Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76228.t1 | KEH44312.1 | 88.4 | 827 | 85 | 1 | 1 | 827 | 1 | 816 | 0.00E+00 | 1417.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76228.t1 | Q8L5R3 | 64.3 | 826 | 281 | 4 | 3 | 827 | 9 | 821 | 2.2e-300 | 1032.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76228.t1 | A0A072VSB0 | 88.4 | 827 | 85 | 1 | 1 | 827 | 1 | 816 | 0.0e+00 | 1417.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene76228 | 0.823432 | 1.39E-53 | -1.69E-46 |
| MS.gene049283 | MS.gene76228 | 0.80623 | 9.10E-50 | -1.69E-46 |
| MS.gene050084 | MS.gene76228 | 0.835521 | 1.60E-56 | -1.69E-46 |
| MS.gene050085 | MS.gene76228 | 0.836291 | 1.02E-56 | -1.69E-46 |
| MS.gene050213 | MS.gene76228 | 0.824825 | 6.54E-54 | -1.69E-46 |
| MS.gene050224 | MS.gene76228 | 0.807195 | 5.69E-50 | -1.69E-46 |
| MS.gene050257 | MS.gene76228 | 0.819927 | 8.98E-53 | -1.69E-46 |
| MS.gene050348 | MS.gene76228 | 0.813933 | 1.99E-51 | -1.69E-46 |
| MS.gene050359 | MS.gene76228 | 0.820769 | 5.76E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene76228 | 0.821044 | 4.98E-53 | -1.69E-46 |
| MS.gene050551 | MS.gene76228 | 0.839414 | 1.61E-57 | -1.69E-46 |
| MS.gene050646 | MS.gene76228 | 0.833746 | 4.47E-56 | -1.69E-46 |
| MS.gene050838 | MS.gene76228 | 0.80225 | 6.13E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene76228 | 0.838783 | 2.34E-57 | -1.69E-46 |
| MS.gene051102 | MS.gene76228 | 0.819288 | 1.26E-52 | -1.69E-46 |
| MS.gene051234 | MS.gene76228 | 0.809535 | 1.80E-50 | -1.69E-46 |
| MS.gene051343 | MS.gene76228 | 0.849226 | 3.70E-60 | -1.69E-46 |
| MS.gene051381 | MS.gene76228 | 0.810682 | 1.02E-50 | -1.69E-46 |
| MS.gene051450 | MS.gene76228 | 0.819522 | 1.11E-52 | -1.69E-46 |
| MS.gene051676 | MS.gene76228 | 0.804704 | 1.90E-49 | -1.69E-46 |
| MS.gene052072 | MS.gene76228 | 0.817541 | 3.13E-52 | -1.69E-46 |
| MS.gene052239 | MS.gene76228 | -0.808045 | 3.76E-50 | -1.69E-46 |
| MS.gene052242 | MS.gene76228 | -0.830626 | 2.64E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene76228 | 0.876985 | 9.03E-69 | -1.69E-46 |
| MS.gene052514 | MS.gene76228 | 0.811258 | 7.66E-51 | -1.69E-46 |
| MS.gene052609 | MS.gene76228 | 0.90616 | 2.00E-80 | -1.69E-46 |
| MS.gene052775 | MS.gene76228 | 0.815307 | 9.89E-52 | -1.69E-46 |
| MS.gene052776 | MS.gene76228 | 0.860025 | 2.75E-63 | -1.69E-46 |
| MS.gene052932 | MS.gene76228 | 0.828378 | 9.30E-55 | -1.69E-46 |
| MS.gene053079 | MS.gene76228 | 0.81907 | 1.41E-52 | -1.69E-46 |
| MS.gene053143 | MS.gene76228 | 0.89452 | 2.28E-75 | -1.69E-46 |
| MS.gene053620 | MS.gene76228 | 0.822338 | 2.50E-53 | -1.69E-46 |
| MS.gene054585 | MS.gene76228 | 0.827182 | 1.80E-54 | -1.69E-46 |
| MS.gene054824 | MS.gene76228 | 0.878025 | 3.92E-69 | -1.69E-46 |
| MS.gene054892 | MS.gene76228 | 0.804358 | 2.24E-49 | -1.69E-46 |
| MS.gene054893 | MS.gene76228 | 0.806604 | 7.59E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene76228 | 0.804304 | 2.30E-49 | -1.69E-46 |
| MS.gene055469 | MS.gene76228 | 0.816436 | 5.53E-52 | -1.69E-46 |
| MS.gene055513 | MS.gene76228 | 0.824493 | 7.84E-54 | -1.69E-46 |
| MS.gene055975 | MS.gene76228 | 0.811597 | 6.46E-51 | -1.69E-46 |
| MS.gene056045 | MS.gene76228 | 0.833953 | 3.96E-56 | -1.69E-46 |
| MS.gene056097 | MS.gene76228 | 0.826898 | 2.11E-54 | -1.69E-46 |
| MS.gene056181 | MS.gene76228 | 0.821571 | 3.76E-53 | -1.69E-46 |
| MS.gene056308 | MS.gene76228 | 0.829955 | 3.85E-55 | -1.69E-46 |
| MS.gene056507 | MS.gene76228 | 0.862627 | 4.43E-64 | -1.69E-46 |
| MS.gene056519 | MS.gene76228 | 0.803477 | 3.42E-49 | -1.69E-46 |
| MS.gene056578 | MS.gene76228 | 0.830402 | 3.00E-55 | -1.69E-46 |
| MS.gene056622 | MS.gene76228 | 0.821316 | 4.31E-53 | -1.69E-46 |
| MS.gene057174 | MS.gene76228 | 0.804022 | 2.64E-49 | -1.69E-46 |
| MS.gene058289 | MS.gene76228 | 0.812299 | 4.55E-51 | -1.69E-46 |
| MS.gene058292 | MS.gene76228 | 0.829676 | 4.50E-55 | -1.69E-46 |
| MS.gene058330 | MS.gene76228 | 0.823207 | 1.57E-53 | -1.69E-46 |
| MS.gene058638 | MS.gene76228 | 0.853727 | 1.97E-61 | -1.69E-46 |
| MS.gene058639 | MS.gene76228 | 0.848502 | 5.88E-60 | -1.69E-46 |
| MS.gene058647 | MS.gene76228 | 0.801129 | 1.04E-48 | -1.69E-46 |
| MS.gene058649 | MS.gene76228 | 0.834113 | 3.62E-56 | -1.69E-46 |
| MS.gene058919 | MS.gene76228 | 0.803991 | 2.68E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene76228 | 0.867841 | 1.02E-65 | -1.69E-46 |
| MS.gene059171 | MS.gene76228 | 0.805285 | 1.44E-49 | -1.69E-46 |
| MS.gene059439 | MS.gene76228 | 0.813198 | 2.89E-51 | -1.69E-46 |
| MS.gene059778 | MS.gene76228 | 0.824771 | 6.74E-54 | -1.69E-46 |
| MS.gene05978 | MS.gene76228 | 0.80212 | 6.52E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene76228 | 0.808498 | 3.01E-50 | -1.69E-46 |
| MS.gene060343 | MS.gene76228 | -0.811033 | 8.57E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene76228 | 0.865031 | 7.93E-65 | -1.69E-46 |
| MS.gene060937 | MS.gene76228 | 0.807165 | 5.77E-50 | -1.69E-46 |
| MS.gene061006 | MS.gene76228 | 0.864921 | 8.58E-65 | -1.69E-46 |
| MS.gene061100 | MS.gene76228 | 0.84653 | 2.05E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76228.t1 | MTR_1g112130 | 92.019 | 827 | 55 | 1 | 1 | 827 | 1 | 816 | 0.0 | 1512 |
| MS.gene76228.t1 | MTR_1g112130 | 92.019 | 827 | 55 | 1 | 1 | 827 | 1 | 816 | 0.0 | 1511 |
| MS.gene76228.t1 | MTR_1g112130 | 92.019 | 827 | 55 | 1 | 1 | 827 | 1 | 816 | 0.0 | 1510 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76228.t1 | AT3G60740 | 67.079 | 808 | 248 | 5 | 23 | 827 | 29 | 821 | 0.0 | 1104 |
| MS.gene76228.t1 | AT3G60740 | 67.079 | 808 | 248 | 5 | 23 | 827 | 29 | 821 | 0.0 | 1102 |
| MS.gene76228.t1 | AT3G60740 | 66.754 | 764 | 236 | 5 | 67 | 827 | 1 | 749 | 0.0 | 1034 |
Find 158 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGATTATCTTTCAGTTTC+TGG | 0.106508 | 1.1:+79112837 | MS.gene76228:CDS |
| AGAACCTGTATGTGAGATTT+TGG | 0.224421 | 1.1:-79121064 | None:intergenic |
| CAAAGAGAATCAGTCCAATT+TGG | 0.251679 | 1.1:+79115737 | MS.gene76228:CDS |
| GTACAGAGTGTTGCTGTTAA+AGG | 0.276220 | 1.1:+79121158 | MS.gene76228:intron |
| CCGTGGAGATCCTTGCTTAC+AGG | 0.293281 | 1.1:+79119090 | MS.gene76228:CDS |
| TGACTGGTTAATAACTCATT+TGG | 0.298590 | 1.1:-79121320 | None:intergenic |
| GGCAAGTAAGCCCAATCCTT+TGG | 0.299357 | 1.1:-79114732 | None:intergenic |
| ATTGGACTGATTCTCTTTGC+TGG | 0.300760 | 1.1:-79115733 | None:intergenic |
| CCTCTTGTGTTGAGGATCAT+AGG | 0.307879 | 1.1:+79112807 | MS.gene76228:CDS |
| ATTCAAAGTAATATTTAGTT+TGG | 0.318807 | 1.1:-79115706 | None:intergenic |
| GCTATCTGGTTTGAGGGATA+TGG | 0.326090 | 1.1:+79115860 | MS.gene76228:CDS |
| TTTGACTATTCGAGGCTCTA+TGG | 0.328496 | 1.1:-79119057 | None:intergenic |
| TATACACTCATGGCGTTATA+CGG | 0.329124 | 1.1:+79114765 | MS.gene76228:CDS |
| CTTCAATGGCTCCAAGTAAC+TGG | 0.330263 | 1.1:-79113714 | None:intergenic |
| TTACTAGATTTAGATGATAA+AGG | 0.338755 | 1.1:+79121206 | MS.gene76228:CDS |
| TGAGGCAGAAGATGAGGATA+TGG | 0.341770 | 1.1:+79115800 | MS.gene76228:CDS |
| ATCATTGAGATGTTGCTATC+TGG | 0.342371 | 1.1:+79115846 | MS.gene76228:CDS |
| TGATAATGCCACTTTAGATA+TGG | 0.347076 | 1.1:-79120990 | None:intergenic |
| ATTGTTGTTCGCACCCAAAT+TGG | 0.347980 | 1.1:-79115751 | None:intergenic |
| CCTCTCCTTACAGCAGCATT+TGG | 0.364407 | 1.1:-79121272 | None:intergenic |
| ATCTGACTTGTGCATGCGCC+AGG | 0.369089 | 1.1:+79119916 | MS.gene76228:CDS |
| CAGGGTGCAACATTGGCAAC+TGG | 0.369665 | 1.1:+79119935 | MS.gene76228:CDS |
| TGCAATTATGTTCTTCCCTC+AGG | 0.369969 | 1.1:+79119983 | MS.gene76228:CDS |
| ACAACAACAGGAACAACTTT+GGG | 0.386630 | 1.1:-79118051 | None:intergenic |
| GACTGGTTAATAACTCATTT+GGG | 0.387513 | 1.1:-79121319 | None:intergenic |
| AATATACGATTGATCTGATT+TGG | 0.390348 | 1.1:-79112279 | None:intergenic |
| CGAACTTGCGGTGTCTCTAC+TGG | 0.392185 | 1.1:+79112608 | MS.gene76228:CDS |
| CACAACAACAGGAACAACTT+TGG | 0.396400 | 1.1:-79118052 | None:intergenic |
| GCACATAATTTCCAGTTACT+TGG | 0.399167 | 1.1:+79113703 | MS.gene76228:CDS |
| AAAAGTGCTTCCTTCAAGAA+TGG | 0.399315 | 1.1:+79112188 | MS.gene76228:CDS |
| CTCTTGTGTTGAGGATCATA+GGG | 0.401445 | 1.1:+79112808 | MS.gene76228:CDS |
| AAAGAGAATCAGTCCAATTT+GGG | 0.404028 | 1.1:+79115738 | MS.gene76228:CDS |
| TTGATGTAATTCCTATCGTT+TGG | 0.406554 | 1.1:+79114632 | MS.gene76228:CDS |
| AGGATCGGAGATGCGAGAAT+TGG | 0.409713 | 1.1:-79112245 | None:intergenic |
| GCATATGTATGCTGGGCATT+TGG | 0.411922 | 1.1:+79118357 | MS.gene76228:CDS |
| GCAAGTAAGCCCAATCCTTT+GGG | 0.415626 | 1.1:-79114731 | None:intergenic |
| ATGCTGCTGCATATGTATGC+TGG | 0.415728 | 1.1:+79118349 | MS.gene76228:CDS |
| TGCTGCTGCATATGTATGCT+GGG | 0.431673 | 1.1:+79118350 | MS.gene76228:CDS |
| TGAAGTTAACCCAAAGGATT+GGG | 0.436826 | 1.1:+79114722 | MS.gene76228:CDS |
| CAGGGCGAGGGTTCATGGCA+TGG | 0.439284 | 1.1:+79117970 | MS.gene76228:intron |
| TACAGAGTGTTGCTGTTAAA+GGG | 0.439297 | 1.1:+79121159 | MS.gene76228:intron |
| ATCTGTAATTTCAATTGAGT+TGG | 0.439713 | 1.1:-79115778 | None:intergenic |
| CAAAGTAATATTTAGTTTGG+TGG | 0.440003 | 1.1:-79115703 | None:intergenic |
| AATAGCAGCCAGTGCTTCAA+TGG | 0.440109 | 1.1:-79113728 | None:intergenic |
| AATACCACCTTCACAACAAC+AGG | 0.444754 | 1.1:-79118063 | None:intergenic |
| GGAATTATGCTTTCGAGATA+CGG | 0.447533 | 1.1:-79112423 | None:intergenic |
| ATACTCTAAATGAGAATTTG+AGG | 0.450365 | 1.1:+79121038 | MS.gene76228:CDS |
| GATCGAATAATGTTCATCAA+TGG | 0.456602 | 1.1:-79112447 | None:intergenic |
| AGAGGATCTGCATTGGCAAT+AGG | 0.457664 | 1.1:+79121290 | MS.gene76228:CDS |
| GCTGTAACTGTTTCTTCGCT+CGG | 0.461253 | 1.1:-79112106 | None:intergenic |
| CCTGCCGTCCAACATTCTCC+TGG | 0.461564 | 1.1:-79118592 | None:intergenic |
| ATTGCTTCAGCTTTGTCGAT+TGG | 0.462379 | 1.1:+79113647 | MS.gene76228:intron |
| CCAGGAGAATGTTGGACGGC+AGG | 0.464798 | 1.1:+79118592 | MS.gene76228:CDS |
| ATGAAGTTAACCCAAAGGAT+TGG | 0.464952 | 1.1:+79114721 | MS.gene76228:CDS |
| GATGTTGCTATCTGGTTTGA+GGG | 0.466934 | 1.1:+79115854 | MS.gene76228:CDS |
| TAGAGCCTCGAATAGTCAAA+TGG | 0.466934 | 1.1:+79119060 | MS.gene76228:CDS |
| AGAGCCTCGAATAGTCAAAT+GGG | 0.474205 | 1.1:+79119061 | MS.gene76228:CDS |
| GTGGCTATATATACTTGTAT+TGG | 0.474417 | 1.1:+79112713 | MS.gene76228:CDS |
| AGATGTTGCTATCTGGTTTG+AGG | 0.477416 | 1.1:+79115853 | MS.gene76228:CDS |
| TAATGGACGTCGAGCTGCGA+TGG | 0.480249 | 1.1:-79114683 | None:intergenic |
| GAATACACGACTATGCATAT+AGG | 0.482165 | 1.1:-79112522 | None:intergenic |
| CTGCCCCATTTGACTATTCG+AGG | 0.483443 | 1.1:-79119065 | None:intergenic |
| ATGAGTTATTAACCAGTCAA+TGG | 0.490442 | 1.1:+79121324 | MS.gene76228:CDS |
| AGGATAAAACCTCCTCAGAA+AGG | 0.493867 | 1.1:-79117457 | None:intergenic |
| ATCAGATGCTTGCGGAGTAA+TGG | 0.494080 | 1.1:-79114700 | None:intergenic |
| CGTACTTTACAAGAAAAGAA+AGG | 0.496768 | 1.1:-79119838 | None:intergenic |
| CATATTATCACACAGATATG+AGG | 0.498066 | 1.1:+79118385 | MS.gene76228:CDS |
| TGACGATGTTCCATTCTTGA+AGG | 0.500313 | 1.1:-79112198 | None:intergenic |
| AAGCACATTTCTCCATTGAC+TGG | 0.501608 | 1.1:-79121336 | None:intergenic |
| GACGTCTTCCCTTTCTGAGG+AGG | 0.501611 | 1.1:+79117448 | MS.gene76228:CDS |
| TTCTGGTCGGATGAGTACTA+TGG | 0.505921 | 1.1:+79112854 | MS.gene76228:CDS |
| TGGTCTGCAGCGAAAGGTAT+TGG | 0.507925 | 1.1:+79117407 | MS.gene76228:CDS |
| GCACGTCTTTATCGTGGAAA+GGG | 0.508234 | 1.1:+79120920 | MS.gene76228:CDS |
| CGTAGCATGCCACTGTTAAG+AGG | 0.509884 | 1.1:-79118434 | None:intergenic |
| ACTTGGAGCCATTGAAGCAC+TGG | 0.514918 | 1.1:+79113720 | MS.gene76228:CDS |
| ACAACTTTGGGAAGACTAGC+AGG | 0.518043 | 1.1:-79118039 | None:intergenic |
| CAGAAGTATCATACCTCACC+AGG | 0.520075 | 1.1:-79117500 | None:intergenic |
| TTGTGGCTGTTGTAAAATTG+AGG | 0.520626 | 1.1:+79121367 | MS.gene76228:CDS |
| GAAGAGGTCCGCATAGTGTC+GGG | 0.521843 | 1.1:+79118313 | MS.gene76228:CDS |
| GGATAAAACCTCCTCAGAAA+GGG | 0.523213 | 1.1:-79117456 | None:intergenic |
| TCAACACTAGATAAATCAAA+AGG | 0.525175 | 1.1:-79112738 | None:intergenic |
| AGGGTGCAACATTGGCAACT+GGG | 0.527754 | 1.1:+79119936 | MS.gene76228:CDS |
| GAGTGTTGCTGTTAAAGGGC+TGG | 0.528410 | 1.1:+79121163 | MS.gene76228:intron |
| GCATCCAAAATCTCACATAC+AGG | 0.530097 | 1.1:+79121060 | MS.gene76228:CDS |
| CGAAGAGGTCCGCATAGTGT+CGG | 0.532583 | 1.1:+79118312 | MS.gene76228:CDS |
| CTGATTTGGTGAACGGATGA+AGG | 0.535895 | 1.1:-79112265 | None:intergenic |
| GTACTTTACAAGAAAAGAAA+GGG | 0.536397 | 1.1:-79119837 | None:intergenic |
| AGTTGTTCCTGTTGTTGTGA+AGG | 0.536707 | 1.1:+79118056 | MS.gene76228:CDS |
| CGAAATGTGTGTTGTTGTTG+TGG | 0.537039 | 1.1:+79112694 | MS.gene76228:CDS |
| CTGATCCAAATGCTGCTGTA+AGG | 0.537199 | 1.1:+79121267 | MS.gene76228:CDS |
| CAGGAGAATGTTGGACGGCA+GGG | 0.537816 | 1.1:+79118593 | MS.gene76228:CDS |
| TTCAGTTTCGTCTTTGAGAG+AGG | 0.540960 | 1.1:+79112650 | MS.gene76228:CDS |
| CGAATAATGTTCATCAATGG+TGG | 0.541098 | 1.1:-79112444 | None:intergenic |
| GCAGCTTTCCAGGAGAATGT+TGG | 0.541201 | 1.1:+79118584 | MS.gene76228:CDS |
| ACGCATCTCCATATCTAAAG+TGG | 0.545195 | 1.1:+79120982 | MS.gene76228:CDS |
| CATGCGCCAGGGTGCAACAT+TGG | 0.546451 | 1.1:+79119928 | MS.gene76228:CDS |
| GCATGGAGGCTGCTTAGCGT+TGG | 0.548597 | 1.1:+79117987 | MS.gene76228:CDS |
| TTCGTATTGAGCGACGGAGA+TGG | 0.550956 | 1.1:-79118699 | None:intergenic |
| GGTCGGATGAGTACTATGGC+TGG | 0.551296 | 1.1:+79112858 | MS.gene76228:CDS |
| GGAAACGGTGTCGTTGAGGA+AGG | 0.553070 | 1.1:-79112224 | None:intergenic |
| TTCCTCATCGTATACACTCA+TGG | 0.553667 | 1.1:+79114755 | MS.gene76228:CDS |
| CATGAGAGAACTTGCTGCAG+AGG | 0.556855 | 1.1:+79119814 | MS.gene76228:CDS |
| AATTGGAAACGGTGTCGTTG+AGG | 0.557803 | 1.1:-79112228 | None:intergenic |
| AGATTGTACCTCTTGTGTTG+AGG | 0.559312 | 1.1:+79112799 | MS.gene76228:CDS |
| TCTTTGAGAGAGGAAAGTAC+TGG | 0.562349 | 1.1:+79112660 | MS.gene76228:CDS |
| AGCACGTCTTTATCGTGGAA+AGG | 0.563167 | 1.1:+79120919 | MS.gene76228:CDS |
| GTCCGTTGGTCTGCAGCGAA+AGG | 0.563885 | 1.1:+79117401 | MS.gene76228:CDS |
| TTGGTGAACGGATGAAGGAT+CGG | 0.575098 | 1.1:-79112260 | None:intergenic |
| TACAGATGAGGCAGAAGATG+AGG | 0.575639 | 1.1:+79115794 | MS.gene76228:CDS |
| ATTATCTTTCAGTTTCTGGT+CGG | 0.576574 | 1.1:+79112841 | MS.gene76228:CDS |
| TACCTTTCGCTGCAGACCAA+CGG | 0.577331 | 1.1:-79117403 | None:intergenic |
| TGTAGAACACTGTTGTCCGT+TGG | 0.577807 | 1.1:+79117387 | MS.gene76228:intron |
| AGTTTCTGATCTCGAACTTG+CGG | 0.578941 | 1.1:+79112596 | MS.gene76228:CDS |
| TTTATAAGCAGGCAGGCAGT+CGG | 0.587442 | 1.1:+79114599 | MS.gene76228:intron |
| TTGGCTGAACTTTCTCGTAG+AGG | 0.588332 | 1.1:+79118006 | MS.gene76228:CDS |
| AGTCAAATGGGGCAGTCCCG+TGG | 0.588964 | 1.1:+79119073 | MS.gene76228:CDS |
| CTCAATTGAAATTACAGATG+AGG | 0.588966 | 1.1:+79115782 | MS.gene76228:CDS |
| CGATCAAAATCAATCGAACT+CGG | 0.589986 | 1.1:+79112465 | MS.gene76228:CDS |
| ATCTGATGAAGTTAACCCAA+AGG | 0.590595 | 1.1:+79114716 | MS.gene76228:CDS |
| TTTGACGTCTTCCCTTTCTG+AGG | 0.591409 | 1.1:+79117445 | MS.gene76228:CDS |
| AAGTCAGATGAAAGAGTACA+AGG | 0.594785 | 1.1:-79119902 | None:intergenic |
| ATCTCCGTCGCTCAATACGA+AGG | 0.596338 | 1.1:+79118701 | MS.gene76228:CDS |
| CTAAATCTAGTAAGTAAGCA+CGG | 0.599471 | 1.1:-79121196 | None:intergenic |
| GATTGATCTGATTTGGTGAA+CGG | 0.601059 | 1.1:-79112272 | None:intergenic |
| GAAGCCAATACCTGTAAGCA+AGG | 0.603509 | 1.1:-79119100 | None:intergenic |
| CCTATGATCCTCAACACAAG+AGG | 0.606374 | 1.1:-79112807 | None:intergenic |
| ACTATTCGAGGCTCTATGGA+CGG | 0.610178 | 1.1:-79119053 | None:intergenic |
| CGGCAGGGAAATTATCCGCA+TGG | 0.611227 | 1.1:+79118608 | MS.gene76228:CDS |
| CGTCTTTATCGTGGAAAGGG+AGG | 0.611257 | 1.1:+79120923 | MS.gene76228:CDS |
| GGAGATGCGAGAATTGGAAA+CGG | 0.612366 | 1.1:-79112239 | None:intergenic |
| TTAACTTCATCAGATGCTTG+CGG | 0.613349 | 1.1:-79114708 | None:intergenic |
| TATTCAGTTATCAAAGTCTG+TGG | 0.626475 | 1.1:+79112540 | MS.gene76228:CDS |
| ATGGATAAGTATCAAGAGCA+AGG | 0.628248 | 1.1:+79112387 | MS.gene76228:CDS |
| TCGAGATCAGAAACTTGATG+TGG | 0.629587 | 1.1:-79112588 | None:intergenic |
| GGGTGCAACATTGGCAACTG+GGG | 0.630222 | 1.1:+79119937 | MS.gene76228:CDS |
| CAGTTGCCAATGTTGCACCC+TGG | 0.631333 | 1.1:-79119934 | None:intergenic |
| TGTAAGGAGAGGATCTGCAT+TGG | 0.632563 | 1.1:+79121283 | MS.gene76228:CDS |
| CATGCCACTGTTAAGAGGTG+CGG | 0.634247 | 1.1:-79118429 | None:intergenic |
| GAAGTGTCGTTCCAAACGAT+AGG | 0.635423 | 1.1:-79114643 | None:intergenic |
| CTGTAAGCAAGGATCTCCAC+GGG | 0.637714 | 1.1:-79119089 | None:intergenic |
| GGCGAGGGTTCATGGCATGG+AGG | 0.638162 | 1.1:+79117973 | MS.gene76228:CDS |
| CCAAATGCTGCTGTAAGGAG+AGG | 0.638562 | 1.1:+79121272 | MS.gene76228:CDS |
| TCTGACTTGTGCATGCGCCA+GGG | 0.638598 | 1.1:+79119917 | MS.gene76228:CDS |
| CGCCATGAGTGTATACGATG+AGG | 0.642907 | 1.1:-79114757 | None:intergenic |
| ATGAGTGTATACGATGAGGA+AGG | 0.642958 | 1.1:-79114753 | None:intergenic |
| CCTGTAAGCAAGGATCTCCA+CGG | 0.648200 | 1.1:-79119090 | None:intergenic |
| ACATTAGACCCGACACTATG+CGG | 0.661051 | 1.1:-79118321 | None:intergenic |
| CTTTGTCGATTGGACACACG+AGG | 0.669582 | 1.1:+79113657 | MS.gene76228:CDS |
| CTGCATTACGATGTTCGAAG+AGG | 0.669783 | 1.1:+79118297 | MS.gene76228:CDS |
| ATATCCTTCGTATTGAGCGA+CGG | 0.671733 | 1.1:-79118705 | None:intergenic |
| TGAAAACAGCTCCAAAACAG+AGG | 0.672305 | 1.1:-79117477 | None:intergenic |
| CTTTCCAGGAGAATGTTGGA+CGG | 0.674974 | 1.1:+79118588 | MS.gene76228:CDS |
| CGAAGAAACAGTTACAGCGA+CGG | 0.682817 | 1.1:+79112111 | MS.gene76228:CDS |
| GAGCCTCGAATAGTCAAATG+GGG | 0.690557 | 1.1:+79119062 | MS.gene76228:CDS |
| ACAGCACTCGCAAAATACTG+AGG | 0.708253 | 1.1:-79119863 | None:intergenic |
| TGCTCCGCACCTCTTAACAG+TGG | 0.708690 | 1.1:+79118425 | MS.gene76228:CDS |
| TTCACAATGTCAATGCCATG+CGG | 0.709541 | 1.1:-79118623 | None:intergenic |
| AGTGGCATGCTACGACCGTG+AGG | 0.715403 | 1.1:+79118443 | MS.gene76228:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 79112097 | 79121388 | 79112097 | ID=MS.gene76228 |
| chr1.1 | mRNA | 79112097 | 79121388 | 79112097 | ID=MS.gene76228.t1;Parent=MS.gene76228 |
| chr1.1 | exon | 79112097 | 79112294 | 79112097 | ID=MS.gene76228.t1.exon1;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79112097 | 79112294 | 79112097 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79112387 | 79112934 | 79112387 | ID=MS.gene76228.t1.exon2;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79112387 | 79112934 | 79112387 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79113657 | 79113756 | 79113657 | ID=MS.gene76228.t1.exon3;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79113657 | 79113756 | 79113657 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79114610 | 79114786 | 79114610 | ID=MS.gene76228.t1.exon4;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79114610 | 79114786 | 79114610 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79115696 | 79115881 | 79115696 | ID=MS.gene76228.t1.exon5;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79115696 | 79115881 | 79115696 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79117392 | 79117508 | 79117392 | ID=MS.gene76228.t1.exon6;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79117392 | 79117508 | 79117392 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79117973 | 79118077 | 79117973 | ID=MS.gene76228.t1.exon7;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79117973 | 79118077 | 79117973 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79118294 | 79118464 | 79118294 | ID=MS.gene76228.t1.exon8;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79118294 | 79118464 | 79118294 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79118560 | 79118739 | 79118560 | ID=MS.gene76228.t1.exon9;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79118560 | 79118739 | 79118560 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79119043 | 79119111 | 79119043 | ID=MS.gene76228.t1.exon10;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79119043 | 79119111 | 79119043 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79119806 | 79120004 | 79119806 | ID=MS.gene76228.t1.exon11;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79119806 | 79120004 | 79119806 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79120876 | 79121081 | 79120876 | ID=MS.gene76228.t1.exon12;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79120876 | 79121081 | 79120876 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| chr1.1 | exon | 79121164 | 79121388 | 79121164 | ID=MS.gene76228.t1.exon13;Parent=MS.gene76228.t1 |
| chr1.1 | CDS | 79121164 | 79121388 | 79121164 | ID=cds.MS.gene76228.t1;Parent=MS.gene76228.t1 |
| Gene Sequence |
| Protein sequence |
