Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044816.01.T01 | KEH19814.1 | 86.824 | 296 | 37 | 2 | 3 | 297 | 156 | 450 | 1.06E-168 | 485 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044816.01.T01 | Q9FJC1 | 26.49 | 302 | 189 | 11 | 13 | 296 | 139 | 425 | 5.53E-15 | 78.2 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044816.01.T01 | A0A072TQN8 | 86.824 | 296 | 37 | 2 | 3 | 297 | 156 | 450 | 5.04e-169 | 485 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044816.01.T01 | MTR_8g468840 | 86.824 | 296 | 37 | 2 | 3 | 297 | 156 | 450 | 1.28e-172 | 485 |
MsG0880044816.01.T01 | MTR_8g062270 | 64.646 | 297 | 99 | 3 | 3 | 296 | 160 | 453 | 1.74e-123 | 361 |
MsG0880044816.01.T01 | MTR_5g092960 | 67.657 | 303 | 89 | 3 | 3 | 297 | 161 | 462 | 1.68e-122 | 358 |
MsG0880044816.01.T01 | MTR_8g467800 | 59.933 | 297 | 111 | 4 | 7 | 296 | 157 | 452 | 2.54e-113 | 335 |
MsG0880044816.01.T01 | MTR_4g032730 | 55.836 | 317 | 115 | 4 | 1 | 297 | 156 | 467 | 2.47e-105 | 315 |
MsG0880044816.01.T01 | MTR_8g468760 | 56.856 | 299 | 90 | 7 | 3 | 296 | 154 | 418 | 2.45e-97 | 293 |
MsG0880044816.01.T01 | MTR_8g468810 | 51.623 | 308 | 128 | 8 | 1 | 296 | 164 | 462 | 1.68e-93 | 285 |
MsG0880044816.01.T01 | MTR_2g083840 | 53.512 | 299 | 129 | 4 | 3 | 296 | 163 | 456 | 5.72e-91 | 278 |
MsG0880044816.01.T01 | MTR_8g058970 | 50.000 | 310 | 133 | 9 | 1 | 296 | 175 | 476 | 3.16e-83 | 258 |
MsG0880044816.01.T01 | MTR_5g092960 | 67.453 | 212 | 61 | 2 | 3 | 206 | 161 | 372 | 6.77e-72 | 227 |
MsG0880044816.01.T01 | MTR_8g014260 | 43.390 | 295 | 157 | 5 | 5 | 296 | 163 | 450 | 2.82e-67 | 217 |
MsG0880044816.01.T01 | MTR_8g468810 | 53.052 | 213 | 89 | 5 | 1 | 206 | 164 | 372 | 8.60e-62 | 200 |
MsG0880044816.01.T01 | MTR_4g024710 | 41.611 | 298 | 160 | 9 | 4 | 296 | 58 | 346 | 1.94e-60 | 196 |
MsG0880044816.01.T01 | MTR_8g014210 | 49.138 | 232 | 109 | 5 | 67 | 296 | 6 | 230 | 2.43e-60 | 192 |
MsG0880044816.01.T01 | MTR_8g445780 | 48.207 | 251 | 119 | 6 | 3 | 251 | 148 | 389 | 8.72e-59 | 193 |
MsG0880044816.01.T01 | MTR_4g024745 | 44.361 | 266 | 137 | 7 | 4 | 266 | 12 | 269 | 1.40e-52 | 174 |
MsG0880044816.01.T01 | MTR_8g469020 | 37.540 | 309 | 172 | 7 | 3 | 296 | 148 | 450 | 2.31e-47 | 165 |
MsG0880044816.01.T01 | MTR_8g467800 | 58.140 | 172 | 63 | 3 | 7 | 174 | 157 | 323 | 3.88e-47 | 161 |
MsG0880044816.01.T01 | MTR_8g058965 | 39.355 | 310 | 164 | 9 | 3 | 296 | 154 | 455 | 2.79e-45 | 159 |
MsG0880044816.01.T01 | MTR_8g468810 | 56.463 | 147 | 61 | 2 | 1 | 147 | 164 | 307 | 6.31e-45 | 155 |
MsG0880044816.01.T01 | MTR_8g468810 | 56.463 | 147 | 61 | 2 | 1 | 147 | 164 | 307 | 7.08e-45 | 155 |
MsG0880044816.01.T01 | MTR_8g468810 | 56.463 | 147 | 61 | 2 | 1 | 147 | 164 | 307 | 1.41e-44 | 155 |
MsG0880044816.01.T01 | MTR_8g062310 | 36.429 | 280 | 155 | 6 | 19 | 296 | 169 | 427 | 1.31e-41 | 149 |
MsG0880044816.01.T01 | MTR_8g070950 | 34.114 | 299 | 177 | 6 | 3 | 296 | 150 | 433 | 2.49e-39 | 143 |
MsG0880044816.01.T01 | MTR_8g062080 | 34.983 | 303 | 167 | 7 | 3 | 296 | 163 | 444 | 7.39e-39 | 142 |
MsG0880044816.01.T01 | MTR_8g062300 | 33.861 | 316 | 171 | 8 | 2 | 296 | 178 | 476 | 1.58e-37 | 139 |
MsG0880044816.01.T01 | MTR_8g062010 | 35.172 | 290 | 168 | 8 | 12 | 296 | 155 | 429 | 9.04e-37 | 136 |
MsG0880044816.01.T01 | MTR_4g050250 | 38.911 | 257 | 137 | 6 | 3 | 243 | 166 | 418 | 5.34e-36 | 134 |
MsG0880044816.01.T01 | MTR_8g014160 | 33.445 | 299 | 134 | 8 | 3 | 296 | 186 | 424 | 1.08e-29 | 117 |
MsG0880044816.01.T01 | MTR_8g077460 | 32.319 | 263 | 146 | 11 | 52 | 296 | 126 | 374 | 1.54e-29 | 115 |
MsG0880044816.01.T01 | MTR_2g086020 | 42.361 | 144 | 77 | 2 | 155 | 296 | 175 | 314 | 7.43e-25 | 102 |
MsG0880044816.01.T01 | MTR_5g084070 | 33.212 | 274 | 161 | 12 | 25 | 289 | 159 | 419 | 1.72e-21 | 94.0 |
MsG0880044816.01.T01 | MTR_5g080710 | 32.759 | 290 | 173 | 11 | 11 | 289 | 168 | 446 | 4.27e-16 | 78.6 |
MsG0880044816.01.T01 | MTR_3g071850 | 29.032 | 279 | 141 | 12 | 18 | 289 | 173 | 401 | 2.88e-15 | 76.6 |
MsG0880044816.01.T01 | MTR_8g014230 | 57.895 | 57 | 23 | 1 | 211 | 267 | 19 | 74 | 8.22e-15 | 69.3 |
MsG0880044816.01.T01 | MTR_3g087260 | 27.660 | 329 | 175 | 10 | 19 | 296 | 140 | 456 | 3.76e-13 | 69.7 |
MsG0880044816.01.T01 | MTR_3g108560 | 26.923 | 286 | 146 | 10 | 19 | 296 | 158 | 388 | 3.89e-13 | 69.3 |
MsG0880044816.01.T01 | MTR_7g075820 | 25.448 | 279 | 146 | 10 | 18 | 294 | 173 | 391 | 1.44e-12 | 67.8 |
MsG0880044816.01.T01 | MTR_2g008320 | 25.442 | 283 | 151 | 12 | 16 | 294 | 198 | 424 | 1.92e-12 | 67.8 |
MsG0880044816.01.T01 | MTR_2g007550 | 31.111 | 135 | 82 | 3 | 160 | 294 | 209 | 332 | 7.12e-12 | 65.5 |
MsG0880044816.01.T01 | MTR_5g008950 | 27.468 | 233 | 137 | 7 | 88 | 296 | 140 | 364 | 9.38e-12 | 65.5 |
MsG0880044816.01.T01 | MTR_0543s0010 | 26.207 | 290 | 146 | 8 | 15 | 296 | 220 | 449 | 1.12e-11 | 65.5 |
MsG0880044816.01.T01 | MTR_1089s0010 | 34.286 | 140 | 78 | 5 | 165 | 297 | 247 | 379 | 1.15e-11 | 65.1 |
MsG0880044816.01.T01 | MTR_4g056030 | 28.571 | 287 | 170 | 12 | 3 | 266 | 137 | 411 | 1.70e-11 | 64.7 |
MsG0880044816.01.T01 | MTR_1g108800 | 25.083 | 303 | 164 | 13 | 28 | 294 | 64 | 339 | 8.24e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044816.01.T01 | AT4G10420 | 29.333 | 300 | 187 | 10 | 3 | 296 | 41 | 321 | 3.08e-19 | 86.7 |
MsG0880044816.01.T01 | AT5G53635 | 26.490 | 302 | 189 | 11 | 13 | 296 | 139 | 425 | 5.64e-16 | 78.2 |
MsG0880044816.01.T01 | AT4G26340 | 29.249 | 253 | 160 | 9 | 17 | 263 | 145 | 384 | 1.42e-15 | 77.0 |
MsG0880044816.01.T01 | AT5G38570 | 26.429 | 280 | 166 | 8 | 31 | 296 | 122 | 375 | 2.83e-15 | 75.9 |
MsG0880044816.01.T01 | AT5G60610 | 28.846 | 260 | 151 | 8 | 19 | 263 | 143 | 383 | 1.70e-14 | 73.6 |
MsG0880044816.01.T01 | AT5G60610 | 28.846 | 260 | 151 | 8 | 19 | 263 | 143 | 383 | 1.70e-14 | 73.6 |
MsG0880044816.01.T01 | AT5G56700 | 28.148 | 270 | 164 | 8 | 19 | 278 | 108 | 357 | 2.53e-14 | 72.8 |
MsG0880044816.01.T01 | AT5G56820 | 28.990 | 307 | 175 | 13 | 9 | 294 | 139 | 423 | 8.17e-14 | 71.6 |
MsG0880044816.01.T01 | AT5G22610 | 26.198 | 313 | 187 | 13 | 15 | 295 | 164 | 464 | 8.95e-14 | 71.6 |
MsG0880044816.01.T01 | AT5G56325 | 27.239 | 268 | 168 | 11 | 41 | 296 | 11 | 263 | 9.97e-14 | 70.1 |
MsG0880044816.01.T01 | AT5G22610 | 25.084 | 299 | 178 | 12 | 15 | 295 | 164 | 434 | 7.15e-13 | 68.9 |
MsG0880044816.01.T01 | AT5G56800 | 26.644 | 289 | 176 | 11 | 23 | 297 | 78 | 344 | 1.81e-12 | 67.4 |
MsG0880044816.01.T01 | AT5G56420 | 27.723 | 303 | 178 | 13 | 6 | 296 | 148 | 421 | 2.06e-12 | 67.4 |
MsG0880044816.01.T01 | AT5G56420 | 27.723 | 303 | 178 | 13 | 6 | 296 | 148 | 421 | 2.06e-12 | 67.4 |
MsG0880044816.01.T01 | AT5G56420 | 27.723 | 303 | 178 | 13 | 6 | 296 | 148 | 421 | 2.06e-12 | 67.4 |
MsG0880044816.01.T01 | AT1G05080 | 26.129 | 310 | 199 | 10 | 3 | 297 | 145 | 439 | 6.16e-12 | 66.2 |
MsG0880044816.01.T01 | AT5G62970 | 24.916 | 297 | 181 | 9 | 21 | 297 | 175 | 449 | 8.19e-12 | 65.9 |
MsG0880044816.01.T01 | AT5G22730 | 24.595 | 309 | 184 | 11 | 18 | 294 | 172 | 463 | 3.07e-11 | 63.9 |
MsG0880044816.01.T01 | AT5G22730 | 24.595 | 309 | 184 | 11 | 18 | 294 | 172 | 463 | 3.07e-11 | 63.9 |
MsG0880044816.01.T01 | AT5G56390 | 27.213 | 305 | 193 | 12 | 3 | 296 | 138 | 424 | 4.04e-11 | 63.5 |
MsG0880044816.01.T01 | AT3G49480 | 26.056 | 284 | 164 | 12 | 3 | 266 | 14 | 271 | 7.19e-11 | 62.4 |
Find 88 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGGTGAATATCTTTCTTTC+TGG | 0.130738 | 8:+49605486 | MsG0880044816.01.T01:CDS |
TTCTGTTATCTGACATAAAA+AGG | 0.149407 | 8:-49608722 | None:intergenic |
CATCTCAATGAAATTGAATT+TGG | 0.194074 | 8:-49606439 | None:intergenic |
TAGTTTCAGTATTAGTATTT+TGG | 0.249413 | 8:+49608604 | MsG0880044816.01.T01:intron |
GTGCTGTGATTTGCTGTTGA+TGG | 0.258649 | 8:+49608688 | MsG0880044816.01.T01:three_prime_UTR |
TAAAGCAAATAACGAAATTC+TGG | 0.291092 | 8:-49605963 | None:intergenic |
CTTTATAGTAACCTTATGTT+TGG | 0.312912 | 8:+49608638 | MsG0880044816.01.T01:three_prime_UTR |
GACCTTTACTTCTGAACCTT+TGG | 0.314656 | 8:+49605536 | MsG0880044816.01.T01:CDS |
CAAAACATGATAACATCTTA+TGG | 0.317251 | 8:-49608506 | None:intergenic |
ATTAAATTTGCAGCATATCT+AGG | 0.323413 | 8:+49606269 | MsG0880044816.01.T01:CDS |
TGAACCTTTGGCCATACTTC+GGG | 0.331951 | 8:+49605548 | MsG0880044816.01.T01:CDS |
CTTTGCAGCTCGCAGGGCCA+TGG | 0.334871 | 8:+49608410 | MsG0880044816.01.T01:intron |
ACAGAGATCAAGATAACTAT+AGG | 0.357468 | 8:-49608534 | None:intergenic |
ATCAGCCATGCAGCAACTAT+TGG | 0.363992 | 8:+49605678 | MsG0880044816.01.T01:CDS |
CATTTCTCTTTGCAGCTCGC+AGG | 0.365568 | 8:+49608403 | MsG0880044816.01.T01:intron |
TTTGATTCTTCACCTGCATA+TGG | 0.374619 | 8:+49606191 | MsG0880044816.01.T01:CDS |
GGAAGTTGGCACCCGAAGTA+TGG | 0.375232 | 8:-49605559 | None:intergenic |
TTTCAATTACAAGACTCTTC+GGG | 0.379284 | 8:+49605402 | MsG0880044816.01.T01:CDS |
TTGAAGACAATGCTTATTGA+TGG | 0.381889 | 8:+49606344 | MsG0880044816.01.T01:CDS |
TTCAACCTCTTTAAGGAAGT+TGG | 0.391442 | 8:-49605573 | None:intergenic |
GTTTCAATTACAAGACTCTT+CGG | 0.396791 | 8:+49605401 | MsG0880044816.01.T01:CDS |
CTGAACCTTTGGCCATACTT+CGG | 0.415519 | 8:+49605547 | MsG0880044816.01.T01:CDS |
CTGCCACGTTCTCGAAGATC+TGG | 0.417848 | 8:+49605509 | MsG0880044816.01.T01:CDS |
ATTATCGTTGACACTAAAGT+TGG | 0.418001 | 8:+49605597 | MsG0880044816.01.T01:CDS |
CAGCTCGAGATGTTTAATTC+CGG | 0.420771 | 8:-49605796 | None:intergenic |
ATTCTGGAAAATCTGAAGTT+GGG | 0.421868 | 8:-49605947 | None:intergenic |
TTATCGTTGACACTAAAGTT+GGG | 0.428962 | 8:+49605598 | MsG0880044816.01.T01:CDS |
AATTCTGGAAAATCTGAAGT+TGG | 0.433100 | 8:-49605948 | None:intergenic |
ATTATCAGAGTTTGCAGGAT+AGG | 0.455635 | 8:-49606047 | None:intergenic |
GTATCTCTTGGATTTGAATC+CGG | 0.457351 | 8:+49605467 | MsG0880044816.01.T01:CDS |
TGAATGTACCTCAGTCTCTC+TGG | 0.459482 | 8:+49605369 | MsG0880044816.01.T01:exon |
ATATGCTGCAAATTTAATAA+AGG | 0.461660 | 8:-49606264 | None:intergenic |
TGAATATTATCAGAGTTTGC+AGG | 0.462707 | 8:-49606052 | None:intergenic |
AGACACTTGGGAACACTTTG+AGG | 0.466473 | 8:-49606227 | None:intergenic |
ATTCTTCACCTGCATATGGA+TGG | 0.467974 | 8:+49606195 | MsG0880044816.01.T01:CDS |
TTTGCAGCTCGCAGGGCCAT+GGG | 0.468675 | 8:+49608411 | MsG0880044816.01.T01:intron |
TCTAGGACATTTAAATGAGC+TGG | 0.471859 | 8:+49606286 | MsG0880044816.01.T01:CDS |
GATCAGGCGTGTCTATTTCA+AGG | 0.473258 | 8:-49605626 | None:intergenic |
CCATGGGAGAATTGAAGAGC+AGG | 0.480095 | 8:+49608427 | MsG0880044816.01.T01:three_prime_UTR |
CAGAGATCAAGATAACTATA+GGG | 0.484698 | 8:-49608533 | None:intergenic |
ACTACTAGACATGTATCTCT+TGG | 0.487664 | 8:+49605455 | MsG0880044816.01.T01:CDS |
CAAACATTCATCCAAACATA+AGG | 0.490292 | 8:-49608649 | None:intergenic |
ATTCTACATGATGGACGAAC+CGG | 0.498936 | 8:+49606367 | MsG0880044816.01.T01:CDS |
AGGCTAAGGTACTTGAGATC+AGG | 0.500946 | 8:-49605642 | None:intergenic |
CAAATGTGATACAAGACACT+TGG | 0.504511 | 8:-49606240 | None:intergenic |
CAAAGCATTGTAACGAAGCA+TGG | 0.505102 | 8:-49608762 | None:intergenic |
GTTTAATTCCGGAGAGAGCT+CGG | 0.505622 | 8:-49605785 | None:intergenic |
AATCTCCTCCGAGCTCTCTC+CGG | 0.506677 | 8:+49605777 | MsG0880044816.01.T01:CDS |
ATTTCTCTTTGCAGCTCGCA+GGG | 0.508295 | 8:+49608404 | MsG0880044816.01.T01:intron |
AAGAGAGAAGAAAGAGCTCT+AGG | 0.509079 | 8:-49605986 | None:intergenic |
GGCCAAAGGTTCAGAAGTAA+AGG | 0.512790 | 8:-49605538 | None:intergenic |
GGGTGCCAACTTCCTTAAAG+AGG | 0.520722 | 8:+49605568 | MsG0880044816.01.T01:CDS |
TTGTAACATTGGTGAGGCTA+AGG | 0.522260 | 8:-49605656 | None:intergenic |
AACAGATTCACTTTCAGTAG+TGG | 0.531496 | 8:-49605742 | None:intergenic |
GAATAGGACTGCTGCCGAGA+AGG | 0.533329 | 8:+49608460 | MsG0880044816.01.T01:three_prime_UTR |
AGAATTGAAGAGCAGGAGCT+AGG | 0.533456 | 8:+49608434 | MsG0880044816.01.T01:three_prime_UTR |
GGACGAACCGGAGGAGTGGA+AGG | 0.536324 | 8:+49606379 | MsG0880044816.01.T01:CDS |
AATAGGACTGCTGCCGAGAA+GGG | 0.537065 | 8:+49608461 | MsG0880044816.01.T01:three_prime_UTR |
ACAGATTCACTTTCAGTAGT+GGG | 0.538943 | 8:-49605741 | None:intergenic |
CCTGCTCTTCAATTCTCCCA+TGG | 0.540230 | 8:-49608427 | None:intergenic |
TTTGTCACCCATCCATATGC+AGG | 0.552383 | 8:-49606203 | None:intergenic |
AGCAGGAGCTAGGAAAGAAT+AGG | 0.554573 | 8:+49608444 | MsG0880044816.01.T01:three_prime_UTR |
TATCGTTGACACTAAAGTTG+GGG | 0.556368 | 8:+49605599 | MsG0880044816.01.T01:CDS |
GCAGCACTTTCAATGACGGC+AGG | 0.556471 | 8:-49605431 | None:intergenic |
TGGCACATCGTCGATCCCCT+TGG | 0.560902 | 8:-49606419 | None:intergenic |
TTCTGGAAAATCTGAAGTTG+GGG | 0.575072 | 8:-49605946 | None:intergenic |
TGCATGGCTGATTGTAACAT+TGG | 0.576313 | 8:-49605667 | None:intergenic |
CCAGAAAGAAAGATATTCAC+CGG | 0.581901 | 8:-49605486 | None:intergenic |
TATTGATGGATTCTACATGA+TGG | 0.583523 | 8:+49606358 | MsG0880044816.01.T01:CDS |
TTCTTCACCTGCATATGGAT+GGG | 0.595592 | 8:+49606196 | MsG0880044816.01.T01:CDS |
GCTCGGAGGAGATTGAGTAA+AGG | 0.595653 | 8:-49605768 | None:intergenic |
AGTTGCAGCACTTTCAATGA+CGG | 0.598450 | 8:-49605435 | None:intergenic |
AAAGCATTGTAACGAAGCAT+GGG | 0.599421 | 8:-49608761 | None:intergenic |
TTTCCAGATCTTCGAGAACG+TGG | 0.599775 | 8:-49605512 | None:intergenic |
GCTGTTTAGTTCAACAACAA+AGG | 0.604630 | 8:+49605815 | MsG0880044816.01.T01:CDS |
TGATGGACGAACCGGAGGAG+TGG | 0.611046 | 8:+49606375 | MsG0880044816.01.T01:CDS |
AAATGTGATACAAGACACTT+GGG | 0.619822 | 8:-49606239 | None:intergenic |
GGCACCCGAAGTATGGCCAA+AGG | 0.649858 | 8:-49605552 | None:intergenic |
AGATATATCCAGAGAGACTG+AGG | 0.663217 | 8:-49605377 | None:intergenic |
AGTTTCCAATAGTTGCTGCA+TGG | 0.666899 | 8:-49605683 | None:intergenic |
TTCATTGAGATGTATCACAA+AGG | 0.669848 | 8:+49606450 | MsG0880044816.01.T01:exon |
CTACATGATGGACGAACCGG+AGG | 0.671169 | 8:+49606370 | MsG0880044816.01.T01:CDS |
GGCTGATTGTAACATTGGTG+AGG | 0.682471 | 8:-49605662 | None:intergenic |
TCTGATAATATTCAATGACA+AGG | 0.686714 | 8:+49606061 | MsG0880044816.01.T01:CDS |
GCAGGTGAAGAATCAAACGA+TGG | 0.688170 | 8:-49606185 | None:intergenic |
AAAATTTCTGATCTGCCAAG+GGG | 0.695820 | 8:+49606404 | MsG0880044816.01.T01:CDS |
TATTGGAAACTTGCACAACG+TGG | 0.700603 | 8:+49605695 | MsG0880044816.01.T01:CDS |
TAATTCCGGAGAGAGCTCGG+AGG | 0.748060 | 8:-49605782 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATTATATTATATTAT+TGG | + | Chr8:49606657-49606676 | MsG0880044816.01.T01:intron | 0.0% |
!! | AAAAATTATATTATATTATT+GGG | + | Chr8:49606658-49606677 | MsG0880044816.01.T01:intron | 0.0% |
!! | AAATAAAAATTGGATACTTT+GGG | - | Chr8:49607232-49607251 | None:intergenic | 15.0% |
!! | TAACTAGATCAAATAAAAAT+TGG | - | Chr8:49607242-49607261 | None:intergenic | 15.0% |
!! | TTAATAAATGATTATGTATC+TGG | - | Chr8:49606740-49606759 | None:intergenic | 15.0% |
!!! | AATTAAAAACATTTTGAGTA+AGG | + | Chr8:49607784-49607803 | MsG0880044816.01.T01:intron | 15.0% |
!! | AAAGAAATTTAGATACTTTG+GGG | - | Chr8:49606562-49606581 | None:intergenic | 20.0% |
!! | AATAAAAATTGGATACTTTG+GGG | - | Chr8:49607231-49607250 | None:intergenic | 20.0% |
!! | ACATAATATAGTTGAAAATG+TGG | - | Chr8:49607187-49607206 | None:intergenic | 20.0% |
!! | ATATGCTGCAAATTTAATAA+AGG | - | Chr8:49606267-49606286 | None:intergenic | 20.0% |
!! | CAAAGAAATTTAGATACTTT+GGG | - | Chr8:49606563-49606582 | None:intergenic | 20.0% |
!! | CAAATAAAAATTGGATACTT+TGG | - | Chr8:49607233-49607252 | None:intergenic | 20.0% |
!! | TAATCATAGATTAGATACAT+TGG | + | Chr8:49608373-49608392 | MsG0880044816.01.T01:intron | 20.0% |
!! | TACATTGAAATGATCTAAAT+TGG | + | Chr8:49607952-49607971 | MsG0880044816.01.T01:intron | 20.0% |
!! | TCAAAGAAATTTAGATACTT+TGG | - | Chr8:49606564-49606583 | None:intergenic | 20.0% |
!! | TTAGTTTACAATACCAAATT+TGG | + | Chr8:49607259-49607278 | MsG0880044816.01.T01:intron | 20.0% |
!!! | AATCCAAGTAAAATTTTGTT+TGG | + | Chr8:49607492-49607511 | MsG0880044816.01.T01:intron | 20.0% |
!!! | AGATAAACTTTTATCTTGTA+TGG | + | Chr8:49607614-49607633 | MsG0880044816.01.T01:intron | 20.0% |
!!! | ATTCCAAACAAAATTTTACT+TGG | - | Chr8:49607498-49607517 | None:intergenic | 20.0% |
!!! | GTAAAATTTTGTTTGGAATT+AGG | + | Chr8:49607499-49607518 | MsG0880044816.01.T01:intron | 20.0% |
!!! | GTTAGATATGTTTTTCAAAA+TGG | + | Chr8:49606314-49606333 | MsG0880044816.01.T01:CDS | 20.0% |
!!! | TAGTTTCAGTATTAGTATTT+TGG | + | Chr8:49608604-49608623 | MsG0880044816.01.T01:intron | 20.0% |
! | AAACTTAGTTTAGCATAGAA+GGG | - | Chr8:49607289-49607308 | None:intergenic | 25.0% |
! | AAGAAATTTAGATACTTTGG+GGG | - | Chr8:49606561-49606580 | None:intergenic | 25.0% |
! | AATTTATGTTGGGAATGTTA+AGG | - | Chr8:49606870-49606889 | None:intergenic | 25.0% |
! | ACCCATATGAAAATTTATGT+TGG | - | Chr8:49606881-49606900 | None:intergenic | 25.0% |
! | ATAAAAATTGGATACTTTGG+GGG | - | Chr8:49607230-49607249 | None:intergenic | 25.0% |
! | ATCACTAATACAAATGCAAA+TGG | - | Chr8:49607667-49607686 | None:intergenic | 25.0% |
! | ATTAAATTTGCAGCATATCT+AGG | + | Chr8:49606269-49606288 | MsG0880044816.01.T01:CDS | 25.0% |
! | ATTAGTCAGTTGTAAGTAAT+TGG | - | Chr8:49607475-49607494 | None:intergenic | 25.0% |
! | CAAAACATGATAACATCTTA+TGG | - | Chr8:49608509-49608528 | None:intergenic | 25.0% |
! | CATCTCAATGAAATTGAATT+TGG | - | Chr8:49606442-49606461 | None:intergenic | 25.0% |
! | CCCATATGAAAATTTATGTT+GGG | - | Chr8:49606880-49606899 | None:intergenic | 25.0% |
! | CTTAGGCATTATGTATAATA+AGG | + | Chr8:49608104-49608123 | MsG0880044816.01.T01:intron | 25.0% |
! | CTTTATAGTAACCTTATGTT+TGG | + | Chr8:49608638-49608657 | MsG0880044816.01.T01:three_prime_UTR | 25.0% |
! | TAAAGCAAATAACGAAATTC+TGG | - | Chr8:49605966-49605985 | None:intergenic | 25.0% |
! | TCAAACCTAATTGTATTTCT+AGG | - | Chr8:49606636-49606655 | None:intergenic | 25.0% |
! | TCTAAAGACAATTCAGTATT+TGG | - | Chr8:49608204-49608223 | None:intergenic | 25.0% |
! | TCTGATAATATTCAATGACA+AGG | + | Chr8:49606061-49606080 | MsG0880044816.01.T01:CDS | 25.0% |
! | TCTGTTATCTGACATAAAAA+GGG | - | Chr8:49608724-49608743 | None:intergenic | 25.0% |
! | TGGCAATTTAAATCAACATT+TGG | + | Chr8:49608074-49608093 | MsG0880044816.01.T01:intron | 25.0% |
! | TTCTGTAAAAAACTACATTG+TGG | + | Chr8:49607394-49607413 | MsG0880044816.01.T01:intron | 25.0% |
! | TTCTGTTATCTGACATAAAA+AGG | - | Chr8:49608725-49608744 | None:intergenic | 25.0% |
! | TTGCTACTCTAATCTATTAT+CGG | + | Chr8:49608312-49608331 | MsG0880044816.01.T01:intron | 25.0% |
!! | AACTTTTATCTTGTATGGTA+AGG | + | Chr8:49607619-49607638 | MsG0880044816.01.T01:intron | 25.0% |
!! | ACTTTTATCTTGTATGGTAA+GGG | + | Chr8:49607620-49607639 | MsG0880044816.01.T01:intron | 25.0% |
!! | AGGCAAAACATTATTCTTTT+TGG | + | Chr8:49607903-49607922 | MsG0880044816.01.T01:intron | 25.0% |
!! | CCCAACATAAATTTTCATAT+GGG | + | Chr8:49606877-49606896 | MsG0880044816.01.T01:intron | 25.0% |
!! | CTTTTGAATATTCAGCATTA+TGG | - | Chr8:49607596-49607615 | None:intergenic | 25.0% |
!! | GATAATTTTCAACCTCTTTA+AGG | - | Chr8:49605583-49605602 | None:intergenic | 25.0% |
!! | TAAGTAATTGGTTCATGATT+AGG | - | Chr8:49607463-49607482 | None:intergenic | 25.0% |
!! | TCCCAACATAAATTTTCATA+TGG | + | Chr8:49606876-49606895 | MsG0880044816.01.T01:intron | 25.0% |
!! | TGATAGATTTTTACACAGTT+TGG | - | Chr8:49606916-49606935 | None:intergenic | 25.0% |
!! | TTAAAGATTAAAAGCATGCT+TGG | + | Chr8:49607834-49607853 | MsG0880044816.01.T01:intron | 25.0% |
!! | TTTGTTTGGAATTAGGATTT+AGG | + | Chr8:49607506-49607525 | MsG0880044816.01.T01:intron | 25.0% |
!!! | ACAATGTAGTTTTTTACAGA+AGG | - | Chr8:49607395-49607414 | None:intergenic | 25.0% |
!!! | GATTTATTTTGAACGTGATT+TGG | + | Chr8:49605341-49605360 | MsG0880044816.01.T01:five_prime_UTR | 25.0% |
AAAAAATTTCTGATCTGCCA+AGG | + | Chr8:49606402-49606421 | MsG0880044816.01.T01:CDS | 30.0% | |
AAAAATTTCTGATCTGCCAA+GGG | + | Chr8:49606403-49606422 | MsG0880044816.01.T01:CDS | 30.0% | |
AAATGTGATACAAGACACTT+GGG | - | Chr8:49606242-49606261 | None:intergenic | 30.0% | |
AATACAAATGCAAATGGAAC+AGG | - | Chr8:49607661-49607680 | None:intergenic | 30.0% | |
ACAGAGATCAAGATAACTAT+AGG | - | Chr8:49608537-49608556 | None:intergenic | 30.0% | |
ACATTTATGAAATGACTGCA+AGG | - | Chr8:49607043-49607062 | None:intergenic | 30.0% | |
ACTAATAACAAGTAGGTCAA+GGG | - | Chr8:49607988-49608007 | None:intergenic | 30.0% | |
AGAAGCCTAGAAATACAATT+AGG | + | Chr8:49606628-49606647 | MsG0880044816.01.T01:intron | 30.0% | |
ATAATAAACACCAGAGTAGT+AGG | + | Chr8:49606787-49606806 | MsG0880044816.01.T01:intron | 30.0% | |
ATTATCGTTGACACTAAAGT+TGG | + | Chr8:49605597-49605616 | MsG0880044816.01.T01:CDS | 30.0% | |
CAAACATTCATCCAAACATA+AGG | - | Chr8:49608652-49608671 | None:intergenic | 30.0% | |
CAGAGATCAAGATAACTATA+GGG | - | Chr8:49608536-49608555 | None:intergenic | 30.0% | |
GAAACTTAGTTTAGCATAGA+AGG | - | Chr8:49607290-49607309 | None:intergenic | 30.0% | |
GTTAGATTAGAAAGTGAGTA+CGG | + | Chr8:49606982-49607001 | MsG0880044816.01.T01:intron | 30.0% | |
GTTTCAATTACAAGACTCTT+CGG | + | Chr8:49605401-49605420 | MsG0880044816.01.T01:CDS | 30.0% | |
TAGATAAAAATCTTCTCCGA+TGG | - | Chr8:49608236-49608255 | None:intergenic | 30.0% | |
TCTCAAGACTAATAACAAGT+AGG | - | Chr8:49607995-49608014 | None:intergenic | 30.0% | |
TGAATATTATCAGAGTTTGC+AGG | - | Chr8:49606055-49606074 | None:intergenic | 30.0% | |
TGATACACATTCTACAACTA+TGG | + | Chr8:49608274-49608293 | MsG0880044816.01.T01:intron | 30.0% | |
TTAGTGAGGAGTAAATATCA+AGG | + | Chr8:49607883-49607902 | MsG0880044816.01.T01:intron | 30.0% | |
TTATCGTTGACACTAAAGTT+GGG | + | Chr8:49605598-49605617 | MsG0880044816.01.T01:CDS | 30.0% | |
TTCATTGAGATGTATCACAA+AGG | + | Chr8:49606450-49606469 | MsG0880044816.01.T01:exon | 30.0% | |
TTGAAGACAATGCTTATTGA+TGG | + | Chr8:49606344-49606363 | MsG0880044816.01.T01:CDS | 30.0% | |
TTGAATATTCAGCATTATGG+AGG | - | Chr8:49607593-49607612 | None:intergenic | 30.0% | |
TTTCAATTACAAGACTCTTC+GGG | + | Chr8:49605402-49605421 | MsG0880044816.01.T01:CDS | 30.0% | |
! | AATTCTGGAAAATCTGAAGT+TGG | - | Chr8:49605951-49605970 | None:intergenic | 30.0% |
! | ATTCTGGAAAATCTGAAGTT+GGG | - | Chr8:49605950-49605969 | None:intergenic | 30.0% |
! | GATCTATCTCTAGAGAATTA+AGG | + | Chr8:49607688-49607707 | MsG0880044816.01.T01:intron | 30.0% |
!! | CATTACACAATGCTTGTTTT+AGG | + | Chr8:49607311-49607330 | MsG0880044816.01.T01:intron | 30.0% |
!! | CATTAGACAATGCTTGTTTT+AGG | + | Chr8:49607340-49607359 | MsG0880044816.01.T01:intron | 30.0% |
!! | GGATTTAGGATATACACTTT+TGG | + | Chr8:49607520-49607539 | MsG0880044816.01.T01:intron | 30.0% |
!! | TATTGATGGATTCTACATGA+TGG | + | Chr8:49606358-49606377 | MsG0880044816.01.T01:CDS | 30.0% |
!!! | AGGATATACACTTTTGGAAT+AGG | + | Chr8:49607526-49607545 | MsG0880044816.01.T01:intron | 30.0% |
AAAATTTCTGATCTGCCAAG+GGG | + | Chr8:49606404-49606423 | MsG0880044816.01.T01:CDS | 35.0% | |
AACACGAGCAAAAAATTTGG+TGG | - | Chr8:49606519-49606538 | None:intergenic | 35.0% | |
AACAGATTCACTTTCAGTAG+TGG | - | Chr8:49605745-49605764 | None:intergenic | 35.0% | |
AAGCATGATTCACCCATTTA+AGG | + | Chr8:49608015-49608034 | MsG0880044816.01.T01:intron | 35.0% | |
ACAAGGGACATATTGAAGTT+TGG | - | Chr8:49607136-49607155 | None:intergenic | 35.0% | |
ACAGATTCACTTTCAGTAGT+GGG | - | Chr8:49605744-49605763 | None:intergenic | 35.0% | |
ACATGCATGTGATCAAACAA+GGG | - | Chr8:49607152-49607171 | None:intergenic | 35.0% | |
ACTACTAGACATGTATCTCT+TGG | + | Chr8:49605455-49605474 | MsG0880044816.01.T01:CDS | 35.0% | |
ATAGAAGGGAAGTCCAAATT+TGG | - | Chr8:49607275-49607294 | None:intergenic | 35.0% | |
ATTATCAGAGTTTGCAGGAT+AGG | - | Chr8:49606050-49606069 | None:intergenic | 35.0% | |
CAAAAATACAGAACCCTTCT+CGG | - | Chr8:49608477-49608496 | None:intergenic | 35.0% | |
CAAATGTGATACAAGACACT+TGG | - | Chr8:49606243-49606262 | None:intergenic | 35.0% | |
CCAGAAAGAAAGATATTCAC+CGG | - | Chr8:49605489-49605508 | None:intergenic | 35.0% | |
GACTAATAACAAGTAGGTCA+AGG | - | Chr8:49607989-49608008 | None:intergenic | 35.0% | |
GGAAATCACAAAATCAGAAG+AGG | - | Chr8:49607115-49607134 | None:intergenic | 35.0% | |
GTATCTCTTGGATTTGAATC+CGG | + | Chr8:49605467-49605486 | MsG0880044816.01.T01:CDS | 35.0% | |
TATCGTTGACACTAAAGTTG+GGG | + | Chr8:49605599-49605618 | MsG0880044816.01.T01:CDS | 35.0% | |
TCACAAAATCAGAAGAGGAA+AGG | - | Chr8:49607110-49607129 | None:intergenic | 35.0% | |
TCCAACACGAGCAAAAAATT+TGG | - | Chr8:49606522-49606541 | None:intergenic | 35.0% | |
TGTTGCAGGACATCAATAAA+GGG | + | Chr8:49607753-49607772 | MsG0880044816.01.T01:intron | 35.0% | |
TTTCTAACTTCCTACTACTC+TGG | - | Chr8:49606800-49606819 | None:intergenic | 35.0% | |
TTTGATTCTTCACCTGCATA+TGG | + | Chr8:49606191-49606210 | MsG0880044816.01.T01:CDS | 35.0% | |
! | AGATTAAAAGCATGCTTGGA+TGG | + | Chr8:49607838-49607857 | MsG0880044816.01.T01:intron | 35.0% |
! | ATTTAGATACTTTGGGGGTA+TGG | - | Chr8:49606556-49606575 | None:intergenic | 35.0% |
! | GCTAGTTTAAATAGTGCTTC+AGG | + | Chr8:49608046-49608065 | MsG0880044816.01.T01:intron | 35.0% |
! | GCTGTTTAGTTCAACAACAA+AGG | + | Chr8:49605815-49605834 | MsG0880044816.01.T01:CDS | 35.0% |
! | GGATGTGTTATCAGTTTTAC+TGG | + | Chr8:49607924-49607943 | MsG0880044816.01.T01:intron | 35.0% |
! | TCTAGGACATTTAAATGAGC+TGG | + | Chr8:49606286-49606305 | MsG0880044816.01.T01:CDS | 35.0% |
! | TCTAGGCTTCTTTTGAACAT+AGG | - | Chr8:49606619-49606638 | None:intergenic | 35.0% |
! | TTCAACCTCTTTAAGGAAGT+TGG | - | Chr8:49605576-49605595 | None:intergenic | 35.0% |
! | TTCTGGAAAATCTGAAGTTG+GGG | - | Chr8:49605949-49605968 | None:intergenic | 35.0% |
!! | TAGCTCTAGCAACCTTAAAT+GGG | - | Chr8:49608030-49608049 | None:intergenic | 35.0% |
!! | TTTTGAGTAAGGTCGACTAT+AGG | + | Chr8:49607795-49607814 | MsG0880044816.01.T01:intron | 35.0% |
!!! | ACCAAATTTTTTGCTCGTGT+TGG | + | Chr8:49606518-49606537 | MsG0880044816.01.T01:intron | 35.0% |
!!! | GAGACTTTTAAAACTGTTGC+AGG | + | Chr8:49607739-49607758 | MsG0880044816.01.T01:intron | 35.0% |
AAATAGTGCTTCAGGCTTGA+TGG | + | Chr8:49608054-49608073 | MsG0880044816.01.T01:intron | 40.0% | |
AAGAGAGAAGAAAGAGCTCT+AGG | - | Chr8:49605989-49606008 | None:intergenic | 40.0% | |
AAGTAGGTCAAGGGTAAAGA+TGG | - | Chr8:49607979-49607998 | None:intergenic | 40.0% | |
AATCAAACGATGGATCCATC+TGG | - | Chr8:49606178-49606197 | None:intergenic | 40.0% | |
AATGCAAATGGAACAGGTTC+TGG | - | Chr8:49607655-49607674 | None:intergenic | 40.0% | |
AGATATATCCAGAGAGACTG+AGG | - | Chr8:49605380-49605399 | None:intergenic | 40.0% | |
AGTTGCAGCACTTTCAATGA+CGG | - | Chr8:49605438-49605457 | None:intergenic | 40.0% | |
AGTTTCCAATAGTTGCTGCA+TGG | - | Chr8:49605686-49605705 | None:intergenic | 40.0% | |
ATGTGGATGGAATGTTAGTG+AGG | + | Chr8:49607869-49607888 | MsG0880044816.01.T01:intron | 40.0% | |
ATTCTTCACCTGCATATGGA+TGG | + | Chr8:49606195-49606214 | MsG0880044816.01.T01:CDS | 40.0% | |
CAGCTCGAGATGTTTAATTC+CGG | - | Chr8:49605799-49605818 | None:intergenic | 40.0% | |
CCGGTGAATATCTTTCTTTC+TGG | + | Chr8:49605486-49605505 | MsG0880044816.01.T01:CDS | 40.0% | |
CTGTTGCAGGACATCAATAA+AGG | + | Chr8:49607752-49607771 | MsG0880044816.01.T01:intron | 40.0% | |
GACATGCATGTGATCAAACA+AGG | - | Chr8:49607153-49607172 | None:intergenic | 40.0% | |
GACCTTTACTTCTGAACCTT+TGG | + | Chr8:49605536-49605555 | MsG0880044816.01.T01:CDS | 40.0% | |
GTTGCAGGACATCAATAAAG+GGG | + | Chr8:49607754-49607773 | MsG0880044816.01.T01:intron | 40.0% | |
TAAGGTGTAGTTCATAGCCA+GGG | + | Chr8:49607706-49607725 | MsG0880044816.01.T01:intron | 40.0% | |
TATTGGAAACTTGCACAACG+TGG | + | Chr8:49605695-49605714 | MsG0880044816.01.T01:CDS | 40.0% | |
TGCATGGCTGATTGTAACAT+TGG | - | Chr8:49605670-49605689 | None:intergenic | 40.0% | |
TTAAGGTGTAGTTCATAGCC+AGG | + | Chr8:49607705-49607724 | MsG0880044816.01.T01:intron | 40.0% | |
TTCTTCACCTGCATATGGAT+GGG | + | Chr8:49606196-49606215 | MsG0880044816.01.T01:CDS | 40.0% | |
TTGCAGGACATCAATAAAGG+GGG | + | Chr8:49607755-49607774 | MsG0880044816.01.T01:intron | 40.0% | |
TTGTAACATTGGTGAGGCTA+AGG | - | Chr8:49605659-49605678 | None:intergenic | 40.0% | |
! | AATTGGATACTTTGGGGGTA+TGG | - | Chr8:49607225-49607244 | None:intergenic | 40.0% |
! | CAACATTTGGAACTGAGCTT+AGG | + | Chr8:49608087-49608106 | MsG0880044816.01.T01:intron | 40.0% |
! | CGAGAAGGGTTCTGTATTTT+TGG | + | Chr8:49608475-49608494 | MsG0880044816.01.T01:three_prime_UTR | 40.0% |
! | CTGCTGCATTTTCATCAGTT+AGG | + | Chr8:49608145-49608164 | MsG0880044816.01.T01:intron | 40.0% |
!! | ATTCTACATGATGGACGAAC+CGG | + | Chr8:49606367-49606386 | MsG0880044816.01.T01:CDS | 40.0% |
!! | CTAGCTCTAGCAACCTTAAA+TGG | - | Chr8:49608031-49608050 | None:intergenic | 40.0% |
!! | CTTTAGAAGCACTGTACCAT+CGG | + | Chr8:49608217-49608236 | MsG0880044816.01.T01:intron | 40.0% |
!!! | ATTTTTTCCTTCCACTCCTC+CGG | - | Chr8:49606389-49606408 | None:intergenic | 40.0% |
AGAATTGAAGAGCAGGAGCT+AGG | + | Chr8:49608434-49608453 | MsG0880044816.01.T01:three_prime_UTR | 45.0% | |
AGACACTTGGGAACACTTTG+AGG | - | Chr8:49606230-49606249 | None:intergenic | 45.0% | |
AGCAGGAGCTAGGAAAGAAT+AGG | + | Chr8:49608444-49608463 | MsG0880044816.01.T01:three_prime_UTR | 45.0% | |
AGGACATCAATAAAGGGGGT+AGG | + | Chr8:49607759-49607778 | MsG0880044816.01.T01:intron | 45.0% | |
ATCAGCCATGCAGCAACTAT+TGG | + | Chr8:49605678-49605697 | MsG0880044816.01.T01:CDS | 45.0% | |
ATGGATCCATCTGGCAACAA+GGG | - | Chr8:49606169-49606188 | None:intergenic | 45.0% | |
ATTTCTCTTTGCAGCTCGCA+GGG | + | Chr8:49608404-49608423 | MsG0880044816.01.T01:intron | 45.0% | |
CGAAGCATGAGAAACTCACA+AGG | - | Chr8:49607077-49607096 | None:intergenic | 45.0% | |
CTGAACCTTTGGCCATACTT+CGG | + | Chr8:49605547-49605566 | MsG0880044816.01.T01:CDS | 45.0% | |
CTGTTGTCATGTACTTGCAG+TGG | + | Chr8:49605913-49605932 | MsG0880044816.01.T01:intron | 45.0% | |
CTTGGATGGCATAACACATG+TGG | + | Chr8:49607852-49607871 | MsG0880044816.01.T01:intron | 45.0% | |
GATCACATGCATGTCACTAG+TGG | + | Chr8:49607158-49607177 | MsG0880044816.01.T01:intron | 45.0% | |
GATCAGGCGTGTCTATTTCA+AGG | - | Chr8:49605629-49605648 | None:intergenic | 45.0% | |
GATGGCATAACACATGTGGA+TGG | + | Chr8:49607856-49607875 | MsG0880044816.01.T01:intron | 45.0% | |
GCAGGTGAAGAATCAAACGA+TGG | - | Chr8:49606188-49606207 | None:intergenic | 45.0% | |
GGACATCAATAAAGGGGGTA+GGG | + | Chr8:49607760-49607779 | MsG0880044816.01.T01:intron | 45.0% | |
GGCCAAAGGTTCAGAAGTAA+AGG | - | Chr8:49605541-49605560 | None:intergenic | 45.0% | |
GGCTGATTGTAACATTGGTG+AGG | - | Chr8:49605665-49605684 | None:intergenic | 45.0% | |
GTTTAATTCCGGAGAGAGCT+CGG | - | Chr8:49605788-49605807 | None:intergenic | 45.0% | |
TAGTTCATAGCCAGGGCAAT+TGG | + | Chr8:49607713-49607732 | MsG0880044816.01.T01:intron | 45.0% | |
TGAACCTTTGGCCATACTTC+GGG | + | Chr8:49605548-49605567 | MsG0880044816.01.T01:CDS | 45.0% | |
TGAATGTACCTCAGTCTCTC+TGG | + | Chr8:49605369-49605388 | MsG0880044816.01.T01:exon | 45.0% | |
TTTCCAGATCTTCGAGAACG+TGG | - | Chr8:49605515-49605534 | None:intergenic | 45.0% | |
TTTGTCACCCATCCATATGC+AGG | - | Chr8:49606206-49606225 | None:intergenic | 45.0% | |
! | AGGCTAAGGTACTTGAGATC+AGG | - | Chr8:49605645-49605664 | None:intergenic | 45.0% |
!! | GTGCTGTGATTTGCTGTTGA+TGG | + | Chr8:49608688-49608707 | MsG0880044816.01.T01:three_prime_UTR | 45.0% |
AATAGGACTGCTGCCGAGAA+GGG | + | Chr8:49608461-49608480 | MsG0880044816.01.T01:three_prime_UTR | 50.0% | |
CATTTCTCTTTGCAGCTCGC+AGG | + | Chr8:49608403-49608422 | MsG0880044816.01.T01:intron | 50.0% | |
CCATGGGAGAATTGAAGAGC+AGG | + | Chr8:49608427-49608446 | MsG0880044816.01.T01:three_prime_UTR | 50.0% | |
CCTGCTCTTCAATTCTCCCA+TGG | - | Chr8:49608430-49608449 | None:intergenic | 50.0% | |
GATGGATCCATCTGGCAACA+AGG | - | Chr8:49606170-49606189 | None:intergenic | 50.0% | |
GCTCGGAGGAGATTGAGTAA+AGG | - | Chr8:49605771-49605790 | None:intergenic | 50.0% | |
GGGTGCCAACTTCCTTAAAG+AGG | + | Chr8:49605568-49605587 | MsG0880044816.01.T01:CDS | 50.0% | |
TGGATCCATCTGGCAACAAG+GGG | - | Chr8:49606168-49606187 | None:intergenic | 50.0% | |
AAGGTCGACTATAGGCAGCG+AGG | + | Chr8:49607803-49607822 | MsG0880044816.01.T01:intron | 55.0% | |
AAGTCTCACGCCAATTGCCC+TGG | - | Chr8:49607726-49607745 | None:intergenic | 55.0% | |
AATCTCCTCCGAGCTCTCTC+CGG | + | Chr8:49605777-49605796 | MsG0880044816.01.T01:CDS | 55.0% | |
AGTTGCCCCTTGTTGCCAGA+TGG | + | Chr8:49606160-49606179 | MsG0880044816.01.T01:intron | 55.0% | |
CTGCCACGTTCTCGAAGATC+TGG | + | Chr8:49605509-49605528 | MsG0880044816.01.T01:CDS | 55.0% | |
GAATAGGACTGCTGCCGAGA+AGG | + | Chr8:49608460-49608479 | MsG0880044816.01.T01:three_prime_UTR | 55.0% | |
GCAGCACTTTCAATGACGGC+AGG | - | Chr8:49605434-49605453 | None:intergenic | 55.0% | |
GGAAGTTGGCACCCGAAGTA+TGG | - | Chr8:49605562-49605581 | None:intergenic | 55.0% | |
TAATTCCGGAGAGAGCTCGG+AGG | - | Chr8:49605785-49605804 | None:intergenic | 55.0% | |
!! | CTACATGATGGACGAACCGG+AGG | + | Chr8:49606370-49606389 | MsG0880044816.01.T01:CDS | 55.0% |
GGCACCCGAAGTATGGCCAA+AGG | - | Chr8:49605555-49605574 | None:intergenic | 60.0% | |
TGGCACATCGTCGATCCCCT+TGG | - | Chr8:49606422-49606441 | None:intergenic | 60.0% | |
TTTGCAGCTCGCAGGGCCAT+GGG | + | Chr8:49608411-49608430 | MsG0880044816.01.T01:intron | 60.0% | |
! | TGATGGACGAACCGGAGGAG+TGG | + | Chr8:49606375-49606394 | MsG0880044816.01.T01:CDS | 60.0% |
CTTTGCAGCTCGCAGGGCCA+TGG | + | Chr8:49608410-49608429 | MsG0880044816.01.T01:intron | 65.0% | |
GGACGAACCGGAGGAGTGGA+AGG | + | Chr8:49606379-49606398 | MsG0880044816.01.T01:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 49605313 | 49608772 | 49605313 | ID=MsG0880044816.01;Name=MsG0880044816.01 |
Chr8 | mRNA | 49605313 | 49608772 | 49605313 | ID=MsG0880044816.01.T01;Parent=MsG0880044816.01;Name=MsG0880044816.01.T01;_AED=0.46;_eAED=0.46;_QI=59|1|1|1|0.5|0.4|5|336|297 |
Chr8 | exon | 49605313 | 49605836 | 49605313 | ID=MsG0880044816.01.T01:exon:20636;Parent=MsG0880044816.01.T01 |
Chr8 | exon | 49605933 | 49606082 | 49605933 | ID=MsG0880044816.01.T01:exon:20637;Parent=MsG0880044816.01.T01 |
Chr8 | exon | 49606179 | 49606471 | 49606179 | ID=MsG0880044816.01.T01:exon:20638;Parent=MsG0880044816.01.T01 |
Chr8 | exon | 49608418 | 49608585 | 49608418 | ID=MsG0880044816.01.T01:exon:20639;Parent=MsG0880044816.01.T01 |
Chr8 | exon | 49608619 | 49608772 | 49608619 | ID=MsG0880044816.01.T01:exon:20640;Parent=MsG0880044816.01.T01 |
Chr8 | five_prime_UTR | 49605313 | 49605371 | 49605313 | ID=MsG0880044816.01.T01:five_prime_utr;Parent=MsG0880044816.01.T01 |
Chr8 | CDS | 49605372 | 49605836 | 49605372 | ID=MsG0880044816.01.T01:cds;Parent=MsG0880044816.01.T01 |
Chr8 | CDS | 49605933 | 49606082 | 49605933 | ID=MsG0880044816.01.T01:cds;Parent=MsG0880044816.01.T01 |
Chr8 | CDS | 49606179 | 49606457 | 49606179 | ID=MsG0880044816.01.T01:cds;Parent=MsG0880044816.01.T01 |
Chr8 | three_prime_UTR | 49606458 | 49606471 | 49606458 | ID=MsG0880044816.01.T01:three_prime_utr;Parent=MsG0880044816.01.T01 |
Chr8 | three_prime_UTR | 49608418 | 49608585 | 49608418 | ID=MsG0880044816.01.T01:three_prime_utr;Parent=MsG0880044816.01.T01 |
Chr8 | three_prime_UTR | 49608619 | 49608772 | 49608619 | ID=MsG0880044816.01.T01:three_prime_utr;Parent=MsG0880044816.01.T01 |
Gene Sequence |
Protein sequence |