Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044751.01.T01 | AET03065.1 | 50.919 | 381 | 153 | 11 | 1 | 353 | 1 | 375 | 1.70E-105 | 328 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044751.01.T01 | Q9M190 | 28.75 | 240 | 140 | 9 | 27 | 250 | 1 | 225 | 9.72E-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044751.01.T01 | G7LEM0 | 50.919 | 381 | 153 | 11 | 1 | 353 | 1 | 375 | 8.12e-106 | 328 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044751.01.T01 | MTR_8g062300 | 50.919 | 381 | 153 | 11 | 1 | 353 | 1 | 375 | 2.06e-109 | 328 |
| MsG0880044751.01.T01 | MTR_8g062080 | 51.282 | 351 | 133 | 10 | 23 | 358 | 21 | 348 | 9.57e-97 | 295 |
| MsG0880044751.01.T01 | MTR_8g062310 | 46.742 | 353 | 150 | 8 | 5 | 353 | 8 | 326 | 8.94e-95 | 289 |
| MsG0880044751.01.T01 | MTR_8g062010 | 50.291 | 344 | 136 | 11 | 23 | 353 | 7 | 328 | 9.99e-92 | 281 |
| MsG0880044751.01.T01 | MTR_8g070950 | 47.861 | 374 | 134 | 13 | 1 | 351 | 1 | 336 | 6.43e-88 | 272 |
| MsG0880044751.01.T01 | MTR_4g050250 | 43.325 | 397 | 155 | 13 | 1 | 353 | 1 | 371 | 7.14e-86 | 266 |
| MsG0880044751.01.T01 | MTR_8g469020 | 41.304 | 368 | 156 | 9 | 23 | 353 | 5 | 349 | 5.09e-76 | 241 |
| MsG0880044751.01.T01 | MTR_8g058965 | 42.636 | 387 | 156 | 11 | 7 | 357 | 2 | 358 | 1.69e-75 | 240 |
| MsG0880044751.01.T01 | MTR_8g467790 | 40.443 | 361 | 132 | 12 | 24 | 357 | 147 | 451 | 3.75e-68 | 223 |
| MsG0880044751.01.T01 | MTR_8g468810 | 36.148 | 379 | 175 | 12 | 1 | 342 | 1 | 349 | 2.12e-53 | 181 |
| MsG0880044751.01.T01 | MTR_8g468810 | 36.898 | 374 | 179 | 14 | 1 | 342 | 1 | 349 | 2.48e-52 | 180 |
| MsG0880044751.01.T01 | MTR_2g086020 | 61.184 | 152 | 56 | 2 | 51 | 201 | 1 | 150 | 9.62e-51 | 172 |
| MsG0880044751.01.T01 | MTR_8g468810 | 38.245 | 319 | 145 | 9 | 1 | 287 | 1 | 299 | 1.00e-50 | 172 |
| MsG0880044751.01.T01 | MTR_8g468810 | 38.245 | 319 | 145 | 9 | 1 | 287 | 1 | 299 | 1.14e-50 | 172 |
| MsG0880044751.01.T01 | MTR_8g468810 | 38.245 | 319 | 145 | 9 | 1 | 287 | 1 | 299 | 3.25e-50 | 172 |
| MsG0880044751.01.T01 | MTR_2g083840 | 36.443 | 343 | 173 | 12 | 21 | 339 | 17 | 338 | 5.02e-47 | 166 |
| MsG0880044751.01.T01 | MTR_8g062270 | 35.457 | 361 | 179 | 14 | 23 | 353 | 14 | 350 | 2.83e-43 | 155 |
| MsG0880044751.01.T01 | MTR_4g032730 | 33.699 | 365 | 196 | 13 | 12 | 353 | 3 | 344 | 4.75e-41 | 150 |
| MsG0880044751.01.T01 | MTR_8g058970 | 36.585 | 328 | 153 | 14 | 1 | 287 | 1 | 314 | 3.62e-40 | 148 |
| MsG0880044751.01.T01 | MTR_8g467800 | 33.333 | 372 | 201 | 12 | 2 | 353 | 3 | 347 | 9.67e-37 | 138 |
| MsG0880044751.01.T01 | MTR_5g092960 | 33.508 | 382 | 191 | 14 | 7 | 353 | 6 | 359 | 1.06e-35 | 134 |
| MsG0880044751.01.T01 | MTR_5g092960 | 33.508 | 382 | 191 | 14 | 7 | 353 | 6 | 359 | 3.05e-35 | 134 |
| MsG0880044751.01.T01 | MTR_8g468840 | 36.338 | 355 | 179 | 15 | 25 | 353 | 14 | 347 | 1.33e-34 | 132 |
| MsG0880044751.01.T01 | MTR_8g445780 | 33.152 | 368 | 193 | 15 | 7 | 353 | 2 | 337 | 1.50e-33 | 128 |
| MsG0880044751.01.T01 | MTR_8g468760 | 37.011 | 281 | 133 | 12 | 21 | 270 | 5 | 272 | 5.73e-33 | 127 |
| MsG0880044751.01.T01 | MTR_8g467800 | 33.645 | 321 | 172 | 11 | 2 | 302 | 3 | 302 | 6.62e-31 | 120 |
| MsG0880044751.01.T01 | MTR_8g014260 | 32.320 | 362 | 186 | 20 | 25 | 353 | 16 | 351 | 6.09e-26 | 108 |
| MsG0880044751.01.T01 | MTR_8g014160 | 31.627 | 332 | 177 | 16 | 16 | 318 | 32 | 342 | 3.31e-25 | 105 |
| MsG0880044751.01.T01 | MTR_8g077460 | 35.426 | 223 | 117 | 12 | 25 | 231 | 10 | 221 | 2.97e-18 | 85.5 |
| MsG0880044751.01.T01 | MTR_5g021550 | 39.490 | 157 | 64 | 9 | 25 | 163 | 19 | 162 | 1.09e-17 | 79.7 |
| MsG0880044751.01.T01 | MTR_7g056447 | 33.333 | 189 | 114 | 6 | 20 | 206 | 4 | 182 | 8.04e-16 | 77.4 |
| MsG0880044751.01.T01 | MTR_8g014290 | 36.478 | 159 | 74 | 7 | 25 | 164 | 10 | 160 | 1.87e-15 | 73.6 |
| MsG0880044751.01.T01 | MTR_4g024720 | 35.664 | 143 | 69 | 7 | 1 | 135 | 1 | 128 | 9.34e-14 | 70.1 |
| MsG0880044751.01.T01 | MTR_7g034110 | 31.132 | 212 | 120 | 7 | 24 | 223 | 10 | 207 | 2.20e-12 | 67.8 |
| MsG0880044751.01.T01 | MTR_1g041245 | 32.487 | 197 | 115 | 8 | 23 | 213 | 9 | 193 | 5.38e-12 | 67.0 |
| MsG0880044751.01.T01 | MTR_7g115270 | 32.857 | 210 | 111 | 10 | 25 | 218 | 12 | 207 | 7.52e-12 | 66.6 |
| MsG0880044751.01.T01 | MTR_3g107100 | 32.227 | 211 | 117 | 12 | 25 | 224 | 11 | 206 | 8.48e-12 | 66.2 |
| MsG0880044751.01.T01 | MTR_6g044560 | 25.991 | 227 | 124 | 8 | 20 | 213 | 173 | 388 | 1.32e-11 | 66.2 |
| MsG0880044751.01.T01 | MTR_2g007500 | 32.512 | 203 | 98 | 8 | 23 | 213 | 12 | 187 | 2.24e-11 | 64.7 |
| MsG0880044751.01.T01 | MTR_3g107160 | 30.876 | 217 | 131 | 10 | 25 | 232 | 10 | 216 | 3.72e-11 | 64.3 |
| MsG0880044751.01.T01 | MTR_7g032380 | 32.683 | 205 | 104 | 10 | 23 | 213 | 9 | 193 | 4.47e-11 | 63.9 |
| MsG0880044751.01.T01 | MTR_6g044572 | 26.009 | 223 | 121 | 8 | 24 | 213 | 1 | 212 | 5.13e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880044751.01.T01 | AT2G26860 | 31.844 | 179 | 95 | 9 | 24 | 190 | 1 | 164 | 2.54e-12 | 68.2 |
| MsG0880044751.01.T01 | AT2G26860 | 31.844 | 179 | 95 | 9 | 24 | 190 | 1 | 164 | 2.54e-12 | 68.2 |
| MsG0880044751.01.T01 | AT1G78760 | 30.481 | 187 | 108 | 8 | 15 | 193 | 2 | 174 | 3.48e-12 | 67.8 |
| MsG0880044751.01.T01 | AT3G42770 | 28.750 | 240 | 140 | 9 | 27 | 250 | 1 | 225 | 9.91e-12 | 66.6 |
| MsG0880044751.01.T01 | AT5G41840 | 29.464 | 224 | 106 | 9 | 19 | 211 | 8 | 210 | 1.37e-11 | 66.2 |
| MsG0880044751.01.T01 | AT4G13965 | 26.316 | 304 | 194 | 11 | 18 | 306 | 5 | 293 | 3.08e-11 | 64.7 |
| MsG0880044751.01.T01 | AT4G26340 | 26.978 | 278 | 165 | 10 | 24 | 279 | 1 | 262 | 3.49e-11 | 64.7 |
| MsG0880044751.01.T01 | AT4G10400 | 27.273 | 187 | 112 | 6 | 24 | 205 | 1 | 168 | 4.83e-11 | 63.9 |
| MsG0880044751.01.T01 | AT4G10400 | 27.273 | 187 | 112 | 6 | 24 | 205 | 1 | 168 | 4.83e-11 | 63.9 |
| MsG0880044751.01.T01 | AT4G10400 | 27.273 | 187 | 112 | 6 | 24 | 205 | 1 | 168 | 4.83e-11 | 63.9 |
| MsG0880044751.01.T01 | AT3G59200 | 31.068 | 206 | 110 | 11 | 22 | 211 | 4 | 193 | 7.45e-11 | 63.2 |
Find 76 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAAAGGATCTATCAATT+TGG | 0.184497 | 8:+48695651 | MsG0880044751.01.T01:CDS |
| AAGTAAACCTGCAAAGTTTC+CGG | 0.223760 | 8:-48695532 | None:intergenic |
| CCTGCAAAGTTTCCGGGTTT+GGG | 0.246077 | 8:-48695525 | None:intergenic |
| CTTTGGTCACAAAGTCTTTA+GGG | 0.250661 | 8:-48695564 | None:intergenic |
| ACCTGCAAAGTTTCCGGGTT+TGG | 0.261309 | 8:-48695526 | None:intergenic |
| ACTTTGGTCACAAAGTCTTT+AGG | 0.271219 | 8:-48695565 | None:intergenic |
| TGAAAACACTGCAGTCTTTA+CGG | 0.274242 | 8:+48695388 | MsG0880044751.01.T01:intron |
| CCCAAACCCGGAAACTTTGC+AGG | 0.276984 | 8:+48695525 | MsG0880044751.01.T01:CDS |
| CTCACAGATATCTTCATCTT+TGG | 0.289102 | 8:+48694321 | MsG0880044751.01.T01:CDS |
| TGATGTAAATCACGAAATTC+AGG | 0.328876 | 8:-48695977 | None:intergenic |
| GTAACTCACTATTGTCATTT+CGG | 0.343521 | 8:-48695768 | None:intergenic |
| AGTAAACCTGCAAAGTTTCC+GGG | 0.354724 | 8:-48695531 | None:intergenic |
| ATGTTTCAACTCAAATCTTC+TGG | 0.358687 | 8:+48696018 | MsG0880044751.01.T01:CDS |
| TTCGGATGAGGTTGAGAATA+GGG | 0.359178 | 8:-48695750 | None:intergenic |
| AACAAAGGATCTATCAATTT+GGG | 0.359846 | 8:+48695652 | MsG0880044751.01.T01:CDS |
| TCACTGAAGAAGCTGGAAAT+TGG | 0.372767 | 8:+48695454 | MsG0880044751.01.T01:CDS |
| TGTTGGCAACTTTCACAGTA+TGG | 0.380596 | 8:+48695678 | MsG0880044751.01.T01:CDS |
| TATCACCTTCTTCATATTTG+AGG | 0.384087 | 8:-48695801 | None:intergenic |
| TCTATCAATTTGGGTATTGT+TGG | 0.395338 | 8:+48695661 | MsG0880044751.01.T01:CDS |
| TCGACAAATTTACTTTCAAC+CGG | 0.395833 | 8:-48695727 | None:intergenic |
| AGATCCTTTGTTTATAAAGT+AGG | 0.401538 | 8:-48695641 | None:intergenic |
| TTTGAATGTCGCGGGATTTG+CGG | 0.402806 | 8:-48694430 | None:intergenic |
| GAAATAGTTTACTTTCTGTC+TGG | 0.412164 | 8:+48695499 | MsG0880044751.01.T01:CDS |
| TCATCTTTGGAAGGATCTCC+AGG | 0.432896 | 8:+48694334 | MsG0880044751.01.T01:CDS |
| ACATGGATCCTTGCTTCCAT+TGG | 0.435999 | 8:+48694533 | MsG0880044751.01.T01:CDS |
| CACTATTGTCATTTCGGATG+AGG | 0.436761 | 8:-48695762 | None:intergenic |
| ATATGACATATCAGCGAGTC+TGG | 0.443386 | 8:-48694248 | None:intergenic |
| GTCATTGACTGTTTCAGAGC+TGG | 0.463236 | 8:-48695605 | None:intergenic |
| AGAATTGACTTGAGATTGAA+AGG | 0.470631 | 8:-48694504 | None:intergenic |
| TTTCGGATGAGGTTGAGAAT+AGG | 0.478122 | 8:-48695751 | None:intergenic |
| ATTTCCAGCTTCTTCAGTGA+TGG | 0.484197 | 8:-48695451 | None:intergenic |
| CAAAGTTGGAACGACAACTT+TGG | 0.500383 | 8:-48695581 | None:intergenic |
| GTTTCAGAGCTGGACAAAGT+TGG | 0.502883 | 8:-48695595 | None:intergenic |
| GATGGAAAATGAACAGAAGA+AGG | 0.507493 | 8:-48695433 | None:intergenic |
| TCACTAACGTCGCCGTCGAC+AGG | 0.515211 | 8:+48694213 | MsG0880044751.01.T01:CDS |
| GCATTGAGAAAGAAGGAAGC+CGG | 0.516507 | 8:-48694605 | None:intergenic |
| GGTTTCACCTCGATATCGAT+TGG | 0.518686 | 8:-48695412 | None:intergenic |
| CATTGAGAAAGAAGGAAGCC+GGG | 0.523422 | 8:-48694604 | None:intergenic |
| TCGATCAATTCCGTTCAGAA+AGG | 0.524548 | 8:+48694376 | MsG0880044751.01.T01:CDS |
| CTGCAAAGTTTCCGGGTTTG+GGG | 0.527570 | 8:-48695524 | None:intergenic |
| TTGTTGAAGTTGAGGTCCAA+TGG | 0.530996 | 8:-48694549 | None:intergenic |
| ATTAGTAGCATTGAGAAAGA+AGG | 0.531577 | 8:-48694612 | None:intergenic |
| CGACAAATTTACTTTCAACC+GGG | 0.533393 | 8:-48695726 | None:intergenic |
| TCTGTCTGGCTCCCCAAACC+CGG | 0.538240 | 8:+48695513 | MsG0880044751.01.T01:CDS |
| CTACTAATATCGTTTGCCTC+AGG | 0.540942 | 8:+48694627 | MsG0880044751.01.T01:CDS |
| CAGATATCTTCATCTTTGGA+AGG | 0.542898 | 8:+48694325 | MsG0880044751.01.T01:CDS |
| GCCGGGAGGTTAATTCGAAA+AGG | 0.547695 | 8:-48694587 | None:intergenic |
| GGAAATTGGCGCAGATATTG+TGG | 0.550517 | 8:+48695468 | MsG0880044751.01.T01:CDS |
| AAAGGCCTCAAATATGAAGA+AGG | 0.551811 | 8:+48695796 | MsG0880044751.01.T01:CDS |
| AGAAAGAGTTGTTGAAGTTG+AGG | 0.556826 | 8:-48694557 | None:intergenic |
| CAGTCAATGACAATTTCACT+TGG | 0.567139 | 8:+48695617 | MsG0880044751.01.T01:CDS |
| TGGTCCTACTTTATAAACAA+AGG | 0.574848 | 8:+48695637 | MsG0880044751.01.T01:CDS |
| GAATGTCGCGGGATTTGCGG+AGG | 0.575959 | 8:-48694427 | None:intergenic |
| TTCACATCATTCGACATCAA+AGG | 0.576094 | 8:+48695834 | MsG0880044751.01.T01:CDS |
| TTCAGGATAATTTAGAACAG+AGG | 0.577005 | 8:-48695960 | None:intergenic |
| GAAGAAGAATCCGACGACGG+AGG | 0.581320 | 8:+48694188 | MsG0880044751.01.T01:CDS |
| GAAAGTTGAAATAGAAGACC+TGG | 0.583944 | 8:-48694352 | None:intergenic |
| AGAAGATTTGAGTTGAAACA+TGG | 0.586977 | 8:-48696016 | None:intergenic |
| TCTTCCAACGAAAACTTCTG+TGG | 0.587746 | 8:+48694280 | MsG0880044751.01.T01:CDS |
| AAGTCAATTCTGTTGAAACA+TGG | 0.588952 | 8:+48694516 | MsG0880044751.01.T01:CDS |
| AATAGTGAGTTACATCTCAA+AGG | 0.593499 | 8:+48695778 | MsG0880044751.01.T01:CDS |
| GTTAGTGACTCCTCCGTCGT+CGG | 0.598507 | 8:-48694198 | None:intergenic |
| GTCGCCGTCGACAGGTTGAG+TGG | 0.602805 | 8:+48694221 | MsG0880044751.01.T01:CDS |
| GTTGAGGTCCAATGGAAGCA+AGG | 0.610519 | 8:-48694541 | None:intergenic |
| TTATGAGAACTTGAAGCATG+TGG | 0.613522 | 8:-48696059 | None:intergenic |
| GACAAATTTACTTTCAACCG+GGG | 0.636895 | 8:-48695725 | None:intergenic |
| AATGATGCAACCTTTCTGAA+CGG | 0.640961 | 8:-48694386 | None:intergenic |
| ATGTGGCATTTCTCAACACA+TGG | 0.651654 | 8:-48696042 | None:intergenic |
| GAAGATATCTGTGAGAAACA+AGG | 0.657754 | 8:-48694313 | None:intergenic |
| TTTAGAACAGAGGCATGAGG+TGG | 0.661976 | 8:-48695950 | None:intergenic |
| TTACGGTCCAATCGATATCG+AGG | 0.676247 | 8:+48695405 | MsG0880044751.01.T01:CDS |
| TAATTTAGAACAGAGGCATG+AGG | 0.682914 | 8:-48695953 | None:intergenic |
| TGGCAACTTTCACAGTATGG+CGG | 0.688505 | 8:+48695681 | MsG0880044751.01.T01:CDS |
| GAAGAAGAAGAATCCGACGA+CGG | 0.690470 | 8:+48694185 | MsG0880044751.01.T01:CDS |
| TAAACCACTCAACCTGTCGA+CGG | 0.704120 | 8:-48694225 | None:intergenic |
| TGAGAAAGAAGGAAGCCGGG+AGG | 0.751446 | 8:-48694601 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATTTGTAAAATTAAG+TGG | + | Chr8:48694826-48694845 | MsG0880044751.01.T01:intron | 10.0% |
| !! | TTATTACATTATTATAAATC+AGG | - | Chr8:48694742-48694761 | None:intergenic | 10.0% |
| !! | CAATATTATAAATCAAGTAT+TGG | - | Chr8:48694794-48694813 | None:intergenic | 15.0% |
| !! | TACATATTTGATCATAAATT+AGG | - | Chr8:48694983-48695002 | None:intergenic | 15.0% |
| !! | GTGGATACAAAATAAATTAT+AGG | - | Chr8:48695317-48695336 | None:intergenic | 20.0% |
| !! | TAGAAAGAAAAAAAAGTAAG+TGG | - | Chr8:48695336-48695355 | None:intergenic | 20.0% |
| !! | TATTAACAAGTTAGTGTTTA+AGG | + | Chr8:48694690-48694709 | MsG0880044751.01.T01:intron | 20.0% |
| ! | AAAAACTTAAAACAAACTGC+AGG | + | Chr8:48695281-48695300 | MsG0880044751.01.T01:intron | 25.0% |
| ! | AAACAAAGGATCTATCAATT+TGG | + | Chr8:48695651-48695670 | MsG0880044751.01.T01:CDS | 25.0% |
| ! | AACAAAGGATCTATCAATTT+GGG | + | Chr8:48695652-48695671 | MsG0880044751.01.T01:CDS | 25.0% |
| ! | AATTAAACTAGAGGAAGATT+TGG | + | Chr8:48694932-48694951 | MsG0880044751.01.T01:intron | 25.0% |
| ! | CTCAACTGAAAAAAAATATC+CGG | + | Chr8:48695026-48695045 | MsG0880044751.01.T01:intron | 25.0% |
| ! | GCTTGAATAAATTAAACTAG+AGG | + | Chr8:48694923-48694942 | MsG0880044751.01.T01:intron | 25.0% |
| ! | TCAAGCTACTATCATTATTT+AGG | - | Chr8:48694909-48694928 | None:intergenic | 25.0% |
| ! | TGTGATGATAGCATTAAAAT+AGG | - | Chr8:48694661-48694680 | None:intergenic | 25.0% |
| !! | AGATCCTTTGTTTATAAAGT+AGG | - | Chr8:48695644-48695663 | None:intergenic | 25.0% |
| !! | TATGTTTTGTATGTGTAGTT+TGG | + | Chr8:48695884-48695903 | MsG0880044751.01.T01:intron | 25.0% |
| !!! | GACATCAAGGTTTTAAAAAA+CGG | - | Chr8:48695206-48695225 | None:intergenic | 25.0% |
| !!! | TAAGGTTTTTTTTTTGCCTT+AGG | + | Chr8:48694708-48694727 | MsG0880044751.01.T01:intron | 25.0% |
| AAGTCAATTCTGTTGAAACA+TGG | + | Chr8:48694516-48694535 | MsG0880044751.01.T01:CDS | 30.0% | |
| AATAGTGAGTTACATCTCAA+AGG | + | Chr8:48695778-48695797 | MsG0880044751.01.T01:CDS | 30.0% | |
| ATGACAATAGACATAGAATC+CGG | - | Chr8:48695048-48695067 | None:intergenic | 30.0% | |
| ATGTTTCAACTCAAATCTTC+TGG | + | Chr8:48696018-48696037 | MsG0880044751.01.T01:CDS | 30.0% | |
| GAAATAGTTTACTTTCTGTC+TGG | + | Chr8:48695499-48695518 | MsG0880044751.01.T01:CDS | 30.0% | |
| TATCACCTTCTTCATATTTG+AGG | - | Chr8:48695804-48695823 | None:intergenic | 30.0% | |
| TCGACAAATTTACTTTCAAC+CGG | - | Chr8:48695730-48695749 | None:intergenic | 30.0% | |
| TCTATGTCTATTGTCATGAA+CGG | + | Chr8:48695051-48695070 | MsG0880044751.01.T01:intron | 30.0% | |
| TGATGTAAATCACGAAATTC+AGG | - | Chr8:48695980-48695999 | None:intergenic | 30.0% | |
| TGGTCCTACTTTATAAACAA+AGG | + | Chr8:48695637-48695656 | MsG0880044751.01.T01:CDS | 30.0% | |
| ! | ATTAGTAGCATTGAGAAAGA+AGG | - | Chr8:48694615-48694634 | None:intergenic | 30.0% |
| ! | GTAACTCACTATTGTCATTT+CGG | - | Chr8:48695771-48695790 | None:intergenic | 30.0% |
| ! | TCTATCAATTTGGGTATTGT+TGG | + | Chr8:48695661-48695680 | MsG0880044751.01.T01:CDS | 30.0% |
| ! | TTCAGGATAATTTAGAACAG+AGG | - | Chr8:48695963-48695982 | None:intergenic | 30.0% |
| !! | ACTTCGTTAAAAAGTGCTTA+TGG | - | Chr8:48695231-48695250 | None:intergenic | 30.0% |
| !! | AGAAGATTTGAGTTGAAACA+TGG | - | Chr8:48696019-48696038 | None:intergenic | 30.0% |
| !! | AGAATTGACTTGAGATTGAA+AGG | - | Chr8:48694507-48694526 | None:intergenic | 30.0% |
| !! | TAAGCACTTTTTAACGAAGT+TGG | + | Chr8:48695231-48695250 | MsG0880044751.01.T01:intron | 30.0% |
| !! | TTGGAGTTCTAAACTAGATA+AGG | + | Chr8:48694951-48694970 | MsG0880044751.01.T01:intron | 30.0% |
| AAAATAGGTTAACGTACCTG+AGG | - | Chr8:48694646-48694665 | None:intergenic | 35.0% | |
| AAAGGCCTCAAATATGAAGA+AGG | + | Chr8:48695796-48695815 | MsG0880044751.01.T01:CDS | 35.0% | |
| AAATCAGGTTAACGTACCTA+AGG | - | Chr8:48694727-48694746 | None:intergenic | 35.0% | |
| AACTTAAAACAAACTGCAGG+AGG | + | Chr8:48695284-48695303 | MsG0880044751.01.T01:intron | 35.0% | |
| AAGTAAACCTGCAAAGTTTC+CGG | - | Chr8:48695535-48695554 | None:intergenic | 35.0% | |
| AATGATGCAACCTTTCTGAA+CGG | - | Chr8:48694389-48694408 | None:intergenic | 35.0% | |
| ACTTTGGTCACAAAGTCTTT+AGG | - | Chr8:48695568-48695587 | None:intergenic | 35.0% | |
| AGAAAGAGTTGTTGAAGTTG+AGG | - | Chr8:48694560-48694579 | None:intergenic | 35.0% | |
| CAGATATCTTCATCTTTGGA+AGG | + | Chr8:48694325-48694344 | MsG0880044751.01.T01:CDS | 35.0% | |
| CAGTCAATGACAATTTCACT+TGG | + | Chr8:48695617-48695636 | MsG0880044751.01.T01:CDS | 35.0% | |
| CGACAAATTTACTTTCAACC+GGG | - | Chr8:48695729-48695748 | None:intergenic | 35.0% | |
| CTCACAGATATCTTCATCTT+TGG | + | Chr8:48694321-48694340 | MsG0880044751.01.T01:CDS | 35.0% | |
| CTTTGGTCACAAAGTCTTTA+GGG | - | Chr8:48695567-48695586 | None:intergenic | 35.0% | |
| GAAAGTTGAAATAGAAGACC+TGG | - | Chr8:48694355-48694374 | None:intergenic | 35.0% | |
| GAAGATATCTGTGAGAAACA+AGG | - | Chr8:48694316-48694335 | None:intergenic | 35.0% | |
| GACAAATTTACTTTCAACCG+GGG | - | Chr8:48695728-48695747 | None:intergenic | 35.0% | |
| GATGGAAAATGAACAGAAGA+AGG | - | Chr8:48695436-48695455 | None:intergenic | 35.0% | |
| TCTTCTTCTTCTTCTTTAGC+TGG | - | Chr8:48694176-48694195 | None:intergenic | 35.0% | |
| TGAAAACACTGCAGTCTTTA+CGG | + | Chr8:48695388-48695407 | MsG0880044751.01.T01:intron | 35.0% | |
| TTATGAGAACTTGAAGCATG+TGG | - | Chr8:48696062-48696081 | None:intergenic | 35.0% | |
| TTCACATCATTCGACATCAA+AGG | + | Chr8:48695834-48695853 | MsG0880044751.01.T01:CDS | 35.0% | |
| ! | AGAAGTTTTCGTTGGAAGAA+AGG | - | Chr8:48694279-48694298 | None:intergenic | 35.0% |
| ! | GTTTCTTGATGTATTTTCCC+CGG | + | Chr8:48695708-48695727 | MsG0880044751.01.T01:CDS | 35.0% |
| ! | TAATTTAGAACAGAGGCATG+AGG | - | Chr8:48695956-48695975 | None:intergenic | 35.0% |
| !! | AATTAAGTGGTGTTGCGATA+CGG | + | Chr8:48694839-48694858 | MsG0880044751.01.T01:intron | 35.0% |
| !!! | ATGAAAGTTTTGAATGTCGC+GGG | - | Chr8:48694441-48694460 | None:intergenic | 35.0% |
| !!! | CATGAACGGCAATTTTTTTG+CGG | + | Chr8:48695065-48695084 | MsG0880044751.01.T01:intron | 35.0% |
| !!! | GATGAAAGTTTTGAATGTCG+CGG | - | Chr8:48694442-48694461 | None:intergenic | 35.0% |
| AGTAAACCTGCAAAGTTTCC+GGG | - | Chr8:48695534-48695553 | None:intergenic | 40.0% | |
| AGTGCTTATGGATGACATCA+AGG | - | Chr8:48695219-48695238 | None:intergenic | 40.0% | |
| ATATGACATATCAGCGAGTC+TGG | - | Chr8:48694251-48694270 | None:intergenic | 40.0% | |
| ATGTGGCATTTCTCAACACA+TGG | - | Chr8:48696045-48696064 | None:intergenic | 40.0% | |
| ATTTCCAGCTTCTTCAGTGA+TGG | - | Chr8:48695454-48695473 | None:intergenic | 40.0% | |
| CAAAGTTGGAACGACAACTT+TGG | - | Chr8:48695584-48695603 | None:intergenic | 40.0% | |
| CTACTAATATCGTTTGCCTC+AGG | + | Chr8:48694627-48694646 | MsG0880044751.01.T01:CDS | 40.0% | |
| GCCGCAATGAAACAATGTTA+CGG | - | Chr8:48695091-48695110 | None:intergenic | 40.0% | |
| GCCGTAACATTGTTTCATTG+CGG | + | Chr8:48695087-48695106 | MsG0880044751.01.T01:intron | 40.0% | |
| TCACTGAAGAAGCTGGAAAT+TGG | + | Chr8:48695454-48695473 | MsG0880044751.01.T01:CDS | 40.0% | |
| TCGATCAATTCCGTTCAGAA+AGG | + | Chr8:48694376-48694395 | MsG0880044751.01.T01:CDS | 40.0% | |
| TCTTCCAACGAAAACTTCTG+TGG | + | Chr8:48694280-48694299 | MsG0880044751.01.T01:CDS | 40.0% | |
| TGTTGGCAACTTTCACAGTA+TGG | + | Chr8:48695678-48695697 | MsG0880044751.01.T01:CDS | 40.0% | |
| TTCGGATGAGGTTGAGAATA+GGG | - | Chr8:48695753-48695772 | None:intergenic | 40.0% | |
| TTGTTGAAGTTGAGGTCCAA+TGG | - | Chr8:48694552-48694571 | None:intergenic | 40.0% | |
| TTGTTTCATTGCGGCTGTAA+CGG | + | Chr8:48695096-48695115 | MsG0880044751.01.T01:intron | 40.0% | |
| TTTCGGATGAGGTTGAGAAT+AGG | - | Chr8:48695754-48695773 | None:intergenic | 40.0% | |
| ! | CACTATTGTCATTTCGGATG+AGG | - | Chr8:48695765-48695784 | None:intergenic | 40.0% |
| ! | TCCTTTTCGAATTAACCTCC+CGG | + | Chr8:48694586-48694605 | MsG0880044751.01.T01:CDS | 40.0% |
| ! | TTTTCCATCACTGAAGAAGC+TGG | + | Chr8:48695447-48695466 | MsG0880044751.01.T01:CDS | 40.0% |
| ACATGGATCCTTGCTTCCAT+TGG | + | Chr8:48694533-48694552 | MsG0880044751.01.T01:CDS | 45.0% | |
| AGAAAAAGGCTGCGACAAGA+AGG | - | Chr8:48695173-48695192 | None:intergenic | 45.0% | |
| CATTGAGAAAGAAGGAAGCC+GGG | - | Chr8:48694607-48694626 | None:intergenic | 45.0% | |
| GAAGAAGAAGAATCCGACGA+CGG | + | Chr8:48694185-48694204 | MsG0880044751.01.T01:CDS | 45.0% | |
| GCATTGAGAAAGAAGGAAGC+CGG | - | Chr8:48694608-48694627 | None:intergenic | 45.0% | |
| GGAAATTGGCGCAGATATTG+TGG | + | Chr8:48695468-48695487 | MsG0880044751.01.T01:CDS | 45.0% | |
| GGTTTCACCTCGATATCGAT+TGG | - | Chr8:48695415-48695434 | None:intergenic | 45.0% | |
| GTTTCAGAGCTGGACAAAGT+TGG | - | Chr8:48695598-48695617 | None:intergenic | 45.0% | |
| TAAACCACTCAACCTGTCGA+CGG | - | Chr8:48694228-48694247 | None:intergenic | 45.0% | |
| TGGCAACTTTCACAGTATGG+CGG | + | Chr8:48695681-48695700 | MsG0880044751.01.T01:CDS | 45.0% | |
| TTACGGTCCAATCGATATCG+AGG | + | Chr8:48695405-48695424 | MsG0880044751.01.T01:CDS | 45.0% | |
| TTGTTATCGTGTACGTGCAG+TGG | + | Chr8:48695927-48695946 | MsG0880044751.01.T01:intron | 45.0% | |
| TTTGAATGTCGCGGGATTTG+CGG | - | Chr8:48694433-48694452 | None:intergenic | 45.0% | |
| ! | CGACAAGAAGGTATAGGTAG+TGG | - | Chr8:48695161-48695180 | None:intergenic | 45.0% |
| ! | GTCATTGACTGTTTCAGAGC+TGG | - | Chr8:48695608-48695627 | None:intergenic | 45.0% |
| ! | GTTGCCACAGAAGTTTTCGT+TGG | - | Chr8:48694287-48694306 | None:intergenic | 45.0% |
| ! | TCATCTTTGGAAGGATCTCC+AGG | + | Chr8:48694334-48694353 | MsG0880044751.01.T01:CDS | 45.0% |
| ! | TCTTGTCGCAGCCTTTTTCT+TGG | + | Chr8:48695173-48695192 | MsG0880044751.01.T01:intron | 45.0% |
| ! | TTTAGAACAGAGGCATGAGG+TGG | - | Chr8:48695953-48695972 | None:intergenic | 45.0% |
| !! | TGGTGTTGCGATACGGATTA+CGG | + | Chr8:48694846-48694865 | MsG0880044751.01.T01:intron | 45.0% |
| ACCTGCAAAGTTTCCGGGTT+TGG | - | Chr8:48695529-48695548 | None:intergenic | 50.0% | |
| CCTGCAAAGTTTCCGGGTTT+GGG | - | Chr8:48695528-48695547 | None:intergenic | 50.0% | |
| CTGCAAAGTTTCCGGGTTTG+GGG | - | Chr8:48695527-48695546 | None:intergenic | 50.0% | |
| GCCGGGAGGTTAATTCGAAA+AGG | - | Chr8:48694590-48694609 | None:intergenic | 50.0% | |
| GTTGAGGTCCAATGGAAGCA+AGG | - | Chr8:48694544-48694563 | None:intergenic | 50.0% | |
| ! | AGGCTGCGACAAGAAGGTAT+AGG | - | Chr8:48695167-48695186 | None:intergenic | 50.0% |
| ! | CGCAGCCTTTTTCTTGGTGA+CGG | + | Chr8:48695179-48695198 | MsG0880044751.01.T01:intron | 50.0% |
| !! | GCAGCCTTTTTCTTGGTGAC+GGG | + | Chr8:48695180-48695199 | MsG0880044751.01.T01:intron | 50.0% |
| ACGGCCCGTCACCAAGAAAA+AGG | - | Chr8:48695187-48695206 | None:intergenic | 55.0% | |
| CCCAAACCCGGAAACTTTGC+AGG | + | Chr8:48695525-48695544 | MsG0880044751.01.T01:CDS | 55.0% | |
| GAAGAAGAATCCGACGACGG+AGG | + | Chr8:48694188-48694207 | MsG0880044751.01.T01:CDS | 55.0% | |
| GTTAGTGACTCCTCCGTCGT+CGG | - | Chr8:48694201-48694220 | None:intergenic | 55.0% | |
| TGAGAAAGAAGGAAGCCGGG+AGG | - | Chr8:48694604-48694623 | None:intergenic | 55.0% | |
| GAATGTCGCGGGATTTGCGG+AGG | - | Chr8:48694430-48694449 | None:intergenic | 60.0% | |
| TCACTAACGTCGCCGTCGAC+AGG | + | Chr8:48694213-48694232 | MsG0880044751.01.T01:CDS | 60.0% | |
| ! | TCTGTCTGGCTCCCCAAACC+CGG | + | Chr8:48695513-48695532 | MsG0880044751.01.T01:CDS | 60.0% |
| ! | GTCGCCGTCGACAGGTTGAG+TGG | + | Chr8:48694221-48694240 | MsG0880044751.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 48694158 | 48696081 | 48694158 | ID=MsG0880044751.01;Name=MsG0880044751.01 |
| Chr8 | mRNA | 48694158 | 48696081 | 48694158 | ID=MsG0880044751.01.T01;Parent=MsG0880044751.01;Name=MsG0880044751.01.T01;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|3|0|359 |
| Chr8 | exon | 48694158 | 48694648 | 48694158 | ID=MsG0880044751.01.T01:exon:20155;Parent=MsG0880044751.01.T01 |
| Chr8 | exon | 48695402 | 48695855 | 48695402 | ID=MsG0880044751.01.T01:exon:20156;Parent=MsG0880044751.01.T01 |
| Chr8 | exon | 48695947 | 48696081 | 48695947 | ID=MsG0880044751.01.T01:exon:20157;Parent=MsG0880044751.01.T01 |
| Chr8 | CDS | 48694158 | 48694648 | 48694158 | ID=MsG0880044751.01.T01:cds;Parent=MsG0880044751.01.T01 |
| Chr8 | CDS | 48695402 | 48695855 | 48695402 | ID=MsG0880044751.01.T01:cds;Parent=MsG0880044751.01.T01 |
| Chr8 | CDS | 48695947 | 48696081 | 48695947 | ID=MsG0880044751.01.T01:cds;Parent=MsG0880044751.01.T01 |
| Gene Sequence |
| Protein sequence |
