGAGATTTGCTATACAAAAG+GGG | 0.637378 | 5.3:-59560855 | MS.gene71342:CDS |
| GATTCGACTCAATTGCAGAA+GGG | 0.642604 | 5.3:-59560673 | MS.gene71342:CDS |
| GACCACCAGAAAGAGCTACA+AGG | 0.644551 | 5.3:+59561048 | None:intergenic |
| AAGCGTAGAAGAGATGCTTG+AGG | 0.681666 | 5.3:+59562660 | None:intergenic |
| TAAAGTATGCAAAGGCCCTG+TGG | 0.699533 | 5.3:-59561464 | MS.gene71342:CDS |
| TACATGTTGTAGAAACCTAG+AGG | 0.706324 | 5.3:-59562382 | MS.gene71342:intron |
| TATCAGCGCAAGATACCACA+GGG | 0.715200 | 5.3:+59561449 | None:intergenic |
| TGATACCCCAAATTTCACTG+GGG | 0.801478 | 5.3:-59561560 | MS.gene71342:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTTCAAAATTATTATTATTT+AGG | + | chr5.3:59561050-59561069 | None:intergenic | 10.0% |
| !!! | TTTGTATTTTAATTGATTTT+GGG | - | chr5.3:59561151-59561170 | MS.gene71342:CDS | 10.0% |
| !!! | TTTTGTATTTTAATTGATTT+TGG | - | chr5.3:59561150-59561169 | MS.gene71342:CDS | 10.0% |
| !! | ATTTAAAAATATGTCACAAA+AGG | + | chr5.3:59562082-59562101 | None:intergenic | 15.0% |
| !! | CTAAAATTATGTTTAATCAA+AGG | + | chr5.3:59561113-59561132 | None:intergenic | 15.0% |
| !!! | AATCTTAATTATTTTATGCT+GGG | - | chr5.3:59561468-59561487 | MS.gene71342:CDS | 15.0% |
| !!! | ATATCAATGATTGAAATTTT+AGG | - | chr5.3:59561851-59561870 | MS.gene71342:intron | 15.0% |
| !!! | TATCAATGATTGAAATTTTA+GGG | - | chr5.3:59561852-59561871 | MS.gene71342:intron | 15.0% |
| !! | AAGAAAATTATTGAAGCTAA+CGG | + | chr5.3:59561571-59561590 | None:intergenic | 20.0% |
| !! | ATTTCAAATTTCAAATCACA+AGG | - | chr5.3:59562373-59562392 | MS.gene71342:intron | 20.0% |
| !! | CAAACTTTATCATAAAAATG+AGG | + | chr5.3:59560746-59560765 | None:intergenic | 20.0% |
| !! | TATGTAACACATTAACTTTA+TGG | - | chr5.3:59560937-59560956 | MS.gene71342:CDS | 20.0% |
| !!! | ACTATAACGCTTTAAAATAA+AGG | + | chr5.3:59562182-59562201 | None:intergenic | 20.0% |
| !!! | ACTTCATTTTGAAAATTGTA+TGG | + | chr5.3:59561367-59561386 | None:intergenic | 20.0% |
| !!! | ATGTTTGAAATTGTCAATTT+AGG | + | chr5.3:59561399-59561418 | None:intergenic | 20.0% |
| !!! | GAATCTTAATTATTTTATGC+TGG | - | chr5.3:59561467-59561486 | MS.gene71342:CDS | 20.0% |
| !!! | TACAATTTTCAAAATGAAGT+TGG | - | chr5.3:59561367-59561386 | MS.gene71342:intron | 20.0% |
| !!! | TTTAAAGCGTTATAGTTTTA+CGG | - | chr5.3:59562186-59562205 | MS.gene71342:intron | 20.0% |
| ! | AACTGTTAAAAGTGACAAAA+TGG | + | chr5.3:59562238-59562257 | None:intergenic | 25.0% |
| ! | ATAATGTTAAGAGATGTTGT+AGG | + | chr5.3:59560906-59560925 | None:intergenic | 25.0% |
| ! | ATGTTGTCTTACCTAATTAT+TGG | - | chr5.3:59561545-59561564 | MS.gene71342:CDS | 25.0% |
| ! | CCAAATATTAATTCAATCAG+AGG | - | chr5.3:59561936-59561955 | MS.gene71342:intron | 25.0% |
| ! | CCTCTGATTGAATTAATATT+TGG | + | chr5.3:59561939-59561958 | None:intergenic | 25.0% |
| ! | TCTGATCAACAATTGTTTAA+GGG | - | chr5.3:59562637-59562656 | MS.gene71342:CDS | 25.0% |
| ! | TTCTGATCAACAATTGTTTA+AGG | - | chr5.3:59562636-59562655 | MS.gene71342:CDS | 25.0% |
| !! | ACTTAGACACAATCAATTTT+TGG | + | chr5.3:59561716-59561735 | None:intergenic | 25.0% |
| !! | ATTTTTCTACAATGTGCTAT+TGG | - | chr5.3:59562270-59562289 | MS.gene71342:intron | 25.0% |
| !! | TATGTATTTTCAACTCTTGT+AGG | + | chr5.3:59562580-59562599 | None:intergenic | 25.0% |
| !!! | ATAGAGATTTGCTATACAAA+AGG | - | chr5.3:59562602-59562621 | MS.gene71342:intron | 25.0% |
| !!! | ATTTTGTCACTTTTAACAGT+TGG | - | chr5.3:59562237-59562256 | MS.gene71342:intron | 25.0% |
| !!! | TAGAGATTTGCTATACAAAA+GGG | - | chr5.3:59562603-59562622 | MS.gene71342:intron | 25.0% |
| !!! | TTTTGTCACTTTTAACAGTT+GGG | - | chr5.3:59562238-59562257 | MS.gene71342:intron | 25.0% |
| !!! | TTTTTCTACAATGTGCTATT+GGG | - | chr5.3:59562271-59562290 | MS.gene71342:intron | 25.0% |
| AAAGGATAATAATCACCTCT+AGG | + | chr5.3:59561095-59561114 | None:intergenic | 30.0% | |
| AAATCTCTAGCAAAAGCTAA+AGG | + | chr5.3:59562709-59562728 | None:intergenic | 30.0% | |
| AAGACTTCTTTGATCAAGAT+GGG | - | chr5.3:59562730-59562749 | MS.gene71342:CDS | 30.0% | |
| AATCTCTAGCAAAAGCTAAA+GGG | + | chr5.3:59562708-59562727 | None:intergenic | 30.0% | |
| ACAATTGTTGATCAGAATGA+AGG | + | chr5.3:59562633-59562652 | None:intergenic | 30.0% | |
| ACGAATGTAACTAAATGCAT+TGG | - | chr5.3:59562110-59562129 | MS.gene71342:intron | 30.0% | |
| ACTAAAACCATCTTCAATGT+TGG | - | chr5.3:59561230-59561249 | MS.gene71342:intron | 30.0% | |
| AGCACATTGTAGAAAAATTG+TGG | + | chr5.3:59562268-59562287 | None:intergenic | 30.0% | |
| CTTAAAACCAACATTGAAGA+TGG | + | chr5.3:59561240-59561259 | None:intergenic | 30.0% | |
| TAAGACTTCTTTGATCAAGA+TGG | - | chr5.3:59562729-59562748 | MS.gene71342:CDS | 30.0% | |
| TGTGATTTGAATTTGCAATG+TGG | - | chr5.3:59561689-59561708 | MS.gene71342:intron | 30.0% | |
| TTAAAGATGCTGCAAAAGTA+GGG | + | chr5.3:59562501-59562520 | None:intergenic | 30.0% | |
| ! | ATTTTGTGTTTGACATGTGT+CGG | + | chr5.3:59562156-59562175 | None:intergenic | 30.0% |
| ! | GATTTTTCATATCAATGTGC+TGG | - | chr5.3:59561438-59561457 | MS.gene71342:CDS | 30.0% |
| ! | TAAATTTTGCTCCACTAGAA+GGG | - | chr5.3:59561288-59561307 | MS.gene71342:intron | 30.0% |
| ! | TTAAATTTTGCTCCACTAGA+AGG | - | chr5.3:59561287-59561306 | MS.gene71342:intron | 30.0% |
| !! | ACAGTTGATAAAGTATGCAA+AGG | - | chr5.3:59561987-59562006 | MS.gene71342:intron | 30.0% |
| !! | ACTCTTTAGTTTGAAACATG+AGG | + | chr5.3:59561652-59561671 | None:intergenic | 30.0% |
| !! | AGAGATTTGCTATACAAAAG+GGG | - | chr5.3:59562604-59562623 | MS.gene71342:intron | 30.0% |
| !!! | TTGAAATTTTAGGGTTGTGA+TGG | - | chr5.3:59561861-59561880 | MS.gene71342:intron | 30.0% |
| AAATTGTATGGATGTCCCTT+AGG | + | chr5.3:59561355-59561374 | None:intergenic | 35.0% | |
| AATTGTATGGATGTCCCTTA+GGG | + | chr5.3:59561354-59561373 | None:intergenic | 35.0% | |
| AGACTTCTTTGATCAAGATG+GGG | - | chr5.3:59562731-59562750 | MS.gene71342:CDS | 35.0% | |
| AGGTAGTGAAAGTGACAAAT+TGG | - | chr5.3:59562663-59562682 | MS.gene71342:CDS | 35.0% | |
| ATGATACCCCAAATTTCACT+GGG | - | chr5.3:59561898-59561917 | MS.gene71342:intron | 35.0% | |
| CAACAATTGTTTAAGGGACA+AGG | - | chr5.3:59562643-59562662 | MS.gene71342:CDS | 35.0% | |
| CTTAAAGATGCTGCAAAAGT+AGG | + | chr5.3:59562502-59562521 | None:intergenic | 35.0% | |
| TAAGTCAGATAAAACCGCAA+TGG | + | chr5.3:59560982-59561001 | None:intergenic | 35.0% | |
| TACATGTTGTAGAAACCTAG+AGG | - | chr5.3:59561077-59561096 | MS.gene71342:CDS | 35.0% | |
| TAGTACCATTTATGCATGCA+TGG | + | chr5.3:59561326-59561345 | None:intergenic | 35.0% | |
| TAGTGAAAGTGACAAATTGG+TGG | - | chr5.3:59562666-59562685 | MS.gene71342:CDS | 35.0% | |
| TTACATTGACGAAGCAATCA+TGG | + | chr5.3:59560831-59560850 | None:intergenic | 35.0% | |
| ! | CAAAAGGTGTACACTTACTA+TGG | + | chr5.3:59562066-59562085 | None:intergenic | 35.0% |
| ! | TCGATATTTTTCGTCCATTG+CGG | - | chr5.3:59560965-59560984 | MS.gene71342:CDS | 35.0% |
| ! | TTTTCTCCCCAGTGAAATTT+GGG | + | chr5.3:59561908-59561927 | None:intergenic | 35.0% |
| !! | CTACTTTTGCAGCATCTTTA+AGG | - | chr5.3:59562500-59562519 | MS.gene71342:intron | 35.0% |
| !! | TAAATGCATTGGTGTCGTAT+TGG | - | chr5.3:59562121-59562140 | MS.gene71342:intron | 35.0% |
| !! | TTATGGTTGGTAATGCTTGA+GGG | + | chr5.3:59560769-59560788 | None:intergenic | 35.0% |
| !! | TTTATGGTTGGTAATGCTTG+AGG | + | chr5.3:59560770-59560789 | None:intergenic | 35.0% |
| AAAGACCTTGTAGCTCTTTC+TGG | - | chr5.3:59562406-59562425 | MS.gene71342:intron | 40.0% | |
| AAGACTTGTCCTAGAAATGG+TGG | - | chr5.3:59562523-59562542 | MS.gene71342:intron | 40.0% | |
| AATGGTACTAGAGTTCCCTA+AGG | - | chr5.3:59561336-59561355 | MS.gene71342:intron | 40.0% | |
| AGATTCGACTCAATTGCAGA+AGG | - | chr5.3:59562785-59562804 | MS.gene71342:CDS | 40.0% | |
| AGCTGTGAGAAGTTGAATGT+TGG | + | chr5.3:59562352-59562371 | None:intergenic | 40.0% | |
| AGGAAGACTTGTCCTAGAAA+TGG | - | chr5.3:59562520-59562539 | MS.gene71342:intron | 40.0% | |
| ATGGTACTAGAGTTCCCTAA+GGG | - | chr5.3:59561337-59561356 | MS.gene71342:intron | 40.0% | |
| CTTGTAGGAGTGAAATCAAG+TGG | + | chr5.3:59562565-59562584 | None:intergenic | 40.0% | |
| GAAGCTAACGGCCAATAATT+AGG | + | chr5.3:59561559-59561578 | None:intergenic | 40.0% | |
| GAGAAGTTGAATGTTGGAGA+TGG | + | chr5.3:59562346-59562365 | None:intergenic | 40.0% | |
| GATCTCCATGCATGCATAAA+TGG | - | chr5.3:59561318-59561337 | MS.gene71342:intron | 40.0% | |
| GATGATACCCCAAATTTCAC+TGG | - | chr5.3:59561897-59561916 | MS.gene71342:intron | 40.0% | |
| GATTCGACTCAATTGCAGAA+GGG | - | chr5.3:59562786-59562805 | MS.gene71342:CDS | 40.0% | |
| TGATACCCCAAATTTCACTG+GGG | - | chr5.3:59561899-59561918 | MS.gene71342:intron | 40.0% | |
| TTATGCATGCATGGAGATCA+TGG | + | chr5.3:59561317-59561336 | None:intergenic | 40.0% | |
| TTGTTGTCTCCACCATTTCT+AGG | + | chr5.3:59562535-59562554 | None:intergenic | 40.0% | |
| TTTCTCCCCAGTGAAATTTG+GGG | + | chr5.3:59561907-59561926 | None:intergenic | 40.0% | |
| ! | CATATCAATGTGCTGGTGAA+TGG | - | chr5.3:59561445-59561464 | MS.gene71342:CDS | 40.0% |
| ! | GTTTTCTCCCCAGTGAAATT+TGG | + | chr5.3:59561909-59561928 | None:intergenic | 40.0% |
| ! | TTTCTGGTGGTCACACTATA+GGG | - | chr5.3:59562422-59562441 | MS.gene71342:intron | 40.0% |
| !!! | TGTCACTTTTAACAGTTGGG+AGG | - | chr5.3:59562241-59562260 | MS.gene71342:intron | 40.0% |
| AAGCCTCTTACTGGGAAACA+AGG | - | chr5.3:59562760-59562779 | MS.gene71342:CDS | 45.0% | |
| AAGCGTAGAAGAGATGCTTG+AGG | + | chr5.3:59560802-59560821 | None:intergenic | 45.0% | |
| AGCGTAGAAGAGATGCTTGA+GGG | + | chr5.3:59560801-59560820 | None:intergenic | 45.0% | |
| ATATCAGCGCAAGATACCAC+AGG | + | chr5.3:59562014-59562033 | None:intergenic | 45.0% | |
| GGAACATCAAGCCTCTTACT+GGG | - | chr5.3:59562752-59562771 | MS.gene71342:CDS | 45.0% | |
| TAAAGTATGCAAAGGCCCTG+TGG | - | chr5.3:59561995-59562014 | MS.gene71342:intron | 45.0% | |
| TATCAGCGCAAGATACCACA+GGG | + | chr5.3:59562013-59562032 | None:intergenic | 45.0% | |
| TATTGATCCCTACCAACGCA+TGG | - | chr5.3:59560714-59560733 | MS.gene71342:CDS | 45.0% | |
| ! | AGGGCAACTGACTTTATGGT+TGG | + | chr5.3:59560782-59560801 | None:intergenic | 45.0% |
| ! | CTTGAGGGCAACTGACTTTA+TGG | + | chr5.3:59560786-59560805 | None:intergenic | 45.0% |
| ! | CTTTCTGGTGGTCACACTAT+AGG | - | chr5.3:59562421-59562440 | MS.gene71342:intron | 45.0% |
| ! | GTCACACTATAGGGTTTGCT+AGG | - | chr5.3:59562431-59562450 | MS.gene71342:intron | 45.0% |
| ATGAGGAGTAAGCCATGCGT+TGG | + | chr5.3:59560729-59560748 | None:intergenic | 50.0% | |
| GACCACCAGAAAGAGCTACA+AGG | + | chr5.3:59562414-59562433 | None:intergenic | 50.0% | |
| GACCTTGTAGCTCTTTCTGG+TGG | - | chr5.3:59562409-59562428 | MS.gene71342:intron | 50.0% | |
| GATCATGGCATCCCTTCTAG+TGG | + | chr5.3:59561302-59561321 | None:intergenic | 50.0% | |
| GGGAACATCAAGCCTCTTAC+TGG | - | chr5.3:59562751-59562770 | MS.gene71342:CDS | 50.0% | |
| TACAGAATCACGAGCTGCTG+TGG | + | chr5.3:59562042-59562061 | None:intergenic | 50.0% | |
| ! | GAGTAAGCCATGCGTTGGTA+GGG | + | chr5.3:59560724-59560743 | None:intergenic | 50.0% |
| !! | TCGCCTTGTTTCCCAGTAAG+AGG | + | chr5.3:59562766-59562785 | None:intergenic | 50.0% |
| ! | GGAGTAAGCCATGCGTTGGT+AGG | + | chr5.3:59560725-59560744 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 59560665 | 59562816 | 59560665 | ID=MS.gene71342 |
| chr5.3 | mRNA | 59560665 | 59562816 | 59560665 | ID=MS.gene71342.t1;Parent=MS.gene71342 |
| chr5.3 | exon | 59562635 | 59562816 | 59562635 | ID=MS.gene71342.t1.exon1;Parent=MS.gene71342.t1 |
| chr5.3 | CDS | 59562635 | 59562816 | 59562635 | ID=cds.MS.gene71342.t1;Parent=MS.gene71342.t1 |
| chr5.3 | exon | 59562383 | 59562392 | 59562383 | ID=MS.gene71342.t1.exon2;Parent=MS.gene71342.t1 |
| chr5.3 | CDS | 59562383 | 59562392 | 59562383 | ID=cds.MS.gene71342.t1;Parent=MS.gene71342.t1 |
| chr5.3 | exon | 59561414 | 59561608 | 59561414 | ID=MS.gene71342.t1.exon3;Parent=MS.gene71342.t1 |
| chr5.3 | CDS | 59561414 | 59561608 | 59561414 | ID=cds.MS.gene71342.t1;Parent=MS.gene71342.t1 |
| chr5.3 | exon | 59560665 | 59561225 | 59560665 | ID=MS.gene71342.t1.exon4;Parent=MS.gene71342.t1 |
| chr5.3 | CDS | 59560665 | 59561225 | 59560665 | ID=cds.MS.gene71342.t1;Parent=MS.gene71342.t1 |
| Gene Sequence |
| Protein sequence |
