Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91158.t1 | XP_013447155.1 | 89.7 | 639 | 47 | 1 | 12 | 631 | 1 | 639 | 2.30E-285 | 991.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91158.t1 | Q9SUQ3 | 59.5 | 642 | 217 | 9 | 14 | 625 | 7 | 635 | 2.6e-176 | 620.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91158.t1 | A0A072TUR7 | 89.7 | 639 | 47 | 1 | 12 | 631 | 1 | 639 | 1.7e-285 | 991.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049217 | MS.gene91158 | 0.823372 | 1.44E-53 | -1.69E-46 |
| MS.gene049614 | MS.gene91158 | 0.800199 | 1.61E-48 | -1.69E-46 |
| MS.gene050381 | MS.gene91158 | -0.805094 | 1.58E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene91158 | 0.808344 | 3.24E-50 | -1.69E-46 |
| MS.gene050770 | MS.gene91158 | 0.811747 | 6.00E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene91158 | 0.805817 | 1.11E-49 | -1.69E-46 |
| MS.gene051255 | MS.gene91158 | 0.834827 | 2.39E-56 | -1.69E-46 |
| MS.gene051566 | MS.gene91158 | 0.807015 | 6.21E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene91158 | 0.806088 | 9.75E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene91158 | 0.828488 | 8.74E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene91158 | 0.811383 | 7.19E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene91158 | 0.840845 | 6.80E-58 | -1.69E-46 |
| MS.gene051877 | MS.gene91158 | 0.819747 | 9.87E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene91158 | 0.835785 | 1.37E-56 | -1.69E-46 |
| MS.gene052287 | MS.gene91158 | 0.819921 | 9.01E-53 | -1.69E-46 |
| MS.gene052379 | MS.gene91158 | 0.824412 | 8.19E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene91158 | 0.819852 | 9.34E-53 | -1.69E-46 |
| MS.gene053018 | MS.gene91158 | 0.802968 | 4.36E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene91158 | 0.807561 | 4.76E-50 | -1.69E-46 |
| MS.gene053322 | MS.gene91158 | 0.822135 | 2.78E-53 | -1.69E-46 |
| MS.gene053561 | MS.gene91158 | -0.831246 | 1.86E-55 | -1.69E-46 |
| MS.gene053813 | MS.gene91158 | 0.814425 | 1.55E-51 | -1.69E-46 |
| MS.gene054642 | MS.gene91158 | 0.802953 | 4.39E-49 | -1.69E-46 |
| MS.gene054802 | MS.gene91158 | 0.817087 | 3.95E-52 | -1.69E-46 |
| MS.gene054803 | MS.gene91158 | 0.815752 | 7.87E-52 | -1.69E-46 |
| MS.gene054804 | MS.gene91158 | 0.815746 | 7.89E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene91158 | -0.803949 | 2.73E-49 | -1.69E-46 |
| MS.gene055499 | MS.gene91158 | 0.816672 | 4.90E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene91158 | 0.805205 | 1.49E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene91158 | 0.827641 | 1.40E-54 | -1.69E-46 |
| MS.gene05592 | MS.gene91158 | 0.807482 | 4.95E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene91158 | 0.802615 | 5.16E-49 | -1.69E-46 |
| MS.gene056448 | MS.gene91158 | 0.808318 | 3.28E-50 | -1.69E-46 |
| MS.gene056452 | MS.gene91158 | 0.822197 | 2.69E-53 | -1.69E-46 |
| MS.gene056942 | MS.gene91158 | 0.836071 | 1.16E-56 | -1.69E-46 |
| MS.gene057129 | MS.gene91158 | 0.814912 | 1.21E-51 | -1.69E-46 |
| MS.gene057146 | MS.gene91158 | 0.802121 | 6.52E-49 | -1.69E-46 |
| MS.gene058323 | MS.gene91158 | 0.802993 | 4.31E-49 | -1.69E-46 |
| MS.gene058588 | MS.gene91158 | 0.800793 | 1.22E-48 | -1.69E-46 |
| MS.gene058840 | MS.gene91158 | -0.842506 | 2.48E-58 | -1.69E-46 |
| MS.gene059029 | MS.gene91158 | 0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene91158 | 0.838035 | 3.65E-57 | -1.69E-46 |
| MS.gene059902 | MS.gene91158 | 0.841964 | 3.45E-58 | -1.69E-46 |
| MS.gene06046 | MS.gene91158 | 0.880746 | 4.26E-70 | -1.69E-46 |
| MS.gene060482 | MS.gene91158 | 0.813355 | 2.67E-51 | -1.69E-46 |
| MS.gene06074 | MS.gene91158 | -0.805019 | 1.63E-49 | -1.69E-46 |
| MS.gene060818 | MS.gene91158 | 0.804078 | 2.57E-49 | -1.69E-46 |
| MS.gene060837 | MS.gene91158 | 0.810315 | 1.23E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene91158 | 0.835055 | 2.10E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 142 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTTCTGTTTGTGATAAT+TGG | 0.130995 | 4.2:-4884182 | MS.gene91158:CDS |
| CTTCAGTTCAATAATTTATC+TGG | 0.152351 | 4.2:-4883964 | MS.gene91158:CDS |
| TACCATAAGTTTCTCATCTT+TGG | 0.158004 | 4.2:+4883152 | None:intergenic |
| CTTAGATCCAATTTAATATC+TGG | 0.184428 | 4.2:-4884036 | MS.gene91158:CDS |
| TTACCTGGTGTTGGATTTAA+TGG | 0.202015 | 4.2:-4884111 | MS.gene91158:CDS |
| TCTAATTTGACTCAGCTTGC+TGG | 0.230685 | 4.2:-4883853 | MS.gene91158:CDS |
| AACATTTGGTACTGCTTATA+AGG | 0.261175 | 4.2:-4883316 | MS.gene91158:CDS |
| TATGCGTATTGTTGTGTATA+TGG | 0.266539 | 4.2:-4884296 | MS.gene91158:CDS |
| TATTCATTTCTCAAGGTTAC+AGG | 0.271554 | 4.2:-4883787 | MS.gene91158:intron |
| GAAAGGTTACTAATAGTATT+TGG | 0.276690 | 4.2:+4884078 | None:intergenic |
| ATTTGTTGGAAAGTCGAATA+AGG | 0.279483 | 4.2:-4883472 | MS.gene91158:CDS |
| ACCATCTCTTCTTCTATGTT+TGG | 0.287391 | 4.2:+4881812 | None:intergenic |
| CACCTTCAAGGACTTTGAAT+TGG | 0.296460 | 4.2:-4884212 | MS.gene91158:CDS |
| TTTCTCAATTCTAAACAATA+TGG | 0.300824 | 4.2:-4882115 | MS.gene91158:CDS |
| AAAACCTCTTTATCTTCAAC+AGG | 0.313257 | 4.2:+4884258 | None:intergenic |
| GAGAGCTTCTGCTGAGGTGC+TGG | 0.322314 | 4.2:-4883346 | MS.gene91158:CDS |
| AAACTACTTGAAGTGGAAAA+AGG | 0.323072 | 4.2:-4884339 | MS.gene91158:CDS |
| GGAAATCTCAGTAATGATTT+AGG | 0.329452 | 4.2:+4883726 | None:intergenic |
| TTCCTTGTGTCTGTAACTTC+AGG | 0.340687 | 4.2:+4882013 | None:intergenic |
| CTTTGCCTGATTTCTCAGTT+TGG | 0.353461 | 4.2:-4883939 | MS.gene91158:CDS |
| TGTGTGGATGGGCGATTTCC+CGG | 0.355236 | 4.2:+4881934 | None:intergenic |
| TATGATGATGATGCATTTGT+TGG | 0.358905 | 4.2:-4883486 | MS.gene91158:CDS |
| TAGGGCAAGTGAGGTTGATA+TGG | 0.363969 | 4.2:+4882066 | None:intergenic |
| TTGTCTAACAATGATTTAGA+AGG | 0.367467 | 4.2:-4883756 | MS.gene91158:CDS |
| GTGTAATTATGCATTTGATT+TGG | 0.370580 | 4.2:-4883379 | MS.gene91158:CDS |
| CCTTCCGATGTTTACAGCTT+TGG | 0.376086 | 4.2:-4881980 | MS.gene91158:CDS |
| TGAACAAGTTTCCACCTTCA+AGG | 0.381417 | 4.2:-4884224 | MS.gene91158:CDS |
| TTACTTGGGATTGTAGCATT+TGG | 0.382493 | 4.2:-4883552 | MS.gene91158:CDS |
| TTCCCAACAAATGCCGAATC+AGG | 0.382846 | 4.2:+4883705 | None:intergenic |
| AGTATTGTTGGTAGTTTACT+TGG | 0.383806 | 4.2:-4883567 | MS.gene91158:CDS |
| CTCAAAATCCTTCTTTCCTA+AGG | 0.390823 | 4.2:+4883242 | None:intergenic |
| CTAATTTGACTCAGCTTGCT+GGG | 0.399236 | 4.2:-4883852 | MS.gene91158:intron |
| TAATAAACTGACTTTCTTTG+AGG | 0.409485 | 4.2:-4883403 | MS.gene91158:CDS |
| GTGCTGGGAAAGGGAACATT+TGG | 0.411675 | 4.2:-4883330 | MS.gene91158:CDS |
| TTCCAAAGATGAGAAACTTA+TGG | 0.419459 | 4.2:-4883154 | MS.gene91158:CDS |
| TTCTTCCAAACTGAGAAATC+AGG | 0.420006 | 4.2:+4883934 | None:intergenic |
| AGGACAAGGTGCCATTAGAT+TGG | 0.420460 | 4.2:-4882243 | MS.gene91158:CDS |
| TTAGATCCAATTTAATATCT+GGG | 0.426208 | 4.2:-4884035 | MS.gene91158:CDS |
| ACTCGGTTGAGAATAGCTTT+AGG | 0.427720 | 4.2:-4882217 | MS.gene91158:CDS |
| AATAAACTGACTTTCTTTGA+GGG | 0.432127 | 4.2:-4883402 | MS.gene91158:CDS |
| ATCACCACCGGTTGTGTGGA+TGG | 0.433475 | 4.2:+4881922 | None:intergenic |
| GCTAAGTGAAACAGCACTGC+TGG | 0.434019 | 4.2:-4883595 | MS.gene91158:CDS |
| CTGCTGGGAATTAGTATTGT+TGG | 0.434540 | 4.2:-4883579 | MS.gene91158:CDS |
| TTCACAACTTCTGACATCTT+AGG | 0.437254 | 4.2:+4881737 | None:intergenic |
| TTGTCTAACAACAAATTCAA+TGG | 0.437684 | 4.2:-4883895 | MS.gene91158:CDS |
| ATTACTGAGATTTCCTGATT+CGG | 0.441976 | 4.2:-4883718 | MS.gene91158:CDS |
| AACTTCAGGTGCTCGGTAAC+CGG | 0.444642 | 4.2:+4882027 | None:intergenic |
| GAGCAATATATGGAGATTGT+TGG | 0.445329 | 4.2:-4883222 | MS.gene91158:CDS |
| TTCCTGATTCGGCATTTGTT+GGG | 0.448825 | 4.2:-4883707 | MS.gene91158:CDS |
| TTCCAATTCAAAGTCCTTGA+AGG | 0.451341 | 4.2:+4884210 | None:intergenic |
| GTAACCGGCCGCGCGTGAGA+TGG | 0.454374 | 4.2:+4882042 | None:intergenic |
| GCTATTCGTTTACCTGGTGT+TGG | 0.454969 | 4.2:-4884120 | MS.gene91158:CDS |
| CTCGAAGAAGGCTCATAAAC+CGG | 0.458928 | 4.2:+4883636 | None:intergenic |
| TAATTATGCATTTGATTTGG+AGG | 0.460683 | 4.2:-4883376 | MS.gene91158:CDS |
| TTCAGTTCAATAATTTATCT+GGG | 0.461857 | 4.2:-4883963 | MS.gene91158:CDS |
| TTTGTTGGAAAGTCGAATAA+GGG | 0.464394 | 4.2:-4883471 | MS.gene91158:CDS |
| TATGGCTGTGTATCTGATCT+TGG | 0.465318 | 4.2:-4882097 | MS.gene91158:CDS |
| AGAATTGAGAAAGATATTTG+AGG | 0.465869 | 4.2:+4882126 | None:intergenic |
| GTTGGGAATAACATTACTCT+AGG | 0.465986 | 4.2:-4883690 | MS.gene91158:CDS |
| ATGAGAATTTCAGGGAAAAG+AGG | 0.471282 | 4.2:-4882268 | MS.gene91158:intron |
| AACCGAGTATCCCAATCTAA+TGG | 0.472741 | 4.2:+4882232 | None:intergenic |
| AGATCATTCACTTGGTGAGA+TGG | 0.473981 | 4.2:-4881898 | MS.gene91158:CDS |
| GGAAGTAGCCTTAGGAAAGA+AGG | 0.474361 | 4.2:-4883250 | MS.gene91158:CDS |
| CCTCCTTGATTCTCAGATGA+TGG | 0.474874 | 4.2:+4881671 | None:intergenic |
| TGACCCTGTTGAAGATAAAG+AGG | 0.476973 | 4.2:-4884262 | MS.gene91158:CDS |
| TCTGTTTGTGATAATTGGAC+TGG | 0.477768 | 4.2:-4884177 | MS.gene91158:CDS |
| AGTGTCTCTTCTTTGTTGCA+TGG | 0.483641 | 4.2:-4883108 | MS.gene91158:intron |
| TTCTGCTGAGGTGCTGGGAA+AGG | 0.484409 | 4.2:-4883340 | MS.gene91158:CDS |
| TAACCGGCCGCGCGTGAGAT+GGG | 0.485648 | 4.2:+4882043 | None:intergenic |
| TCTGCTGAGGTGCTGGGAAA+GGG | 0.487632 | 4.2:-4883339 | MS.gene91158:CDS |
| GACATCTTAGGCCTCTGATC+AGG | 0.488318 | 4.2:+4881749 | None:intergenic |
| AAATCGCCCATCCACACAAC+CGG | 0.488844 | 4.2:-4881929 | MS.gene91158:CDS |
| AGATTGAAGGAAGTAGCCTT+AGG | 0.490595 | 4.2:-4883258 | MS.gene91158:CDS |
| GTGTTACTTGCAATGAAGAT+AGG | 0.491269 | 4.2:-4884155 | MS.gene91158:CDS |
| GATCATTCACTTGGTGAGAT+GGG | 0.493328 | 4.2:-4881897 | MS.gene91158:CDS |
| TTTCCTGATTCGGCATTTGT+TGG | 0.495372 | 4.2:-4883708 | MS.gene91158:CDS |
| GGACAAGGTGCCATTAGATT+GGG | 0.508875 | 4.2:-4882242 | MS.gene91158:CDS |
| ATTGCAGAAACTACTTGAAG+TGG | 0.509572 | 4.2:-4884346 | MS.gene91158:CDS |
| TCACCACCGGTTGTGTGGAT+GGG | 0.511038 | 4.2:+4881923 | None:intergenic |
| GTATTACTAGAGCTTCTGAC+CGG | 0.511963 | 4.2:-4881953 | MS.gene91158:CDS |
| GTTATAGCTATTCGTTTACC+TGG | 0.517517 | 4.2:-4884126 | MS.gene91158:CDS |
| CGGCCGCGCGTGAGATGGGT+AGG | 0.519525 | 4.2:+4882047 | None:intergenic |
| TGTTTCGCCTGTGCTTTCGC+CGG | 0.521688 | 4.2:-4883655 | MS.gene91158:CDS |
| GCTCAAATCCATGTCGAGAA+TGG | 0.523276 | 4.2:-4882178 | MS.gene91158:CDS |
| TCATAAACCGGCGAAAGCAC+AGG | 0.524017 | 4.2:+4883648 | None:intergenic |
| CAGCCATCATCTGAGAATCA+AGG | 0.528028 | 4.2:-4881674 | MS.gene91158:CDS |
| CTTCGGCCGTCCACTCCTCT+CGG | 0.529755 | 4.2:+4881861 | None:intergenic |
| CTACCCATCTCACGCGCGGC+CGG | 0.530610 | 4.2:-4882046 | MS.gene91158:CDS |
| CGGTTTATGAGCCTTCTTCG+AGG | 0.531583 | 4.2:-4883635 | MS.gene91158:CDS |
| AGAGCTTCTGCTGAGGTGCT+GGG | 0.540710 | 4.2:-4883345 | MS.gene91158:CDS |
| CGTTTCTCAGACCTCGAAGA+AGG | 0.542660 | 4.2:+4883624 | None:intergenic |
| TGCCATTAGATTGGGATACT+CGG | 0.545730 | 4.2:-4882234 | MS.gene91158:CDS |
| GTATTGTTGGTAGTTTACTT+GGG | 0.554199 | 4.2:-4883566 | MS.gene91158:CDS |
| TGCTTATAAGGCGATTCTTG+AGG | 0.555190 | 4.2:-4883304 | MS.gene91158:CDS |
| AGGGAAAAGAGGAGAGGACA+AGG | 0.555244 | 4.2:-4882257 | MS.gene91158:CDS |
| AAAAGCAGTTTCGAGGAACA+TGG | 0.557721 | 4.2:-4883433 | MS.gene91158:CDS |
| CTAAGTGAAACAGCACTGCT+GGG | 0.570553 | 4.2:-4883594 | MS.gene91158:CDS |
| TGAGAATGTAGTTGAGCTCA+AGG | 0.573073 | 4.2:-4883187 | MS.gene91158:CDS |
| CAATTCAAAGTCCTTGAAGG+TGG | 0.577153 | 4.2:+4884213 | None:intergenic |
| TTGAGGACTTGATGTTGCCA+TGG | 0.579701 | 4.2:+4882143 | None:intergenic |
| AGGTTACTAATAGTATTTGG+TGG | 0.582558 | 4.2:+4884081 | None:intergenic |
| ATTCAGTTGTCCGAGAGGAG+TGG | 0.583733 | 4.2:-4881871 | MS.gene91158:CDS |
| ATAAACTGACTTTCTTTGAG+GGG | 0.591015 | 4.2:-4883401 | MS.gene91158:CDS |
| TGTCTGTAACTTCAGGTGCT+CGG | 0.591977 | 4.2:+4882020 | None:intergenic |
| TCCAAACATAGAAGAAGAGA+TGG | 0.594545 | 4.2:-4881813 | MS.gene91158:CDS |
| GTCAAATTAGAGAGCGAAAG+CGG | 0.597009 | 4.2:+4883865 | None:intergenic |
| TCAGAATTTCAAGAGCTGAA+AGG | 0.597819 | 4.2:+4884061 | None:intergenic |
| TATTACTAGAGCTTCTGACC+GGG | 0.597983 | 4.2:-4881952 | MS.gene91158:CDS |
| TTTGTTGAGAGCTTCTGCTG+AGG | 0.599980 | 4.2:-4883352 | MS.gene91158:CDS |
| GTTTACCGCCATTCTCGACA+TGG | 0.600016 | 4.2:+4882170 | None:intergenic |
| GGCCGCGCGTGAGATGGGTA+GGG | 0.601953 | 4.2:+4882048 | None:intergenic |
| CACCTGAAGTTACAGACACA+AGG | 0.602591 | 4.2:-4882015 | MS.gene91158:CDS |
| GTGAATGATCTCATCACCAC+CGG | 0.603856 | 4.2:+4881910 | None:intergenic |
| CCAAAGCTGTAAACATCGGA+AGG | 0.604118 | 4.2:+4881980 | None:intergenic |
| GGTTGTTGTGAAGAGATTGA+AGG | 0.615357 | 4.2:-4883271 | MS.gene91158:CDS |
| TGAGATGGGTAGGGCAAGTG+AGG | 0.623595 | 4.2:+4882057 | None:intergenic |
| TCTCATCACCACCGGTTGTG+TGG | 0.624590 | 4.2:+4881918 | None:intergenic |
| GTATATGATTACTACAGCCG+AGG | 0.625000 | 4.2:-4883132 | MS.gene91158:CDS |
| TCTTCGAGGTCTGAGAAACG+TGG | 0.625116 | 4.2:-4883621 | MS.gene91158:CDS |
| AATGGCGGTAAACTTGTCCA+TGG | 0.625338 | 4.2:-4882160 | MS.gene91158:CDS |
| CTTCGAGGTCTGAGAAACGT+GGG | 0.643381 | 4.2:-4883620 | MS.gene91158:CDS |
| GTAAACATCGGAAGGTTGTG+CGG | 0.644794 | 4.2:+4881988 | None:intergenic |
| CAACTCTAAGTCAAACACTT+CGG | 0.645648 | 4.2:+4881844 | None:intergenic |
| ACAAAGAAGAGACACTCCCT+CGG | 0.646888 | 4.2:+4883115 | None:intergenic |
| AGTTGTCCGAGAGGAGTGGA+CGG | 0.652835 | 4.2:-4881867 | MS.gene91158:CDS |
| CAAATCCATGTCGAGAATGG+CGG | 0.657401 | 4.2:-4882175 | MS.gene91158:CDS |
| GGTTCATTCAGTTGTCCGAG+AGG | 0.661987 | 4.2:-4881876 | MS.gene91158:CDS |
| TCGCCCATCCACACAACCGG+TGG | 0.663361 | 4.2:-4881926 | MS.gene91158:CDS |
| TTGCCATTAAATCCAACACC+AGG | 0.664373 | 4.2:+4884108 | None:intergenic |
| GATTCTTGAGGACGCGACTG+CGG | 0.668930 | 4.2:-4883292 | MS.gene91158:CDS |
| ATAGCTTTAGGTGCAGCAAG+AGG | 0.671199 | 4.2:-4882205 | MS.gene91158:CDS |
| AACGCCAAAGCTGTAAACAT+CGG | 0.671248 | 4.2:+4881976 | None:intergenic |
| CGAGGTCTGAGAAACGTGGG+AGG | 0.675795 | 4.2:-4883617 | MS.gene91158:CDS |
| TGCCCTACCCATCTCACGCG+CGG | 0.677597 | 4.2:-4882050 | MS.gene91158:CDS |
| AATTTCAGGGAAAAGAGGAG+AGG | 0.677730 | 4.2:-4882263 | MS.gene91158:intron |
| TATATGATTACTACAGCCGA+GGG | 0.681402 | 4.2:-4883131 | MS.gene91158:CDS |
| AAACCTCTTTATCTTCAACA+GGG | 0.686853 | 4.2:+4884259 | None:intergenic |
| TGGTGATGAGATCATTCACT+TGG | 0.690340 | 4.2:-4881906 | MS.gene91158:CDS |
| TGGTAAGAATGCCTGATCAG+AGG | 0.693311 | 4.2:-4881760 | MS.gene91158:CDS |
| GCAGATAGCTATGTCATGTG+TGG | 0.721419 | 4.2:-4881780 | MS.gene91158:CDS |
| GTATTGTTGTGTATATGGCA+AGG | 0.722730 | 4.2:-4884291 | MS.gene91158:CDS |
| CCATCATCTGAGAATCAAGG+AGG | 0.749831 | 4.2:-4881671 | MS.gene91158:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATCCATTTTAATGATATTA+TGG | + | chr4.2:4883245-4883264 | None:intergenic | 15.0% |
| !!! | TGTTTTTCATGAAAAAAAAA+AGG | - | chr4.2:4882950-4882969 | MS.gene91158:intron | 15.0% |
| !! | AAAAAACCCAGATATTAAAT+TGG | + | chr4.2:4881909-4881928 | None:intergenic | 20.0% |
| !! | GCAATTTCATATATTTACTA+CGG | - | chr4.2:4882874-4882893 | MS.gene91158:intron | 20.0% |
| !! | TAAATATATGAAATTGCAAC+TGG | + | chr4.2:4882871-4882890 | None:intergenic | 20.0% |
| !! | TTAGATCCAATTTAATATCT+GGG | - | chr4.2:4881900-4881919 | MS.gene91158:CDS | 20.0% |
| !! | TTCAGTTCAATAATTTATCT+GGG | - | chr4.2:4881972-4881991 | MS.gene91158:CDS | 20.0% |
| !! | TTGAAGTTTGAAAATATAGT+TGG | - | chr4.2:4883083-4883102 | MS.gene91158:intron | 20.0% |
| !! | TTTCTCAATTCTAAACAATA+TGG | - | chr4.2:4883820-4883839 | MS.gene91158:intron | 20.0% |
| !!! | AAAAGACAAGTTTTTTAGAT+TGG | + | chr4.2:4881945-4881964 | None:intergenic | 20.0% |
| !!! | AAGATAAGTTTTTCCATAAA+TGG | - | chr4.2:4883565-4883584 | MS.gene91158:CDS | 20.0% |
| !!! | ATTAGGAATATCTACATTTT+AGG | - | chr4.2:4883219-4883238 | MS.gene91158:CDS | 20.0% |
| ! | AGAATTGAGAAAGATATTTG+AGG | + | chr4.2:4883812-4883831 | None:intergenic | 25.0% |
| ! | AGGCCATAATATCATTAAAA+TGG | - | chr4.2:4883239-4883258 | MS.gene91158:CDS | 25.0% |
| ! | ATTGCAACTGGTTAAAATAA+AGG | + | chr4.2:4882859-4882878 | None:intergenic | 25.0% |
| ! | CTTAGATCCAATTTAATATC+TGG | - | chr4.2:4881899-4881918 | MS.gene91158:CDS | 25.0% |
| ! | CTTCAGTTCAATAATTTATC+TGG | - | chr4.2:4881971-4881990 | MS.gene91158:CDS | 25.0% |
| ! | GAAAGGTTACTAATAGTATT+TGG | + | chr4.2:4881860-4881879 | None:intergenic | 25.0% |
| ! | GTAGCTACTAACAATTAAAT+GGG | - | chr4.2:4883041-4883060 | MS.gene91158:intron | 25.0% |
| ! | GTGTAATTATGCATTTGATT+TGG | - | chr4.2:4882556-4882575 | MS.gene91158:intron | 25.0% |
| ! | TGTAGCTACTAACAATTAAA+TGG | - | chr4.2:4883040-4883059 | MS.gene91158:intron | 25.0% |
| ! | TTATGACAAGTTTCCATTTA+TGG | + | chr4.2:4883581-4883600 | None:intergenic | 25.0% |
| ! | TTCCATGATGTTTATTATCA+TGG | + | chr4.2:4883485-4883504 | None:intergenic | 25.0% |
| ! | TTGTCTAACAACAAATTCAA+TGG | - | chr4.2:4882040-4882059 | MS.gene91158:CDS | 25.0% |
| ! | TTGTCTAACAATGATTTAGA+AGG | - | chr4.2:4882179-4882198 | MS.gene91158:CDS | 25.0% |
| ! | TTTAGATTGGAAAAATCAGA+AGG | + | chr4.2:4881932-4881951 | None:intergenic | 25.0% |
| ! | TTTGCTTTATGAGAATTTCA+GGG | - | chr4.2:4883659-4883678 | MS.gene91158:CDS | 25.0% |
| !! | AATAAACTGACTTTCTTTGA+GGG | - | chr4.2:4882533-4882552 | MS.gene91158:intron | 25.0% |
| !! | TAATAAACTGACTTTCTTTG+AGG | - | chr4.2:4882532-4882551 | MS.gene91158:intron | 25.0% |
| !! | TACATGTTTTCAGAAACATT+AGG | - | chr4.2:4883202-4883221 | MS.gene91158:CDS | 25.0% |
| !! | TCATTAAAATGGATTTGATG+TGG | - | chr4.2:4883250-4883269 | MS.gene91158:CDS | 25.0% |
| !! | TTTTGCTTTATGAGAATTTC+AGG | - | chr4.2:4883658-4883677 | MS.gene91158:CDS | 25.0% |
| !!! | TAATTATGCATTTGATTTGG+AGG | - | chr4.2:4882559-4882578 | MS.gene91158:intron | 25.0% |
| AAAACCTCTTTATCTTCAAC+AGG | + | chr4.2:4881680-4881699 | None:intergenic | 30.0% | |
| AAACCTCTTTATCTTCAACA+GGG | + | chr4.2:4881679-4881698 | None:intergenic | 30.0% | |
| AAACTACTTGAAGTGGAAAA+AGG | - | chr4.2:4881596-4881615 | MS.gene91158:CDS | 30.0% | |
| AACATTTGGTACTGCTTATA+AGG | - | chr4.2:4882619-4882638 | MS.gene91158:intron | 30.0% | |
| AACCTTGAGAAATGAATATC+AGG | + | chr4.2:4882146-4882165 | None:intergenic | 30.0% | |
| AGGTTACTAATAGTATTTGG+TGG | + | chr4.2:4881857-4881876 | None:intergenic | 30.0% | |
| ATTACTGAGATTTCCTGATT+CGG | - | chr4.2:4882217-4882236 | MS.gene91158:CDS | 30.0% | |
| CAGAAAGAGAATTATTTGCA+AGG | + | chr4.2:4882115-4882134 | None:intergenic | 30.0% | |
| CATGATGTTTATTATCATGG+AGG | + | chr4.2:4883482-4883501 | None:intergenic | 30.0% | |
| CTCCATGATAATAAACATCA+TGG | - | chr4.2:4883480-4883499 | MS.gene91158:CDS | 30.0% | |
| CTTGCAAATAATTCTCTTTC+TGG | - | chr4.2:4882113-4882132 | MS.gene91158:CDS | 30.0% | |
| GAAGTTCACAATCTTACATA+GGG | - | chr4.2:4883502-4883521 | MS.gene91158:CDS | 30.0% | |
| GGAAATCTCAGTAATGATTT+AGG | + | chr4.2:4882212-4882231 | None:intergenic | 30.0% | |
| GTGCTTATTTCATATGTCTA+TGG | - | chr4.2:4882924-4882943 | MS.gene91158:intron | 30.0% | |
| GTTCTTCTGTTTGTGATAAT+TGG | - | chr4.2:4881753-4881772 | MS.gene91158:CDS | 30.0% | |
| TACCATAAGTTTCTCATCTT+TGG | + | chr4.2:4882786-4882805 | None:intergenic | 30.0% | |
| TATGCGTATTGTTGTGTATA+TGG | - | chr4.2:4881639-4881658 | MS.gene91158:CDS | 30.0% | |
| TATTCATTTCTCAAGGTTAC+AGG | - | chr4.2:4882148-4882167 | MS.gene91158:CDS | 30.0% | |
| TTCCAAAGATGAGAAACTTA+TGG | - | chr4.2:4882781-4882800 | MS.gene91158:intron | 30.0% | |
| TTCCTGATATTCATTTCTCA+AGG | - | chr4.2:4882141-4882160 | MS.gene91158:CDS | 30.0% | |
| TTTGTTGGAAAGTCGAATAA+GGG | - | chr4.2:4882464-4882483 | MS.gene91158:intron | 30.0% | |
| ! | ATAAACTGACTTTCTTTGAG+GGG | - | chr4.2:4882534-4882553 | MS.gene91158:intron | 30.0% |
| ! | ATTTGTTGGAAAGTCGAATA+AGG | - | chr4.2:4882463-4882482 | MS.gene91158:intron | 30.0% |
| ! | GAAGGATTTTGAGCAATATA+TGG | - | chr4.2:4882703-4882722 | MS.gene91158:intron | 30.0% |
| ! | TATGATGATGATGCATTTGT+TGG | - | chr4.2:4882449-4882468 | MS.gene91158:intron | 30.0% |
| !! | AGTATTGTTGGTAGTTTACT+TGG | - | chr4.2:4882368-4882387 | MS.gene91158:intron | 30.0% |
| !! | GTATTGTTGGTAGTTTACTT+GGG | - | chr4.2:4882369-4882388 | MS.gene91158:intron | 30.0% |
| ACCATCTCTTCTTCTATGTT+TGG | + | chr4.2:4884126-4884145 | None:intergenic | 35.0% | |
| ACTTCGACAAATTGAGTACT+CGG | + | chr4.2:4883337-4883356 | None:intergenic | 35.0% | |
| ATGAGAATTTCAGGGAAAAG+AGG | - | chr4.2:4883667-4883686 | MS.gene91158:CDS | 35.0% | |
| ATTGCAGAAACTACTTGAAG+TGG | - | chr4.2:4881589-4881608 | MS.gene91158:CDS | 35.0% | |
| CAACTCTAAGTCAAACACTT+CGG | + | chr4.2:4884094-4884113 | None:intergenic | 35.0% | |
| CTCAAAATCCTTCTTTCCTA+AGG | + | chr4.2:4882696-4882715 | None:intergenic | 35.0% | |
| GAATAAGGGAAAAATGTCTC+CGG | - | chr4.2:4882478-4882497 | MS.gene91158:intron | 35.0% | |
| GAGCAATATATGGAGATTGT+TGG | - | chr4.2:4882713-4882732 | MS.gene91158:intron | 35.0% | |
| GGAAGTTCACAATCTTACAT+AGG | - | chr4.2:4883501-4883520 | MS.gene91158:CDS | 35.0% | |
| GTATTGTTGTGTATATGGCA+AGG | - | chr4.2:4881644-4881663 | MS.gene91158:CDS | 35.0% | |
| GTTATAGCTATTCGTTTACC+TGG | - | chr4.2:4881809-4881828 | MS.gene91158:CDS | 35.0% | |
| GTTGGGAATAACATTACTCT+AGG | - | chr4.2:4882245-4882264 | MS.gene91158:CDS | 35.0% | |
| TATATGATTACTACAGCCGA+GGG | - | chr4.2:4882804-4882823 | MS.gene91158:intron | 35.0% | |
| TCAGAATTTCAAGAGCTGAA+AGG | + | chr4.2:4881877-4881896 | None:intergenic | 35.0% | |
| TCCAAACATAGAAGAAGAGA+TGG | - | chr4.2:4884122-4884141 | MS.gene91158:CDS | 35.0% | |
| TCTGTTTGTGATAATTGGAC+TGG | - | chr4.2:4881758-4881777 | MS.gene91158:CDS | 35.0% | |
| TTACTTGGGATTGTAGCATT+TGG | - | chr4.2:4882383-4882402 | MS.gene91158:intron | 35.0% | |
| TTCACAACTTCTGACATCTT+AGG | + | chr4.2:4884201-4884220 | None:intergenic | 35.0% | |
| TTCCAATTCAAAGTCCTTGA+AGG | + | chr4.2:4881728-4881747 | None:intergenic | 35.0% | |
| TTCTTCCAAACTGAGAAATC+AGG | + | chr4.2:4882004-4882023 | None:intergenic | 35.0% | |
| ! | AACAATCTCTGTAGTTGATG+AGG | - | chr4.2:4883295-4883314 | MS.gene91158:CDS | 35.0% |
| ! | ATTCACTTCCTTTTGGTAAG+GGG | + | chr4.2:4884350-4884369 | None:intergenic | 35.0% |
| ! | CATTCACTTCCTTTTGGTAA+GGG | + | chr4.2:4884351-4884370 | None:intergenic | 35.0% |
| ! | TCATTCACTTCCTTTTGGTA+AGG | + | chr4.2:4884352-4884371 | None:intergenic | 35.0% |
| ! | TTACCTGGTGTTGGATTTAA+TGG | - | chr4.2:4881824-4881843 | MS.gene91158:CDS | 35.0% |
| !! | GTGTTACTTGCAATGAAGAT+AGG | - | chr4.2:4881780-4881799 | MS.gene91158:CDS | 35.0% |
| AAAAGCAGTTTCGAGGAACA+TGG | - | chr4.2:4882502-4882521 | MS.gene91158:intron | 40.0% | |
| AACCGAGTATCCCAATCTAA+TGG | + | chr4.2:4883706-4883725 | None:intergenic | 40.0% | |
| AACGCCAAAGCTGTAAACAT+CGG | + | chr4.2:4883962-4883981 | None:intergenic | 40.0% | |
| AATTTCAGGGAAAAGAGGAG+AGG | - | chr4.2:4883672-4883691 | MS.gene91158:CDS | 40.0% | |
| ACTCGGTTGAGAATAGCTTT+AGG | - | chr4.2:4883718-4883737 | MS.gene91158:CDS | 40.0% | |
| AGATTGAAGGAAGTAGCCTT+AGG | - | chr4.2:4882677-4882696 | MS.gene91158:intron | 40.0% | |
| AGTGTCTCTTCTTTGTTGCA+TGG | - | chr4.2:4882827-4882846 | MS.gene91158:intron | 40.0% | |
| CAATTCAAAGTCCTTGAAGG+TGG | + | chr4.2:4881725-4881744 | None:intergenic | 40.0% | |
| CACCTTCAAGGACTTTGAAT+TGG | - | chr4.2:4881723-4881742 | MS.gene91158:CDS | 40.0% | |
| CTGCTGGGAATTAGTATTGT+TGG | - | chr4.2:4882356-4882375 | MS.gene91158:intron | 40.0% | |
| CTTTGCCTGATTTCTCAGTT+TGG | - | chr4.2:4881996-4882015 | MS.gene91158:CDS | 40.0% | |
| GAGTACTCAATTTGTCGAAG+TGG | - | chr4.2:4883336-4883355 | MS.gene91158:CDS | 40.0% | |
| GGTTGTTGTGAAGAGATTGA+AGG | - | chr4.2:4882664-4882683 | MS.gene91158:intron | 40.0% | |
| GTATATGATTACTACAGCCG+AGG | - | chr4.2:4882803-4882822 | MS.gene91158:intron | 40.0% | |
| GTATTACTAGAGCTTCTGAC+CGG | - | chr4.2:4883982-4884001 | MS.gene91158:CDS | 40.0% | |
| GTCAAATTAGAGAGCGAAAG+CGG | + | chr4.2:4882073-4882092 | None:intergenic | 40.0% | |
| TATGGCTGTGTATCTGATCT+TGG | - | chr4.2:4883838-4883857 | MS.gene91158:intron | 40.0% | |
| TATTACTAGAGCTTCTGACC+GGG | - | chr4.2:4883983-4884002 | MS.gene91158:CDS | 40.0% | |
| TCTAATTTGACTCAGCTTGC+TGG | - | chr4.2:4882082-4882101 | MS.gene91158:CDS | 40.0% | |
| TGAACAAGTTTCCACCTTCA+AGG | - | chr4.2:4881711-4881730 | MS.gene91158:CDS | 40.0% | |
| TGACCCTGTTGAAGATAAAG+AGG | - | chr4.2:4881673-4881692 | MS.gene91158:CDS | 40.0% | |
| TGAGAATGTAGTTGAGCTCA+AGG | - | chr4.2:4882748-4882767 | MS.gene91158:intron | 40.0% | |
| TGCCATTAGATTGGGATACT+CGG | - | chr4.2:4883701-4883720 | MS.gene91158:CDS | 40.0% | |
| TGCTTATAAGGCGATTCTTG+AGG | - | chr4.2:4882631-4882650 | MS.gene91158:intron | 40.0% | |
| TTCCTTGTGTCTGTAACTTC+AGG | + | chr4.2:4883925-4883944 | None:intergenic | 40.0% | |
| TTGCCATTAAATCCAACACC+AGG | + | chr4.2:4881830-4881849 | None:intergenic | 40.0% | |
| ! | AGATCATTCACTTGGTGAGA+TGG | - | chr4.2:4884037-4884056 | MS.gene91158:CDS | 40.0% |
| ! | CTAATTTGACTCAGCTTGCT+GGG | - | chr4.2:4882083-4882102 | MS.gene91158:CDS | 40.0% |
| ! | GATCATTCACTTGGTGAGAT+GGG | - | chr4.2:4884038-4884057 | MS.gene91158:CDS | 40.0% |
| ! | TGGTGATGAGATCATTCACT+TGG | - | chr4.2:4884029-4884048 | MS.gene91158:CDS | 40.0% |
| ! | TTCACTTCCTTTTGGTAAGG+GGG | + | chr4.2:4884349-4884368 | None:intergenic | 40.0% |
| !! | GTGTTGCTGCTCTAGAAAAA+AGG | - | chr4.2:4882421-4882440 | MS.gene91158:intron | 40.0% |
| !! | TCTCTGTAGTTGATGAGGAT+AGG | - | chr4.2:4883300-4883319 | MS.gene91158:CDS | 40.0% |
| !! | TTCCTGATTCGGCATTTGTT+GGG | - | chr4.2:4882228-4882247 | MS.gene91158:CDS | 40.0% |
| !! | TTTCCTGATTCGGCATTTGT+TGG | - | chr4.2:4882227-4882246 | MS.gene91158:CDS | 40.0% |
| !!! | TTCCTCGAAACTGCTTTTTC+CGG | + | chr4.2:4882500-4882519 | None:intergenic | 40.0% |
| AATGGCGGTAAACTTGTCCA+TGG | - | chr4.2:4883775-4883794 | MS.gene91158:CDS | 45.0% | |
| ACAAAGAAGAGACACTCCCT+CGG | + | chr4.2:4882823-4882842 | None:intergenic | 45.0% | |
| ACTTCATCCCCCTTACCAAA+AGG | - | chr4.2:4884339-4884358 | MS.gene91158:CDS | 45.0% | |
| CAAATCCATGTCGAGAATGG+CGG | - | chr4.2:4883760-4883779 | MS.gene91158:CDS | 45.0% | |
| CACCTGAAGTTACAGACACA+AGG | - | chr4.2:4883920-4883939 | MS.gene91158:CDS | 45.0% | |
| CAGCCATCATCTGAGAATCA+AGG | - | chr4.2:4884261-4884280 | MS.gene91158:CDS | 45.0% | |
| CCAAAGCTGTAAACATCGGA+AGG | + | chr4.2:4883958-4883977 | None:intergenic | 45.0% | |
| CCATCATCTGAGAATCAAGG+AGG | - | chr4.2:4884264-4884283 | MS.gene91158:CDS | 45.0% | |
| CCTCCTTGATTCTCAGATGA+TGG | + | chr4.2:4884267-4884286 | None:intergenic | 45.0% | |
| CCTTCCGATGTTTACAGCTT+TGG | - | chr4.2:4883955-4883974 | MS.gene91158:CDS | 45.0% | |
| CTAAGTGAAACAGCACTGCT+GGG | - | chr4.2:4882341-4882360 | MS.gene91158:intron | 45.0% | |
| CTCGAAGAAGGCTCATAAAC+CGG | + | chr4.2:4882302-4882321 | None:intergenic | 45.0% | |
| GCAGATAGCTATGTCATGTG+TGG | - | chr4.2:4884155-4884174 | MS.gene91158:CDS | 45.0% | |
| GCTATTCGTTTACCTGGTGT+TGG | - | chr4.2:4881815-4881834 | MS.gene91158:CDS | 45.0% | |
| GCTCAAATCCATGTCGAGAA+TGG | - | chr4.2:4883757-4883776 | MS.gene91158:CDS | 45.0% | |
| GTAAACATCGGAAGGTTGTG+CGG | + | chr4.2:4883950-4883969 | None:intergenic | 45.0% | |
| GTGAATGATCTCATCACCAC+CGG | + | chr4.2:4884028-4884047 | None:intergenic | 45.0% | |
| TGGTAAGAATGCCTGATCAG+AGG | - | chr4.2:4884175-4884194 | MS.gene91158:CDS | 45.0% | |
| TGTCTGTAACTTCAGGTGCT+CGG | + | chr4.2:4883918-4883937 | None:intergenic | 45.0% | |
| TTCCCAACAAATGCCGAATC+AGG | + | chr4.2:4882233-4882252 | None:intergenic | 45.0% | |
| TTGAGGACTTGATGTTGCCA+TGG | + | chr4.2:4883795-4883814 | None:intergenic | 45.0% | |
| TTTGTTGAGAGCTTCTGCTG+AGG | - | chr4.2:4882583-4882602 | MS.gene91158:intron | 45.0% | |
| ! | GGAAGTAGCCTTAGGAAAGA+AGG | - | chr4.2:4882685-4882704 | MS.gene91158:intron | 45.0% |
| ! | TTTTGGTAAGGGGGATGAAG+TGG | + | chr4.2:4884340-4884359 | None:intergenic | 45.0% |
| !! | AGGACAAGGTGCCATTAGAT+TGG | - | chr4.2:4883692-4883711 | MS.gene91158:CDS | 45.0% |
| !! | ATAGCTTTAGGTGCAGCAAG+AGG | - | chr4.2:4883730-4883749 | MS.gene91158:CDS | 45.0% |
| !! | GGACAAGGTGCCATTAGATT+GGG | - | chr4.2:4883693-4883712 | MS.gene91158:CDS | 45.0% |
| !! | TAGGGCAAGTGAGGTTGATA+TGG | + | chr4.2:4883872-4883891 | None:intergenic | 45.0% |
| AAATCGCCCATCCACACAAC+CGG | - | chr4.2:4884006-4884025 | MS.gene91158:CDS | 50.0% | |
| AACTTCAGGTGCTCGGTAAC+CGG | + | chr4.2:4883911-4883930 | None:intergenic | 50.0% | |
| AAGGGGGATGAAGTGGAAGA+AGG | + | chr4.2:4884333-4884352 | None:intergenic | 50.0% | |
| AGGGAAAAGAGGAGAGGACA+AGG | - | chr4.2:4883678-4883697 | MS.gene91158:CDS | 50.0% | |
| AGGGGGATGAAGTGGAAGAA+GGG | + | chr4.2:4884332-4884351 | None:intergenic | 50.0% | |
| ATTCAGTTGTCCGAGAGGAG+TGG | - | chr4.2:4884064-4884083 | MS.gene91158:CDS | 50.0% | |
| CGGTTTATGAGCCTTCTTCG+AGG | - | chr4.2:4882300-4882319 | MS.gene91158:intron | 50.0% | |
| CGTTTCTCAGACCTCGAAGA+AGG | + | chr4.2:4882314-4882333 | None:intergenic | 50.0% | |
| CTCCGGAAAAAGCAGTTTCG+AGG | - | chr4.2:4882495-4882514 | MS.gene91158:intron | 50.0% | |
| CTTCGAGGTCTGAGAAACGT+GGG | - | chr4.2:4882315-4882334 | MS.gene91158:intron | 50.0% | |
| GACATCTTAGGCCTCTGATC+AGG | + | chr4.2:4884189-4884208 | None:intergenic | 50.0% | |
| GCTAAGTGAAACAGCACTGC+TGG | - | chr4.2:4882340-4882359 | MS.gene91158:intron | 50.0% | |
| GGTTCATTCAGTTGTCCGAG+AGG | - | chr4.2:4884059-4884078 | MS.gene91158:CDS | 50.0% | |
| GTGCTGGGAAAGGGAACATT+TGG | - | chr4.2:4882605-4882624 | MS.gene91158:intron | 50.0% | |
| GTTTACCGCCATTCTCGACA+TGG | + | chr4.2:4883768-4883787 | None:intergenic | 50.0% | |
| TCTTCGAGGTCTGAGAAACG+TGG | - | chr4.2:4882314-4882333 | MS.gene91158:intron | 50.0% | |
| TGACTGACTGCAGTGACTGT+GGG | - | chr4.2:4883397-4883416 | MS.gene91158:CDS | 50.0% | |
| TTGACTGACTGCAGTGACTG+TGG | - | chr4.2:4883396-4883415 | MS.gene91158:CDS | 50.0% | |
| ! | TCATAAACCGGCGAAAGCAC+AGG | + | chr4.2:4882290-4882309 | None:intergenic | 50.0% |
| AGTTGTCCGAGAGGAGTGGA+CGG | - | chr4.2:4884068-4884087 | MS.gene91158:CDS | 55.0% | |
| GATTCTTGAGGACGCGACTG+CGG | - | chr4.2:4882643-4882662 | MS.gene91158:intron | 55.0% | |
| GGGGGATGAAGTGGAAGAAG+GGG | + | chr4.2:4884331-4884350 | None:intergenic | 55.0% | |
| TGAGATGGGTAGGGCAAGTG+AGG | + | chr4.2:4883881-4883900 | None:intergenic | 55.0% | |
| TGTGTGGATGGGCGATTTCC+CGG | + | chr4.2:4884004-4884023 | None:intergenic | 55.0% | |
| TGTTTCGCCTGTGCTTTCGC+CGG | - | chr4.2:4882280-4882299 | MS.gene91158:intron | 55.0% | |
| ! | AGAGCTTCTGCTGAGGTGCT+GGG | - | chr4.2:4882590-4882609 | MS.gene91158:intron | 55.0% |
| ! | ATCACCACCGGTTGTGTGGA+TGG | + | chr4.2:4884016-4884035 | None:intergenic | 55.0% |
| ! | TCACCACCGGTTGTGTGGAT+GGG | + | chr4.2:4884015-4884034 | None:intergenic | 55.0% |
| ! | TCTCATCACCACCGGTTGTG+TGG | + | chr4.2:4884020-4884039 | None:intergenic | 55.0% |
| !! | TCTGCTGAGGTGCTGGGAAA+GGG | - | chr4.2:4882596-4882615 | MS.gene91158:intron | 55.0% |
| !! | TTCTGCTGAGGTGCTGGGAA+AGG | - | chr4.2:4882595-4882614 | MS.gene91158:intron | 55.0% |
| CGAGGTCTGAGAAACGTGGG+AGG | - | chr4.2:4882318-4882337 | MS.gene91158:intron | 60.0% | |
| GAGAGCTTCTGCTGAGGTGC+TGG | - | chr4.2:4882589-4882608 | MS.gene91158:intron | 60.0% | |
| CTTCGGCCGTCCACTCCTCT+CGG | + | chr4.2:4884077-4884096 | None:intergenic | 65.0% | |
| TAACCGGCCGCGCGTGAGAT+GGG | + | chr4.2:4883895-4883914 | None:intergenic | 65.0% | |
| TCGCCCATCCACACAACCGG+TGG | - | chr4.2:4884009-4884028 | MS.gene91158:CDS | 65.0% | |
| TGCCCTACCCATCTCACGCG+CGG | - | chr4.2:4883885-4883904 | MS.gene91158:CDS | 65.0% | |
| CTACCCATCTCACGCGCGGC+CGG | - | chr4.2:4883889-4883908 | MS.gene91158:CDS | 70.0% | |
| GGCCGCGCGTGAGATGGGTA+GGG | + | chr4.2:4883890-4883909 | None:intergenic | 70.0% | |
| GTAACCGGCCGCGCGTGAGA+TGG | + | chr4.2:4883896-4883915 | None:intergenic | 70.0% | |
| CGGCCGCGCGTGAGATGGGT+AGG | + | chr4.2:4883891-4883910 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 4881586 | 4884371 | 4881586 | ID=MS.gene91158 |
| chr4.2 | mRNA | 4881586 | 4884371 | 4881586 | ID=MS.gene91158.t1;Parent=MS.gene91158 |
| chr4.2 | exon | 4883853 | 4884371 | 4883853 | ID=MS.gene91158.t1.exon1;Parent=MS.gene91158.t1 |
| chr4.2 | CDS | 4883853 | 4884371 | 4883853 | ID=cds.MS.gene91158.t1;Parent=MS.gene91158.t1 |
| chr4.2 | exon | 4883109 | 4883794 | 4883109 | ID=MS.gene91158.t1.exon2;Parent=MS.gene91158.t1 |
| chr4.2 | CDS | 4883109 | 4883794 | 4883109 | ID=cds.MS.gene91158.t1;Parent=MS.gene91158.t1 |
| chr4.2 | exon | 4881586 | 4882277 | 4881586 | ID=MS.gene91158.t1.exon3;Parent=MS.gene91158.t1 |
| chr4.2 | CDS | 4881586 | 4882277 | 4881586 | ID=cds.MS.gene91158.t1;Parent=MS.gene91158.t1 |
| Gene Sequence |
| Protein sequence |
