Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77032.t1 | RHN59427.1 | 91.9 | 321 | 26 | 0 | 1 | 321 | 33 | 353 | 5.00E-167 | 597 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77032.t1 | Q9FLC0 | 58.6 | 326 | 128 | 4 | 1 | 321 | 1 | 324 | 4.2e-98 | 359.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77032.t1 | A0A072UHR9 | 91.9 | 321 | 26 | 0 | 1 | 321 | 1 | 321 | 3.6e-167 | 597.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene77032 | -0.806134 | 9.54E-50 | -1.69E-46 |
| MS.gene049549 | MS.gene77032 | 0.83533 | 1.79E-56 | -1.69E-46 |
| MS.gene049634 | MS.gene77032 | 0.810958 | 8.90E-51 | -1.69E-46 |
| MS.gene050095 | MS.gene77032 | 0.806557 | 7.77E-50 | -1.69E-46 |
| MS.gene050096 | MS.gene77032 | 0.85032 | 1.83E-60 | -1.69E-46 |
| MS.gene050647 | MS.gene77032 | 0.822036 | 2.94E-53 | -1.69E-46 |
| MS.gene05079 | MS.gene77032 | 0.806291 | 8.83E-50 | -1.69E-46 |
| MS.gene05104 | MS.gene77032 | 0.806269 | 8.93E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene77032 | -0.803882 | 2.82E-49 | -1.69E-46 |
| MS.gene051131 | MS.gene77032 | 0.828337 | 9.51E-55 | -1.69E-46 |
| MS.gene051138 | MS.gene77032 | 0.808208 | 3.47E-50 | -1.69E-46 |
| MS.gene051907 | MS.gene77032 | 0.808679 | 2.75E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene77032 | 0.839827 | 1.26E-57 | -1.69E-46 |
| MS.gene05240 | MS.gene77032 | 0.860824 | 1.58E-63 | -1.69E-46 |
| MS.gene05244 | MS.gene77032 | 0.855084 | 8.00E-62 | -1.69E-46 |
| MS.gene052606 | MS.gene77032 | 0.81886 | 1.57E-52 | -1.69E-46 |
| MS.gene052702 | MS.gene77032 | 0.802775 | 4.78E-49 | -1.69E-46 |
| MS.gene053030 | MS.gene77032 | 0.815698 | 8.09E-52 | -1.69E-46 |
| MS.gene053031 | MS.gene77032 | 0.863157 | 3.04E-64 | -1.69E-46 |
| MS.gene053033 | MS.gene77032 | 0.832009 | 1.21E-55 | -1.69E-46 |
| MS.gene053403 | MS.gene77032 | 0.803088 | 4.12E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene77032 | 0.84516 | 4.83E-59 | -1.69E-46 |
| MS.gene053420 | MS.gene77032 | 0.808409 | 3.14E-50 | -1.69E-46 |
| MS.gene054146 | MS.gene77032 | 0.833958 | 3.95E-56 | -1.69E-46 |
| MS.gene054181 | MS.gene77032 | 0.818845 | 1.58E-52 | -1.69E-46 |
| MS.gene054290 | MS.gene77032 | 0.815913 | 7.25E-52 | -1.69E-46 |
| MS.gene054421 | MS.gene77032 | 0.819863 | 9.29E-53 | -1.69E-46 |
| MS.gene054742 | MS.gene77032 | 0.817884 | 2.62E-52 | -1.69E-46 |
| MS.gene05483 | MS.gene77032 | 0.831456 | 1.65E-55 | -1.69E-46 |
| MS.gene055124 | MS.gene77032 | 0.81894 | 1.51E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene77032 | 0.81446 | 1.52E-51 | -1.69E-46 |
| MS.gene055240 | MS.gene77032 | 0.825888 | 3.67E-54 | -1.69E-46 |
| MS.gene056218 | MS.gene77032 | 0.829984 | 3.79E-55 | -1.69E-46 |
| MS.gene056224 | MS.gene77032 | 0.80781 | 4.21E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene77032 | 0.822954 | 1.80E-53 | -1.69E-46 |
| MS.gene056591 | MS.gene77032 | 0.82299 | 1.76E-53 | -1.69E-46 |
| MS.gene056748 | MS.gene77032 | 0.827761 | 1.31E-54 | -1.69E-46 |
| MS.gene056856 | MS.gene77032 | 0.841504 | 4.56E-58 | -1.69E-46 |
| MS.gene056920 | MS.gene77032 | 0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene057544 | MS.gene77032 | 0.821051 | 4.96E-53 | -1.69E-46 |
| MS.gene058603 | MS.gene77032 | 0.842865 | 1.99E-58 | -1.69E-46 |
| MS.gene059402 | MS.gene77032 | 0.829196 | 5.89E-55 | -1.69E-46 |
| MS.gene059536 | MS.gene77032 | -0.808169 | 3.53E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene77032 | -0.800665 | 1.30E-48 | -1.69E-46 |
| MS.gene059953 | MS.gene77032 | 0.847296 | 1.27E-59 | -1.69E-46 |
| MS.gene059955 | MS.gene77032 | 0.846929 | 1.59E-59 | -1.69E-46 |
| MS.gene060087 | MS.gene77032 | 0.805998 | 1.02E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77032.t1 | MTR_4g029170 | 91.277 | 321 | 28 | 0 | 1 | 321 | 1 | 321 | 0.0 | 616 |
| MS.gene77032.t1 | MTR_4g029180 | 91.900 | 321 | 26 | 0 | 1 | 321 | 1 | 321 | 0.0 | 588 |
| MS.gene77032.t1 | MTR_5g074710 | 62.145 | 317 | 114 | 4 | 9 | 321 | 7 | 321 | 2.33e-138 | 395 |
| MS.gene77032.t1 | MTR_5g074740 | 60.615 | 325 | 120 | 5 | 1 | 321 | 1 | 321 | 3.59e-136 | 389 |
| MS.gene77032.t1 | MTR_5g074760 | 59.692 | 325 | 123 | 5 | 1 | 321 | 1 | 321 | 8.65e-135 | 385 |
| MS.gene77032.t1 | MTR_5g074860 | 60.252 | 317 | 117 | 5 | 11 | 320 | 10 | 324 | 4.54e-133 | 381 |
| MS.gene77032.t1 | MTR_5g074970 | 59.443 | 323 | 127 | 2 | 2 | 321 | 5 | 326 | 6.85e-131 | 376 |
| MS.gene77032.t1 | MTR_3g466200 | 59.236 | 314 | 124 | 3 | 11 | 321 | 8 | 320 | 6.21e-127 | 365 |
| MS.gene77032.t1 | MTR_3g072190 | 58.025 | 324 | 127 | 5 | 1 | 321 | 1 | 318 | 2.00e-124 | 359 |
| MS.gene77032.t1 | MTR_3g094650 | 55.414 | 314 | 136 | 3 | 10 | 321 | 11 | 322 | 1.06e-121 | 352 |
| MS.gene77032.t1 | MTR_4g029200 | 56.494 | 308 | 132 | 2 | 14 | 321 | 33 | 338 | 3.22e-121 | 352 |
| MS.gene77032.t1 | MTR_3g467600 | 55.828 | 326 | 137 | 5 | 1 | 321 | 1 | 324 | 4.59e-121 | 351 |
| MS.gene77032.t1 | MTR_5g083860 | 54.952 | 313 | 136 | 4 | 11 | 321 | 16 | 325 | 7.60e-120 | 348 |
| MS.gene77032.t1 | MTR_7g072480 | 56.774 | 310 | 132 | 2 | 12 | 321 | 9 | 316 | 8.87e-118 | 342 |
| MS.gene77032.t1 | MTR_2g084020 | 55.096 | 314 | 138 | 3 | 9 | 321 | 7 | 318 | 1.83e-117 | 342 |
| MS.gene77032.t1 | MTR_7g072510 | 55.932 | 295 | 128 | 2 | 27 | 321 | 20 | 312 | 3.31e-117 | 340 |
| MS.gene77032.t1 | MTR_3g094630 | 58.013 | 312 | 126 | 4 | 13 | 321 | 13 | 322 | 1.72e-116 | 339 |
| MS.gene77032.t1 | MTR_4g083710 | 53.374 | 326 | 145 | 5 | 1 | 321 | 1 | 324 | 9.65e-116 | 337 |
| MS.gene77032.t1 | MTR_3g466180 | 54.829 | 321 | 143 | 2 | 1 | 321 | 5 | 323 | 1.38e-115 | 337 |
| MS.gene77032.t1 | MTR_2g084000 | 54.921 | 315 | 138 | 4 | 9 | 321 | 7 | 319 | 2.45e-115 | 336 |
| MS.gene77032.t1 | MTR_2g084080 | 52.532 | 316 | 148 | 2 | 6 | 321 | 4 | 317 | 2.92e-115 | 336 |
| MS.gene77032.t1 | MTR_3g094670 | 55.247 | 324 | 140 | 4 | 1 | 321 | 1 | 322 | 1.98e-114 | 334 |
| MS.gene77032.t1 | MTR_2g084110 | 52.848 | 316 | 147 | 2 | 6 | 321 | 4 | 317 | 2.47e-114 | 333 |
| MS.gene77032.t1 | MTR_2g084010 | 53.822 | 314 | 142 | 3 | 9 | 321 | 7 | 318 | 9.90e-114 | 332 |
| MS.gene77032.t1 | MTR_2g084090 | 51.735 | 317 | 150 | 3 | 6 | 321 | 4 | 318 | 1.99e-111 | 326 |
| MS.gene77032.t1 | MTR_5g021060 | 55.116 | 303 | 126 | 4 | 27 | 321 | 30 | 330 | 1.47e-110 | 324 |
| MS.gene77032.t1 | MTR_4g029190 | 54.949 | 293 | 128 | 3 | 31 | 321 | 50 | 340 | 9.74e-110 | 323 |
| MS.gene77032.t1 | MTR_4g074995 | 52.716 | 313 | 128 | 5 | 14 | 321 | 11 | 308 | 1.08e-109 | 321 |
| MS.gene77032.t1 | MTR_1g115900 | 51.447 | 311 | 145 | 4 | 14 | 321 | 14 | 321 | 4.21e-108 | 318 |
| MS.gene77032.t1 | MTR_7g026990 | 52.396 | 313 | 146 | 3 | 9 | 321 | 13 | 322 | 2.59e-107 | 316 |
| MS.gene77032.t1 | MTR_8g076820 | 54.098 | 305 | 130 | 4 | 25 | 321 | 28 | 330 | 4.48e-107 | 315 |
| MS.gene77032.t1 | MTR_5g074860 | 51.258 | 318 | 107 | 6 | 10 | 320 | 9 | 285 | 1.25e-103 | 305 |
| MS.gene77032.t1 | MTR_3g072190 | 61.111 | 252 | 96 | 2 | 70 | 321 | 2 | 251 | 1.74e-102 | 301 |
| MS.gene77032.t1 | MTR_4g074990 | 49.226 | 323 | 141 | 6 | 3 | 321 | 2 | 305 | 1.85e-102 | 303 |
| MS.gene77032.t1 | MTR_1g022970 | 51.148 | 305 | 138 | 4 | 26 | 321 | 45 | 347 | 1.69e-100 | 299 |
| MS.gene77032.t1 | MTR_4g125940 | 49.394 | 330 | 152 | 5 | 3 | 321 | 4 | 329 | 5.30e-99 | 295 |
| MS.gene77032.t1 | MTR_7g093370 | 46.224 | 331 | 164 | 6 | 1 | 321 | 45 | 371 | 3.33e-98 | 294 |
| MS.gene77032.t1 | MTR_1g054205 | 47.059 | 323 | 155 | 6 | 9 | 321 | 10 | 326 | 4.69e-97 | 290 |
| MS.gene77032.t1 | MTR_4g122640 | 49.186 | 307 | 148 | 4 | 21 | 321 | 32 | 336 | 1.28e-96 | 289 |
| MS.gene77032.t1 | MTR_2g028980 | 48.193 | 332 | 159 | 5 | 1 | 321 | 1 | 330 | 3.26e-96 | 289 |
| MS.gene77032.t1 | MTR_2g029815 | 46.914 | 324 | 161 | 4 | 7 | 321 | 9 | 330 | 1.72e-95 | 287 |
| MS.gene77032.t1 | MTR_5g017850 | 46.417 | 321 | 161 | 4 | 9 | 321 | 9 | 326 | 2.49e-95 | 285 |
| MS.gene77032.t1 | MTR_2g029800 | 47.170 | 318 | 157 | 4 | 13 | 321 | 15 | 330 | 1.82e-94 | 284 |
| MS.gene77032.t1 | MTR_2g040000 | 48.534 | 307 | 142 | 5 | 27 | 321 | 29 | 331 | 5.38e-94 | 282 |
| MS.gene77032.t1 | MTR_2g029820 | 47.003 | 317 | 157 | 4 | 14 | 321 | 16 | 330 | 8.86e-94 | 283 |
| MS.gene77032.t1 | MTR_5g014100 | 49.515 | 309 | 139 | 5 | 27 | 321 | 26 | 331 | 1.94e-93 | 281 |
| MS.gene77032.t1 | MTR_2g029750 | 45.912 | 318 | 161 | 4 | 13 | 321 | 15 | 330 | 2.60e-93 | 281 |
| MS.gene77032.t1 | MTR_2g029850 | 47.799 | 318 | 155 | 4 | 13 | 321 | 15 | 330 | 1.20e-92 | 280 |
| MS.gene77032.t1 | MTR_5g017860 | 45.171 | 321 | 165 | 4 | 9 | 321 | 9 | 326 | 1.73e-92 | 278 |
| MS.gene77032.t1 | MTR_4g074980 | 47.040 | 321 | 140 | 9 | 3 | 321 | 2 | 294 | 1.77e-92 | 277 |
| MS.gene77032.t1 | MTR_2g029860 | 45.963 | 322 | 161 | 5 | 11 | 321 | 11 | 330 | 6.13e-92 | 278 |
| MS.gene77032.t1 | MTR_2g029560 | 46.178 | 314 | 158 | 4 | 17 | 321 | 14 | 325 | 1.01e-91 | 277 |
| MS.gene77032.t1 | MTR_2g029910 | 47.335 | 319 | 156 | 5 | 13 | 321 | 16 | 332 | 1.34e-91 | 277 |
| MS.gene77032.t1 | MTR_2g029830 | 48.355 | 304 | 146 | 4 | 27 | 321 | 28 | 329 | 1.85e-91 | 276 |
| MS.gene77032.t1 | MTR_2g029740 | 45.597 | 318 | 162 | 4 | 13 | 321 | 15 | 330 | 1.49e-90 | 274 |
| MS.gene77032.t1 | MTR_5g049280 | 47.231 | 307 | 148 | 6 | 27 | 321 | 33 | 337 | 1.52e-90 | 274 |
| MS.gene77032.t1 | MTR_4g030890 | 47.896 | 309 | 149 | 5 | 20 | 321 | 93 | 396 | 8.85e-89 | 272 |
| MS.gene77032.t1 | MTR_4g125940 | 52.347 | 277 | 117 | 5 | 56 | 321 | 2 | 274 | 8.64e-88 | 265 |
| MS.gene77032.t1 | MTR_2g029730 | 45.912 | 318 | 161 | 4 | 13 | 321 | 11 | 326 | 2.22e-87 | 266 |
| MS.gene77032.t1 | MTR_4g074980 | 53.125 | 256 | 111 | 6 | 3 | 253 | 2 | 253 | 2.66e-86 | 260 |
| MS.gene77032.t1 | MTR_4g031140 | 45.277 | 307 | 156 | 5 | 22 | 321 | 23 | 324 | 1.24e-84 | 259 |
| MS.gene77032.t1 | MTR_2g088770 | 42.368 | 321 | 172 | 7 | 10 | 321 | 9 | 325 | 1.61e-82 | 253 |
| MS.gene77032.t1 | MTR_8g075100 | 43.322 | 307 | 159 | 7 | 22 | 321 | 21 | 319 | 7.21e-80 | 246 |
| MS.gene77032.t1 | MTR_1g101830 | 40.854 | 328 | 178 | 7 | 1 | 321 | 4 | 322 | 1.12e-78 | 243 |
| MS.gene77032.t1 | MTR_5g022870 | 42.006 | 319 | 169 | 8 | 10 | 321 | 7 | 316 | 1.24e-78 | 243 |
| MS.gene77032.t1 | MTR_5g074700 | 55.702 | 228 | 85 | 5 | 96 | 321 | 1 | 214 | 1.63e-78 | 239 |
| MS.gene77032.t1 | MTR_1g086320 | 41.994 | 331 | 177 | 6 | 4 | 321 | 5 | 333 | 1.81e-77 | 240 |
| MS.gene77032.t1 | MTR_0155s0040 | 40.940 | 298 | 168 | 6 | 25 | 321 | 25 | 315 | 8.04e-77 | 238 |
| MS.gene77032.t1 | MTR_2g008710 | 40.979 | 327 | 174 | 7 | 7 | 321 | 6 | 325 | 2.40e-76 | 237 |
| MS.gene77032.t1 | MTR_1g025980 | 41.824 | 318 | 172 | 7 | 9 | 319 | 7 | 318 | 2.84e-76 | 236 |
| MS.gene77032.t1 | MTR_4g046713 | 38.906 | 329 | 188 | 6 | 1 | 321 | 3 | 326 | 1.16e-75 | 235 |
| MS.gene77032.t1 | MTR_1g086490 | 41.888 | 339 | 173 | 7 | 4 | 321 | 5 | 340 | 1.85e-75 | 235 |
| MS.gene77032.t1 | MTR_3g092990 | 39.873 | 316 | 180 | 4 | 14 | 321 | 13 | 326 | 5.33e-75 | 233 |
| MS.gene77032.t1 | MTR_2g029830 | 48.837 | 258 | 121 | 4 | 73 | 321 | 6 | 261 | 2.19e-74 | 231 |
| MS.gene77032.t1 | MTR_1g009750 | 41.088 | 331 | 182 | 7 | 1 | 321 | 1 | 328 | 2.29e-74 | 232 |
| MS.gene77032.t1 | MTR_7g029030 | 39.937 | 318 | 183 | 6 | 9 | 321 | 6 | 320 | 4.24e-74 | 231 |
| MS.gene77032.t1 | MTR_1g077000 | 41.554 | 296 | 165 | 6 | 27 | 321 | 39 | 327 | 4.39e-74 | 231 |
| MS.gene77032.t1 | MTR_7g086870 | 40.878 | 296 | 168 | 5 | 27 | 321 | 22 | 311 | 1.33e-73 | 229 |
| MS.gene77032.t1 | MTR_4g114210 | 40.938 | 320 | 170 | 6 | 14 | 321 | 8 | 320 | 1.16e-71 | 225 |
| MS.gene77032.t1 | MTR_1g038680 | 41.060 | 302 | 165 | 6 | 31 | 321 | 33 | 332 | 4.38e-69 | 218 |
| MS.gene77032.t1 | MTR_4g087965 | 41.265 | 332 | 172 | 9 | 7 | 317 | 13 | 342 | 2.66e-68 | 217 |
| MS.gene77032.t1 | MTR_6g027440 | 36.792 | 318 | 185 | 7 | 9 | 321 | 8 | 314 | 4.45e-68 | 216 |
| MS.gene77032.t1 | MTR_1g090760 | 38.906 | 329 | 186 | 7 | 6 | 321 | 4 | 330 | 6.95e-68 | 216 |
| MS.gene77032.t1 | MTR_4g127670 | 41.447 | 304 | 165 | 6 | 27 | 321 | 24 | 323 | 7.38e-68 | 215 |
| MS.gene77032.t1 | MTR_4g095450 | 38.629 | 321 | 192 | 4 | 1 | 317 | 1 | 320 | 8.40e-68 | 215 |
| MS.gene77032.t1 | MTR_5g016010 | 37.267 | 322 | 183 | 6 | 6 | 317 | 13 | 325 | 8.81e-68 | 215 |
| MS.gene77032.t1 | MTR_4g133800 | 37.647 | 340 | 177 | 9 | 6 | 321 | 5 | 333 | 1.66e-67 | 214 |
| MS.gene77032.t1 | MTR_7g107520 | 37.963 | 324 | 187 | 7 | 5 | 321 | 4 | 320 | 2.44e-67 | 214 |
| MS.gene77032.t1 | MTR_7g086820 | 37.294 | 303 | 178 | 5 | 24 | 321 | 17 | 312 | 5.22e-67 | 213 |
| MS.gene77032.t1 | MTR_2g437770 | 42.244 | 303 | 156 | 8 | 27 | 321 | 50 | 341 | 8.01e-67 | 213 |
| MS.gene77032.t1 | MTR_2g008160 | 40.260 | 308 | 167 | 6 | 25 | 321 | 22 | 323 | 1.25e-65 | 209 |
| MS.gene77032.t1 | MTR_3g072210 | 56.989 | 186 | 77 | 3 | 138 | 321 | 54 | 238 | 1.40e-65 | 206 |
| MS.gene77032.t1 | MTR_6g043280 | 38.926 | 298 | 175 | 6 | 26 | 321 | 40 | 332 | 7.98e-65 | 207 |
| MS.gene77032.t1 | MTR_0286s0010 | 36.842 | 323 | 191 | 7 | 7 | 321 | 17 | 334 | 3.27e-64 | 206 |
| MS.gene77032.t1 | MTR_6g008075 | 36.842 | 323 | 191 | 7 | 7 | 321 | 17 | 334 | 3.27e-64 | 206 |
| MS.gene77032.t1 | MTR_1g009750 | 38.182 | 330 | 176 | 8 | 1 | 321 | 1 | 311 | 5.43e-64 | 205 |
| MS.gene77032.t1 | MTR_3g092990 | 37.658 | 316 | 176 | 5 | 14 | 321 | 13 | 315 | 2.96e-63 | 203 |
| MS.gene77032.t1 | MTR_2g099175 | 37.931 | 319 | 179 | 6 | 15 | 321 | 24 | 335 | 5.59e-62 | 200 |
| MS.gene77032.t1 | MTR_8g062780 | 35.802 | 324 | 197 | 5 | 7 | 321 | 3 | 324 | 9.87e-62 | 199 |
| MS.gene77032.t1 | MTR_6g043240 | 35.714 | 322 | 200 | 6 | 1 | 321 | 16 | 331 | 1.60e-60 | 197 |
| MS.gene77032.t1 | MTR_2g077990 | 38.623 | 334 | 163 | 8 | 25 | 319 | 74 | 404 | 6.22e-60 | 197 |
| MS.gene77032.t1 | MTR_2g078610 | 38.024 | 334 | 165 | 8 | 25 | 319 | 74 | 404 | 1.33e-59 | 196 |
| MS.gene77032.t1 | MTR_6g043460 | 37.037 | 297 | 181 | 5 | 27 | 321 | 36 | 328 | 3.06e-59 | 194 |
| MS.gene77032.t1 | MTR_2g067440 | 35.813 | 363 | 185 | 9 | 2 | 320 | 28 | 386 | 4.28e-59 | 194 |
| MS.gene77032.t1 | MTR_4g132490 | 34.884 | 301 | 188 | 4 | 27 | 321 | 29 | 327 | 5.84e-58 | 190 |
| MS.gene77032.t1 | MTR_2g008730 | 37.538 | 325 | 160 | 7 | 9 | 321 | 8 | 301 | 8.58e-58 | 188 |
| MS.gene77032.t1 | MTR_3g105790 | 35.294 | 323 | 194 | 4 | 8 | 321 | 6 | 322 | 3.21e-53 | 177 |
| MS.gene77032.t1 | MTR_2g078280 | 37.267 | 322 | 160 | 8 | 25 | 307 | 74 | 392 | 1.11e-52 | 178 |
| MS.gene77032.t1 | MTR_4g132110 | 34.551 | 301 | 189 | 5 | 26 | 321 | 31 | 328 | 8.32e-52 | 174 |
| MS.gene77032.t1 | MTR_1g066710 | 35.430 | 302 | 187 | 5 | 25 | 321 | 25 | 323 | 3.43e-51 | 172 |
| MS.gene77032.t1 | MTR_2g008160 | 36.424 | 302 | 152 | 6 | 25 | 321 | 22 | 288 | 6.45e-51 | 170 |
| MS.gene77032.t1 | MTR_7g072490 | 42.975 | 242 | 82 | 4 | 73 | 314 | 2 | 187 | 7.69e-51 | 167 |
| MS.gene77032.t1 | MTR_1g066380 | 34.437 | 302 | 190 | 5 | 25 | 321 | 25 | 323 | 1.51e-50 | 171 |
| MS.gene77032.t1 | MTR_1g066640 | 35.430 | 302 | 187 | 5 | 25 | 321 | 25 | 323 | 2.90e-50 | 170 |
| MS.gene77032.t1 | MTR_4g132110 | 33.987 | 306 | 189 | 6 | 26 | 321 | 31 | 333 | 2.02e-49 | 168 |
| MS.gene77032.t1 | MTR_5g033470 | 32.248 | 307 | 194 | 6 | 27 | 321 | 73 | 377 | 2.77e-49 | 169 |
| MS.gene77032.t1 | MTR_1g066680 | 34.437 | 302 | 189 | 6 | 25 | 321 | 25 | 322 | 6.95e-48 | 164 |
| MS.gene77032.t1 | MTR_2g067450 | 36.893 | 309 | 174 | 10 | 25 | 320 | 9 | 309 | 1.76e-47 | 162 |
| MS.gene77032.t1 | MTR_0147s0010 | 31.153 | 321 | 178 | 7 | 27 | 320 | 77 | 381 | 6.06e-45 | 157 |
| MS.gene77032.t1 | MTR_2g008160 | 46.023 | 176 | 89 | 4 | 25 | 200 | 22 | 191 | 2.82e-43 | 148 |
| MS.gene77032.t1 | MTR_3g072260 | 58.015 | 131 | 50 | 2 | 10 | 136 | 5 | 134 | 5.29e-41 | 140 |
| MS.gene77032.t1 | MTR_2g029880 | 44.271 | 192 | 85 | 5 | 140 | 321 | 9 | 188 | 1.29e-40 | 141 |
| MS.gene77032.t1 | MTR_1g066380 | 33.984 | 256 | 161 | 5 | 71 | 321 | 3 | 255 | 2.67e-39 | 139 |
| MS.gene77032.t1 | MTR_3g105790 | 36.515 | 241 | 142 | 3 | 90 | 321 | 8 | 246 | 3.11e-36 | 131 |
| MS.gene77032.t1 | MTR_3g086710 | 93.750 | 64 | 4 | 0 | 9 | 72 | 1 | 64 | 7.67e-36 | 125 |
| MS.gene77032.t1 | MTR_2g078560 | 33.184 | 223 | 110 | 5 | 133 | 317 | 95 | 316 | 7.41e-27 | 108 |
| MS.gene77032.t1 | MTR_2g077980 | 33.333 | 276 | 135 | 9 | 89 | 319 | 11 | 282 | 8.16e-27 | 107 |
| MS.gene77032.t1 | MTR_3g462850 | 43.262 | 141 | 68 | 4 | 193 | 321 | 9 | 149 | 9.08e-27 | 103 |
| MS.gene77032.t1 | MTR_5g074770 | 49.462 | 93 | 44 | 2 | 230 | 320 | 17 | 108 | 1.22e-23 | 93.6 |
| MS.gene77032.t1 | MTR_5g058120 | 34.416 | 154 | 97 | 2 | 164 | 317 | 6 | 155 | 6.11e-21 | 90.5 |
| MS.gene77032.t1 | MTR_7g086790 | 39.344 | 122 | 68 | 3 | 74 | 195 | 17 | 132 | 1.43e-19 | 85.5 |
| MS.gene77032.t1 | MTR_1g089005 | 42.500 | 120 | 61 | 3 | 27 | 140 | 15 | 132 | 3.64e-19 | 83.2 |
| MS.gene77032.t1 | MTR_4g114220 | 44.340 | 106 | 42 | 4 | 53 | 158 | 29 | 117 | 1.24e-17 | 78.6 |
| MS.gene77032.t1 | MTR_4g031040 | 35.714 | 168 | 69 | 4 | 86 | 253 | 1 | 129 | 1.87e-17 | 77.8 |
| MS.gene77032.t1 | MTR_6g048160 | 56.338 | 71 | 26 | 3 | 66 | 136 | 22 | 87 | 6.61e-17 | 75.1 |
| MS.gene77032.t1 | MTR_2g029930 | 37.037 | 108 | 43 | 2 | 9 | 105 | 1 | 94 | 1.85e-15 | 71.6 |
| MS.gene77032.t1 | MTR_1g098320 | 38.462 | 78 | 48 | 0 | 244 | 321 | 47 | 124 | 1.56e-12 | 64.7 |
| MS.gene77032.t1 | MTR_7g086810 | 29.508 | 122 | 59 | 2 | 24 | 145 | 3 | 97 | 3.57e-12 | 65.5 |
| MS.gene77032.t1 | MTR_4g012865 | 41.176 | 68 | 40 | 0 | 27 | 94 | 77 | 144 | 6.39e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77032.t1 | AT5G05340 | 62.626 | 297 | 107 | 3 | 27 | 321 | 30 | 324 | 1.52e-129 | 372 |
| MS.gene77032.t1 | AT1G14550 | 52.978 | 319 | 145 | 4 | 7 | 321 | 4 | 321 | 4.48e-113 | 330 |
| MS.gene77032.t1 | AT5G58400 | 52.351 | 319 | 149 | 2 | 5 | 321 | 8 | 325 | 8.94e-113 | 330 |
| MS.gene77032.t1 | AT5G58390 | 55.484 | 310 | 135 | 2 | 14 | 321 | 8 | 316 | 5.66e-111 | 325 |
| MS.gene77032.t1 | AT4G36430 | 53.465 | 303 | 131 | 4 | 27 | 321 | 30 | 330 | 6.41e-109 | 320 |
| MS.gene77032.t1 | AT2G18150 | 53.135 | 303 | 132 | 4 | 27 | 321 | 36 | 336 | 6.99e-108 | 318 |
| MS.gene77032.t1 | AT2G18140 | 53.135 | 303 | 132 | 4 | 27 | 321 | 35 | 335 | 2.53e-107 | 317 |
| MS.gene77032.t1 | AT1G44970 | 50.637 | 314 | 144 | 4 | 17 | 321 | 35 | 346 | 1.08e-105 | 313 |
| MS.gene77032.t1 | AT5G06720 | 49.842 | 317 | 148 | 4 | 14 | 321 | 19 | 333 | 3.67e-105 | 311 |
| MS.gene77032.t1 | AT1G14540 | 50.158 | 317 | 154 | 4 | 7 | 321 | 1 | 315 | 4.07e-105 | 310 |
| MS.gene77032.t1 | AT3G50990 | 50.645 | 310 | 143 | 4 | 20 | 321 | 34 | 341 | 5.17e-104 | 308 |
| MS.gene77032.t1 | AT5G66390 | 49.530 | 319 | 151 | 4 | 11 | 321 | 17 | 333 | 1.19e-102 | 305 |
| MS.gene77032.t1 | AT3G32980 | 49.020 | 306 | 143 | 5 | 27 | 321 | 31 | 334 | 1.53e-96 | 290 |
| MS.gene77032.t1 | AT5G06730 | 45.741 | 317 | 161 | 4 | 14 | 321 | 20 | 334 | 4.05e-96 | 288 |
| MS.gene77032.t1 | AT3G49110 | 47.950 | 317 | 152 | 5 | 16 | 321 | 22 | 336 | 1.55e-95 | 287 |
| MS.gene77032.t1 | AT3G49120 | 47.923 | 313 | 150 | 5 | 20 | 321 | 25 | 335 | 7.24e-95 | 285 |
| MS.gene77032.t1 | AT4G08770 | 47.436 | 312 | 151 | 5 | 21 | 321 | 18 | 327 | 1.78e-93 | 281 |
| MS.gene77032.t1 | AT4G08780 | 46.795 | 312 | 153 | 5 | 21 | 321 | 18 | 327 | 3.49e-93 | 281 |
| MS.gene77032.t1 | AT2G35380 | 46.364 | 330 | 158 | 5 | 9 | 321 | 8 | 335 | 1.84e-90 | 273 |
| MS.gene77032.t1 | AT1G49570 | 47.855 | 303 | 146 | 5 | 25 | 317 | 46 | 346 | 3.28e-90 | 273 |
| MS.gene77032.t1 | AT1G68850 | 43.881 | 335 | 168 | 8 | 5 | 321 | 3 | 335 | 5.05e-90 | 272 |
| MS.gene77032.t1 | AT2G38380 | 46.130 | 323 | 157 | 7 | 13 | 321 | 14 | 333 | 2.48e-89 | 271 |
| MS.gene77032.t1 | AT4G16270 | 47.987 | 298 | 143 | 5 | 32 | 321 | 55 | 348 | 3.32e-89 | 271 |
| MS.gene77032.t1 | AT2G38390 | 45.513 | 312 | 158 | 5 | 20 | 321 | 24 | 333 | 1.65e-88 | 269 |
| MS.gene77032.t1 | AT5G19890 | 46.547 | 333 | 153 | 9 | 1 | 321 | 8 | 327 | 1.02e-87 | 266 |
| MS.gene77032.t1 | AT2G22420 | 44.136 | 324 | 167 | 6 | 7 | 321 | 1 | 319 | 1.89e-85 | 260 |
| MS.gene77032.t1 | AT5G19880 | 44.951 | 307 | 155 | 5 | 27 | 321 | 25 | 329 | 1.37e-83 | 256 |
| MS.gene77032.t1 | AT5G51890 | 42.901 | 324 | 166 | 9 | 7 | 321 | 9 | 322 | 2.83e-80 | 247 |
| MS.gene77032.t1 | AT1G71695 | 43.624 | 298 | 163 | 4 | 27 | 321 | 44 | 339 | 2.62e-79 | 246 |
| MS.gene77032.t1 | AT5G42180 | 42.492 | 313 | 166 | 6 | 14 | 319 | 10 | 315 | 8.49e-79 | 243 |
| MS.gene77032.t1 | AT3G01190 | 42.122 | 311 | 165 | 7 | 19 | 321 | 18 | 321 | 3.19e-78 | 241 |
| MS.gene77032.t1 | AT5G17820 | 39.498 | 319 | 174 | 6 | 10 | 321 | 7 | 313 | 3.39e-75 | 234 |
| MS.gene77032.t1 | AT5G15180 | 40.867 | 323 | 176 | 8 | 9 | 321 | 12 | 329 | 4.53e-75 | 234 |
| MS.gene77032.t1 | AT3G03670 | 39.937 | 318 | 175 | 6 | 14 | 321 | 10 | 321 | 8.46e-75 | 233 |
| MS.gene77032.t1 | AT3G21770 | 40.764 | 314 | 173 | 7 | 16 | 320 | 18 | 327 | 1.79e-74 | 232 |
| MS.gene77032.t1 | AT5G17820 | 39.498 | 319 | 174 | 6 | 10 | 321 | 60 | 366 | 2.73e-74 | 233 |
| MS.gene77032.t1 | AT5G64120 | 41.414 | 297 | 161 | 5 | 31 | 321 | 39 | 328 | 5.89e-74 | 231 |
| MS.gene77032.t1 | AT4G11290 | 39.450 | 327 | 185 | 7 | 5 | 321 | 3 | 326 | 8.18e-74 | 231 |
| MS.gene77032.t1 | AT1G05260 | 40.635 | 315 | 174 | 7 | 16 | 321 | 15 | 325 | 4.57e-73 | 229 |
| MS.gene77032.t1 | AT1G05240 | 41.967 | 305 | 162 | 7 | 27 | 321 | 26 | 325 | 5.33e-73 | 228 |
| MS.gene77032.t1 | AT1G05250 | 41.967 | 305 | 162 | 7 | 27 | 321 | 26 | 325 | 5.33e-73 | 228 |
| MS.gene77032.t1 | AT2G41480 | 40.122 | 329 | 178 | 6 | 5 | 321 | 7 | 328 | 5.82e-72 | 226 |
| MS.gene77032.t1 | AT4G33420 | 41.401 | 314 | 173 | 7 | 9 | 321 | 22 | 325 | 5.49e-71 | 223 |
| MS.gene77032.t1 | AT4G33420 | 41.401 | 314 | 173 | 7 | 9 | 321 | 69 | 372 | 2.63e-70 | 223 |
| MS.gene77032.t1 | AT5G40150 | 40.645 | 310 | 178 | 5 | 16 | 321 | 21 | 328 | 8.63e-70 | 220 |
| MS.gene77032.t1 | AT4G26010 | 38.462 | 312 | 180 | 7 | 8 | 318 | 6 | 306 | 4.65e-69 | 218 |
| MS.gene77032.t1 | AT4G26010 | 38.462 | 312 | 180 | 7 | 8 | 318 | 34 | 334 | 9.98e-69 | 218 |
| MS.gene77032.t1 | AT3G28200 | 40.594 | 303 | 175 | 5 | 22 | 321 | 16 | 316 | 2.54e-68 | 216 |
| MS.gene77032.t1 | AT5G67400 | 38.413 | 315 | 182 | 5 | 13 | 317 | 13 | 325 | 3.30e-68 | 216 |
| MS.gene77032.t1 | AT2G18980 | 38.671 | 331 | 185 | 7 | 1 | 321 | 1 | 323 | 1.40e-67 | 214 |
| MS.gene77032.t1 | AT2G35380 | 48.193 | 249 | 114 | 4 | 86 | 321 | 1 | 247 | 1.25e-66 | 209 |
| MS.gene77032.t1 | AT5G39580 | 38.110 | 328 | 187 | 7 | 1 | 321 | 1 | 319 | 2.06e-66 | 211 |
| MS.gene77032.t1 | AT5G47000 | 38.318 | 321 | 189 | 6 | 7 | 321 | 13 | 330 | 4.57e-65 | 208 |
| MS.gene77032.t1 | AT1G30870 | 40.850 | 306 | 159 | 8 | 27 | 321 | 51 | 345 | 5.21e-65 | 209 |
| MS.gene77032.t1 | AT5G14130 | 36.760 | 321 | 191 | 6 | 9 | 321 | 14 | 330 | 7.54e-65 | 207 |
| MS.gene77032.t1 | AT5G14130 | 36.760 | 321 | 191 | 6 | 9 | 321 | 55 | 371 | 1.93e-64 | 208 |
| MS.gene77032.t1 | AT4G30170 | 39.672 | 305 | 168 | 7 | 27 | 321 | 27 | 325 | 1.96e-64 | 206 |
| MS.gene77032.t1 | AT1G34510 | 37.013 | 308 | 185 | 6 | 15 | 321 | 10 | 309 | 2.51e-64 | 206 |
| MS.gene77032.t1 | AT4G37530 | 39.073 | 302 | 174 | 4 | 25 | 317 | 25 | 325 | 7.34e-64 | 205 |
| MS.gene77032.t1 | AT3G49960 | 37.261 | 314 | 185 | 5 | 14 | 317 | 14 | 325 | 1.75e-63 | 204 |
| MS.gene77032.t1 | AT4G33870 | 34.615 | 338 | 176 | 6 | 25 | 320 | 66 | 400 | 1.79e-63 | 206 |
| MS.gene77032.t1 | AT4G17690 | 39.286 | 308 | 177 | 6 | 22 | 321 | 17 | 322 | 1.48e-62 | 201 |
| MS.gene77032.t1 | AT5G64110 | 39.692 | 325 | 173 | 8 | 10 | 321 | 16 | 330 | 2.90e-62 | 201 |
| MS.gene77032.t1 | AT5G64100 | 39.604 | 303 | 163 | 7 | 29 | 321 | 39 | 331 | 4.78e-62 | 200 |
| MS.gene77032.t1 | AT1G24110 | 38.614 | 303 | 176 | 5 | 27 | 321 | 22 | 322 | 1.08e-61 | 199 |
| MS.gene77032.t1 | AT2G39040 | 40.453 | 309 | 166 | 10 | 27 | 321 | 46 | 350 | 1.10e-60 | 197 |
| MS.gene77032.t1 | AT4G37520 | 37.417 | 302 | 179 | 4 | 25 | 317 | 25 | 325 | 4.08e-60 | 195 |
| MS.gene77032.t1 | AT4G37520 | 37.086 | 302 | 177 | 5 | 25 | 317 | 25 | 322 | 2.55e-58 | 191 |
| MS.gene77032.t1 | AT4G31760 | 34.985 | 323 | 195 | 4 | 8 | 321 | 10 | 326 | 3.23e-58 | 190 |
| MS.gene77032.t1 | AT2G34060 | 35.503 | 338 | 196 | 8 | 1 | 318 | 8 | 343 | 1.04e-57 | 190 |
| MS.gene77032.t1 | AT4G37530 | 41.176 | 255 | 140 | 4 | 25 | 270 | 25 | 278 | 1.05e-56 | 185 |
| MS.gene77032.t1 | AT5G22410 | 33.025 | 324 | 196 | 10 | 7 | 318 | 8 | 322 | 2.58e-56 | 186 |
| MS.gene77032.t1 | AT4G25980 | 37.459 | 307 | 174 | 6 | 27 | 321 | 26 | 326 | 6.79e-56 | 184 |
| MS.gene77032.t1 | AT5G24070 | 35.562 | 329 | 190 | 8 | 7 | 321 | 15 | 335 | 3.48e-55 | 183 |
| MS.gene77032.t1 | AT4G21960 | 33.951 | 324 | 200 | 6 | 9 | 321 | 7 | 327 | 1.81e-54 | 181 |
| MS.gene77032.t1 | AT1G77100 | 39.414 | 307 | 171 | 10 | 24 | 321 | 19 | 319 | 2.68e-54 | 180 |
| MS.gene77032.t1 | AT2G43480 | 34.969 | 326 | 190 | 8 | 10 | 321 | 18 | 335 | 2.15e-53 | 178 |
| MS.gene77032.t1 | AT2G37130 | 35.880 | 301 | 184 | 6 | 27 | 321 | 30 | 327 | 2.97e-53 | 177 |
| MS.gene77032.t1 | AT2G37130 | 35.906 | 298 | 182 | 6 | 30 | 321 | 2 | 296 | 3.18e-53 | 176 |
| MS.gene77032.t1 | AT2G24800 | 34.426 | 305 | 184 | 5 | 27 | 321 | 31 | 329 | 3.90e-52 | 175 |
| MS.gene77032.t1 | AT3G17070 | 34.713 | 314 | 184 | 8 | 22 | 321 | 33 | 339 | 2.19e-46 | 160 |
| MS.gene77032.t1 | AT5G39580 | 38.679 | 212 | 117 | 6 | 5 | 216 | 5 | 203 | 6.62e-39 | 137 |
| MS.gene77032.t1 | AT4G25980 | 43.678 | 174 | 92 | 4 | 27 | 200 | 71 | 238 | 3.39e-37 | 134 |
| MS.gene77032.t1 | AT3G17070 | 34.457 | 267 | 153 | 9 | 69 | 321 | 18 | 276 | 3.47e-34 | 126 |
| MS.gene77032.t1 | AT2G24800 | 38.021 | 192 | 107 | 6 | 27 | 217 | 31 | 211 | 1.78e-32 | 121 |
| MS.gene77032.t1 | AT1G77490 | 25.385 | 260 | 151 | 9 | 61 | 303 | 106 | 339 | 1.66e-12 | 68.2 |
| MS.gene77032.t1 | AT1G77490 | 25.385 | 260 | 151 | 9 | 61 | 303 | 106 | 339 | 2.10e-12 | 67.8 |
Find 56 sgRNAs with CRISPR-Local
Find 81 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTAGCTGAATTTAAATT+TGG | 0.113514 | 4.3:-70492171 | None:intergenic |
| CAGTATCTTGATAAATTAAT+TGG | 0.213697 | 4.3:-70493203 | None:intergenic |
| GTTTGAGTCTCCGCCTTCTC+TGG | 0.235917 | 4.3:-70492930 | None:intergenic |
| TGAAGTGGTTGATGAGATTA+AGG | 0.263243 | 4.3:+70492197 | MS.gene77032:CDS |
| CTAATAGTGCTCAAAGCATT+AGG | 0.267809 | 4.3:-70491591 | None:intergenic |
| GGAAATATTAAGCCACTTAC+TGG | 0.284799 | 4.3:+70493145 | MS.gene77032:CDS |
| AAAGACCTCGTTGCCCTATC+TGG | 0.286567 | 4.3:+70492803 | MS.gene77032:CDS |
| TGCAAAATCTATGATTAAGA+TGG | 0.337659 | 4.3:+70493123 | MS.gene77032:CDS |
| AAGTCGTGCCGATGCAGATT+CGG | 0.343313 | 4.3:+70492709 | MS.gene77032:CDS |
| ACCGTCATGGAATGTGAAAC+TGG | 0.352275 | 4.3:+70492664 | MS.gene77032:CDS |
| TTGTTGAATGGTGGTTATAC+TGG | 0.357733 | 4.3:+70493049 | MS.gene77032:CDS |
| GTGAAGTTCGTTGCAATTGC+AGG | 0.359490 | 4.3:+70493176 | MS.gene77032:CDS |
| CTATCTGGAGCACACACTAT+TGG | 0.391267 | 4.3:+70492818 | MS.gene77032:CDS |
| CAATAGTGTGTGCTCCAGAT+AGG | 0.400931 | 4.3:-70492817 | None:intergenic |
| AGTCGTGCCGATGCAGATTC+GGG | 0.407331 | 4.3:+70492710 | MS.gene77032:CDS |
| TAATAGTGCTCAAAGCATTA+GGG | 0.431156 | 4.3:-70491590 | None:intergenic |
| TGTTTCTTGTGCAGACATAT+TGG | 0.453461 | 4.3:+70492251 | MS.gene77032:CDS |
| AGAAAGACAGAATGATGGTC+CGG | 0.461060 | 4.3:-70492741 | None:intergenic |
| TTTGAGTCTCCGCCTTCTCT+GGG | 0.468683 | 4.3:-70492929 | None:intergenic |
| GCAAAATCTATGATTAAGAT+GGG | 0.472740 | 4.3:+70493124 | MS.gene77032:CDS |
| TGTTGTTGTCATTGTAGATT+CGG | 0.474841 | 4.3:-70492868 | None:intergenic |
| TCACCTTGTCTCCCAGTAAG+TGG | 0.477158 | 4.3:-70493157 | None:intergenic |
| GAGCATTGGTTAGAAAATAT+AGG | 0.478103 | 4.3:+70493071 | MS.gene77032:CDS |
| ATGTCTGCACAAGAAACAAC+TGG | 0.493198 | 4.3:-70492246 | None:intergenic |
| CCAAATTTAAATTCAGCTAG+AGG | 0.524290 | 4.3:+70492171 | MS.gene77032:CDS |
| GAAAGACAGAATGATGGTCC+GGG | 0.528311 | 4.3:-70492740 | None:intergenic |
| TCTAGACTCTACACCTTCGA+TGG | 0.530212 | 4.3:+70492128 | MS.gene77032:CDS |
| GGTGTGATTCAGGGTTGTGA+TGG | 0.531565 | 4.3:+70492096 | MS.gene77032:intron |
| GCAGATTCGGGCAATATCCC+CGG | 0.532728 | 4.3:+70492722 | MS.gene77032:CDS |
| CAAAATGTTTGTCCCAGAGA+AGG | 0.543913 | 4.3:+70492917 | MS.gene77032:CDS |
| CCCAGTTTCACATTCCATGA+CGG | 0.547504 | 4.3:-70492665 | None:intergenic |
| AATAGTGTGTGCTCCAGATA+GGG | 0.548473 | 4.3:-70492816 | None:intergenic |
| TCTGATCAAGAATTGTTGAA+TGG | 0.552781 | 4.3:+70493037 | MS.gene77032:CDS |
| TGCAAGAGACTCTGTTGTTG+CGG | 0.563848 | 4.3:+70492281 | MS.gene77032:CDS |
| AGTTGAGAAAGACAGAATGA+TGG | 0.578538 | 4.3:-70492746 | None:intergenic |
| TATATATGGATGCAGTTAGG+AGG | 0.592979 | 4.3:+70492641 | MS.gene77032:intron |
| GAGCTGCTAACACTATTGCA+TGG | 0.601264 | 4.3:-70491515 | None:intergenic |
| TGCAGTTAGGAGGACCGTCA+TGG | 0.603690 | 4.3:+70492651 | MS.gene77032:intron |
| CCGTCATGGAATGTGAAACT+GGG | 0.604760 | 4.3:+70492665 | MS.gene77032:CDS |
| GATATTGCCCGAATCTGCAT+CGG | 0.609450 | 4.3:-70492717 | None:intergenic |
| TACACCGGCAAAATTTGATG+TGG | 0.613189 | 4.3:+70492973 | MS.gene77032:CDS |
| GAAATATTAAGCCACTTACT+GGG | 0.616763 | 4.3:+70493146 | MS.gene77032:CDS |
| GATCAAGAATTGTTGAATGG+TGG | 0.618707 | 4.3:+70493040 | MS.gene77032:CDS |
| GAAGCTGTTGATAAAGCATG+TGG | 0.618722 | 4.3:+70492219 | MS.gene77032:CDS |
| TTCAGCTAGAGGATTTGAAG+TGG | 0.627832 | 4.3:+70492182 | MS.gene77032:CDS |
| GTAGTAAAGAAGCACCCATA+CGG | 0.628918 | 4.3:-70491647 | None:intergenic |
| GTTCAAAGAGAGAACCGTAT+GGG | 0.629967 | 4.3:+70491633 | MS.gene77032:CDS |
| AATGTTTGTCCCAGAGAAGG+CGG | 0.632543 | 4.3:+70492920 | MS.gene77032:CDS |
| AGTTCAAAGAGAGAACCGTA+TGG | 0.633955 | 4.3:+70491632 | MS.gene77032:CDS |
| TGGTGGTTATACTGGAGCAT+TGG | 0.634930 | 4.3:+70493057 | MS.gene77032:CDS |
| AGCTCTCGACAGTGTTACAC+CGG | 0.659336 | 4.3:+70492958 | MS.gene77032:CDS |
| AAGCCACTTACTGGGAGACA+AGG | 0.665399 | 4.3:+70493154 | MS.gene77032:CDS |
| AAAGACAGAATGATGGTCCG+GGG | 0.668454 | 4.3:-70492739 | None:intergenic |
| TAACACTGTCGAGAGCTGCA+AGG | 0.690785 | 4.3:-70492952 | None:intergenic |
| CATTGAGAAATACCTATGTG+AGG | 0.711191 | 4.3:-70491487 | None:intergenic |
| GTGCTCCAGATAGGGCAACG+AGG | 0.748414 | 4.3:-70492808 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAAATTTACAATTATATA+TGG | + | chr4.3:70492627-70492646 | MS.gene77032:intron | 10.0% |
| !!! | TTTTGATATAAATTTTTTTG+AGG | - | chr4.3:70491745-70491764 | None:intergenic | 10.0% |
| !! | AAATAAAGTTAATAAAAGGA+AGG | + | chr4.3:70492441-70492460 | MS.gene77032:intron | 15.0% |
| !! | AATAATATTATGTATACACA+TGG | - | chr4.3:70491721-70491740 | None:intergenic | 15.0% |
| !! | TTGAACATATCAAAATTAAA+AGG | + | chr4.3:70492497-70492516 | MS.gene77032:intron | 15.0% |
| !!! | TTATTTTATTTTGAACTAGT+CGG | + | chr4.3:70492360-70492379 | MS.gene77032:intron | 15.0% |
| !! | ACATATCAAAATTAAAAGGA+AGG | + | chr4.3:70492501-70492520 | MS.gene77032:intron | 20.0% |
| !!! | AATTTTAGTTACTTTTCGAA+AGG | + | chr4.3:70491931-70491950 | MS.gene77032:intron | 20.0% |
| !!! | AATTTTGATATGTTCAAAGT+TGG | - | chr4.3:70492494-70492513 | None:intergenic | 20.0% |
| !!! | ATCAAAAATTTTGAAAACCA+GGG | + | chr4.3:70492770-70492789 | MS.gene77032:CDS | 20.0% |
| ! | AATTATATATGGATGCAGTT+AGG | + | chr4.3:70492638-70492657 | MS.gene77032:intron | 25.0% |
| ! | ATTAATTTATGGTGTGATTC+AGG | + | chr4.3:70492086-70492105 | MS.gene77032:intron | 25.0% |
| ! | CACAATTGATTAAAAAGAAG+GGG | + | chr4.3:70493005-70493024 | MS.gene77032:CDS | 25.0% |
| ! | GCAAAATCTATGATTAAGAT+GGG | + | chr4.3:70493124-70493143 | MS.gene77032:CDS | 25.0% |
| ! | GCACAATTGATTAAAAAGAA+GGG | + | chr4.3:70493004-70493023 | MS.gene77032:CDS | 25.0% |
| ! | TAAAACAGAAATTGTTTGCA+TGG | + | chr4.3:70492389-70492408 | MS.gene77032:intron | 25.0% |
| ! | TAAAGTTAATAAAAGGAAGG+TGG | + | chr4.3:70492444-70492463 | MS.gene77032:intron | 25.0% |
| ! | TGCAAAATCTATGATTAAGA+TGG | + | chr4.3:70493123-70493142 | MS.gene77032:CDS | 25.0% |
| ! | TTAATTTATGGTGTGATTCA+GGG | + | chr4.3:70492087-70492106 | MS.gene77032:intron | 25.0% |
| !!! | CATCAAAAATTTTGAAAACC+AGG | + | chr4.3:70492769-70492788 | MS.gene77032:CDS | 25.0% |
| CCAAATTTAAATTCAGCTAG+AGG | + | chr4.3:70492171-70492190 | MS.gene77032:CDS | 30.0% | |
| CCTCTAGCTGAATTTAAATT+TGG | - | chr4.3:70492174-70492193 | None:intergenic | 30.0% | |
| CGCACAATTGATTAAAAAGA+AGG | + | chr4.3:70493003-70493022 | MS.gene77032:CDS | 30.0% | |
| GAAATATTAAGCCACTTACT+GGG | + | chr4.3:70493146-70493165 | MS.gene77032:CDS | 30.0% | |
| TCTGATCAAGAATTGTTGAA+TGG | + | chr4.3:70493037-70493056 | MS.gene77032:CDS | 30.0% | |
| TGTTGTTGTCATTGTAGATT+CGG | - | chr4.3:70492871-70492890 | None:intergenic | 30.0% | |
| TTTGATATGTTCAAAGTTGG+TGG | - | chr4.3:70492491-70492510 | None:intergenic | 30.0% | |
| ! | TAATAGTGCTCAAAGCATTA+GGG | - | chr4.3:70491593-70491612 | None:intergenic | 30.0% |
| !! | GAGCATTGGTTAGAAAATAT+AGG | + | chr4.3:70493071-70493090 | MS.gene77032:CDS | 30.0% |
| ACAGAAATTGTTTGCATGGT+TGG | + | chr4.3:70492393-70492412 | MS.gene77032:intron | 35.0% | |
| AGTTGAGAAAGACAGAATGA+TGG | - | chr4.3:70492749-70492768 | None:intergenic | 35.0% | |
| CATTGAGAAATACCTATGTG+AGG | - | chr4.3:70491490-70491509 | None:intergenic | 35.0% | |
| GATCAAGAATTGTTGAATGG+TGG | + | chr4.3:70493040-70493059 | MS.gene77032:CDS | 35.0% | |
| GGAAATATTAAGCCACTTAC+TGG | + | chr4.3:70493145-70493164 | MS.gene77032:CDS | 35.0% | |
| TATATATGGATGCAGTTAGG+AGG | + | chr4.3:70492641-70492660 | MS.gene77032:intron | 35.0% | |
| TGTTTCTTGTGCAGACATAT+TGG | + | chr4.3:70492251-70492270 | MS.gene77032:CDS | 35.0% | |
| TTGTTGAATGGTGGTTATAC+TGG | + | chr4.3:70493049-70493068 | MS.gene77032:CDS | 35.0% | |
| ! | CTAATAGTGCTCAAAGCATT+AGG | - | chr4.3:70491594-70491613 | None:intergenic | 35.0% |
| ! | TAAGCCACATCAAATTTTGC+CGG | - | chr4.3:70492980-70492999 | None:intergenic | 35.0% |
| !! | TGAAGTGGTTGATGAGATTA+AGG | + | chr4.3:70492197-70492216 | MS.gene77032:CDS | 35.0% |
| !!! | TTTTTTTCACTGTCCATCGA+AGG | - | chr4.3:70492144-70492163 | None:intergenic | 35.0% |
| AATAGTGTGTGCTCCAGATA+GGG | - | chr4.3:70492819-70492838 | None:intergenic | 40.0% | |
| AGAAAGACAGAATGATGGTC+CGG | - | chr4.3:70492744-70492763 | None:intergenic | 40.0% | |
| AGTTCAAAGAGAGAACCGTA+TGG | + | chr4.3:70491632-70491651 | MS.gene77032:CDS | 40.0% | |
| ATGTCTGCACAAGAAACAAC+TGG | - | chr4.3:70492249-70492268 | None:intergenic | 40.0% | |
| CAAAATGTTTGTCCCAGAGA+AGG | + | chr4.3:70492917-70492936 | MS.gene77032:CDS | 40.0% | |
| GTTCAAAGAGAGAACCGTAT+GGG | + | chr4.3:70491633-70491652 | MS.gene77032:CDS | 40.0% | |
| TACACCGGCAAAATTTGATG+TGG | + | chr4.3:70492973-70492992 | MS.gene77032:CDS | 40.0% | |
| TTCAGCTAGAGGATTTGAAG+TGG | + | chr4.3:70492182-70492201 | MS.gene77032:CDS | 40.0% | |
| ! | GAAGCTGTTGATAAAGCATG+TGG | + | chr4.3:70492219-70492238 | MS.gene77032:CDS | 40.0% |
| !! | GTAGTAAAGAAGCACCCATA+CGG | - | chr4.3:70491650-70491669 | None:intergenic | 40.0% |
| AAAGACAGAATGATGGTCCG+GGG | - | chr4.3:70492742-70492761 | None:intergenic | 45.0% | |
| AATGTTTGTCCCAGAGAAGG+CGG | + | chr4.3:70492920-70492939 | MS.gene77032:CDS | 45.0% | |
| ACCGTCATGGAATGTGAAAC+TGG | + | chr4.3:70492664-70492683 | MS.gene77032:CDS | 45.0% | |
| CAATAGTGTGTGCTCCAGAT+AGG | - | chr4.3:70492820-70492839 | None:intergenic | 45.0% | |
| CCCAGTTTCACATTCCATGA+CGG | - | chr4.3:70492668-70492687 | None:intergenic | 45.0% | |
| CCGTCATGGAATGTGAAACT+GGG | + | chr4.3:70492665-70492684 | MS.gene77032:CDS | 45.0% | |
| GAAAGACAGAATGATGGTCC+GGG | - | chr4.3:70492743-70492762 | None:intergenic | 45.0% | |
| GAGCTGCTAACACTATTGCA+TGG | - | chr4.3:70491518-70491537 | None:intergenic | 45.0% | |
| GATATTGCCCGAATCTGCAT+CGG | - | chr4.3:70492720-70492739 | None:intergenic | 45.0% | |
| GTGAAGTTCGTTGCAATTGC+AGG | + | chr4.3:70493176-70493195 | MS.gene77032:CDS | 45.0% | |
| TCTAGACTCTACACCTTCGA+TGG | + | chr4.3:70492128-70492147 | MS.gene77032:CDS | 45.0% | |
| TGCAAGAGACTCTGTTGTTG+CGG | + | chr4.3:70492281-70492300 | MS.gene77032:CDS | 45.0% | |
| TGGTGGTTATACTGGAGCAT+TGG | + | chr4.3:70493057-70493076 | MS.gene77032:CDS | 45.0% | |
| ! | CTATCTGGAGCACACACTAT+TGG | + | chr4.3:70492818-70492837 | MS.gene77032:CDS | 45.0% |
| !! | GGTCTTTTTCGTTTAGTCCC+TGG | - | chr4.3:70492790-70492809 | None:intergenic | 45.0% |
| !! | AATAAAATAAAGTTAATAAA+AGG | + | chr4.3:70492437-70492456 | MS.gene77032:intron | 5.0% |
| !!! | TTATTTTAATGATTAATTTA+TGG | + | chr4.3:70491965-70491984 | MS.gene77032:intron | 5.0% |
| AAAGACCTCGTTGCCCTATC+TGG | + | chr4.3:70492803-70492822 | MS.gene77032:CDS | 50.0% | |
| AAGCCACTTACTGGGAGACA+AGG | + | chr4.3:70493154-70493173 | MS.gene77032:CDS | 50.0% | |
| AGCTCTCGACAGTGTTACAC+CGG | + | chr4.3:70492958-70492977 | MS.gene77032:CDS | 50.0% | |
| GGTGTGATTCAGGGTTGTGA+TGG | + | chr4.3:70492096-70492115 | MS.gene77032:intron | 50.0% | |
| TAACACTGTCGAGAGCTGCA+AGG | - | chr4.3:70492955-70492974 | None:intergenic | 50.0% | |
| TCACCTTGTCTCCCAGTAAG+TGG | - | chr4.3:70493160-70493179 | None:intergenic | 50.0% | |
| TTTGAGTCTCCGCCTTCTCT+GGG | - | chr4.3:70492932-70492951 | None:intergenic | 50.0% | |
| ! | AAGTCGTGCCGATGCAGATT+CGG | + | chr4.3:70492709-70492728 | MS.gene77032:CDS | 50.0% |
| GCAGATTCGGGCAATATCCC+CGG | + | chr4.3:70492722-70492741 | MS.gene77032:CDS | 55.0% | |
| GTTTGAGTCTCCGCCTTCTC+TGG | - | chr4.3:70492933-70492952 | None:intergenic | 55.0% | |
| TGCAGTTAGGAGGACCGTCA+TGG | + | chr4.3:70492651-70492670 | MS.gene77032:intron | 55.0% | |
| ! | AGTCGTGCCGATGCAGATTC+GGG | + | chr4.3:70492710-70492729 | MS.gene77032:CDS | 55.0% |
| GTGCTCCAGATAGGGCAACG+AGG | - | chr4.3:70492811-70492830 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 70491483 | 70493210 | 70491483 | ID=MS.gene77032 |
| chr4.3 | mRNA | 70491483 | 70493210 | 70491483 | ID=MS.gene77032.t1;Parent=MS.gene77032 |
| chr4.3 | exon | 70491483 | 70491698 | 70491483 | ID=MS.gene77032.t1.exon1;Parent=MS.gene77032.t1 |
| chr4.3 | CDS | 70491483 | 70491698 | 70491483 | ID=cds.MS.gene77032.t1;Parent=MS.gene77032.t1 |
| chr4.3 | exon | 70492108 | 70492302 | 70492108 | ID=MS.gene77032.t1.exon2;Parent=MS.gene77032.t1 |
| chr4.3 | CDS | 70492108 | 70492302 | 70492108 | ID=cds.MS.gene77032.t1;Parent=MS.gene77032.t1 |
| chr4.3 | exon | 70492656 | 70493210 | 70492656 | ID=MS.gene77032.t1.exon3;Parent=MS.gene77032.t1 |
| chr4.3 | CDS | 70492656 | 70493210 | 70492656 | ID=cds.MS.gene77032.t1;Parent=MS.gene77032.t1 |
| Gene Sequence |
| Protein sequence |
