AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380016096.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016096.01.T01 MTR_3g083350 93.214 501 21 1 1 501 1 488 0.0 848
MsG0380016096.01.T01 MTR_7g117270 35.509 383 225 6 16 390 47 415 1.75e-65 225
MsG0380016096.01.T01 MTR_3g105530 28.281 442 268 13 32 446 7 426 3.14e-35 139
MsG0380016096.01.T01 MTR_7g107280 25.490 408 278 9 38 434 14 406 2.13e-29 121
MsG0380016096.01.T01 MTR_8g089370 27.666 347 231 8 54 393 35 368 4.12e-29 120
MsG0380016096.01.T01 MTR_6g033595 26.535 456 277 15 34 454 25 457 9.06e-29 120
MsG0380016096.01.T01 MTR_7g088530 25.065 383 265 8 22 399 12 377 7.97e-27 114
MsG0380016096.01.T01 MTR_1g072550 27.200 375 249 12 44 407 18 379 5.32e-26 111
MsG0380016096.01.T01 MTR_0153s0070 31.010 287 162 7 81 350 68 335 2.19e-25 108
MsG0380016096.01.T01 MTR_3g074730 28.528 326 213 5 72 391 73 384 7.20e-25 107
MsG0380016096.01.T01 MTR_1g019170 27.688 372 229 9 83 447 52 390 7.97e-25 108
MsG0380016096.01.T01 MTR_1g032040 27.123 365 247 10 50 407 27 379 1.70e-24 106
MsG0380016096.01.T01 MTR_1g032380 27.123 365 247 10 50 407 27 379 1.70e-24 106
MsG0380016096.01.T01 MTR_3g029990 27.913 369 232 9 83 447 52 390 5.28e-24 107
MsG0380016096.01.T01 MTR_3g029990 27.913 369 232 9 83 447 52 390 6.11e-24 107
MsG0380016096.01.T01 MTR_3g030020 27.697 343 222 7 106 447 30 347 2.48e-23 102
MsG0380016096.01.T01 MTR_1g098960 27.446 368 235 8 83 447 54 392 4.31e-21 96.7
MsG0380016096.01.T01 MTR_4g053720 27.829 327 211 10 52 367 20 332 5.26e-21 95.5
MsG0380016096.01.T01 MTR_2g006740 93.182 44 3 0 295 338 12 55 1.27e-20 86.3
MsG0380016096.01.T01 MTR_6g043850 25.672 335 232 7 57 389 31 350 2.31e-20 96.3
MsG0380016096.01.T01 MTR_7g018630 25.882 340 234 6 65 401 62 386 8.90e-20 92.8
MsG0380016096.01.T01 MTR_3g063230 24.658 365 223 13 57 395 53 391 3.36e-19 91.3
MsG0380016096.01.T01 MTR_0153s0070 25.389 386 213 11 81 446 38 368 3.37e-18 87.4
MsG0380016096.01.T01 MTR_2g067960 24.171 422 275 13 77 480 34 428 5.17e-18 87.4
MsG0380016096.01.T01 MTR_3g063230 25.926 324 198 14 81 395 77 367 5.73e-16 80.9
MsG0380016096.01.T01 MTR_3g448960 28.571 252 150 6 83 331 54 278 2.82e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380016096.01.T01 AT5G62990 60.641 437 152 4 32 468 35 451 2.10e-166 486
MsG0380016096.01.T01 AT4G01037 32.870 432 246 7 6 406 12 430 1.44e-63 220
MsG0380016096.01.T01 AT5G48040 32.164 342 216 7 54 393 37 364 1.13e-34 137
MsG0380016096.01.T01 AT5G45790 28.775 351 220 9 57 398 69 398 7.54e-32 129
MsG0380016096.01.T01 AT5G45790 30.120 332 198 9 80 398 3 313 3.31e-30 122
MsG0380016096.01.T01 AT3G63090 28.534 382 251 11 30 402 9 377 1.83e-29 121
MsG0380016096.01.T01 AT5G21970 29.282 362 223 9 52 397 44 388 2.03e-28 119
MsG0380016096.01.T01 AT5G21970 29.282 362 223 9 52 397 44 388 2.03e-28 119
MsG0380016096.01.T01 AT2G31290 27.154 383 249 10 56 429 28 389 1.40e-27 116
MsG0380016096.01.T01 AT2G31290 27.154 383 249 10 56 429 28 389 1.40e-27 116
MsG0380016096.01.T01 AT3G58520 27.049 366 242 9 54 408 33 384 1.68e-25 110
MsG0380016096.01.T01 AT4G33495 27.226 393 230 11 57 423 47 409 3.27e-25 108
MsG0380016096.01.T01 AT4G08940 28.438 320 214 5 72 390 81 386 1.56e-24 107
MsG0380016096.01.T01 AT1G71850 25.253 396 259 12 53 429 28 405 3.13e-24 107
MsG0380016096.01.T01 AT4G24320 29.781 319 185 10 112 407 79 381 9.56e-24 104
MsG0380016096.01.T01 AT1G79120 28.814 354 207 12 58 389 64 394 3.81e-23 103
MsG0380016096.01.T01 AT1G79120 28.814 354 207 12 58 389 64 394 3.81e-23 103
MsG0380016096.01.T01 AT1G06440 28.025 314 199 8 90 390 71 370 8.32e-23 101
MsG0380016096.01.T01 AT2G39120 25.622 402 254 12 46 427 10 386 4.06e-22 99.4
MsG0380016096.01.T01 AT3G58520 27.632 304 197 8 116 408 81 372 4.32e-22 99.8

Find 156 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTCCTCTCAATTTATT+TGG 0.066976 3:-79109635 None:intergenic
ACAACAAGATTGGAGAATTT+TGG 0.158344 3:+79110062 MsG0380016096.01.T01:CDS
TGATGAGAAGGGTAACTTAT+TGG 0.227907 3:+79109730 MsG0380016096.01.T01:CDS
GCTAGGATTGATAAAGAATT+TGG 0.238807 3:+79109836 MsG0380016096.01.T01:CDS
CTCTCAGCAGGGTTGTTATA+AGG 0.249237 3:-79109485 None:intergenic
CAAACTCGTATAAAATAATT+CGG 0.271674 3:-79109669 None:intergenic
TTCTGCTTCAATTGATTCCT+TGG 0.285857 3:-79109513 None:intergenic
GTTCACCTTGCTCCTGATCT+TGG 0.289171 3:+79109197 MsG0380016096.01.T01:CDS
GAGATAGCATAAGAAGCTTT+TGG 0.290608 3:-79109145 None:intergenic
TCTCTCTCTTCTCATTCTCT+TGG 0.292427 3:-79109807 None:intergenic
TTATTCTCTGTTTCATCCTT+TGG 0.295720 3:+79111175 MsG0380016096.01.T01:CDS
TTGTTATAAGGGCACACTTC+TGG 0.313439 3:-79109473 None:intergenic
TAACAACCCTGCTGAGAGTT+TGG 0.314464 3:+79109490 MsG0380016096.01.T01:CDS
TGATGCTGCTATGGGGCATT+TGG 0.324908 3:+79111669 MsG0380016096.01.T01:CDS
ACCAGTAAATCAAAATCATT+AGG 0.334924 3:-79111233 None:intergenic
TCATTCCTCTCAATTTATTT+GGG 0.340961 3:-79109634 None:intergenic
ACCCATTTCAGAAAGGAGTT+TGG 0.341767 3:+79109608 MsG0380016096.01.T01:CDS
TGGTTCAAGGCCAAGGTGTT+TGG 0.344445 3:+79111139 MsG0380016096.01.T01:intron
GTCCATCCATTTATCTTGTA+AGG 0.345869 3:-79109771 None:intergenic
CGTTCAACAAATGAGTAGTT+TGG 0.351527 3:-79111004 None:intergenic
CAGAGATATTTCAATATTGC+AGG 0.351854 3:+79111593 MsG0380016096.01.T01:CDS
CCAGTAAATCAAAATCATTA+GGG 0.356577 3:-79111232 None:intergenic
GTCCAAACTCCTTTCTGAAA+TGG 0.358720 3:-79109610 None:intergenic
CGGTGCTTATGTGTTCTTGA+TGG 0.364236 3:+79111749 MsG0380016096.01.T01:CDS
CTGGATGGTCATTGCACAAC+CGG 0.365261 3:-79109241 None:intergenic
GCAAGAGGGCGATTGGAATA+TGG 0.366919 3:+79111343 MsG0380016096.01.T01:CDS
ATTAGTCTCTAAAATTCTTA+AGG 0.370775 3:+79110970 MsG0380016096.01.T01:CDS
ATCGTCTATTTCAACAGTAT+TGG 0.374767 3:+79109112 MsG0380016096.01.T01:CDS
TTCAAAGATGATTATGATGA+TGG 0.377284 3:+79109971 MsG0380016096.01.T01:CDS
ACTGCAAGTGCGGCTGCAGC+TGG 0.378235 3:-79109071 None:intergenic
CACAACCGGGATCTAAAATT+AGG 0.378289 3:-79109227 None:intergenic
ACCAAATTCCTAACCTTTGA+CGG 0.379848 3:-79111383 None:intergenic
TTAATCGGAAGAAAATGTTT+TGG 0.380320 3:-79108885 None:intergenic
GGTTCAAGGCCAAGGTGTTT+GGG 0.381200 3:+79111140 MsG0380016096.01.T01:intron
TTGAGAGGTGTGGGTGGCCA+TGG 0.383690 3:-79109008 None:intergenic
GCTGTTATAAGAGAGGTTCT+TGG 0.393796 3:+79109548 MsG0380016096.01.T01:CDS
TCTCAGCAGGGTTGTTATAA+GGG 0.401018 3:-79109484 None:intergenic
TCCAAACTCCTTTCTGAAAT+GGG 0.403617 3:-79109609 None:intergenic
TTCTCTGTTTCATCCTTTGG+TGG 0.407005 3:+79111178 MsG0380016096.01.T01:CDS
CTCGACTCATGATGCTGCTA+TGG 0.407062 3:+79111660 MsG0380016096.01.T01:CDS
GATTTGTTTGACAACAAGAT+TGG 0.413459 3:+79110052 MsG0380016096.01.T01:CDS
AAACTCGTATAAAATAATTC+GGG 0.414063 3:-79109668 None:intergenic
TCAATGATCTTGAATTTGTC+TGG 0.419429 3:-79109260 None:intergenic
CTCAATTGTTTGAACTTCAA+AGG 0.419774 3:-79109386 None:intergenic
TTAAAATTCTGTCCAAATGT+AGG 0.422916 3:+79108904 MsG0380016096.01.T01:CDS
TCCTTGGCCAAACTCTCAGC+AGG 0.434855 3:-79109497 None:intergenic
TGAAAGATAAGCCCTACATT+TGG 0.441339 3:-79108916 None:intergenic
CCTTTCTTAGTCAGCAATAA+CGG 0.444662 3:+79108645 MsG0380016096.01.T01:CDS
TCTCATCAAATCGCTCTACT+AGG 0.444788 3:-79109715 None:intergenic
CAACTATTAAATCAAGAGAA+TGG 0.444997 3:-79109358 None:intergenic
TGGGACTCACGCGGAGGTAA+AGG 0.457292 3:-79109338 None:intergenic
GAAGAGAGAGAAGGAAGGCT+AGG 0.457822 3:+79109819 MsG0380016096.01.T01:CDS
AACTATTAAATCAAGAGAAT+GGG 0.459579 3:-79109357 None:intergenic
CCAACTTTGCCAGTAGTAAC+CGG 0.459749 3:-79109175 None:intergenic
TTGTCATGAGGAACAGAATC+CGG 0.464090 3:+79108826 MsG0380016096.01.T01:CDS
TAAAATTCTGTCCAAATGTA+GGG 0.464670 3:+79108905 MsG0380016096.01.T01:CDS
TGAGGATATATTTGAAGACT+TGG 0.466248 3:+79109997 MsG0380016096.01.T01:CDS
TCGACTCATGATGCTGCTAT+GGG 0.466432 3:+79111661 MsG0380016096.01.T01:CDS
TAATTTAAAGAGGCCTCACC+GGG 0.468128 3:+79109424 MsG0380016096.01.T01:CDS
GTGGAACTGAGGGAATTTAC+CGG 0.468878 3:-79108669 None:intergenic
GAAAGGGGCTTAATTTAAAG+AGG 0.470084 3:+79109414 MsG0380016096.01.T01:CDS
AAGATCATTGACACTTCCTA+TGG 0.476208 3:+79109272 MsG0380016096.01.T01:CDS
TTCGCGACCGCACTCTTGAC+AGG 0.476319 3:+79108799 MsG0380016096.01.T01:CDS
AGTTTCAGCAAGAGGGCGAT+TGG 0.476891 3:+79111336 MsG0380016096.01.T01:CDS
ATAATCAATATCACTGTCAT+CGG 0.482631 3:-79109885 None:intergenic
CCAAATTCCTAACCTTTGAC+GGG 0.485703 3:-79111382 None:intergenic
TCCTCACCGCCGGTTACTAC+TGG 0.486639 3:+79109166 MsG0380016096.01.T01:CDS
TTAATTTAAAGAGGCCTCAC+CGG 0.489651 3:+79109423 MsG0380016096.01.T01:CDS
TATGGGGCATTTGGCACAAT+CGG 0.490523 3:+79111678 MsG0380016096.01.T01:CDS
GATTGATGAGGAGATTTATG+TGG 0.492788 3:+79111303 MsG0380016096.01.T01:CDS
TTTGAAAGGGCAAAGGGACT+CGG 0.493718 3:+79109688 MsG0380016096.01.T01:CDS
TGCAGCCGCACTTGCAGTTG+AGG 0.498535 3:+79109076 MsG0380016096.01.T01:CDS
TACGAGTTTGAAAGGGCAAA+GGG 0.499162 3:+79109682 MsG0380016096.01.T01:CDS
TTGGAATGACAATTGAAAAG+AGG 0.501920 3:+79109567 MsG0380016096.01.T01:CDS
CCGTTATTGCTGACTAAGAA+AGG 0.503193 3:-79108645 None:intergenic
AAGCTCAAGTGCACGTCCAT+AGG 0.503889 3:-79109288 None:intergenic
TAACTTATTGGAGAAGGATG+AGG 0.511987 3:+79109742 MsG0380016096.01.T01:CDS
CAAACTACTCATTTGTTGAA+CGG 0.514343 3:+79111005 MsG0380016096.01.T01:CDS
CCGGTTACTACTGGCAAAGT+TGG 0.519367 3:+79109175 MsG0380016096.01.T01:CDS
GGATTGATAAAGAATTTGGC+AGG 0.519833 3:+79109840 MsG0380016096.01.T01:CDS
TTGAATTGTTTACTATCCCA+TGG 0.520794 3:+79108991 MsG0380016096.01.T01:CDS
TGTCAAACAAATCGTTTCCC+AGG 0.524973 3:-79110042 None:intergenic
ATTGTTTGAACTTCAAAGGT+CGG 0.526316 3:-79109382 None:intergenic
GAAGCTGAGGATTATGACCT+GGG 0.526953 3:+79110025 MsG0380016096.01.T01:CDS
TTAGGAGGAAGACCAAGATC+AGG 0.528609 3:-79109209 None:intergenic
TGAGAGGTGTGGGTGGCCAT+GGG 0.529539 3:-79109007 None:intergenic
TGAAGCTGAGGATTATGACC+TGG 0.537130 3:+79110024 MsG0380016096.01.T01:CDS
AGATAGCAGTGGAATATACT+TGG 0.537923 3:+79111265 MsG0380016096.01.T01:CDS
ACAAGATAAATGGATGGACT+TGG 0.544745 3:+79109775 MsG0380016096.01.T01:CDS
TAATCAATATCACTGTCATC+GGG 0.545096 3:-79109884 None:intergenic
TGTTGTTCCACGAAGAAAAG+TGG 0.545285 3:-79108688 None:intergenic
ATACGAGTTTGAAAGGGCAA+AGG 0.549737 3:+79109681 MsG0380016096.01.T01:CDS
CTTATGTGTTCTTGATGGAG+TGG 0.550807 3:+79111754 MsG0380016096.01.T01:CDS
TGTATCGTGCGATACCAACT+TGG 0.550835 3:+79109310 MsG0380016096.01.T01:CDS
TCGATGGATCATAGACAGTA+AGG 0.551421 3:-79108955 None:intergenic
TCTCTAAAATTCTTAAGGCT+AGG 0.553439 3:+79110975 MsG0380016096.01.T01:CDS
AGGTAAAGGCTTTGCCAAGT+TGG 0.553621 3:-79109324 None:intergenic
GAAGGGTAACTTATTGGAGA+AGG 0.555429 3:+79109736 MsG0380016096.01.T01:CDS
TTATGCTATCTCCTCACCGC+CGG 0.555653 3:+79109156 MsG0380016096.01.T01:CDS
CCACTTGACCCATTTCAGAA+AGG 0.560006 3:+79109601 MsG0380016096.01.T01:CDS
AAACAATTGAGACTTCGAAA+GGG 0.564618 3:+79109398 MsG0380016096.01.T01:CDS
CAAACAATTGAGACTTCGAA+AGG 0.569475 3:+79109397 MsG0380016096.01.T01:CDS
AATGAGAAGAGAGAGAAGGA+AGG 0.573040 3:+79109814 MsG0380016096.01.T01:CDS
CTTCTCTCGAGCATATATCA+AGG 0.573261 3:-79111622 None:intergenic
CTTAGTTGCGTTGAGAGGTG+TGG 0.573460 3:-79109018 None:intergenic
CCTTTCTGAAATGGGTCAAG+TGG 0.574688 3:-79109601 None:intergenic
TGATCTTGAATTTGTCTGGA+TGG 0.575399 3:-79109256 None:intergenic
CAAACTTTAGCAAGTAATCC+CGG 0.575661 3:-79109442 None:intergenic
GGACTCCCAAATAAATTGAG+AGG 0.578071 3:+79109629 MsG0380016096.01.T01:CDS
CAATTCCTCAACTGCAAGTG+CGG 0.581658 3:-79109081 None:intergenic
AGTAGAGCGATTTGATGAGA+AGG 0.582051 3:+79109718 MsG0380016096.01.T01:CDS
TGAAGAGAAGTTTCAGCAAG+AGG 0.582069 3:+79111328 MsG0380016096.01.T01:CDS
CCCTGCTGAGAGTTTGGCCA+AGG 0.582438 3:+79109496 MsG0380016096.01.T01:CDS
AACAATTGAGACTTCGAAAG+GGG 0.584929 3:+79109399 MsG0380016096.01.T01:CDS
TATAACTTAGTTGCGTTGAG+AGG 0.585447 3:-79109023 None:intergenic
CTTAGTCAGCAATAACGGAC+CGG 0.589570 3:+79108650 MsG0380016096.01.T01:CDS
AATCTGCTGTGCATCTGTGA+TGG 0.590014 3:-79111721 None:intergenic
GCACAAGACGTGCATCATAG+AGG 0.593683 3:+79111783 MsG0380016096.01.T01:CDS
ATAAATGGATGGACTTGGCG+AGG 0.596180 3:+79109780 MsG0380016096.01.T01:CDS
GTGGAATATCATGAGCAAGC+CGG 0.596962 3:+79110943 MsG0380016096.01.T01:CDS
TGGATGGTCATTGCACAACC+GGG 0.597590 3:-79109240 None:intergenic
AGCCTTACAAGATAAATGGA+TGG 0.598756 3:+79109769 MsG0380016096.01.T01:CDS
TTAGTTGCGTTGAGAGGTGT+GGG 0.602056 3:-79109017 None:intergenic
GAAGAGAAGTTTCAGCAAGA+GGG 0.605360 3:+79111329 MsG0380016096.01.T01:CDS
ACGAAGAAAAGTGGAACTGA+GGG 0.606364 3:-79108679 None:intergenic
GAAGACCAAGATCAGGAGCA+AGG 0.612166 3:-79109202 None:intergenic
ATGTTGTGCTGTTATAAGAG+AGG 0.617545 3:+79109541 MsG0380016096.01.T01:CDS
AACCGGGATCTAAAATTAGG+AGG 0.618298 3:-79109224 None:intergenic
TATTGCTGACTAAGAAAGGA+TGG 0.618511 3:-79108641 None:intergenic
AATCAGCTTATAGATTGATG+AGG 0.619737 3:+79111291 MsG0380016096.01.T01:CDS
AATTGAGAGGAATGATTGTG+AGG 0.622196 3:+79109642 MsG0380016096.01.T01:CDS
CACGAAGAAAAGTGGAACTG+AGG 0.624701 3:-79108680 None:intergenic
TAAATGGATGGACTTGGCGA+GGG 0.625962 3:+79109781 MsG0380016096.01.T01:CDS
GTAGAGCGATTTGATGAGAA+GGG 0.626749 3:+79109719 MsG0380016096.01.T01:CDS
GCCAGTAGTAACCGGCGGTG+AGG 0.629295 3:-79109167 None:intergenic
CTCGAGAGAAGTTGTTGATG+TGG 0.630742 3:+79111634 MsG0380016096.01.T01:CDS
AGGGCGATTGGAATATGGTG+TGG 0.636533 3:+79111348 MsG0380016096.01.T01:CDS
GATGCACAGCAGATTTGCAT+CGG 0.637483 3:+79111729 MsG0380016096.01.T01:CDS
GAATGTGAATGTCCCGTCAA+AGG 0.639894 3:+79111370 MsG0380016096.01.T01:CDS
GTCAAACGAACACATAGTTG+AGG 0.640241 3:-79109047 None:intergenic
AGAGAATGAGAAGAGAGAGA+AGG 0.640932 3:+79109810 MsG0380016096.01.T01:CDS
CGACTCATGATGCTGCTATG+GGG 0.649833 3:+79111662 MsG0380016096.01.T01:CDS
CCTTGGCCAAACTCTCAGCA+GGG 0.650031 3:-79109496 None:intergenic
GTTTGGAATGAAGATAGCAG+TGG 0.651237 3:+79111254 MsG0380016096.01.T01:CDS
AACTCGTATAAAATAATTCG+GGG 0.651846 3:-79109667 None:intergenic
CAGTAAATCAAAATCATTAG+GGG 0.671419 3:-79111231 None:intergenic
ACAATCGGAATGATCAAGTG+TGG 0.673503 3:+79111693 MsG0380016096.01.T01:CDS
TTGACAGGCATGTTGTCATG+AGG 0.677083 3:+79108814 MsG0380016096.01.T01:CDS
GTTGCGTTGAGAGGTGTGGG+TGG 0.687295 3:-79109014 None:intergenic
TCAAGAGAATGGGACTCACG+CGG 0.693646 3:-79109347 None:intergenic
CAACATGCCTGTCAAGAGTG+CGG 0.698613 3:-79108806 None:intergenic
AGAGAATGGGACTCACGCGG+AGG 0.722473 3:-79109344 None:intergenic
TTTAGCAAGTAATCCCGGTG+AGG 0.724164 3:-79109437 None:intergenic
ATCATAGACAGTAAGGAACG+AGG 0.740778 3:-79108948 None:intergenic
AAATCATTAGGGGATAACAG+AGG 0.758182 3:-79111221 None:intergenic
ACTTTGCCAGTAGTAACCGG+CGG 0.778731 3:-79109172 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCAATGTATTTTTTTTA+TGG + Chr3:79110441-79110460 MsG0380016096.01.T01:intron 10.0%
!! CTGAGTTATAAATAAAAAAA+GGG - Chr3:79110637-79110656 None:intergenic 15.0%
!! AAACTCGTATAAAATAATTC+GGG - Chr3:79109671-79109690 None:intergenic 20.0%
!! AACTATTAAATCAAGAGAAT+GGG - Chr3:79109360-79109379 None:intergenic 20.0%
!! ATAGAAATACACATATCAAA+AGG + Chr3:79110509-79110528 MsG0380016096.01.T01:intron 20.0%
!! ATTTCTTGATTATGAAATGA+AGG - Chr3:79111093-79111112 None:intergenic 20.0%
!! CAAACTCGTATAAAATAATT+CGG - Chr3:79109672-79109691 None:intergenic 20.0%
!! GATAGTAAACAATTCAAAAA+TGG - Chr3:79108988-79109007 None:intergenic 20.0%
!! GCTGAGTTATAAATAAAAAA+AGG - Chr3:79110638-79110657 None:intergenic 20.0%
!!! AATTTTCATACGTTAAGTAA+AGG + Chr3:79110164-79110183 MsG0380016096.01.T01:intron 20.0%
!!! ATTAGTCTCTAAAATTCTTA+AGG + Chr3:79110970-79110989 MsG0380016096.01.T01:CDS 20.0%
!!! ATTTTAGAGACTAATTTATC+CGG - Chr3:79110965-79110984 None:intergenic 20.0%
!!! TATTTTATACGAGTTTGAAA+GGG + Chr3:79109675-79109694 MsG0380016096.01.T01:CDS 20.0%
!!! TTATTTTATACGAGTTTGAA+AGG + Chr3:79109674-79109693 MsG0380016096.01.T01:CDS 20.0%
!!! TTGAAACAGATAGATTTTTA+AGG - Chr3:79108755-79108774 None:intergenic 20.0%
!!! TTTTTAAGGTTACATGTTTT+TGG - Chr3:79108741-79108760 None:intergenic 20.0%
! AACTCGTATAAAATAATTCG+GGG - Chr3:79109670-79109689 None:intergenic 25.0%
! AATGCAAAATTGCTCTATTT+AGG + Chr3:79110573-79110592 MsG0380016096.01.T01:intron 25.0%
! ACCAGTAAATCAAAATCATT+AGG - Chr3:79111236-79111255 None:intergenic 25.0%
! ATAATCAATATCACTGTCAT+CGG - Chr3:79109888-79109907 None:intergenic 25.0%
! ATCATTCCTCTCAATTTATT+TGG - Chr3:79109638-79109657 None:intergenic 25.0%
! ATTTATAACTCAGCATATAC+AGG + Chr3:79110644-79110663 MsG0380016096.01.T01:intron 25.0%
! CAACTATTAAATCAAGAGAA+TGG - Chr3:79109361-79109380 None:intergenic 25.0%
! CACCAACATAGATAAATTAA+AGG - Chr3:79110915-79110934 None:intergenic 25.0%
! CAGTAAATCAAAATCATTAG+GGG - Chr3:79111234-79111253 None:intergenic 25.0%
! CCAGTAAATCAAAATCATTA+GGG - Chr3:79111235-79111254 None:intergenic 25.0%
! GTAAACAATTCAAAAATGGA+TGG - Chr3:79108984-79109003 None:intergenic 25.0%
! GTACCATATTATGATTATGA+TGG + Chr3:79110230-79110249 MsG0380016096.01.T01:intron 25.0%
! TAAAATTCTGTCCAAATGTA+GGG + Chr3:79108905-79108924 MsG0380016096.01.T01:CDS 25.0%
! TCATTCCTCTCAATTTATTT+GGG - Chr3:79109637-79109656 None:intergenic 25.0%
! TCTCCATCATAATCATAATA+TGG - Chr3:79110236-79110255 None:intergenic 25.0%
! TGAATAAAAAGTTGAAGTCT+TGG - Chr3:79110842-79110861 None:intergenic 25.0%
! TTAAAATTCTGTCCAAATGT+AGG + Chr3:79108904-79108923 MsG0380016096.01.T01:CDS 25.0%
! TTCAAAGATGATTATGATGA+TGG + Chr3:79109932-79109951 MsG0380016096.01.T01:CDS 25.0%
! TTTGTACTTGTACATATTGA+AGG + Chr3:79110358-79110377 MsG0380016096.01.T01:intron 25.0%
!! AAATGTTTCTGTTTCTTCTA+TGG + Chr3:79110871-79110890 MsG0380016096.01.T01:intron 25.0%
!! AATGTTTCTGTTTCTTCTAT+GGG + Chr3:79110872-79110891 MsG0380016096.01.T01:intron 25.0%
!! AGCCTTTAATTTATCTATGT+TGG + Chr3:79110910-79110929 MsG0380016096.01.T01:intron 25.0%
!! GAAACAGAGAATAATTTTGT+TGG - Chr3:79111169-79111188 None:intergenic 25.0%
!! GATAGCAATTAATTGTCTTT+TGG + Chr3:79110392-79110411 MsG0380016096.01.T01:intron 25.0%
!! TAAATAGAGCAATTTTGCAT+TGG - Chr3:79110574-79110593 None:intergenic 25.0%
!! TATCTATGTTGGTGAAATAA+GGG + Chr3:79110921-79110940 MsG0380016096.01.T01:intron 25.0%
!! TCAACTTTTTATTCAAACCA+TGG + Chr3:79110847-79110866 MsG0380016096.01.T01:intron 25.0%
!! TTAATCGGAAGAAAATGTTT+TGG - Chr3:79108888-79108907 None:intergenic 25.0%
!! TTATCTATGTTGGTGAAATA+AGG + Chr3:79110920-79110939 MsG0380016096.01.T01:intron 25.0%
!! TTTTCCAATTCAAAATGGTT+CGG + Chr3:79110096-79110115 MsG0380016096.01.T01:intron 25.0%
!!! ATGATTTTGATTTACTGGTT+TGG + Chr3:79111237-79111256 MsG0380016096.01.T01:CDS 25.0%
!!! CATTTGGACAGAATTTTAAT+CGG - Chr3:79108903-79108922 None:intergenic 25.0%
!!! TTTTAGCCTTACAAGATAAA+TGG + Chr3:79109765-79109784 MsG0380016096.01.T01:CDS 25.0%
AAACAATTGAGACTTCGAAA+GGG + Chr3:79109398-79109417 MsG0380016096.01.T01:CDS 30.0%
AATCAGCTTATAGATTGATG+AGG + Chr3:79111291-79111310 MsG0380016096.01.T01:CDS 30.0%
AATCATAATATGGTACATGC+AGG - Chr3:79110226-79110245 None:intergenic 30.0%
ATCGTCTATTTCAACAGTAT+TGG + Chr3:79109112-79109131 MsG0380016096.01.T01:CDS 30.0%
ATTGTTTGAACTTCAAAGGT+CGG - Chr3:79109385-79109404 None:intergenic 30.0%
CAGAGATATTTCAATATTGC+AGG + Chr3:79111593-79111612 MsG0380016096.01.T01:CDS 30.0%
CTATTCACAGAAAAAGATGA+AGG - Chr3:79108714-79108733 None:intergenic 30.0%
CTCAATTGTTTGAACTTCAA+AGG - Chr3:79109389-79109408 None:intergenic 30.0%
CTTAACTTTGACAATTACCA+GGG - Chr3:79110139-79110158 None:intergenic 30.0%
GCTAGGATTGATAAAGAATT+TGG + Chr3:79109836-79109855 MsG0380016096.01.T01:CDS 30.0%
TAATCAATATCACTGTCATC+GGG - Chr3:79109887-79109906 None:intergenic 30.0%
TCAATGATCTTGAATTTGTC+TGG - Chr3:79109263-79109282 None:intergenic 30.0%
TCTTAACTTTGACAATTACC+AGG - Chr3:79110140-79110159 None:intergenic 30.0%
TGAGGATATATTTGAAGACT+TGG + Chr3:79109997-79110016 MsG0380016096.01.T01:CDS 30.0%
TTATTCTCTGTTTCATCCTT+TGG + Chr3:79111175-79111194 MsG0380016096.01.T01:CDS 30.0%
TTCATACGTTAAGTAAAGGT+TGG + Chr3:79110168-79110187 MsG0380016096.01.T01:intron 30.0%
TTGAATTGTTTACTATCCCA+TGG + Chr3:79108991-79109010 MsG0380016096.01.T01:CDS 30.0%
TTGGAATGACAATTGAAAAG+AGG + Chr3:79109567-79109586 MsG0380016096.01.T01:CDS 30.0%
TTGGTTTAGAGAATTAGTAG+AGG + Chr3:79111401-79111420 MsG0380016096.01.T01:intron 30.0%
! ACAACAAGATTGGAGAATTT+TGG + Chr3:79110062-79110081 MsG0380016096.01.T01:CDS 30.0%
! CAAACTACTCATTTGTTGAA+CGG + Chr3:79111005-79111024 MsG0380016096.01.T01:CDS 30.0%
! GAACCATTTTGAATTGGAAA+AGG - Chr3:79110097-79110116 None:intergenic 30.0%
! GAATTTTTGATCTGGCAAAA+GGG + Chr3:79110194-79110213 MsG0380016096.01.T01:intron 30.0%
! GATTTGTTTGACAACAAGAT+TGG + Chr3:79110052-79110071 MsG0380016096.01.T01:CDS 30.0%
! GTTGGAATGAATTTTTGATC+TGG + Chr3:79110186-79110205 MsG0380016096.01.T01:intron 30.0%
! TGAATTTTTGATCTGGCAAA+AGG + Chr3:79110193-79110212 MsG0380016096.01.T01:intron 30.0%
! TTTTCAGCTTTTGAACAAAC+CGG - Chr3:79108848-79108867 None:intergenic 30.0%
!! TCTCTAAAATTCTTAAGGCT+AGG + Chr3:79110975-79110994 MsG0380016096.01.T01:CDS 30.0%
!!! AGGTACCGAATGAATATTTT+TGG - Chr3:79111204-79111223 None:intergenic 30.0%
!!! CCCTAATGATTTTGATTTAC+TGG + Chr3:79111232-79111251 MsG0380016096.01.T01:CDS 30.0%
!!! TGATTATGATGATGGTTTTG+AGG + Chr3:79109979-79109998 MsG0380016096.01.T01:CDS 30.0%
AAATCATTAGGGGATAACAG+AGG - Chr3:79111224-79111243 None:intergenic 35.0%
AACAATTGAGACTTCGAAAG+GGG + Chr3:79109399-79109418 MsG0380016096.01.T01:CDS 35.0%
AAGATCATTGACACTTCCTA+TGG + Chr3:79109272-79109291 MsG0380016096.01.T01:CDS 35.0%
AATTAATTGCTATCGAGTGG+TGG - Chr3:79110386-79110405 None:intergenic 35.0%
AATTGAGAGGAATGATTGTG+AGG + Chr3:79109642-79109661 MsG0380016096.01.T01:CDS 35.0%
ACCAAATTCCTAACCTTTGA+CGG - Chr3:79111386-79111405 None:intergenic 35.0%
AGAAACAGAAACATTTGCCA+TGG - Chr3:79110867-79110886 None:intergenic 35.0%
AGATAGCAGTGGAATATACT+TGG + Chr3:79111265-79111284 MsG0380016096.01.T01:CDS 35.0%
AGCCTTACAAGATAAATGGA+TGG + Chr3:79109769-79109788 MsG0380016096.01.T01:CDS 35.0%
CAAAAATGGATGGATATCGA+TGG - Chr3:79108974-79108993 None:intergenic 35.0%
CAAACAATTGAGACTTCGAA+AGG + Chr3:79109397-79109416 MsG0380016096.01.T01:CDS 35.0%
CAAACTTTAGCAAGTAATCC+CGG - Chr3:79109445-79109464 None:intergenic 35.0%
CCTTTCTTAGTCAGCAATAA+CGG + Chr3:79108645-79108664 MsG0380016096.01.T01:CDS 35.0%
CGTTCAACAAATGAGTAGTT+TGG - Chr3:79111007-79111026 None:intergenic 35.0%
GAAAGGGGCTTAATTTAAAG+AGG + Chr3:79109414-79109433 MsG0380016096.01.T01:CDS 35.0%
GACAATTAATTGCTATCGAG+TGG - Chr3:79110389-79110408 None:intergenic 35.0%
GATTGATGAGGAGATTTATG+TGG + Chr3:79111303-79111322 MsG0380016096.01.T01:CDS 35.0%
GGATTGATAAAGAATTTGGC+AGG + Chr3:79109840-79109859 MsG0380016096.01.T01:CDS 35.0%
GGTGGCCAAAAATATTCATT+CGG + Chr3:79111196-79111215 MsG0380016096.01.T01:CDS 35.0%
GTAAAAGTGAGAAAGTTCAG+AGG + Chr3:79110333-79110352 MsG0380016096.01.T01:intron 35.0%
GTCCATCCATTTATCTTGTA+AGG - Chr3:79109774-79109793 None:intergenic 35.0%
TAACTTATTGGAGAAGGATG+AGG + Chr3:79109742-79109761 MsG0380016096.01.T01:CDS 35.0%
TAAGTTGTGACTCTTGCATT+AGG + Chr3:79110684-79110703 MsG0380016096.01.T01:intron 35.0%
TATAACTTAGTTGCGTTGAG+AGG - Chr3:79109026-79109045 None:intergenic 35.0%
TATCTTAACATGTGCCTTGA+GGG - Chr3:79110483-79110502 None:intergenic 35.0%
TATGAAGGATCCATGGTTAA+GGG + Chr3:79111043-79111062 MsG0380016096.01.T01:intron 35.0%
TATGCATGTGAGTGATCTAA+TGG + Chr3:79111119-79111138 MsG0380016096.01.T01:intron 35.0%
TATGTCGGTCAAAGTTATGA+AGG + Chr3:79111028-79111047 MsG0380016096.01.T01:intron 35.0%
TCAAAGTTATGAAGGATCCA+TGG + Chr3:79111036-79111055 MsG0380016096.01.T01:intron 35.0%
TCATTAAGCTTCTTCTGCAT+CGG - Chr3:79111434-79111453 None:intergenic 35.0%
TGAAAGATAAGCCCTACATT+TGG - Chr3:79108919-79108938 None:intergenic 35.0%
TGATCTTGAATTTGTCTGGA+TGG - Chr3:79109259-79109278 None:intergenic 35.0%
TGATGAGAAGGGTAACTTAT+TGG + Chr3:79109730-79109749 MsG0380016096.01.T01:CDS 35.0%
TTAATTTAAAGAGGCCTCAC+CGG + Chr3:79109423-79109442 MsG0380016096.01.T01:CDS 35.0%
TTATGAAGGATCCATGGTTA+AGG + Chr3:79111042-79111061 MsG0380016096.01.T01:intron 35.0%
TTCCGTGTGATTTGAGTATT+CGG + Chr3:79111525-79111544 MsG0380016096.01.T01:intron 35.0%
TTTATGGTCAGTCTATTCTG+TGG + Chr3:79110770-79110789 MsG0380016096.01.T01:intron 35.0%
! ACAAGATAAATGGATGGACT+TGG + Chr3:79109775-79109794 MsG0380016096.01.T01:CDS 35.0%
! ATGTTGTGCTGTTATAAGAG+AGG + Chr3:79109541-79109560 MsG0380016096.01.T01:CDS 35.0%
! CTATCCGAACCATTTTGAAT+TGG - Chr3:79110103-79110122 None:intergenic 35.0%
! GAGATAGCATAAGAAGCTTT+TGG - Chr3:79109148-79109167 None:intergenic 35.0%
! GGACCTTTTCCAATTCAAAA+TGG + Chr3:79110091-79110110 MsG0380016096.01.T01:CDS 35.0%
! TATTGCTGACTAAGAAAGGA+TGG - Chr3:79108644-79108663 None:intergenic 35.0%
! TCATTTGTTGAACGGTATGT+CGG + Chr3:79111013-79111032 MsG0380016096.01.T01:intron 35.0%
! TTCCTCCTAATTTTAGATCC+CGG + Chr3:79109222-79109241 MsG0380016096.01.T01:CDS 35.0%
! TTCTGCTTCAATTGATTCCT+TGG - Chr3:79109516-79109535 None:intergenic 35.0%
!! TCCAAACTCCTTTCTGAAAT+GGG - Chr3:79109612-79109631 None:intergenic 35.0%
!!! TGAATATTTTTGGCCACCAA+AGG - Chr3:79111194-79111213 None:intergenic 35.0%
!!! TGACTCGAACTGTTGTTTTA+TGG + Chr3:79110754-79110773 MsG0380016096.01.T01:intron 35.0%
AATGAGAAGAGAGAGAAGGA+AGG + Chr3:79109814-79109833 MsG0380016096.01.T01:CDS 40.0%
ACAATCGGAATGATCAAGTG+TGG + Chr3:79111693-79111712 MsG0380016096.01.T01:CDS 40.0%
ACCCATTTCAGAAAGGAGTT+TGG + Chr3:79109608-79109627 MsG0380016096.01.T01:CDS 40.0%
ACGAAGAAAAGTGGAACTGA+GGG - Chr3:79108682-79108701 None:intergenic 40.0%
AGAGAATGAGAAGAGAGAGA+AGG + Chr3:79109810-79109829 MsG0380016096.01.T01:CDS 40.0%
AGTAGAGCGATTTGATGAGA+AGG + Chr3:79109718-79109737 MsG0380016096.01.T01:CDS 40.0%
ATAATATGGTACATGCAGGC+TGG - Chr3:79110222-79110241 None:intergenic 40.0%
ATACGAGTTTGAAAGGGCAA+AGG + Chr3:79109681-79109700 MsG0380016096.01.T01:CDS 40.0%
ATCATAGACAGTAAGGAACG+AGG - Chr3:79108951-79108970 None:intergenic 40.0%
ATCATCAAGAGGAGAAAAGG+AGG - Chr3:79110724-79110743 None:intergenic 40.0%
ATGGAGATATTGCTCTATGC+TGG + Chr3:79110249-79110268 MsG0380016096.01.T01:intron 40.0%
CCAAATTCCTAACCTTTGAC+GGG - Chr3:79111385-79111404 None:intergenic 40.0%
CTTATGTGTTCTTGATGGAG+TGG + Chr3:79111754-79111773 MsG0380016096.01.T01:CDS 40.0%
CTTCTCTCGAGCATATATCA+AGG - Chr3:79111625-79111644 None:intergenic 40.0%
CTTGCATTAGGCTTATCTAC+AGG + Chr3:79110696-79110715 MsG0380016096.01.T01:intron 40.0%
GAAGAGAAGTTTCAGCAAGA+GGG + Chr3:79111329-79111348 MsG0380016096.01.T01:CDS 40.0%
GAAGGGTAACTTATTGGAGA+AGG + Chr3:79109736-79109755 MsG0380016096.01.T01:CDS 40.0%
GCTGTTATAAGAGAGGTTCT+TGG + Chr3:79109548-79109567 MsG0380016096.01.T01:CDS 40.0%
GGACTCCCAAATAAATTGAG+AGG + Chr3:79109629-79109648 MsG0380016096.01.T01:CDS 40.0%
GTAGAGCGATTTGATGAGAA+GGG + Chr3:79109719-79109738 MsG0380016096.01.T01:CDS 40.0%
GTATCTTAACATGTGCCTTG+AGG - Chr3:79110484-79110503 None:intergenic 40.0%
GTCAAACGAACACATAGTTG+AGG - Chr3:79109050-79109069 None:intergenic 40.0%
GTGAGTGATCTAATGGTTCA+AGG + Chr3:79111126-79111145 MsG0380016096.01.T01:intron 40.0%
TAATTTAAAGAGGCCTCACC+GGG + Chr3:79109424-79109443 MsG0380016096.01.T01:CDS 40.0%
TACGAGTTTGAAAGGGCAAA+GGG + Chr3:79109682-79109701 MsG0380016096.01.T01:CDS 40.0%
TCGATGGATCATAGACAGTA+AGG - Chr3:79108958-79108977 None:intergenic 40.0%
TCTCAGCAGGGTTGTTATAA+GGG - Chr3:79109487-79109506 None:intergenic 40.0%
TCTCATCAAATCGCTCTACT+AGG - Chr3:79109718-79109737 None:intergenic 40.0%
TCTCTCTCTTCTCATTCTCT+TGG - Chr3:79109810-79109829 None:intergenic 40.0%
TGAAGAGAAGTTTCAGCAAG+AGG + Chr3:79111328-79111347 MsG0380016096.01.T01:CDS 40.0%
TGCATCATCAAGAGGAGAAA+AGG - Chr3:79110727-79110746 None:intergenic 40.0%
TGTCAAACAAATCGTTTCCC+AGG - Chr3:79110045-79110064 None:intergenic 40.0%
TGTTGTTCCACGAAGAAAAG+TGG - Chr3:79108691-79108710 None:intergenic 40.0%
TTCTCTGTTTCATCCTTTGG+TGG + Chr3:79111178-79111197 MsG0380016096.01.T01:CDS 40.0%
TTGCTTAACATGTGCCCTAA+GGG + Chr3:79110596-79110615 MsG0380016096.01.T01:intron 40.0%
TTGTCATGAGGAACAGAATC+CGG + Chr3:79108826-79108845 MsG0380016096.01.T01:CDS 40.0%
! AACCGGGATCTAAAATTAGG+AGG - Chr3:79109227-79109246 None:intergenic 40.0%
! ATTGGAGAATTTTGGACTGC+AGG + Chr3:79110070-79110089 MsG0380016096.01.T01:CDS 40.0%
! CACAACCGGGATCTAAAATT+AGG - Chr3:79109230-79109249 None:intergenic 40.0%
! CCGTTATTGCTGACTAAGAA+AGG - Chr3:79108648-79108667 None:intergenic 40.0%
! CTATGTTGGTGAAATAAGGG+TGG + Chr3:79110924-79110943 MsG0380016096.01.T01:intron 40.0%
! GTCCAAACTCCTTTCTGAAA+TGG - Chr3:79109613-79109632 None:intergenic 40.0%
! GTTTGGAATGAAGATAGCAG+TGG + Chr3:79111254-79111273 MsG0380016096.01.T01:CDS 40.0%
! TTGTTATAAGGGCACACTTC+TGG - Chr3:79109476-79109495 None:intergenic 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + Chr3:79110466-79110485 MsG0380016096.01.T01:intron 40.0%
!! AGAAGCATTGCATCATCAAG+AGG - Chr3:79110735-79110754 None:intergenic 40.0%
!! CATGTTAACTTGTGCCCTTA+GGG - Chr3:79110613-79110632 None:intergenic 40.0%
!! TCATGTTAACTTGTGCCCTT+AGG - Chr3:79110614-79110633 None:intergenic 40.0%
!!! AGACTTGGATTTTGAAGCTG+AGG + Chr3:79110012-79110031 MsG0380016096.01.T01:CDS 40.0%
AATCTGCTGTGCATCTGTGA+TGG - Chr3:79111724-79111743 None:intergenic 45.0%
AGGTAAAGGCTTTGCCAAGT+TGG - Chr3:79109327-79109346 None:intergenic 45.0%
ATAGAGAACAGAAGCAACCC+TGG + Chr3:79110119-79110138 MsG0380016096.01.T01:intron 45.0%
CAATTCCTCAACTGCAAGTG+CGG - Chr3:79109084-79109103 None:intergenic 45.0%
CACGAAGAAAAGTGGAACTG+AGG - Chr3:79108683-79108702 None:intergenic 45.0%
CCAACTTTGCCAGTAGTAAC+CGG - Chr3:79109178-79109197 None:intergenic 45.0%
CCACTTGACCCATTTCAGAA+AGG + Chr3:79109601-79109620 MsG0380016096.01.T01:CDS 45.0%
CCCGTCAAAGGTTAGGAATT+TGG + Chr3:79111382-79111401 MsG0380016096.01.T01:intron 45.0%
CGCCGAATACTCAAATCACA+CGG - Chr3:79111530-79111549 None:intergenic 45.0%
CGGTGCTTATGTGTTCTTGA+TGG + Chr3:79111749-79111768 MsG0380016096.01.T01:CDS 45.0%
CTCGAGAGAAGTTGTTGATG+TGG + Chr3:79111634-79111653 MsG0380016096.01.T01:CDS 45.0%
CTCTCAGCAGGGTTGTTATA+AGG - Chr3:79109488-79109507 None:intergenic 45.0%
GAAGCTGAGGATTATGACCT+GGG + Chr3:79110025-79110044 MsG0380016096.01.T01:CDS 45.0%
GAATGTGAATGTCCCGTCAA+AGG + Chr3:79111370-79111389 MsG0380016096.01.T01:CDS 45.0%
GATCTAATGGTTCAAGGCCA+AGG + Chr3:79111132-79111151 MsG0380016096.01.T01:intron 45.0%
GATGCACAGCAGATTTGCAT+CGG + Chr3:79111729-79111748 MsG0380016096.01.T01:CDS 45.0%
GTGATTTGAGTATTCGGCGT+TGG + Chr3:79111531-79111550 MsG0380016096.01.T01:intron 45.0%
GTGGAACTGAGGGAATTTAC+CGG - Chr3:79108672-79108691 None:intergenic 45.0%
GTGGAATATCATGAGCAAGC+CGG + Chr3:79110943-79110962 MsG0380016096.01.T01:CDS 45.0%
GTTGCTTAACATGTGCCCTA+AGG + Chr3:79110595-79110614 MsG0380016096.01.T01:intron 45.0%
TAACAACCCTGCTGAGAGTT+TGG + Chr3:79109490-79109509 MsG0380016096.01.T01:CDS 45.0%
TCGACTCATGATGCTGCTAT+GGG + Chr3:79111661-79111680 MsG0380016096.01.T01:CDS 45.0%
TGAAGCTGAGGATTATGACC+TGG + Chr3:79110024-79110043 MsG0380016096.01.T01:CDS 45.0%
TGAATGTCCCGTCAAAGGTT+AGG + Chr3:79111375-79111394 MsG0380016096.01.T01:intron 45.0%
TGTATCGTGCGATACCAACT+TGG + Chr3:79109310-79109329 MsG0380016096.01.T01:CDS 45.0%
TTAGGAGGAAGACCAAGATC+AGG - Chr3:79109212-79109231 None:intergenic 45.0%
TTGACAGGCATGTTGTCATG+AGG + Chr3:79108814-79108833 MsG0380016096.01.T01:CDS 45.0%
TTTAGCAAGTAATCCCGGTG+AGG - Chr3:79109440-79109459 None:intergenic 45.0%
TTTGAAAGGGCAAAGGGACT+CGG + Chr3:79109688-79109707 MsG0380016096.01.T01:CDS 45.0%
! ATAAATGGATGGACTTGGCG+AGG + Chr3:79109780-79109799 MsG0380016096.01.T01:CDS 45.0%
! TAAATGGATGGACTTGGCGA+GGG + Chr3:79109781-79109800 MsG0380016096.01.T01:CDS 45.0%
! TATGGGGCATTTGGCACAAT+CGG + Chr3:79111678-79111697 MsG0380016096.01.T01:CDS 45.0%
! TTAGTTGCGTTGAGAGGTGT+GGG - Chr3:79109020-79109039 None:intergenic 45.0%
!! CCTTTCTGAAATGGGTCAAG+TGG - Chr3:79109604-79109623 None:intergenic 45.0%
!! CTCAGTTCCACTTTTCTTCG+TGG + Chr3:79108681-79108700 MsG0380016096.01.T01:CDS 45.0%
!! CTTAGTCAGCAATAACGGAC+CGG + Chr3:79108650-79108669 MsG0380016096.01.T01:CDS 45.0%
AAGCTCAAGTGCACGTCCAT+AGG - Chr3:79109291-79109310 None:intergenic 50.0%
ACTTTGCCAGTAGTAACCGG+CGG - Chr3:79109175-79109194 None:intergenic 50.0%
AGGGCGATTGGAATATGGTG+TGG + Chr3:79111348-79111367 MsG0380016096.01.T01:CDS 50.0%
AGTTTCAGCAAGAGGGCGAT+TGG + Chr3:79111336-79111355 MsG0380016096.01.T01:CDS 50.0%
CAACATGCCTGTCAAGAGTG+CGG - Chr3:79108809-79108828 None:intergenic 50.0%
CATCATGTACCTTGCCCATC+AGG + Chr3:79111455-79111474 MsG0380016096.01.T01:intron 50.0%
CCGGTTACTACTGGCAAAGT+TGG + Chr3:79109175-79109194 MsG0380016096.01.T01:CDS 50.0%
CGACTCATGATGCTGCTATG+GGG + Chr3:79111662-79111681 MsG0380016096.01.T01:CDS 50.0%
CTCGACTCATGATGCTGCTA+TGG + Chr3:79111660-79111679 MsG0380016096.01.T01:CDS 50.0%
CTCTCATGCACCCTTAACCA+TGG - Chr3:79111056-79111075 None:intergenic 50.0%
CTGGATGGTCATTGCACAAC+CGG - Chr3:79109244-79109263 None:intergenic 50.0%
CTTAGTTGCGTTGAGAGGTG+TGG - Chr3:79109021-79109040 None:intergenic 50.0%
GAAGACCAAGATCAGGAGCA+AGG - Chr3:79109205-79109224 None:intergenic 50.0%
GAAGAGAGAGAAGGAAGGCT+AGG + Chr3:79109819-79109838 MsG0380016096.01.T01:CDS 50.0%
GCAAGAGGGCGATTGGAATA+TGG + Chr3:79111343-79111362 MsG0380016096.01.T01:CDS 50.0%
GGTGCATGAGAGTAGGTAGT+TGG + Chr3:79111064-79111083 MsG0380016096.01.T01:intron 50.0%
GTTCACCTTGCTCCTGATCT+TGG + Chr3:79109197-79109216 MsG0380016096.01.T01:CDS 50.0%
TCAAGAGAATGGGACTCACG+CGG - Chr3:79109350-79109369 None:intergenic 50.0%
TGCATAACGCGCAACCTGAT+GGG - Chr3:79111472-79111491 None:intergenic 50.0%
TGGATGGTCATTGCACAACC+GGG - Chr3:79109243-79109262 None:intergenic 50.0%
TGTTGGCAACCCAAACACCT+TGG - Chr3:79111152-79111171 None:intergenic 50.0%
TTATGCTATCTCCTCACCGC+CGG + Chr3:79109156-79109175 MsG0380016096.01.T01:CDS 50.0%
! ATCAGGTTGCGCGTTATGCA+CGG + Chr3:79111472-79111491 MsG0380016096.01.T01:intron 50.0%
! GGTTAAGGGTGCATGAGAGT+AGG + Chr3:79111057-79111076 MsG0380016096.01.T01:intron 50.0%
! GGTTCAAGGCCAAGGTGTTT+GGG + Chr3:79111140-79111159 MsG0380016096.01.T01:intron 50.0%
! TGATGCTGCTATGGGGCATT+TGG + Chr3:79111669-79111688 MsG0380016096.01.T01:CDS 50.0%
! TGGTTCAAGGCCAAGGTGTT+TGG + Chr3:79111139-79111158 MsG0380016096.01.T01:intron 50.0%
!! TATTCGGCGTTGGCAAGAAG+CGG + Chr3:79111541-79111560 MsG0380016096.01.T01:intron 50.0%
CCTTGGCCAAACTCTCAGCA+GGG - Chr3:79109499-79109518 None:intergenic 55.0%
GGACTGTGTCATGCTGTGCA+GGG + Chr3:79111563-79111582 MsG0380016096.01.T01:intron 55.0%
GTGCATAACGCGCAACCTGA+TGG - Chr3:79111473-79111492 None:intergenic 55.0%
TCCTTGGCCAAACTCTCAGC+AGG - Chr3:79109500-79109519 None:intergenic 55.0%
!! ATTCGGCGTTGGCAAGAAGC+GGG + Chr3:79111542-79111561 MsG0380016096.01.T01:intron 55.0%
AGAGAATGGGACTCACGCGG+AGG - Chr3:79109347-79109366 None:intergenic 60.0%
AGGTTGCGCGTTATGCACGG+AGG + Chr3:79111475-79111494 MsG0380016096.01.T01:intron 60.0%
CCCTGCTGAGAGTTTGGCCA+AGG + Chr3:79109496-79109515 MsG0380016096.01.T01:CDS 60.0%
GGGACTGTGTCATGCTGTGC+AGG + Chr3:79111562-79111581 MsG0380016096.01.T01:intron 60.0%
TGCAGCCGCACTTGCAGTTG+AGG + Chr3:79109076-79109095 MsG0380016096.01.T01:CDS 60.0%
TGGGACTCACGCGGAGGTAA+AGG - Chr3:79109341-79109360 None:intergenic 60.0%
TGTGTCATGCTGTGCAGGGC+AGG + Chr3:79111567-79111586 MsG0380016096.01.T01:intron 60.0%
TTCGCGACCGCACTCTTGAC+AGG + Chr3:79108799-79108818 MsG0380016096.01.T01:CDS 60.0%
TTGCGCGTTATGCACGGAGG+CGG + Chr3:79111478-79111497 MsG0380016096.01.T01:intron 60.0%
! AACGCGCAACCTGATGGGCA+AGG - Chr3:79111467-79111486 None:intergenic 60.0%
! GTTGCGTTGAGAGGTGTGGG+TGG - Chr3:79109017-79109036 None:intergenic 60.0%
! TCCTCACCGCCGGTTACTAC+TGG + Chr3:79109166-79109185 MsG0380016096.01.T01:CDS 60.0%
! TGAGAGGTGTGGGTGGCCAT+GGG - Chr3:79109010-79109029 None:intergenic 60.0%
! TTGAGAGGTGTGGGTGGCCA+TGG - Chr3:79109011-79109030 None:intergenic 60.0%
ACTGCAAGTGCGGCTGCAGC+TGG - Chr3:79109074-79109093 None:intergenic 65.0%
GCCAGTAGTAACCGGCGGTG+AGG - Chr3:79109170-79109189 None:intergenic 65.0%
CGCGTTATGCACGGAGGCGG+AGG + Chr3:79111481-79111500 MsG0380016096.01.T01:intron 70.0%
!! CGGAGGCGGAGGAGAGCGTT+TGG + Chr3:79111492-79111511 MsG0380016096.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 79108630 79111802 79108630 ID=MsG0380016096.01;Name=MsG0380016096.01
Chr3 mRNA 79108630 79111802 79108630 ID=MsG0380016096.01.T01;Parent=MsG0380016096.01;Name=MsG0380016096.01.T01;_AED=0.31;_eAED=0.32;_QI=0|0|0|1|1|1|4|0|674
Chr3 exon 79108630 79110112 79108630 ID=MsG0380016096.01.T01:exon:17777;Parent=MsG0380016096.01.T01
Chr3 exon 79110942 79111026 79110942 ID=MsG0380016096.01.T01:exon:17778;Parent=MsG0380016096.01.T01
Chr3 exon 79111154 79111391 79111154 ID=MsG0380016096.01.T01:exon:17779;Parent=MsG0380016096.01.T01
Chr3 exon 79111584 79111802 79111584 ID=MsG0380016096.01.T01:exon:17780;Parent=MsG0380016096.01.T01
Chr3 CDS 79108630 79110112 79108630 ID=MsG0380016096.01.T01:cds;Parent=MsG0380016096.01.T01
Chr3 CDS 79110942 79111026 79110942 ID=MsG0380016096.01.T01:cds;Parent=MsG0380016096.01.T01
Chr3 CDS 79111154 79111391 79111154 ID=MsG0380016096.01.T01:cds;Parent=MsG0380016096.01.T01
Chr3 CDS 79111584 79111802 79111584 ID=MsG0380016096.01.T01:cds;Parent=MsG0380016096.01.T01
Gene Sequence

>MsG0380016096.01.T01

ATGGCATTGTGCCATCCTTTCTTAGTCAGCAATAACGGACCGGTAAATTCCCTCAGTTCCACTTTTCTTCGTGGAACAACACCTTCATCTTTTTCTGTGAATAGAAAACCAAAAACATGTAACCTTAAAAATCTATCTGTTTCAATTAGTTGTTCGTCTCTTAAAACTGTTCGCGACCGCACTCTTGACAGGCATGTTGTCATGAGGAACAGAATCCGGTTTGTTCAAAAGCTGAAAACTTTGCTTCTTTCTAAACCAAAACATTTTCTTCCGATTAAAATTCTGTCCAAATGTAGGGCTTATCTTTCACTTCATAAGCCTCGTTCCTTACTGTCTATGATCCATCGATATCCATCCATTTTTGAATTGTTTACTATCCCATGGCCACCCACACCTCTCAACGCAACTAAGTTATATCCTCAACTATGTGTTCGTTTGACTCCAGCTGCAGCCGCACTTGCAGTTGAGGAATTGAATCTTAAATCGTCTATTTCAACAGTATTGGCAAACAAACTCCAAAAGCTTCTTATGCTATCTCCTCACCGCCGGTTACTACTGGCAAAGTTGGTTCACCTTGCTCCTGATCTTGGTCTTCCTCCTAATTTTAGATCCCGGTTGTGCAATGACCATCCAGACAAATTCAAGATCATTGACACTTCCTATGGACGTGCACTTGAGCTTGTATCGTGCGATACCAACTTGGCAAAGCCTTTACCTCCGCGTGAGTCCCATTCTCTTGATTTAATAGTTGACCGACCTTTGAAGTTCAAACAATTGAGACTTCGAAAGGGGCTTAATTTAAAGAGGCCTCACCGGGATTACTTGCTAAAGTTTGAAGAAGTGCCAGAAGTGTGCCCTTATAACAACCCTGCTGAGAGTTTGGCCAAGGAATCAATTGAAGCAGAAAAGAGATGTTGTGCTGTTATAAGAGAGGTTCTTGGAATGACAATTGAAAAGAGGACATTAATAGACCACTTGACCCATTTCAGAAAGGAGTTTGGACTCCCAAATAAATTGAGAGGAATGATTGTGAGGCACCCCGAATTATTTTATACGAGTTTGAAAGGGCAAAGGGACTCGGTTTTCCTAGTAGAGCGATTTGATGAGAAGGGTAACTTATTGGAGAAGGATGAGGTTTTAGCCTTACAAGATAAATGGATGGACTTGGCGAGGGAGTCCAAGAGAATGAGAAGAGAGAGAAGGAAGGCTAGGATTGATAAAGAATTTGGCAGGTTGAGTGATGTAAATCAAAATCCCGATGACAGTGATATTGATTATGATGATGATATTGAGATTGATAATTTCAAAGATGATTATGATGATGATATTGAGATTGATAATTTCAAAGATGATTATGATGATGGTTTTGAGGATATATTTGAAGACTTGGATTTTGAAGCTGAGGATTATGACCTGGGAAACGATTTGTTTGACAACAAGATTGGAGAATTTTGGACTGCAGGACCTTTTCCAATTCAAAATGGGTGGAATATCATGAGCAAGCCGGATAAATTAGTCTCTAAAATTCTTAAGGCTAGGTATTTTCCAAACTACTCATTTGTTGAACGGTGTTTGGGTTGCCAACAAAATTATTCTCTGTTTCATCCTTTGGTGGCCAAAAATATTCATTCGGTACCTCTGTTATCCCCTAATGATTTTGATTTACTGGTTTGGAATGAAGATAGCAGTGGAATATACTTGGTTAAATCAGCTTATAGATTGATGAGGAGATTTATGTGGAATGAAGAGAAGTTTCAGCAAGAGGGCGATTGGAATATGGTGTGGAATGTGAATGTCCCGTCAAAGGGCAGGATGCAGAGATATTTCAATATTGCAGGTGCGATCCTTGATATATGCTCGAGAGAAGTTGTTGATGTGGTTGCTCGACTCATGATGCTGCTATGGGGCATTTGGCACAATCGGAATGATCAAGTGTGGAATCACCATCACAGATGCACAGCAGATTTGCATCGGTGCTTATGTGTTCTTGATGGAGTGGATAGCTGCACAAGACGTGCATCATAG

Protein sequence

>MsG0380016096.01.T01

MALCHPFLVSNNGPVNSLSSTFLRGTTPSSFSVNRKPKTCNLKNLSVSISCSSLKTVRDRTLDRHVVMRNRIRFVQKLKTLLLSKPKHFLPIKILSKCRAYLSLHKPRSLLSMIHRYPSIFELFTIPWPPTPLNATKLYPQLCVRLTPAAAALAVEELNLKSSISTVLANKLQKLLMLSPHRRLLLAKLVHLAPDLGLPPNFRSRLCNDHPDKFKIIDTSYGRALELVSCDTNLAKPLPPRESHSLDLIVDRPLKFKQLRLRKGLNLKRPHRDYLLKFEEVPEVCPYNNPAESLAKESIEAEKRCCAVIREVLGMTIEKRTLIDHLTHFRKEFGLPNKLRGMIVRHPELFYTSLKGQRDSVFLVERFDEKGNLLEKDEVLALQDKWMDLARESKRMRRERRKARIDKEFGRLSDVNQNPDDSDIDYDDDIEIDNFKDDYDDDIEIDNFKDDYDDGFEDIFEDLDFEAEDYDLGNDLFDNKIGEFWTAGPFPIQNGWNIMSKPDKLVSKILKARYFPNYSFVERCLGCQQNYSLFHPLVAKNIHSVPLLSPNDFDLLVWNEDSSGIYLVKSAYRLMRRFMWNEEKFQQEGDWNMVWNVNVPSKGRMQRYFNIAGAILDICSREVVDVVARLMMLLWGIWHNRNDQVWNHHHRCTADLHRCLCVLDGVDSCTRRAS*