AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480020403.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020403.01.T01 MTR_4g050250 81.429 420 27 1 1 369 1 420 0.0 680
MsG0480020403.01.T01 MTR_8g058965 59.529 467 130 4 11 427 3 460 0.0 518
MsG0480020403.01.T01 MTR_8g469020 56.304 460 141 6 20 428 6 456 6.94e-169 482
MsG0480020403.01.T01 MTR_8g070950 46.843 491 141 13 4 428 3 439 1.58e-121 360
MsG0480020403.01.T01 MTR_8g062010 46.154 468 155 11 18 427 6 434 1.58e-118 353
MsG0480020403.01.T01 MTR_8g062080 44.309 492 166 12 1 427 1 449 1.68e-115 345
MsG0480020403.01.T01 MTR_8g062310 45.021 482 162 11 1 428 1 433 3.16e-115 344
MsG0480020403.01.T01 MTR_2g083840 38.831 479 210 10 2 423 5 457 9.12e-90 280
MsG0480020403.01.T01 MTR_8g468810 39.381 485 202 13 6 423 4 463 3.12e-86 271
MsG0480020403.01.T01 MTR_8g062300 39.718 496 199 18 8 427 10 481 1.03e-85 270
MsG0480020403.01.T01 MTR_8g058970 37.751 498 212 12 3 423 1 477 1.25e-83 265
MsG0480020403.01.T01 MTR_8g467790 45.013 371 155 16 21 367 148 493 6.75e-80 256
MsG0480020403.01.T01 MTR_8g468760 39.326 445 208 14 12 422 2 418 6.08e-75 240
MsG0480020403.01.T01 MTR_8g014160 38.517 418 209 13 21 423 41 425 3.79e-71 230
MsG0480020403.01.T01 MTR_8g468810 44.214 337 153 9 6 332 4 315 5.79e-70 224
MsG0480020403.01.T01 MTR_8g468810 44.118 340 155 9 6 335 4 318 7.13e-70 225
MsG0480020403.01.T01 MTR_8g468810 44.214 337 153 9 6 332 4 315 9.38e-70 224
MsG0480020403.01.T01 MTR_8g468810 44.214 337 153 9 6 332 4 315 8.21e-69 223
MsG0480020403.01.T01 MTR_8g468840 37.582 455 210 11 21 421 14 448 1.06e-67 222
MsG0480020403.01.T01 MTR_8g062270 35.622 466 212 12 19 422 14 453 1.83e-66 219
MsG0480020403.01.T01 MTR_4g032730 33.607 488 223 10 12 422 3 466 8.31e-66 218
MsG0480020403.01.T01 MTR_8g467800 37.449 486 207 16 8 428 5 458 4.81e-63 210
MsG0480020403.01.T01 MTR_8g014260 33.472 481 227 18 4 423 3 451 3.52e-59 200
MsG0480020403.01.T01 MTR_8g077460 37.890 417 208 15 14 423 3 375 6.07e-59 197
MsG0480020403.01.T01 MTR_8g445780 34.442 421 188 11 11 376 3 390 2.91e-55 188
MsG0480020403.01.T01 MTR_5g092960 39.577 331 171 8 12 332 10 321 7.37e-50 174
MsG0480020403.01.T01 MTR_5g092960 39.577 331 171 8 12 332 10 321 2.26e-49 174
MsG0480020403.01.T01 MTR_5g092960 44.186 86 45 1 337 422 379 461 2.01e-14 75.5
MsG0480020403.01.T01 MTR_8g467800 41.617 334 163 12 8 335 5 312 8.00e-46 162
MsG0480020403.01.T01 MTR_2g086020 59.322 118 46 1 311 428 205 320 8.63e-38 140
MsG0480020403.01.T01 MTR_2g086020 47.134 157 61 5 47 196 1 142 3.43e-31 122
MsG0480020403.01.T01 MTR_5g021550 47.953 171 69 8 5 166 3 162 1.91e-32 120
MsG0480020403.01.T01 MTR_8g014290 42.331 163 80 5 14 167 3 160 2.89e-29 112
MsG0480020403.01.T01 MTR_7g098510 27.964 447 235 14 6 423 3 391 7.57e-28 114
MsG0480020403.01.T01 MTR_4g024710 30.476 315 136 10 167 423 58 347 8.67e-27 110
MsG0480020403.01.T01 MTR_7g056433 28.606 416 246 16 21 423 12 389 9.04e-26 108
MsG0480020403.01.T01 MTR_3g023630 30.435 414 235 17 18 423 5 373 1.16e-25 107
MsG0480020403.01.T01 MTR_7g026500 27.314 443 254 18 3 424 1 396 1.33e-25 108
MsG0480020403.01.T01 MTR_7g033915 25.059 427 226 14 19 422 9 364 6.30e-25 105
MsG0480020403.01.T01 MTR_4g024720 41.209 182 82 6 3 166 2 176 3.83e-24 99.8
MsG0480020403.01.T01 MTR_7g098480 28.111 434 247 13 6 422 3 388 7.18e-24 103
MsG0480020403.01.T01 MTR_3g108150 28.329 413 246 16 21 422 13 386 1.45e-23 102
MsG0480020403.01.T01 MTR_3g099800 56.322 87 37 1 335 420 19 105 3.22e-23 94.0
MsG0480020403.01.T01 MTR_5g058100 25.874 429 251 13 14 422 2 383 1.11e-22 99.4
MsG0480020403.01.T01 MTR_7g088260 26.941 438 243 17 9 423 79 462 1.59e-22 99.8
MsG0480020403.01.T01 MTR_6g022500 28.369 423 252 16 12 423 94 476 1.47e-21 97.1
MsG0480020403.01.T01 MTR_8g014210 31.799 239 105 6 235 423 1 231 1.51e-21 93.2
MsG0480020403.01.T01 MTR_5g073420 27.720 386 231 16 16 395 6 349 3.64e-21 95.1
MsG0480020403.01.T01 MTR_7g033990 25.178 421 233 13 21 415 11 375 6.00e-21 94.7
MsG0480020403.01.T01 MTR_7g115270 31.556 225 123 8 13 230 4 204 7.68e-21 94.4
MsG0480020403.01.T01 MTR_7g032370 26.884 398 237 15 33 423 2 352 2.55e-20 92.0
MsG0480020403.01.T01 MTR_4g024745 30.303 297 130 11 165 406 10 284 2.97e-20 90.9
MsG0480020403.01.T01 MTR_7g056447 34.146 205 108 7 21 225 9 186 3.69e-20 90.5
MsG0480020403.01.T01 MTR_5g008920 26.214 412 256 13 21 423 9 381 4.75e-20 91.7
MsG0480020403.01.T01 MTR_2g036470 26.545 437 252 16 12 422 2 395 1.32e-19 90.5
MsG0480020403.01.T01 MTR_6g045333 26.316 418 267 14 17 422 57 445 1.85e-19 90.5
MsG0480020403.01.T01 MTR_3g071850 26.877 413 261 16 15 415 18 401 3.31e-19 90.9
MsG0480020403.01.T01 MTR_7g034115 27.670 412 236 20 20 415 10 375 4.20e-19 89.0
MsG0480020403.01.T01 MTR_7g056277 27.570 428 225 18 21 422 259 627 4.27e-19 90.1
MsG0480020403.01.T01 MTR_4g098590 27.778 396 216 19 23 390 1 354 6.80e-19 88.2
MsG0480020403.01.T01 MTR_5g084070 25.427 468 240 16 7 415 2 419 1.92e-18 87.4
MsG0480020403.01.T01 MTR_3g036250 26.108 406 249 14 20 420 4 363 3.67e-18 85.9
MsG0480020403.01.T01 MTR_7g056287 27.488 422 233 17 21 422 3 371 5.07e-18 85.5
MsG0480020403.01.T01 MTR_5g008950 30.942 223 118 8 23 242 1 190 5.96e-18 85.5
MsG0480020403.01.T01 MTR_1g041245 33.333 219 116 9 20 237 10 199 6.18e-18 85.5
MsG0480020403.01.T01 MTR_1g041245 48.684 76 38 1 348 423 312 386 1.22e-11 66.2
MsG0480020403.01.T01 MTR_7g032380 32.701 211 111 8 21 228 11 193 6.81e-18 85.1
MsG0480020403.01.T01 MTR_7g032380 44.737 76 41 1 348 423 282 356 4.41e-11 64.3
MsG0480020403.01.T01 MTR_1g108820 26.147 436 236 18 16 420 3 383 8.71e-18 85.1
MsG0480020403.01.T01 MTR_7g055943 26.291 426 255 17 17 423 36 421 1.07e-17 85.1
MsG0480020403.01.T01 MTR_5g031970 26.988 415 231 14 12 421 7 354 1.25e-17 84.3
MsG0480020403.01.T01 MTR_8g085430 31.111 225 117 9 14 228 4 200 1.89e-17 83.6
MsG0480020403.01.T01 MTR_0009s0080 25.592 422 242 14 1 398 2 375 1.43e-16 81.6
MsG0480020403.01.T01 MTR_7g034110 26.446 363 189 13 19 374 9 300 2.33e-16 80.5
MsG0480020403.01.T01 MTR_5g080710 29.021 286 160 11 20 299 32 280 4.93e-16 80.1
MsG0480020403.01.T01 MTR_5g045510 25.814 430 219 18 20 420 11 369 5.68e-16 79.3
MsG0480020403.01.T01 MTR_8g014220 32.889 225 78 8 4 222 3 160 1.55e-15 74.3
MsG0480020403.01.T01 MTR_1g038710 31.878 229 134 8 21 247 19 227 5.39e-15 77.0
MsG0480020403.01.T01 MTR_3g107160 25.408 429 239 17 21 423 10 383 8.06e-15 76.3
MsG0480020403.01.T01 MTR_6g040270 27.830 424 225 23 23 420 10 378 8.50e-15 75.9
MsG0480020403.01.T01 MTR_2g007500 29.439 214 113 6 17 228 10 187 1.65e-14 74.7
MsG0480020403.01.T01 MTR_4g134150 31.356 236 110 10 21 246 14 207 1.75e-14 73.2
MsG0480020403.01.T01 MTR_8g014230 44.444 81 43 2 333 413 17 95 2.27e-14 69.3
MsG0480020403.01.T01 MTR_7g056430 34.228 149 79 5 21 168 9 139 4.75e-14 75.1
MsG0480020403.01.T01 MTR_7g056420 34.228 149 79 5 21 168 9 139 5.30e-14 74.7
MsG0480020403.01.T01 MTR_4g056040 30.705 241 120 10 21 234 9 229 8.62e-14 73.6
MsG0480020403.01.T01 MTR_6g022390 32.800 125 80 3 21 143 5 127 1.06e-13 68.9
MsG0480020403.01.T01 MTR_4g113810 36.986 146 74 4 107 248 2 133 1.11e-13 69.3
MsG0480020403.01.T01 MTR_4g039440 26.281 449 257 19 2 423 11 412 1.32e-13 72.4
MsG0480020403.01.T01 MTR_3g107100 29.384 211 121 7 21 229 11 195 1.89e-13 72.0
MsG0480020403.01.T01 MTR_5g061680 31.963 219 122 10 13 229 3 196 4.40e-13 70.5
MsG0480020403.01.T01 MTR_7g033945 31.892 185 98 8 19 194 9 174 4.76e-13 67.8
MsG0480020403.01.T01 MTR_7g114710 30.986 213 112 10 21 228 13 195 4.98e-13 70.5
MsG0480020403.01.T01 MTR_2g008320 24.829 439 247 18 13 423 44 427 5.86e-13 70.9
MsG0480020403.01.T01 MTR_2g008310 24.658 438 227 17 21 423 2 371 1.00e-12 69.7
MsG0480020403.01.T01 MTR_1g108820 30.332 211 118 8 16 226 3 184 1.47e-12 68.9
MsG0480020403.01.T01 MTR_2g007450 30.472 233 129 8 8 226 3 216 1.81e-12 68.9
MsG0480020403.01.T01 MTR_4g024770 50.746 67 29 2 4 70 10 72 1.97e-12 62.8
MsG0480020403.01.T01 MTR_7g033940 33.577 137 75 5 23 157 96 218 1.98e-12 66.6
MsG0480020403.01.T01 MTR_3g023330 30.864 162 93 5 8 168 2 145 1.47e-11 65.9
MsG0480020403.01.T01 MTR_5g058000 28.837 215 123 7 16 228 3 189 1.64e-11 65.9
MsG0480020403.01.T01 MTR_5g045170 30.189 212 116 9 23 230 16 199 1.66e-11 65.9
MsG0480020403.01.T01 MTR_3g115430 42.667 75 40 1 349 423 54 125 2.61e-11 61.2
MsG0480020403.01.T01 MTR_3g107120 25.571 438 238 18 21 424 9 392 4.54e-11 64.7
MsG0480020403.01.T01 MTR_7g021630 25.387 323 180 11 9 315 5 282 4.77e-11 64.3
MsG0480020403.01.T01 MTR_6g044560 23.423 444 256 17 14 423 171 564 4.94e-11 65.1
MsG0480020403.01.T01 MTR_8g066650 30.256 195 111 6 8 201 67 237 6.15e-11 64.3
MsG0480020403.01.T01 MTR_7g021630 25.387 323 180 11 9 315 5 282 6.16e-11 63.9
MsG0480020403.01.T01 MTR_6g044572 24.027 437 248 17 21 423 2 388 6.55e-11 64.3
MsG0480020403.01.T01 MTR_5g083890 26.764 411 248 14 21 405 6 389 7.62e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480020403.01.T01 AT4G10400 28.767 438 245 17 21 422 2 408 2.21e-24 104
MsG0480020403.01.T01 AT4G10400 28.767 438 245 17 21 422 2 408 2.21e-24 104
MsG0480020403.01.T01 AT4G10400 28.767 438 245 17 21 422 2 408 2.21e-24 104
MsG0480020403.01.T01 AT1G32375 26.898 461 239 20 21 423 2 422 7.44e-24 103
MsG0480020403.01.T01 AT1G32375 26.898 461 239 20 21 423 2 422 7.44e-24 103
MsG0480020403.01.T01 AT5G56420 27.578 446 251 14 21 423 6 422 6.77e-23 100
MsG0480020403.01.T01 AT5G56420 27.578 446 251 14 21 423 6 422 6.77e-23 100
MsG0480020403.01.T01 AT5G56420 27.578 446 251 14 21 423 6 422 6.77e-23 100
MsG0480020403.01.T01 AT5G18780 29.167 456 247 19 17 420 7 438 1.63e-20 93.6
MsG0480020403.01.T01 AT5G18780 29.167 456 247 19 17 420 7 438 1.63e-20 93.6
MsG0480020403.01.T01 AT3G59200 32.857 210 114 8 21 226 7 193 4.21e-20 91.7
MsG0480020403.01.T01 AT3G59200 32.857 210 114 8 21 226 7 193 1.94e-19 90.9
MsG0480020403.01.T01 AT4G26340 27.632 456 239 18 21 423 2 419 6.52e-19 88.6
MsG0480020403.01.T01 AT1G16930 30.804 224 123 8 11 233 8 200 8.44e-19 88.6
MsG0480020403.01.T01 AT1G16930 30.804 224 123 8 11 233 8 200 8.44e-19 88.6
MsG0480020403.01.T01 AT1G16930 30.804 224 123 8 11 233 8 200 8.44e-19 88.6
MsG0480020403.01.T01 AT1G69630 31.050 219 125 7 9 226 5 198 1.05e-17 85.5
MsG0480020403.01.T01 AT5G18780 29.000 400 216 16 17 385 7 369 1.38e-17 84.3
MsG0480020403.01.T01 AT5G18780 29.000 400 216 16 17 385 7 369 1.38e-17 84.3
MsG0480020403.01.T01 AT4G09920 32.039 206 115 7 21 226 2 182 1.50e-17 83.2
MsG0480020403.01.T01 AT4G09920 32.039 206 115 7 21 226 2 182 1.50e-17 83.2
MsG0480020403.01.T01 AT4G09920 32.039 206 115 7 21 226 2 182 1.50e-17 83.2
MsG0480020403.01.T01 AT4G09920 32.039 206 115 7 21 226 2 182 1.52e-17 83.6
MsG0480020403.01.T01 AT4G09920 32.039 206 115 7 21 226 2 182 1.52e-17 83.6
MsG0480020403.01.T01 AT3G42770 31.776 214 123 7 23 232 1 195 3.78e-17 84.0
MsG0480020403.01.T01 AT4G26350 26.490 453 257 20 21 423 2 428 6.50e-17 82.8
MsG0480020403.01.T01 AT3G60040 29.787 235 143 8 21 247 13 233 1.66e-16 82.4
MsG0480020403.01.T01 AT3G60040 29.787 235 143 8 21 247 233 453 2.60e-16 82.0
MsG0480020403.01.T01 AT3G60040 29.787 235 143 8 21 247 232 452 2.67e-16 82.0
MsG0480020403.01.T01 AT3G60040 29.787 235 143 8 21 247 230 450 2.68e-16 81.6
MsG0480020403.01.T01 AT3G60040 29.787 235 143 8 21 247 232 452 2.79e-16 81.6
MsG0480020403.01.T01 AT5G53840 25.647 464 257 21 15 424 12 441 4.53e-16 80.5
MsG0480020403.01.T01 AT2G26860 30.213 235 133 6 21 249 2 211 9.53e-16 79.0
MsG0480020403.01.T01 AT2G26860 30.213 235 133 6 21 249 2 211 9.53e-16 79.0
MsG0480020403.01.T01 AT5G56440 26.797 459 248 15 21 422 2 429 3.66e-15 77.4
MsG0480020403.01.T01 AT4G14103 30.100 299 155 14 17 299 4 264 5.85e-15 77.0
MsG0480020403.01.T01 AT3G26922 27.869 244 135 10 16 251 9 219 5.95e-15 75.9
MsG0480020403.01.T01 AT3G26922 27.869 244 135 10 16 251 9 219 5.95e-15 75.9
MsG0480020403.01.T01 AT4G14103 30.201 298 154 14 18 299 5 264 8.90e-15 75.9
MsG0480020403.01.T01 AT4G14103 30.201 298 154 14 18 299 5 264 8.90e-15 75.9
MsG0480020403.01.T01 AT5G41840 28.627 255 136 13 17 249 10 240 4.71e-14 74.3
MsG0480020403.01.T01 AT3G59230 30.876 217 126 7 16 226 7 205 5.82e-14 73.9
MsG0480020403.01.T01 AT5G38590 26.591 440 231 19 21 408 2 401 2.82e-13 71.6
MsG0480020403.01.T01 AT3G59190 30.159 189 116 6 5 191 1 175 2.84e-13 72.0
MsG0480020403.01.T01 AT3G59190 30.159 189 116 6 5 191 1 175 3.41e-13 71.2
MsG0480020403.01.T01 AT5G38396 28.571 245 145 9 21 255 2 226 8.65e-13 70.5
MsG0480020403.01.T01 AT3G59240 28.326 233 138 9 21 247 8 217 2.20e-12 69.3
MsG0480020403.01.T01 AT5G22720 26.872 227 137 7 15 240 17 215 2.38e-12 68.9
MsG0480020403.01.T01 AT5G50270 24.706 425 233 16 21 390 2 394 3.76e-12 68.2
MsG0480020403.01.T01 AT3G50710 23.758 463 256 20 21 423 2 427 3.94e-12 68.2
MsG0480020403.01.T01 AT4G00160 27.234 470 242 21 19 425 14 446 4.86e-12 67.8
MsG0480020403.01.T01 AT3G52680 27.766 461 249 19 19 425 19 449 4.89e-12 67.8
MsG0480020403.01.T01 AT5G38590 29.655 290 153 14 21 298 2 252 5.48e-12 66.6
MsG0480020403.01.T01 AT5G60610 24.582 419 227 13 21 387 2 383 5.69e-12 67.4
MsG0480020403.01.T01 AT5G60610 24.582 419 227 13 21 387 2 383 5.69e-12 67.4
MsG0480020403.01.T01 AT5G56370 23.377 462 251 17 21 422 2 420 1.13e-11 66.6
MsG0480020403.01.T01 AT5G56370 23.377 462 251 17 21 422 2 420 1.13e-11 66.6
MsG0480020403.01.T01 AT4G27050 26.818 220 127 7 20 226 3 201 1.32e-11 66.6
MsG0480020403.01.T01 AT4G27050 26.818 220 127 7 20 226 3 201 1.32e-11 66.6
MsG0480020403.01.T01 AT4G27050 26.818 220 127 7 20 226 3 201 1.32e-11 66.6
MsG0480020403.01.T01 AT4G27050 26.818 220 127 7 20 226 3 201 1.32e-11 66.6
MsG0480020403.01.T01 AT4G27050 26.818 220 127 7 20 226 3 201 1.32e-11 66.6
MsG0480020403.01.T01 AT4G00320 28.111 217 130 8 18 226 10 208 1.69e-11 66.2
MsG0480020403.01.T01 AT1G05080 30.516 213 115 8 18 226 10 193 1.83e-11 66.2
MsG0480020403.01.T01 AT1G60400 28.692 237 139 8 17 250 10 219 4.96e-11 64.7
MsG0480020403.01.T01 AT1G55030 30.180 222 120 11 8 226 5 194 6.53e-11 64.3
MsG0480020403.01.T01 AT2G29930 26.939 245 132 11 18 251 9 217 7.17e-11 64.3
MsG0480020403.01.T01 AT2G29930 26.939 245 132 11 18 251 9 217 7.17e-11 64.3

Find 132 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATACTACAGTCTTAT+CGG 0.259684 4:+40653504 MsG0480020403.01.T01:intron
AGGTTGGATTCGAGACATTT+AGG 0.278823 4:-40654391 None:intergenic
TTCTTCTTTCTGTCGTTTAG+AGG 0.291387 4:-40652918 None:intergenic
GTAAATCATGGTTTCTCTTT+CGG 0.306227 4:-40653962 None:intergenic
ATCCTCCGCAATTCTCTGTT+AGG 0.336048 4:-40653127 None:intergenic
GATTCAACTGTGTCTCCTTA+AGG 0.351050 4:+40654610 MsG0480020403.01.T01:CDS
ATGTGGCTCCGTGCTGCTAT+TGG 0.357203 4:+40653274 MsG0480020403.01.T01:CDS
TCATTACTTGCATTTCTCTC+TGG 0.365677 4:+40653651 MsG0480020403.01.T01:CDS
ATACTCTTGTAATTTGTTGT+TGG 0.365776 4:+40657530 MsG0480020403.01.T01:three_prime_UTR
GTGGCTATGGAGGTTCTTGT+TGG 0.367455 4:-40653016 None:intergenic
GGGAACTTTGGTCAAGAATC+CGG 0.385772 4:-40653712 None:intergenic
TGAATGTAGCTAATCATGTT+TGG 0.401518 4:+40657314 MsG0480020403.01.T01:three_prime_UTR
ATGTGGCATAAGATTGGTTC+TGG 0.406518 4:-40652980 None:intergenic
CTGACATATGTTCACATAGA+AGG 0.408606 4:+40654412 MsG0480020403.01.T01:CDS
TTCCTCTCGTCTCTCGCCGC+TGG 0.410820 4:+40653041 MsG0480020403.01.T01:CDS
ATGTCAAGTTCAACGATGCC+TGG 0.412115 4:-40653594 None:intergenic
GGCAGAGCCCCTTGGTATAT+CGG 0.416227 4:-40654569 None:intergenic
CTGGAGACTGTGTTGATATG+TGG 0.419103 4:+40653257 MsG0480020403.01.T01:CDS
GGGCTTCATTAAGATGTCAT+TGG 0.420044 4:+40657350 MsG0480020403.01.T01:three_prime_UTR
GACGAGAGGAAGGGTGGCTA+TGG 0.428174 4:-40653029 None:intergenic
GTCAGTGAATTGCAACCTCT+TGG 0.432059 4:-40653748 None:intergenic
GTACCAATCTTGTTTCTCTC+AGG 0.432210 4:+40653380 MsG0480020403.01.T01:CDS
AAAAGACCAGCTAGCCGTAT+TGG 0.434042 4:-40657490 None:intergenic
CATGGTTTCTCTTTCGGAGG+AGG 0.435109 4:-40653956 None:intergenic
GGAAGGTGGCACGGGAACTT+TGG 0.436620 4:-40653724 None:intergenic
AGCGGCGAGAGACGAGAGGA+AGG 0.441640 4:-40653039 None:intergenic
TTTGGCTCCCATGTTTCTAA+AGG 0.442813 4:-40654355 None:intergenic
CTCGCCGCTGGAACAACCTC+TGG 0.443497 4:+40653053 MsG0480020403.01.T01:CDS
TGGCTATGGAGGTTCTTGTT+GGG 0.444574 4:-40653015 None:intergenic
GTTCTGGTAGAGTGCTTAAT+CGG 0.445026 4:-40652964 None:intergenic
GTACAATCGAAGAATGAATT+CGG 0.445873 4:-40653361 None:intergenic
TCACTGACAGGAAATTCTCT+TGG 0.450899 4:+40653763 MsG0480020403.01.T01:CDS
TTAGGAACTATTGTTGACTT+TGG 0.451352 4:-40654373 None:intergenic
AAGAATGTTGAATCATCATA+TGG 0.462391 4:-40653533 None:intergenic
AATGTTTGGCAGTGCGCACT+TGG 0.466618 4:+40657277 MsG0480020403.01.T01:intron
TTCTCTGTTAGGGTTGGAAT+CGG 0.468363 4:-40653116 None:intergenic
AAAGCCACGTTGGGCATCAT+TGG 0.474788 4:+40653855 MsG0480020403.01.T01:CDS
TTCTTGTTGGGAGGAAGGAG+AGG 0.476181 4:-40653003 None:intergenic
ATGTTTGGTCAGATATGCTC+GGG 0.481361 4:+40657329 MsG0480020403.01.T01:three_prime_UTR
GAGAGGATGTGGCATAAGAT+TGG 0.483354 4:-40652986 None:intergenic
TCCTCCGCAATTCTCTGTTA+GGG 0.484539 4:-40653126 None:intergenic
GCCTTGAAATAGATTCCGAT+TGG 0.485787 4:+40653790 MsG0480020403.01.T01:CDS
CCGCAATTCTCTGTTAGGGT+TGG 0.487905 4:-40653122 None:intergenic
CTCTTGGAGGAAGGTGGCAC+GGG 0.496228 4:-40653732 None:intergenic
GATGTAAAGGACGGTGGTAG+TGG 0.497631 4:+40653816 MsG0480020403.01.T01:CDS
AGCATCACAAAAGCCACGTT+GGG 0.499156 4:+40653846 MsG0480020403.01.T01:CDS
TCCAATCGGAATCTATTTCA+AGG 0.501508 4:-40653791 None:intergenic
ATCAAGACATGGTACACAAA+AGG 0.501719 4:+40657447 MsG0480020403.01.T01:three_prime_UTR
CTTCTATGTGAACATATGTC+AGG 0.503868 4:-40654411 None:intergenic
GGAGGTTCTTGTTGGGAGGA+AGG 0.503902 4:-40653008 None:intergenic
GTTGGAATCGGAGTCGGTGT+TGG 0.507797 4:-40653104 None:intergenic
GAAGAAGAAAACAACGGCGG+AGG 0.512346 4:+40652935 MsG0480020403.01.T01:CDS
TTCGGAGGAGGCTGAGCATA+GGG 0.513211 4:-40653944 None:intergenic
GACAAATTCACTTTCACGCA+TGG 0.514259 4:-40653919 None:intergenic
GTTCACATAGAAGGATATCA+AGG 0.515530 4:+40654421 MsG0480020403.01.T01:CDS
TTATGACCAATACGGCTAGC+TGG 0.518103 4:+40657484 MsG0480020403.01.T01:three_prime_UTR
AAGTACAAGTTGAGCTCCAC+GGG 0.520114 4:-40653335 None:intergenic
GTATCCAGAGTTTCGAGTAC+GGG 0.523173 4:-40653678 None:intergenic
TTCCGATTGGATCGATGTAA+AGG 0.524026 4:+40653803 MsG0480020403.01.T01:CDS
TCCCATGTTTCTAAAGGTGA+CGG 0.535747 4:-40654349 None:intergenic
TTTCGGAGGAGGCTGAGCAT+AGG 0.535888 4:-40653945 None:intergenic
CTATGGAGGTTCTTGTTGGG+AGG 0.536477 4:-40653012 None:intergenic
GCAAAAGTAGATGTAAATCA+TGG 0.538053 4:-40653974 None:intergenic
AACCGTCACCTTTAGAAACA+TGG 0.541818 4:+40654347 MsG0480020403.01.T01:CDS
CCTCTTGGAGGAAGGTGGCA+CGG 0.543245 4:-40653733 None:intergenic
GAGCGAAAGTACGATGGCGC+TGG 0.544061 4:+40652889 MsG0480020403.01.T01:exon
GAGAGACAGTTCTTCAAGGT+GGG 0.545132 4:-40653299 None:intergenic
CATGTTTGGTCAGATATGCT+CGG 0.545226 4:+40657328 MsG0480020403.01.T01:three_prime_UTR
TTAATTAGTTATGACCAATA+CGG 0.547189 4:+40657476 MsG0480020403.01.T01:three_prime_UTR
AATCATGGTTTCTCTTTCGG+AGG 0.548045 4:-40653959 None:intergenic
GAGAGGAAGGGTGGCTATGG+AGG 0.548439 4:-40653026 None:intergenic
AGAGGTTGCAATTCACTGAC+AGG 0.551444 4:+40653751 MsG0480020403.01.T01:CDS
GGAACTTTGGTCAAGAATCC+GGG 0.551658 4:-40653711 None:intergenic
TGACATGTGGCAGAGCCCCT+TGG 0.552309 4:-40654577 None:intergenic
TATCGAGAGACAGTTCTTCA+AGG 0.553980 4:-40653303 None:intergenic
GTCCTTTACATCGATCCAAT+CGG 0.554267 4:-40653805 None:intergenic
AGTATCCAGAGTTTCGAGTA+CGG 0.555745 4:-40653679 None:intergenic
TTGGGAGGAAGGAGAGGATG+TGG 0.557034 4:-40652997 None:intergenic
AGATATATTCAGCAAATGCC+AGG 0.557539 4:-40654456 None:intergenic
TGGTAGAGTGCTTAATCGGT+CGG 0.558863 4:-40652960 None:intergenic
TCAAGGATTCGAAGAGGACC+TGG 0.560349 4:+40654438 MsG0480020403.01.T01:CDS
ATGAAACTTTCTAATCTCGC+GGG 0.562383 4:-40653200 None:intergenic
TTTGCGTCATTCGACATCAA+AGG 0.568262 4:+40653992 MsG0480020403.01.T01:CDS
AAGGACGGTGGTAGTGGTAG+CGG 0.568585 4:+40653822 MsG0480020403.01.T01:CDS
GTTAGGGTTGGAATCGGAGT+CGG 0.569177 4:-40653110 None:intergenic
ATCAAATTTAAGTTGACATG+TGG 0.569929 4:-40654590 None:intergenic
CATTGGCAACTTGCAGAGTG+TGG 0.573512 4:+40653872 MsG0480020403.01.T01:CDS
GCTGAATATATCTTGTGTAA+CGG 0.574991 4:+40654466 MsG0480020403.01.T01:CDS
GAAGTACAAGTTGAGCTCCA+CGG 0.575981 4:-40653336 None:intergenic
TTGCCCCGTACTCGAAACTC+TGG 0.576045 4:+40653674 MsG0480020403.01.T01:CDS
GCGGCGAGAGACGAGAGGAA+GGG 0.577889 4:-40653038 None:intergenic
TGTCAAGTTCAACGATGCCT+GGG 0.582114 4:-40653593 None:intergenic
TATGTGAACATATGTCAGGT+TGG 0.587643 4:-40654407 None:intergenic
GACGTTGTACAACTTGAGGC+AGG 0.588742 4:+40653618 MsG0480020403.01.T01:CDS
CTCGATATTGATAACTCCCG+TGG 0.588814 4:+40653319 MsG0480020403.01.T01:CDS
GCGAGAGACGAGAGGAAGGG+TGG 0.589250 4:-40653035 None:intergenic
ACAACTTGAGGCAGGCATTG+TGG 0.593003 4:+40653626 MsG0480020403.01.T01:CDS
AATTGCAACCTCTTGGAGGA+AGG 0.593329 4:-40653741 None:intergenic
TTACCTGAGAGAAACAAGAT+TGG 0.595841 4:-40653383 None:intergenic
AGTGAATTGCAACCTCTTGG+AGG 0.596150 4:-40653745 None:intergenic
CCGTGCCACCTTCCTCCAAG+AGG 0.596533 4:+40653733 MsG0480020403.01.T01:CDS
AAAGATTAACCGATATACCA+AGG 0.607874 4:+40654560 MsG0480020403.01.T01:CDS
AAGATTAACCGATATACCAA+GGG 0.609206 4:+40654561 MsG0480020403.01.T01:CDS
ACCGTCACCTTTAGAAACAT+GGG 0.609424 4:+40654348 MsG0480020403.01.T01:CDS
CGAGAGACAGTTCTTCAAGG+TGG 0.611356 4:-40653300 None:intergenic
GGTGTTGGAGTCGAAGTGGA+AGG 0.612383 4:-40653089 None:intergenic
AGAGACAGTTCTTCAAGGTG+GGG 0.613163 4:-40653298 None:intergenic
TTAGCTACATTCATAAATCA+CGG 0.613791 4:-40657304 None:intergenic
CATAGACGTTGTACAACTTG+AGG 0.614019 4:+40653614 MsG0480020403.01.T01:CDS
GCTTCCAGAGGTTGTTCCAG+CGG 0.622371 4:-40653057 None:intergenic
TAGCATCACAAAAGCCACGT+TGG 0.623602 4:+40653845 MsG0480020403.01.T01:CDS
GAAATTGAGCGAAAGTACGA+TGG 0.624926 4:+40652883 MsG0480020403.01.T01:exon
GATGAAACTTTCTAATCTCG+CGG 0.625678 4:-40653201 None:intergenic
TGCAACCTCTTGGAGGAAGG+TGG 0.627014 4:-40653738 None:intergenic
TTCCAGCGGCGAGAGACGAG+AGG 0.631320 4:-40653043 None:intergenic
AGTCGGTGTTGGAGTCGAAG+TGG 0.632064 4:-40653093 None:intergenic
TATCCAGAGTTTCGAGTACG+GGG 0.646023 4:-40653677 None:intergenic
AGGATATCAAGGATTCGAAG+AGG 0.657505 4:+40654432 MsG0480020403.01.T01:CDS
TGGCAACTTGCAGAGTGTGG+AGG 0.661078 4:+40653875 MsG0480020403.01.T01:CDS
CAGAAAGAAGAAGAAAACAA+CGG 0.666457 4:+40652929 MsG0480020403.01.T01:CDS
ACCCTAACAGAGAATTGCGG+AGG 0.672559 4:+40653125 MsG0480020403.01.T01:CDS
AAAGAAGAAGAAAACAACGG+CGG 0.677014 4:+40652932 MsG0480020403.01.T01:CDS
GATTGGCAAATATCAAGACA+TGG 0.680758 4:+40657436 MsG0480020403.01.T01:three_prime_UTR
GATTGGATCGATGTAAAGGA+CGG 0.690784 4:+40653807 MsG0480020403.01.T01:CDS
AAGATGTTGAAAATCGACCC+AGG 0.694117 4:+40653576 MsG0480020403.01.T01:CDS
GGTGGGGTCCAATAGCAGCA+CGG 0.694370 4:-40653282 None:intergenic
AGGCGTCGAGATGCTTCCAG+AGG 0.695614 4:-40653069 None:intergenic
TGTTTGGTCAGATATGCTCG+GGG 0.695829 4:+40657330 MsG0480020403.01.T01:three_prime_UTR
TGGATCGATGTAAAGGACGG+TGG 0.710326 4:+40653810 MsG0480020403.01.T01:CDS
CCAACCCTAACAGAGAATTG+CGG 0.734741 4:+40653122 MsG0480020403.01.T01:CDS
AGATTAACCGATATACCAAG+GGG 0.738387 4:+40654562 MsG0480020403.01.T01:CDS
GTTGCCAATGATGCCCAACG+TGG 0.746675 4:-40653859 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATAAAGATTTGATAAT+TGG - Chr4:40655226-40655245 None:intergenic 10.0%
!!! TATCAAATCTTTATTTATTT+AGG + Chr4:40655228-40655247 MsG0480020403.01.T01:intron 10.0%
!! AAAATTTACCAATATTAAGT+CGG - Chr4:40657157-40657176 None:intergenic 15.0%
!! AAATTCTGGATAATTTAAAA+TGG - Chr4:40654120-40654139 None:intergenic 15.0%
!! TTGTCTCAAATTATTATAAA+AGG + Chr4:40657081-40657100 MsG0480020403.01.T01:intron 15.0%
!!! ATAAAATAGTCTGTTTTTAT+TGG + Chr4:40656217-40656236 MsG0480020403.01.T01:intron 15.0%
!!! TAATTTATACTTCTCTTTTA+AGG - Chr4:40655550-40655569 None:intergenic 15.0%
!!! TATATTTTTTGATACTTCAA+TGG + Chr4:40654510-40654529 MsG0480020403.01.T01:CDS 15.0%
!! AAGGTGAGATATTATTATTA+TGG + Chr4:40654011-40654030 MsG0480020403.01.T01:intron 20.0%
!! ACATTAATTGAATATAGACA+AGG - Chr4:40655834-40655853 None:intergenic 20.0%
!! ATAAACTTTCAAAGTTGAAA+CGG - Chr4:40655990-40656009 None:intergenic 20.0%
!! GAAAGTAACTAAAAAATAAC+AGG - Chr4:40656924-40656943 None:intergenic 20.0%
!! GTAAAACTTTATTATGTCTA+TGG + Chr4:40657120-40657139 MsG0480020403.01.T01:intron 20.0%
!! TAACAAGATCAAATAAAAAG+TGG - Chr4:40654988-40655007 None:intergenic 20.0%
!! TGTGATTATACTATTATAGA+AGG + Chr4:40655461-40655480 MsG0480020403.01.T01:intron 20.0%
!! TTAATTAGTTATGACCAATA+CGG + Chr4:40657476-40657495 MsG0480020403.01.T01:three_prime_UTR 20.0%
!!! AAAATGTTTTCTCTGATTTT+AGG - Chr4:40655361-40655380 None:intergenic 20.0%
!!! CATCGTTATTTTTTTTTTAG+AGG + Chr4:40657562-40657581 MsG0480020403.01.T01:three_prime_UTR 20.0%
!!! GGTGTTTTATCAATATATTT+GGG + Chr4:40657010-40657029 MsG0480020403.01.T01:intron 20.0%
!!! GTGTGAAAATAATTTTGAAA+GGG + Chr4:40656175-40656194 MsG0480020403.01.T01:intron 20.0%
!!! TAATCTAATTTGTGTTTGTT+AGG + Chr4:40655568-40655587 MsG0480020403.01.T01:intron 20.0%
!!! TATTTTATCTGTTTTTGCTT+TGG - Chr4:40656205-40656224 None:intergenic 20.0%
!!! TGGTGTTTTATCAATATATT+TGG + Chr4:40657009-40657028 MsG0480020403.01.T01:intron 20.0%
!!! TGTGAAAATAATTTTGAAAG+GGG + Chr4:40656176-40656195 MsG0480020403.01.T01:intron 20.0%
!!! TGTGTGAAAATAATTTTGAA+AGG + Chr4:40656174-40656193 MsG0480020403.01.T01:intron 20.0%
! AAACTCATGAACATAAAAAG+TGG - Chr4:40655412-40655431 None:intergenic 25.0%
! AAGAATGTTGAATCATCATA+TGG - Chr4:40653536-40653555 None:intergenic 25.0%
! AGCAAATAAACTAGTCATAA+TGG - Chr4:40656808-40656827 None:intergenic 25.0%
! CATTTCTGTGTATATCAAAA+GGG - Chr4:40655612-40655631 None:intergenic 25.0%
! CTTCTTACAAAATTGAGTTT+AGG - Chr4:40656143-40656162 None:intergenic 25.0%
! GAATTAATGATGATCAAGAT+TGG + Chr4:40654670-40654689 MsG0480020403.01.T01:intron 25.0%
! TCTCATTGTAATACCTAATT+GGG + Chr4:40655011-40655030 MsG0480020403.01.T01:intron 25.0%
! TGAAGTGGTGAATAATATTA+AGG + Chr4:40656403-40656422 MsG0480020403.01.T01:intron 25.0%
! TGATTTAAATTGCGAAATTC+TGG - Chr4:40654134-40654153 None:intergenic 25.0%
! TTAGCTACATTCATAAATCA+CGG - Chr4:40657307-40657326 None:intergenic 25.0%
! TTCTCATTGTAATACCTAAT+TGG + Chr4:40655010-40655029 MsG0480020403.01.T01:intron 25.0%
!! ATTTACATCACCTTTTACAA+TGG + Chr4:40655273-40655292 MsG0480020403.01.T01:intron 25.0%
!! CTGTAGTATTTTCAAAAGAT+AGG - Chr4:40653498-40653517 None:intergenic 25.0%
!! GTTTCAACTTTGAAAGTTTA+TGG + Chr4:40655989-40656008 MsG0480020403.01.T01:intron 25.0%
!! TATGTTTTACGAATGGTTTT+GGG + Chr4:40656472-40656491 MsG0480020403.01.T01:intron 25.0%
!! TCTGATGTTTATAAGTTTTC+TGG + Chr4:40653238-40653257 MsG0480020403.01.T01:CDS 25.0%
!! TCTTTATTTATTTAGGCCAT+TGG + Chr4:40655235-40655254 MsG0480020403.01.T01:intron 25.0%
!! TGAAAATACTACAGTCTTAT+CGG + Chr4:40653504-40653523 MsG0480020403.01.T01:intron 25.0%
!! TTCATTTCATTTGCTACTTA+CGG + Chr4:40656273-40656292 MsG0480020403.01.T01:intron 25.0%
!! TTCTGGATAATTTAAAATGG+AGG - Chr4:40654117-40654136 None:intergenic 25.0%
!!! AACTTGTTTGTTTTTGTGAT+TGG + Chr4:40657419-40657438 MsG0480020403.01.T01:three_prime_UTR 25.0%
!!! AACTTTTTCTGCTAAATGTT+TGG + Chr4:40657263-40657282 MsG0480020403.01.T01:intron 25.0%
!!! AGTATAGTGCTTTTTTGATT+GGG + Chr4:40656692-40656711 MsG0480020403.01.T01:intron 25.0%
!!! ATACTCTTGTAATTTGTTGT+TGG + Chr4:40657530-40657549 MsG0480020403.01.T01:three_prime_UTR 25.0%
!!! ATCAAATTTAAGTTGACATG+TGG - Chr4:40654593-40654612 None:intergenic 25.0%
!!! ATGCTTTTAGTTCATTGATA+TGG + Chr4:40656047-40656066 MsG0480020403.01.T01:intron 25.0%
!!! ATTTTGATCTTTCTATCAAC+AGG - Chr4:40655677-40655696 None:intergenic 25.0%
!!! CTAATTTTGGTGGAAATTAT+AGG - Chr4:40654863-40654882 None:intergenic 25.0%
!!! CTTGTTGGTAGTAATTTTTT+GGG + Chr4:40657232-40657251 MsG0480020403.01.T01:intron 25.0%
!!! GTAATTTGTTGTTGGTTTTT+AGG + Chr4:40657538-40657557 MsG0480020403.01.T01:three_prime_UTR 25.0%
!!! GTTTTTCCTTCAATTTTAGT+AGG - Chr4:40655155-40655174 None:intergenic 25.0%
!!! TCTTGTTGGTAGTAATTTTT+TGG + Chr4:40657231-40657250 MsG0480020403.01.T01:intron 25.0%
AAACCTTGCAACTTTGAATT+AGG - Chr4:40654235-40654254 None:intergenic 30.0%
AAAGATTAACCGATATACCA+AGG + Chr4:40654560-40654579 MsG0480020403.01.T01:CDS 30.0%
AAATAAAAAGTGGACACTTG+AGG - Chr4:40654978-40654997 None:intergenic 30.0%
AACAAGTTGTCCATTGTAAA+AGG - Chr4:40655286-40655305 None:intergenic 30.0%
AACCATTCGTAAAACATACA+TGG - Chr4:40656470-40656489 None:intergenic 30.0%
AAGATTAACCGATATACCAA+GGG + Chr4:40654561-40654580 MsG0480020403.01.T01:CDS 30.0%
AATAAAAAGTGGACACTTGA+GGG - Chr4:40654977-40654996 None:intergenic 30.0%
ACATTATATCAGCATGGTTT+AGG + Chr4:40657183-40657202 MsG0480020403.01.T01:intron 30.0%
ACCATATTTAACACAATTCG+TGG + Chr4:40654931-40654950 MsG0480020403.01.T01:intron 30.0%
AGGTGATGTAAATTCATCAA+AGG - Chr4:40655266-40655285 None:intergenic 30.0%
ATAATATTAAGGAGCTGTCT+TGG + Chr4:40656414-40656433 MsG0480020403.01.T01:intron 30.0%
ATGTTGAGATTCTCTTTGTT+AGG + Chr4:40656878-40656897 MsG0480020403.01.T01:intron 30.0%
ATTATTCACCACTTCATCAA+CGG - Chr4:40656399-40656418 None:intergenic 30.0%
CAACTTTCTATAACTTCGAA+AGG - Chr4:40654781-40654800 None:intergenic 30.0%
CACAAAAACAAACAAGTTTC+TGG - Chr4:40657417-40657436 None:intergenic 30.0%
CAGAAAGAAGAAGAAAACAA+CGG + Chr4:40652929-40652948 MsG0480020403.01.T01:CDS 30.0%
CATGGTTTGAATGATTATGA+GGG + Chr4:40656776-40656795 MsG0480020403.01.T01:intron 30.0%
CTATAACTTCGAAAGGTTAT+TGG - Chr4:40654774-40654793 None:intergenic 30.0%
CTTCAACCTAATAAATCTTG+CGG - Chr4:40655115-40655134 None:intergenic 30.0%
GAGATCTTGTTGAAATTTCT+TGG + Chr4:40655646-40655665 MsG0480020403.01.T01:intron 30.0%
GCAAAAGTAGATGTAAATCA+TGG - Chr4:40653977-40653996 None:intergenic 30.0%
GCATTTCTGTGTATATCAAA+AGG - Chr4:40655613-40655632 None:intergenic 30.0%
GCTGAATATATCTTGTGTAA+CGG + Chr4:40654466-40654485 MsG0480020403.01.T01:CDS 30.0%
GGTGATGTAAATTCATCAAA+GGG - Chr4:40655265-40655284 None:intergenic 30.0%
GTAAATCATGGTTTCTCTTT+CGG - Chr4:40653965-40653984 None:intergenic 30.0%
GTACAATCGAAGAATGAATT+CGG - Chr4:40653364-40653383 None:intergenic 30.0%
TACAATTATTGGCACAATTC+TGG + Chr4:40656967-40656986 MsG0480020403.01.T01:intron 30.0%
TACGCAAAATTAGCAAGAAT+TGG - Chr4:40655866-40655885 None:intergenic 30.0%
TGAATGTAGCTAATCATGTT+TGG + Chr4:40657314-40657333 MsG0480020403.01.T01:three_prime_UTR 30.0%
TGAATTTCGTGGCATTTATT+AGG + Chr4:40655178-40655197 MsG0480020403.01.T01:intron 30.0%
TGCACAATAAGATATGTTTC+AGG + Chr4:40654701-40654720 MsG0480020403.01.T01:intron 30.0%
TGTATCACATTATATCAGCA+TGG + Chr4:40657177-40657196 MsG0480020403.01.T01:intron 30.0%
TGTCTATGTACCTTATAAGT+TGG + Chr4:40656104-40656123 MsG0480020403.01.T01:intron 30.0%
TTACTACCAACAAGACTAAA+AGG - Chr4:40657226-40657245 None:intergenic 30.0%
TTGTAATACCTAATTGGGAT+TGG + Chr4:40655016-40655035 MsG0480020403.01.T01:intron 30.0%
! ATCCATGTATGTTTTACGAA+TGG + Chr4:40656465-40656484 MsG0480020403.01.T01:intron 30.0%
! ATGGCAAATTAGTTTCAAAC+TGG - Chr4:40656314-40656333 None:intergenic 30.0%
! CTTTTGCCTACTAAAATTGA+AGG + Chr4:40655146-40655165 MsG0480020403.01.T01:intron 30.0%
! GTATGTTTTACGAATGGTTT+TGG + Chr4:40656471-40656490 MsG0480020403.01.T01:intron 30.0%
! TAGTGAGGTACATCTAATTT+TGG - Chr4:40654876-40654895 None:intergenic 30.0%
! TCATTTCATTTGCTACTTAC+GGG + Chr4:40656274-40656293 MsG0480020403.01.T01:intron 30.0%
!! AATTTCCAACTTTTTCTGGT+CGG - Chr4:40652869-40652888 None:intergenic 30.0%
!! ATGGACAACTTGTTATAATC+TGG + Chr4:40655292-40655311 MsG0480020403.01.T01:intron 30.0%
!! CATTTAGCAATGCTTGTTAT+AGG + Chr4:40655063-40655082 MsG0480020403.01.T01:intron 30.0%
!! CTTCAATTTTAGTAGGCAAA+AGG - Chr4:40655148-40655167 None:intergenic 30.0%
!! GAAAATAATTTTGAAAGGGG+TGG + Chr4:40656179-40656198 MsG0480020403.01.T01:intron 30.0%
!! TAACAAGTTTTGTGTGTTGA+TGG - Chr4:40653425-40653444 None:intergenic 30.0%
!! TTAGGAACTATTGTTGACTT+TGG - Chr4:40654376-40654395 None:intergenic 30.0%
!!! GAGTATAGTGCTTTTTTGAT+TGG + Chr4:40656691-40656710 MsG0480020403.01.T01:intron 30.0%
!!! TCTTTACCTTTTAGTCTTGT+TGG + Chr4:40657217-40657236 MsG0480020403.01.T01:intron 30.0%
AAAGAAGAAGAAAACAACGG+CGG + Chr4:40652932-40652951 MsG0480020403.01.T01:CDS 35.0%
AAGCCAGATAAAAAAGAGAC+AGG - Chr4:40654647-40654666 None:intergenic 35.0%
AATGAAATGAAGAGATCAGG+TGG - Chr4:40656264-40656283 None:intergenic 35.0%
AGATATATTCAGCAAATGCC+AGG - Chr4:40654459-40654478 None:intergenic 35.0%
AGATTAACCGATATACCAAG+GGG + Chr4:40654562-40654581 MsG0480020403.01.T01:CDS 35.0%
ATCAAGACATGGTACACAAA+AGG + Chr4:40657447-40657466 MsG0480020403.01.T01:three_prime_UTR 35.0%
ATGAAACTTTCTAATCTCGC+GGG - Chr4:40653203-40653222 None:intergenic 35.0%
CCATGAACAGTTGTTATCAA+TGG + Chr4:40655751-40655770 MsG0480020403.01.T01:intron 35.0%
CCATGGTTTGAATGATTATG+AGG + Chr4:40656775-40656794 MsG0480020403.01.T01:intron 35.0%
CCTCATAATCATTCAAACCA+TGG - Chr4:40656778-40656797 None:intergenic 35.0%
CTGACATATGTTCACATAGA+AGG + Chr4:40654412-40654431 MsG0480020403.01.T01:CDS 35.0%
CTTCTATGTGAACATATGTC+AGG - Chr4:40654414-40654433 None:intergenic 35.0%
GAAATTATAGGATGAGAGGA+AGG - Chr4:40654851-40654870 None:intergenic 35.0%
GAACTGATCCGACTTAATAT+TGG + Chr4:40657146-40657165 MsG0480020403.01.T01:intron 35.0%
GATACATCTTGTGTTTGGTT+TGG + Chr4:40656989-40657008 MsG0480020403.01.T01:intron 35.0%
GATGAAACTTTCTAATCTCG+CGG - Chr4:40653204-40653223 None:intergenic 35.0%
GATTGGCAAATATCAAGACA+TGG + Chr4:40657436-40657455 MsG0480020403.01.T01:three_prime_UTR 35.0%
GCAAATGAAATGAAGAGATC+AGG - Chr4:40656267-40656286 None:intergenic 35.0%
GCCACGAATTGTGTTAAATA+TGG - Chr4:40654935-40654954 None:intergenic 35.0%
GGAAAAACTTGTGAATTTCG+TGG + Chr4:40655167-40655186 MsG0480020403.01.T01:intron 35.0%
GTTCACATAGAAGGATATCA+AGG + Chr4:40654421-40654440 MsG0480020403.01.T01:CDS 35.0%
TATGTGAACATATGTCAGGT+TGG - Chr4:40654410-40654429 None:intergenic 35.0%
TCAAAGTCGTTTGTGTTAGA+TGG + Chr4:40655919-40655938 MsG0480020403.01.T01:intron 35.0%
TCATTACTTGCATTTCTCTC+TGG + Chr4:40653651-40653670 MsG0480020403.01.T01:CDS 35.0%
TCCAATCGGAATCTATTTCA+AGG - Chr4:40653794-40653813 None:intergenic 35.0%
TCTCCTAATTCAAAGTTGCA+AGG + Chr4:40654229-40654248 MsG0480020403.01.T01:intron 35.0%
TGAGATCCGCAAGATTTATT+AGG + Chr4:40655106-40655125 MsG0480020403.01.T01:intron 35.0%
TGTATCAGCATATTCTAACG+AGG - Chr4:40653458-40653477 None:intergenic 35.0%
TTACCTGAGAGAAACAAGAT+TGG - Chr4:40653386-40653405 None:intergenic 35.0%
TTCATCAAAGGGAATACCAA+TGG - Chr4:40655254-40655273 None:intergenic 35.0%
TTCTGGATACATCTTGTGTT+TGG + Chr4:40656984-40657003 MsG0480020403.01.T01:intron 35.0%
! AGAAGCTCCTTTTAGTACAT+AGG - Chr4:40655043-40655062 None:intergenic 35.0%
! ATTTTCAACATCTTCAGGGA+TGG - Chr4:40653570-40653589 None:intergenic 35.0%
! CCATTGATAACAACTGTTCA+TGG - Chr4:40655754-40655773 None:intergenic 35.0%
! CCTTCAAAGCATTTGACAAA+AGG - Chr4:40655728-40655747 None:intergenic 35.0%
! CCTTTTGTCAAATGCTTTGA+AGG + Chr4:40655725-40655744 MsG0480020403.01.T01:intron 35.0%
! GAAGCTCCTTTTAGTACATA+GGG - Chr4:40655042-40655061 None:intergenic 35.0%
! TAATTTGCCATGTAGTCTTG+TGG + Chr4:40656323-40656342 MsG0480020403.01.T01:intron 35.0%
! TGAGGTACATCTAATTTTGG+TGG - Chr4:40654873-40654892 None:intergenic 35.0%
! TTCTGGTGTAGATTTTTCCA+TGG + Chr4:40656758-40656777 MsG0480020403.01.T01:intron 35.0%
! TTCTTCTTTCTGTCGTTTAG+AGG - Chr4:40652921-40652940 None:intergenic 35.0%
! TTTAAAATGGAGGTGCAAAG+TGG - Chr4:40654107-40654126 None:intergenic 35.0%
!! CAGTGGTCTTGTACAATTAT+TGG + Chr4:40656956-40656975 MsG0480020403.01.T01:intron 35.0%
!! GCTCAATTTCCAACTTTTTC+TGG - Chr4:40652873-40652892 None:intergenic 35.0%
!! GTCGATTTTCAACATCTTCA+GGG - Chr4:40653574-40653593 None:intergenic 35.0%
!!! AACTTTTTTTCTTGCAGCGA+AGG + Chr4:40656023-40656042 MsG0480020403.01.T01:intron 35.0%
!!! CTGGATACTTATTTTGATCC+CGG + Chr4:40653693-40653712 MsG0480020403.01.T01:CDS 35.0%
!!! CTTCCTGTCTCTTTTTTATC+TGG + Chr4:40654641-40654660 MsG0480020403.01.T01:intron 35.0%
!!! GATGAATTCAGTTTTGACTG+TGG + Chr4:40656556-40656575 MsG0480020403.01.T01:intron 35.0%
!!! TTCAGTTTTGACTGTGGTTT+TGG + Chr4:40656562-40656581 MsG0480020403.01.T01:intron 35.0%
AAGATGTTGAAAATCGACCC+AGG + Chr4:40653576-40653595 MsG0480020403.01.T01:CDS 40.0%
AATCATGGTTTCTCTTTCGG+AGG - Chr4:40653962-40653981 None:intergenic 40.0%
ACGTCTTGTGCACAAAACAA+GGG - Chr4:40654082-40654101 None:intergenic 40.0%
ACTAACCGACCAGAAAAAGT+TGG + Chr4:40652861-40652880 MsG0480020403.01.T01:five_prime_UTR 40.0%
ACTTACGGGCAAGAAAACTA+AGG + Chr4:40656288-40656307 MsG0480020403.01.T01:intron 40.0%
AGATTCTCTTTGTTAGGAGC+AGG + Chr4:40656884-40656903 MsG0480020403.01.T01:intron 40.0%
AGGATATCAAGGATTCGAAG+AGG + Chr4:40654432-40654451 MsG0480020403.01.T01:CDS 40.0%
AGGTTGGATTCGAGACATTT+AGG - Chr4:40654394-40654413 None:intergenic 40.0%
ATATCCACCACAAGACTACA+TGG - Chr4:40656333-40656352 None:intergenic 40.0%
ATGTTTGGTCAGATATGCTC+GGG + Chr4:40657329-40657348 MsG0480020403.01.T01:three_prime_UTR 40.0%
CACTACCTTGTATGTTTACG+TGG + Chr4:40654891-40654910 MsG0480020403.01.T01:intron 40.0%
CAGGAAGAATTTGCACCTTA+AGG - Chr4:40654628-40654647 None:intergenic 40.0%
CATAGACGTTGTACAACTTG+AGG + Chr4:40653614-40653633 MsG0480020403.01.T01:CDS 40.0%
CATGTTTGGTCAGATATGCT+CGG + Chr4:40657328-40657347 MsG0480020403.01.T01:three_prime_UTR 40.0%
CGTAAACATACAAGGTAGTG+AGG - Chr4:40654891-40654910 None:intergenic 40.0%
GACAAATTCACTTTCACGCA+TGG - Chr4:40653922-40653941 None:intergenic 40.0%
GACATCCACGTAAACATACA+AGG - Chr4:40654899-40654918 None:intergenic 40.0%
GATTCAACTGTGTCTCCTTA+AGG + Chr4:40654610-40654629 MsG0480020403.01.T01:CDS 40.0%
GATTGGATCGATGTAAAGGA+CGG + Chr4:40653807-40653826 MsG0480020403.01.T01:CDS 40.0%
GCCTTGAAATAGATTCCGAT+TGG + Chr4:40653790-40653809 MsG0480020403.01.T01:CDS 40.0%
GCTGTGCAAAGTTTATGTTG+TGG + Chr4:40656825-40656844 MsG0480020403.01.T01:intron 40.0%
GCTTGAATGCTTGTGTTTCA+CGG + Chr4:40656723-40656742 MsG0480020403.01.T01:intron 40.0%
GGGCTTCATTAAGATGTCAT+TGG + Chr4:40657350-40657369 MsG0480020403.01.T01:three_prime_UTR 40.0%
GGTGGAAATTATAGGATGAG+AGG - Chr4:40654855-40654874 None:intergenic 40.0%
GTCCTTTACATCGATCCAAT+CGG - Chr4:40653808-40653827 None:intergenic 40.0%
GTTTGAATGATTATGAGGGC+TGG + Chr4:40656780-40656799 MsG0480020403.01.T01:intron 40.0%
TATCGAGAGACAGTTCTTCA+AGG - Chr4:40653306-40653325 None:intergenic 40.0%
TCACTGACAGGAAATTCTCT+TGG + Chr4:40653763-40653782 MsG0480020403.01.T01:CDS 40.0%
TTAGGAGAACTTGAAGCATG+TGG - Chr4:40654217-40654236 None:intergenic 40.0%
TTCAACTCGAATCTTCTGCT+GGG + Chr4:40654176-40654195 MsG0480020403.01.T01:intron 40.0%
TTCCGATTGGATCGATGTAA+AGG + Chr4:40653803-40653822 MsG0480020403.01.T01:CDS 40.0%
TTCTCTGTTAGGGTTGGAAT+CGG - Chr4:40653119-40653138 None:intergenic 40.0%
TTTGCGTCATTCGACATCAA+AGG + Chr4:40653992-40654011 MsG0480020403.01.T01:CDS 40.0%
! AACCGTCACCTTTAGAAACA+TGG + Chr4:40654347-40654366 MsG0480020403.01.T01:CDS 40.0%
! ACAAAGCATCTGATCAGCAT+AGG - Chr4:40656536-40656555 None:intergenic 40.0%
! ACCGTCACCTTTAGAAACAT+GGG + Chr4:40654348-40654367 MsG0480020403.01.T01:CDS 40.0%
! AGTATCCAGAGTTTCGAGTA+CGG - Chr4:40653682-40653701 None:intergenic 40.0%
! ATGTGGCATAAGATTGGTTC+TGG - Chr4:40652983-40653002 None:intergenic 40.0%
! CGTAGCTTTTGTTGCAGATT+TGG + Chr4:40655943-40655962 MsG0480020403.01.T01:intron 40.0%
! GAAATTGAGCGAAAGTACGA+TGG + Chr4:40652883-40652902 MsG0480020403.01.T01:exon 40.0%
! GATTGGCCCTATGTACTAAA+AGG + Chr4:40655033-40655052 MsG0480020403.01.T01:intron 40.0%
! GTACCAATCTTGTTTCTCTC+AGG + Chr4:40653380-40653399 MsG0480020403.01.T01:CDS 40.0%
! GTTCTGGTAGAGTGCTTAAT+CGG - Chr4:40652967-40652986 None:intergenic 40.0%
! TCCCATGTTTCTAAAGGTGA+CGG - Chr4:40654352-40654371 None:intergenic 40.0%
! TTCTAATCTCGCGGGATTTT+CGG - Chr4:40653195-40653214 None:intergenic 40.0%
! TTTGGCTCCCATGTTTCTAA+AGG - Chr4:40654358-40654377 None:intergenic 40.0%
!! AGAAGATTCGAGTTGAAGCA+GGG - Chr4:40654173-40654192 None:intergenic 40.0%
!! ATGTAGTCTTGTGGTGGATA+TGG + Chr4:40656332-40656351 MsG0480020403.01.T01:intron 40.0%
!! GGTCGATTTTCAACATCTTC+AGG - Chr4:40653575-40653594 None:intergenic 40.0%
!!! ACTGTGGTTTTGGTTTGCTT+CGG + Chr4:40656572-40656591 MsG0480020403.01.T01:intron 40.0%
!!! AGTGCTTTTTTGATTGGGTC+TGG + Chr4:40656697-40656716 MsG0480020403.01.T01:intron 40.0%
!!! CTTTTTTGATTGGGTCTGGT+TGG + Chr4:40656701-40656720 MsG0480020403.01.T01:intron 40.0%
!!! TGGTTTTTGGTGAGCTATTG+CGG + Chr4:40656642-40656661 MsG0480020403.01.T01:intron 40.0%
AAAAGACCAGCTAGCCGTAT+TGG - Chr4:40657493-40657512 None:intergenic 45.0%
AAAGTGGACACTTGAGGGTA+TGG - Chr4:40654972-40654991 None:intergenic 45.0%
AATTGCAACCTCTTGGAGGA+AGG - Chr4:40653744-40653763 None:intergenic 45.0%
ACATAGGGCCAATCCCAATT+AGG - Chr4:40655027-40655046 None:intergenic 45.0%
AGAGACAGTTCTTCAAGGTG+GGG - Chr4:40653301-40653320 None:intergenic 45.0%
AGAGGTTGCAATTCACTGAC+AGG + Chr4:40653751-40653770 MsG0480020403.01.T01:CDS 45.0%
AGCATCACAAAAGCCACGTT+GGG + Chr4:40653846-40653865 MsG0480020403.01.T01:CDS 45.0%
AGCATTTGACAAAAGGAGCG+AGG - Chr4:40655721-40655740 None:intergenic 45.0%
AGTGAATTGCAACCTCTTGG+AGG - Chr4:40653748-40653767 None:intergenic 45.0%
ATCCTCCGCAATTCTCTGTT+AGG - Chr4:40653130-40653149 None:intergenic 45.0%
ATGTCAAGTTCAACGATGCC+TGG - Chr4:40653597-40653616 None:intergenic 45.0%
ATTTGACAAAAGGAGCGAGG+GGG - Chr4:40655718-40655737 None:intergenic 45.0%
CACGTCTTGTGCACAAAACA+AGG - Chr4:40654083-40654102 None:intergenic 45.0%
CATTTGACAAAAGGAGCGAG+GGG - Chr4:40655719-40655738 None:intergenic 45.0%
CCAACCCTAACAGAGAATTG+CGG + Chr4:40653122-40653141 MsG0480020403.01.T01:CDS 45.0%
CTTCAACTCGAATCTTCTGC+TGG + Chr4:40654175-40654194 MsG0480020403.01.T01:intron 45.0%
GAGAGACAGTTCTTCAAGGT+GGG - Chr4:40653302-40653321 None:intergenic 45.0%
GAGAGGATGTGGCATAAGAT+TGG - Chr4:40652989-40653008 None:intergenic 45.0%
GCATGCTAGGCCAACTTATA+AGG - Chr4:40656117-40656136 None:intergenic 45.0%
GCATTTGACAAAAGGAGCGA+GGG - Chr4:40655720-40655739 None:intergenic 45.0%
GGAACTTTGGTCAAGAATCC+GGG - Chr4:40653714-40653733 None:intergenic 45.0%
GGGAACTTTGGTCAAGAATC+CGG - Chr4:40653715-40653734 None:intergenic 45.0%
GTCAGTGAATTGCAACCTCT+TGG - Chr4:40653751-40653770 None:intergenic 45.0%
TAGCATCACAAAAGCCACGT+TGG + Chr4:40653845-40653864 MsG0480020403.01.T01:CDS 45.0%
TATAGGATGAGAGGAAGGCA+GGG - Chr4:40654846-40654865 None:intergenic 45.0%
TCCTCCGCAATTCTCTGTTA+GGG - Chr4:40653129-40653148 None:intergenic 45.0%
TCTTGTGCACAAAACAAGGG+AGG - Chr4:40654079-40654098 None:intergenic 45.0%
TGAGTTTAGGCATGCATGCT+AGG - Chr4:40656130-40656149 None:intergenic 45.0%
TGGCTATGGAGGTTCTTGTT+GGG - Chr4:40653018-40653037 None:intergenic 45.0%
TGTCAAGTTCAACGATGCCT+GGG - Chr4:40653596-40653615 None:intergenic 45.0%
TGTTTGGTCAGATATGCTCG+GGG + Chr4:40657330-40657349 MsG0480020403.01.T01:three_prime_UTR 45.0%
TTATAGGATGAGAGGAAGGC+AGG - Chr4:40654847-40654866 None:intergenic 45.0%
TTATGACCAATACGGCTAGC+TGG + Chr4:40657484-40657503 MsG0480020403.01.T01:three_prime_UTR 45.0%
! AAGTACAAGTTGAGCTCCAC+GGG - Chr4:40653338-40653357 None:intergenic 45.0%
! CTCGATATTGATAACTCCCG+TGG + Chr4:40653319-40653338 MsG0480020403.01.T01:CDS 45.0%
! CTGGAGACTGTGTTGATATG+TGG + Chr4:40653257-40653276 MsG0480020403.01.T01:CDS 45.0%
! CTGTTTCGAGCCTCATTTTG+CGG + Chr4:40656609-40656628 MsG0480020403.01.T01:intron 45.0%
! GAAGTACAAGTTGAGCTCCA+CGG - Chr4:40653339-40653358 None:intergenic 45.0%
! GTATCCAGAGTTTCGAGTAC+GGG - Chr4:40653681-40653700 None:intergenic 45.0%
! GTCATTGTGTCCCTTGTTGT+TGG + Chr4:40654314-40654333 MsG0480020403.01.T01:intron 45.0%
! TATCCAGAGTTTCGAGTACG+GGG - Chr4:40653680-40653699 None:intergenic 45.0%
! TGGTAGAGTGCTTAATCGGT+CGG - Chr4:40652963-40652982 None:intergenic 45.0%
!! AGTCTTGTGGTGGATATGGA+GGG + Chr4:40656336-40656355 MsG0480020403.01.T01:intron 45.0%
!! CAGAAGATTCGAGTTGAAGC+AGG - Chr4:40654174-40654193 None:intergenic 45.0%
!! CTTTTCGACCGTTGATGAAG+TGG + Chr4:40656388-40656407 MsG0480020403.01.T01:intron 45.0%
!! TAGTCTTGTGGTGGATATGG+AGG + Chr4:40656335-40656354 MsG0480020403.01.T01:intron 45.0%
!! TTGTGTCCCTTGTTGTTGGT+AGG + Chr4:40654318-40654337 MsG0480020403.01.T01:intron 45.0%
!! TTTGCCATGTAGTCTTGTGG+TGG + Chr4:40656326-40656345 MsG0480020403.01.T01:intron 45.0%
!!! CTTGTTTTGTGCACAAGACG+TGG + Chr4:40654081-40654100 MsG0480020403.01.T01:intron 45.0%
!!! TTTTGGTTTGCTTCGGTTGC+AGG + Chr4:40656579-40656598 MsG0480020403.01.T01:intron 45.0%
AAAGCCACGTTGGGCATCAT+TGG + Chr4:40653855-40653874 MsG0480020403.01.T01:CDS 50.0%
AATGTTTGGCAGTGCGCACT+TGG + Chr4:40657277-40657296 MsG0480020403.01.T01:intron 50.0%
ACAAGACCACTGCACTAGCA+GGG - Chr4:40656948-40656967 None:intergenic 50.0%
ACCCTAACAGAGAATTGCGG+AGG + Chr4:40653125-40653144 MsG0480020403.01.T01:CDS 50.0%
CATGGTTTCTCTTTCGGAGG+AGG - Chr4:40653959-40653978 None:intergenic 50.0%
CATTGGCAACTTGCAGAGTG+TGG + Chr4:40653872-40653891 MsG0480020403.01.T01:CDS 50.0%
CCGCAATTCTCTGTTAGGGT+TGG - Chr4:40653125-40653144 None:intergenic 50.0%
CCTCCTCCTACCAACAACAA+GGG - Chr4:40654327-40654346 None:intergenic 50.0%
CGAGAGACAGTTCTTCAAGG+TGG - Chr4:40653303-40653322 None:intergenic 50.0%
CTACACCAGAACCAGACACA+AGG - Chr4:40656749-40656768 None:intergenic 50.0%
CTATGGAGGTTCTTGTTGGG+AGG - Chr4:40653015-40653034 None:intergenic 50.0%
GAAGAAGAAAACAACGGCGG+AGG + Chr4:40652935-40652954 MsG0480020403.01.T01:CDS 50.0%
GACGTTGTACAACTTGAGGC+AGG + Chr4:40653618-40653637 MsG0480020403.01.T01:CDS 50.0%
GATGTAAAGGACGGTGGTAG+TGG + Chr4:40653816-40653835 MsG0480020403.01.T01:CDS 50.0%
GTGGCTATGGAGGTTCTTGT+TGG - Chr4:40653019-40653038 None:intergenic 50.0%
GTTAGGGTTGGAATCGGAGT+CGG - Chr4:40653113-40653132 None:intergenic 50.0%
TACAAGACCACTGCACTAGC+AGG - Chr4:40656949-40656968 None:intergenic 50.0%
TCAAGGATTCGAAGAGGACC+TGG + Chr4:40654438-40654457 MsG0480020403.01.T01:CDS 50.0%
TCCTCCTCCTACCAACAACA+AGG - Chr4:40654328-40654347 None:intergenic 50.0%
TGAGAGGAAGGCAGGGAAAA+AGG - Chr4:40654839-40654858 None:intergenic 50.0%
TGGATCGATGTAAAGGACGG+TGG + Chr4:40653810-40653829 MsG0480020403.01.T01:CDS 50.0%
TTAAGGAGCTGTCTTGGCGT+TGG + Chr4:40656420-40656439 MsG0480020403.01.T01:intron 50.0%
TTCTTGTTGGGAGGAAGGAG+AGG - Chr4:40653006-40653025 None:intergenic 50.0%
TTGGTGAGCTATTGCGGTCT+GGG + Chr4:40656648-40656667 MsG0480020403.01.T01:intron 50.0%
TTTGCTTCGGTTGCAGGTTC+AGG + Chr4:40656585-40656604 MsG0480020403.01.T01:intron 50.0%
TTTGGTGAGCTATTGCGGTC+TGG + Chr4:40656647-40656666 MsG0480020403.01.T01:intron 50.0%
! ACAACTTGAGGCAGGCATTG+TGG + Chr4:40653626-40653645 MsG0480020403.01.T01:CDS 50.0%
! TTTCGAGCCTCATTTTGCGG+CGG + Chr4:40656612-40656631 MsG0480020403.01.T01:intron 50.0%
!! CTGTCTTGGCGTTGGTTTCT+AGG + Chr4:40656428-40656447 MsG0480020403.01.T01:intron 50.0%
!! GCGTTGGTTTCTAGGAAGAG+TGG + Chr4:40656436-40656455 MsG0480020403.01.T01:intron 50.0%
!! GTCTTGTGGTGGATATGGAG+GGG + Chr4:40656337-40656356 MsG0480020403.01.T01:intron 50.0%
!! TGTCCCTTGTTGTTGGTAGG+AGG + Chr4:40654321-40654340 MsG0480020403.01.T01:intron 50.0%
ACACAGACCGCCGCAAAATG+AGG - Chr4:40656622-40656641 None:intergenic 55.0%
CCTAGCCACATCCTGCTCAA+CGG - Chr4:40656500-40656519 None:intergenic 55.0%
CTAGCCACATCCTGCTCAAC+GGG - Chr4:40656499-40656518 None:intergenic 55.0%
CTTTCACCCTGCTAGTGCAG+TGG + Chr4:40656939-40656958 MsG0480020403.01.T01:intron 55.0%
GCTTCCAGAGGTTGTTCCAG+CGG - Chr4:40653060-40653079 None:intergenic 55.0%
GGAGGTTCTTGTTGGGAGGA+AGG - Chr4:40653011-40653030 None:intergenic 55.0%
GGCAGAGCCCCTTGGTATAT+CGG - Chr4:40654572-40654591 None:intergenic 55.0%
GTTGCCAATGATGCCCAACG+TGG - Chr4:40653862-40653881 None:intergenic 55.0%
GTTGCTGTCGAGCTCGACTT+GGG + Chr4:40657058-40657077 MsG0480020403.01.T01:intron 55.0%
GTTGGAATCGGAGTCGGTGT+TGG - Chr4:40653107-40653126 None:intergenic 55.0%
TGCAACCTCTTGGAGGAAGG+TGG - Chr4:40653741-40653760 None:intergenic 55.0%
TGGCAACTTGCAGAGTGTGG+AGG + Chr4:40653875-40653894 MsG0480020403.01.T01:CDS 55.0%
TGGTGAGCTATTGCGGTCTG+GGG + Chr4:40656649-40656668 MsG0480020403.01.T01:intron 55.0%
TTCGGAGGAGGCTGAGCATA+GGG - Chr4:40653947-40653966 None:intergenic 55.0%
TTGCCCCGTACTCGAAACTC+TGG + Chr4:40653674-40653693 MsG0480020403.01.T01:CDS 55.0%
TTGGGAGGAAGGAGAGGATG+TGG - Chr4:40653000-40653019 None:intergenic 55.0%
TTTCGGAGGAGGCTGAGCAT+AGG - Chr4:40653948-40653967 None:intergenic 55.0%
! ATGTGGCTCCGTGCTGCTAT+TGG + Chr4:40653274-40653293 MsG0480020403.01.T01:CDS 55.0%
! CATTTTGCGGCGGTCTGTGT+TGG + Chr4:40656622-40656641 MsG0480020403.01.T01:intron 55.0%
! GGTGTTGGAGTCGAAGTGGA+AGG - Chr4:40653092-40653111 None:intergenic 55.0%
! GTGTTTCACGGCCTTGTGTC+TGG + Chr4:40656735-40656754 MsG0480020403.01.T01:intron 55.0%
!! AAGGACGGTGGTAGTGGTAG+CGG + Chr4:40653822-40653841 MsG0480020403.01.T01:CDS 55.0%
!! AGTCGGTGTTGGAGTCGAAG+TGG - Chr4:40653096-40653115 None:intergenic 55.0%
!! CCCTTGTTGTTGGTAGGAGG+AGG + Chr4:40654324-40654343 MsG0480020403.01.T01:intron 55.0%
!!! CGGCGGTCTGTGTTGGTTTT+TGG + Chr4:40656629-40656648 MsG0480020403.01.T01:intron 55.0%
AAAAGGAGCGAGGGGGAAGG+AGG - Chr4:40655711-40655730 None:intergenic 60.0%
AAAGGAGCGAGGGGGAAGGA+GGG - Chr4:40655710-40655729 None:intergenic 60.0%
CCGTTGAGCAGGATGTGGCT+AGG + Chr4:40656497-40656516 MsG0480020403.01.T01:intron 60.0%
CCTCTTGGAGGAAGGTGGCA+CGG - Chr4:40653736-40653755 None:intergenic 60.0%
CGTTGCTGTCGAGCTCGACT+TGG + Chr4:40657057-40657076 MsG0480020403.01.T01:intron 60.0%
CTCTTGGAGGAAGGTGGCAC+GGG - Chr4:40653735-40653754 None:intergenic 60.0%
GACAAAAGGAGCGAGGGGGA+AGG - Chr4:40655714-40655733 None:intergenic 60.0%
GACGAGAGGAAGGGTGGCTA+TGG - Chr4:40653032-40653051 None:intergenic 60.0%
GAGAGGAAGGGTGGCTATGG+AGG - Chr4:40653029-40653048 None:intergenic 60.0%
GGAAGGTGGCACGGGAACTT+TGG - Chr4:40653727-40653746 None:intergenic 60.0%
GGTGAGCTATTGCGGTCTGG+GGG + Chr4:40656650-40656669 MsG0480020403.01.T01:intron 60.0%
GGTGGGGTCCAATAGCAGCA+CGG - Chr4:40653285-40653304 None:intergenic 60.0%
GTGAGCTATTGCGGTCTGGG+GGG + Chr4:40656651-40656670 MsG0480020403.01.T01:intron 60.0%
TGACATGTGGCAGAGCCCCT+TGG - Chr4:40654580-40654599 None:intergenic 60.0%
! CACGGCCTTGTGTCTGGTTC+TGG + Chr4:40656741-40656760 MsG0480020403.01.T01:intron 60.0%
! GAGCGAAAGTACGATGGCGC+TGG + Chr4:40652889-40652908 MsG0480020403.01.T01:exon 60.0%
!! AGGCGTCGAGATGCTTCCAG+AGG - Chr4:40653072-40653091 None:intergenic 60.0%
!!! GGTTTTGGGACCCGTTGAGC+AGG + Chr4:40656486-40656505 MsG0480020403.01.T01:intron 60.0%
AAGGAGCGAGGGGGAAGGAG+GGG - Chr4:40655709-40655728 None:intergenic 65.0%
AGCGGCGAGAGACGAGAGGA+AGG - Chr4:40653042-40653061 None:intergenic 65.0%
CCGTGCCACCTTCCTCCAAG+AGG + Chr4:40653733-40653752 MsG0480020403.01.T01:CDS 65.0%
CTCGCCGCTGGAACAACCTC+TGG + Chr4:40653053-40653072 MsG0480020403.01.T01:CDS 65.0%
GCGAGAGACGAGAGGAAGGG+TGG - Chr4:40653038-40653057 None:intergenic 65.0%
GCGGCGAGAGACGAGAGGAA+GGG - Chr4:40653041-40653060 None:intergenic 65.0%
GGGACCCGTTGAGCAGGATG+TGG + Chr4:40656492-40656511 MsG0480020403.01.T01:intron 65.0%
TTCCAGCGGCGAGAGACGAG+AGG - Chr4:40653046-40653065 None:intergenic 65.0%
TTCCTCTCGTCTCTCGCCGC+TGG + Chr4:40653041-40653060 MsG0480020403.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr4 gene 40652858 40657612 40652858 ID=MsG0480020403.01;Name=MsG0480020403.01
Chr4 mRNA 40652858 40657612 40652858 ID=MsG0480020403.01.T01;Parent=MsG0480020403.01;Name=MsG0480020403.01.T01;_AED=0.09;_eAED=0.09;_QI=44|0.66|1|1|0.66|0.5|4|325|428
Chr4 exon 40652858 40653401 40652858 ID=MsG0480020403.01.T01:exon:5833;Parent=MsG0480020403.01.T01
Chr4 exon 40653518 40654013 40653518 ID=MsG0480020403.01.T01:exon:5834;Parent=MsG0480020403.01.T01
Chr4 exon 40654340 40654631 40654340 ID=MsG0480020403.01.T01:exon:5835;Parent=MsG0480020403.01.T01
Chr4 exon 40657289 40657612 40657289 ID=MsG0480020403.01.T01:exon:5836;Parent=MsG0480020403.01.T01
Chr4 five_prime_UTR 40652858 40652901 40652858 ID=MsG0480020403.01.T01:five_prime_utr;Parent=MsG0480020403.01.T01
Chr4 CDS 40652902 40653401 40652902 ID=MsG0480020403.01.T01:cds;Parent=MsG0480020403.01.T01
Chr4 CDS 40653518 40654013 40653518 ID=MsG0480020403.01.T01:cds;Parent=MsG0480020403.01.T01
Chr4 CDS 40654340 40654630 40654340 ID=MsG0480020403.01.T01:cds;Parent=MsG0480020403.01.T01
Chr4 three_prime_UTR 40654631 40654631 40654631 ID=MsG0480020403.01.T01:three_prime_utr;Parent=MsG0480020403.01.T01
Chr4 three_prime_UTR 40657289 40657612 40657289 ID=MsG0480020403.01.T01:three_prime_utr;Parent=MsG0480020403.01.T01
Gene Sequence

>MsG0480020403.01.T01

ATGGCGCTGGAGTTAACCTCTAAACGACAGAAAGAAGAAGAAAACAACGGCGGAGGCACCGACCGATTAAGCACTCTACCAGAACCAATCTTATGCCACATCCTCTCCTTCCTCCCAACAAGAACCTCCATAGCCACCCTTCCTCTCGTCTCTCGCCGCTGGAACAACCTCTGGAAGCATCTCGACGCCTTCCACTTCGACTCCAACACCGACTCCGATTCCAACCCTAACAGAGAATTGCGGAGGATTTTCAAAAGATTTGCGTTCTTCGTCAACGCAGTTCTATCGCTCCGAAAATCCCGCGAGATTAGAAAGTTTCATCTCAGTTGTAGTATCTCTGATGTTTATAAGTTTTCTGGAGACTGTGTTGATATGTGGCTCCGTGCTGCTATTGGACCCCACCTTGAAGAACTGTCTCTCGATATTGATAACTCCCGTGGAGCTCAACTTGTACTTCTTCCGAATTCATTCTTCGATTGTACCAATCTTGTTTCTCTCAGTCTTATCGGTTCAATCCATATGATGATTCAACATTCTTCAGTTCATTTTCCATCCCTGAAGATGTTGAAAATCGACCCAGGCATCGTTGAACTTGACATAGACGTTGTACAACTTGAGGCAGGCATTGTGGATTCATTACTTGCATTTCTCTCTGGTTGCCCCGTACTCGAAACTCTGGATACTTATTTTGATCCCGGATTCTTGACCAAAGTTCCCGTGCCACCTTCCTCCAAGAGGTTGCAATTCACTGACAGGAAATTCTCTTGGACTTGCCTTGAAATAGATTCCGATTGGATCGATGTAAAGGACGGTGGTAGTGGTAGCGGTAGCATCACAAAAGCCACGTTGGGCATCATTGGCAACTTGCAGAGTGTGGAGGAAGCATATCTTGATGTCTTTTCCATGCGTGAAAGTGAATTTGTCGACCCTATGCTCAGCCTCCTCCGAAAGAGAAACCATGATTTACATCTACTTTTGCGTCATTCGACATCAAAGGAGGAGGAACCGTCACCTTTAGAAACATGGGAGCCAAAGTCAACAATAGTTCCTAAATGTCTCGAATCCAACCTGACATATGTTCACATAGAAGGATATCAAGGATTCGAAGAGGACCTGGCATTTGCTGAATATATCTTGTGTAACGGACTTGTTTTGCACACAATGCTTATATTTTTTGATACTTCAATGGATCTAACTAACAAGTATCGTTCACTCAAAAGATTAACCGATATACCAAGGGGCTCTGCCACATGTCAACTTAAATTTGATTCAACTGTGTCTCCTTAA
Protein sequence

>MsG0480020403.01.T01

MALELTSKRQKEEENNGGGTDRLSTLPEPILCHILSFLPTRTSIATLPLVSRRWNNLWKHLDAFHFDSNTDSDSNPNRELRRIFKRFAFFVNAVLSLRKSREIRKFHLSCSISDVYKFSGDCVDMWLRAAIGPHLEELSLDIDNSRGAQLVLLPNSFFDCTNLVSLSLIGSIHMMIQHSSVHFPSLKMLKIDPGIVELDIDVVQLEAGIVDSLLAFLSGCPVLETLDTYFDPGFLTKVPVPPSSKRLQFTDRKFSWTCLEIDSDWIDVKDGGSGSGSITKATLGIIGNLQSVEEAYLDVFSMRESEFVDPMLSLLRKRNHDLHLLLRHSTSKEEEPSPLETWEPKSTIVPKCLESNLTYVHIEGYQGFEEDLAFAEYILCNGLVLHTMLIFFDTSMDLTNKYRSLKRLTDIPRGSATCQLKFDSTVSP*