AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014907.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014907.01.T01 MTR_3g031380 95.000 380 19 0 1 380 1 380 0.0 724
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014907.01.T01 AT2G30200 81.105 344 64 1 38 380 50 393 0.0 557
MsG0380014907.01.T01 AT2G30200 80.405 296 57 1 38 332 50 345 2.19e-168 475

Find 124 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGCGTTTGCTGGGGCTTTC+AGG 0.094720 3:+62301739 MsG0380014907.01.T01:CDS
CAAGAAAGCCAATGAGATTT+TGG 0.134267 3:+62300114 MsG0380014907.01.T01:CDS
CTTCTTGATGTATGCATTAA+TGG 0.181932 3:+62300269 MsG0380014907.01.T01:CDS
GCATTCAAATGTTGGATTTA+TGG 0.185585 3:-62299695 None:intergenic
TTATTTCATCTAAAATTTAT+TGG 0.214877 3:-62303656 None:intergenic
TATACTGCTCTGGCGTTTGC+TGG 0.229112 3:+62301729 MsG0380014907.01.T01:CDS
CATTCAAATGTTGGATTTAT+GGG 0.229579 3:-62299694 None:intergenic
GTGGCGAAAACCCTAGATTT+AGG 0.242064 3:-62299858 None:intergenic
CAGGTGCGCCTGGCTGTTGC+AGG 0.273267 3:+62302841 MsG0380014907.01.T01:intron
GTGATCTAACTTATTCAAAA+TGG 0.282898 3:-62303553 None:intergenic
CGTAAACTTTCTACCTTTCC+AGG 0.283273 3:-62303177 None:intergenic
TAAGAGTGTGGGTTCGATTT+GGG 0.294147 3:-62299821 None:intergenic
CCCACAATTTCCCTAAATCT+AGG 0.310590 3:+62299847 MsG0380014907.01.T01:CDS
CCTTACTGGACATAGGTAAT+TGG 0.315959 3:-62302564 None:intergenic
CTTTGAAGATGGACTGAAAT+TGG 0.319783 3:+62302282 MsG0380014907.01.T01:CDS
TGCAATATTGTAGTTTGTAT+TGG 0.335872 3:-62303391 None:intergenic
AGCTTCAGGCACTTCCTGAT+TGG 0.338484 3:-62302525 None:intergenic
GCTGTCTCTGGAGGCATAAA+AGG 0.342232 3:+62302694 MsG0380014907.01.T01:CDS
ATCTGAACCTTCTCAGCTTC+AGG 0.348175 3:-62302539 None:intergenic
AATATCTTCTTTATTGTGTC+AGG 0.351899 3:-62302988 None:intergenic
TGGAAATGACTGGTATTCTT+GGG 0.360068 3:-62302939 None:intergenic
CTCATGGTGGCAGGTGCGCC+TGG 0.360470 3:+62302831 MsG0380014907.01.T01:intron
TGCTGCTGTTGAGCTACTTC+GGG 0.360693 3:+62301641 MsG0380014907.01.T01:CDS
TTCTTGATGTATGCATTAAT+GGG 0.361976 3:+62300270 MsG0380014907.01.T01:CDS
TTGGAAATGACTGGTATTCT+TGG 0.363800 3:-62302940 None:intergenic
TGGACTCTTCAGGTTATTGC+TGG 0.367068 3:+62303275 MsG0380014907.01.T01:intron
TCGGAGCTTAAGAAGTTTGC+AGG 0.367846 3:+62303339 MsG0380014907.01.T01:exon
GCTGAAGAAAAGCTATGAAT+TGG 0.370795 3:+62303152 MsG0380014907.01.T01:CDS
GTTCGATTTGGGAAGAAGAT+AGG 0.378013 3:-62299810 None:intergenic
TTAAGAGTGTGGGTTCGATT+TGG 0.379313 3:-62299822 None:intergenic
ACTGTTGTTTCCCATTGAAC+AGG 0.383548 3:-62303108 None:intergenic
CCCTAGATTTAGGGAAATTG+TGG 0.390240 3:-62299848 None:intergenic
TGGCGAAAACCCTAGATTTA+GGG 0.391319 3:-62299857 None:intergenic
TTATTCAAAATGGAACCTAT+TGG 0.401232 3:-62303543 None:intergenic
CAGGTTCCATAAAACTAGTA+TGG 0.401234 3:-62302870 None:intergenic
TGCTGGAATTGTCAAAAGAA+TGG 0.402849 3:+62303292 MsG0380014907.01.T01:CDS
ATACTGCTCTGGCGTTTGCT+GGG 0.405436 3:+62301730 MsG0380014907.01.T01:CDS
TGCGTTTCTCTTCCCTGGTC+AGG 0.406940 3:+62299944 MsG0380014907.01.T01:CDS
TGACACAATAAAGAAGATAT+TGG 0.409601 3:+62302990 MsG0380014907.01.T01:CDS
GAAATGTTGCATTCAAATGT+TGG 0.410318 3:-62299703 None:intergenic
AAAGAAGATATTGGCACAAC+AGG 0.412880 3:+62302999 MsG0380014907.01.T01:CDS
GTTTCATGTGGTTTGAGCTT+AGG 0.423256 3:+62301702 MsG0380014907.01.T01:CDS
TTGCTGCTGTTGAGCTACTT+CGG 0.426896 3:+62301640 MsG0380014907.01.T01:CDS
CAGCAAGACTTGTGACATAC+AGG 0.430360 3:-62301623 None:intergenic
GTTGTGTGATGCAGCCAATC+AGG 0.434474 3:+62302511 MsG0380014907.01.T01:CDS
TTCGATTTGGGAAGAAGATA+GGG 0.435124 3:-62299809 None:intergenic
TCCAATGCGTTTCTCTTCCC+TGG 0.436188 3:+62299939 MsG0380014907.01.T01:CDS
GACTGAAATTGGTGAAACTA+AGG 0.439212 3:+62302293 MsG0380014907.01.T01:CDS
AGGTTACTTACCCTGTTCAA+TGG 0.439364 3:+62303097 MsG0380014907.01.T01:intron
TGGCTGCATCACACAACTGC+TGG 0.441780 3:-62302505 None:intergenic
AGCCTTGAAAGACTTCGCTT+TGG 0.442255 3:-62302734 None:intergenic
AGAAGAAGACATTGTAGAGA+TGG 0.442899 3:-62299766 None:intergenic
CCACAATTTCCCTAAATCTA+GGG 0.450894 3:+62299848 MsG0380014907.01.T01:CDS
TGGGAAGAAGATAGGGGAAA+AGG 0.451850 3:-62299802 None:intergenic
TTCAAAATGGAACCTATTGG+TGG 0.458831 3:-62303540 None:intergenic
TAAATACCCCAAAATCTCAT+TGG 0.463483 3:-62300122 None:intergenic
TGTTGGTTGAAAATTTGAAA+TGG 0.463497 3:+62303680 MsG0380014907.01.T01:three_prime_UTR
GGTTACTTACCCTGTTCAAT+GGG 0.466160 3:+62303098 MsG0380014907.01.T01:intron
TAGGGAAACTATGCTGTCTC+TGG 0.470485 3:+62302682 MsG0380014907.01.T01:intron
CCTAGATTTAGGGAAATTGT+GGG 0.484174 3:-62299847 None:intergenic
GCTTCTAATCTTGACACTGC+AGG 0.490629 3:-62302889 None:intergenic
AGCTACAGAAGCTTCATGAA+TGG 0.493766 3:-62299904 None:intergenic
GAAGAAGATAGGGGAAAAGG+AGG 0.505154 3:-62299799 None:intergenic
CTGAAGAAAAGCTATGAATT+GGG 0.506499 3:+62303153 MsG0380014907.01.T01:CDS
AGCCAAAGCGAAGTCTTTCA+AGG 0.506804 3:+62302732 MsG0380014907.01.T01:CDS
GGAAAGCGCCTGCAACAGCC+AGG 0.507270 3:-62302849 None:intergenic
CTATGAATTGGGACCTGGAA+AGG 0.507524 3:+62303164 MsG0380014907.01.T01:CDS
GGTGCACAAGCTGTTGGAAT+GGG 0.510482 3:+62300052 MsG0380014907.01.T01:CDS
CGATTTGTAAGCTTTGAAGA+TGG 0.513263 3:+62302271 MsG0380014907.01.T01:intron
TGCGGAAAATATACCTGACC+AGG 0.515702 3:-62299957 None:intergenic
CTTAGGAGAGTATACTGCTC+TGG 0.517475 3:+62301719 MsG0380014907.01.T01:CDS
GAATTCAACAGTTATCAGTC+AGG 0.518626 3:+62300307 MsG0380014907.01.T01:CDS
ACTAAGGGGTGAAGCCATGC+AGG 0.520103 3:+62302309 MsG0380014907.01.T01:CDS
GCATTTACGTTGGAAATGAC+TGG 0.530559 3:-62302949 None:intergenic
TCTTGGGGTTCTAATGTCTG+TGG 0.536650 3:-62302923 None:intergenic
TGAGCTACTTCGGGCACGTG+AGG 0.538884 3:+62301650 MsG0380014907.01.T01:CDS
GGAAGTGCCTGAAGCTGAGA+AGG 0.545626 3:+62302532 MsG0380014907.01.T01:CDS
AAGAAGATAGGGGAAAAGGA+GGG 0.546836 3:-62299798 None:intergenic
TCGATTTGGGAAGAAGATAG+GGG 0.547419 3:-62299808 None:intergenic
GGAAATGACTGGTATTCTTG+GGG 0.548400 3:-62302938 None:intergenic
TACTGCTCTGGCGTTTGCTG+GGG 0.549969 3:+62301731 MsG0380014907.01.T01:CDS
TTGAAAATTTGAAATGGCAA+TGG 0.553034 3:+62303686 MsG0380014907.01.T01:three_prime_UTR
AAAAGCTATGAATTGGGACC+TGG 0.554297 3:+62303159 MsG0380014907.01.T01:CDS
CATGGTTAGTGTGGTAGGAC+TGG 0.554574 3:+62302469 MsG0380014907.01.T01:CDS
GGTGCCATGGTTAGTGTGGT+AGG 0.555350 3:+62302464 MsG0380014907.01.T01:CDS
ACCAGGGAAGAGAAACGCAT+TGG 0.557047 3:-62299940 None:intergenic
TTGCTATGTGTGTGCCTGTG+TGG 0.560697 3:+62303365 MsG0380014907.01.T01:three_prime_UTR
CATAAAAGGAATAGAAGTGG+TGG 0.563259 3:+62302708 MsG0380014907.01.T01:CDS
GTGAAGACTCTTCTATCCAA+GGG 0.563734 3:+62303129 MsG0380014907.01.T01:CDS
TTGTACAAAACTGCAGCAGA+AGG 0.572446 3:-62300094 None:intergenic
CTGTTGTTTCCCATTGAACA+GGG 0.572523 3:-62303107 None:intergenic
GAGCTACTTCGGGCACGTGA+GGG 0.576524 3:+62301651 MsG0380014907.01.T01:CDS
GATTCTGTTGATGTTTCATG+TGG 0.577223 3:+62301690 MsG0380014907.01.T01:CDS
CTACTTCGGGCACGTGAGGG+AGG 0.580356 3:+62301654 MsG0380014907.01.T01:CDS
GTTTGTATTGGAAGCCACAC+AGG 0.583503 3:-62303379 None:intergenic
AGTGAAGACTCTTCTATCCA+AGG 0.584582 3:+62303128 MsG0380014907.01.T01:CDS
ATTGTGTCAGGATCTGTATG+TGG 0.585678 3:-62302976 None:intergenic
GGGTGCACAAGCTGTTGGAA+TGG 0.590984 3:+62300051 MsG0380014907.01.T01:intron
TTGAGATCCAGTGGAGATGG+TGG 0.593982 3:-62299877 None:intergenic
GAAGTCTTTCAAGGCTCGAA+TGG 0.594481 3:+62302741 MsG0380014907.01.T01:CDS
TCAAGAACCTTACTGGACAT+AGG 0.602304 3:-62302571 None:intergenic
TAAAGGTGCCATGGTTAGTG+TGG 0.602685 3:+62302460 MsG0380014907.01.T01:CDS
AATGGAAGATTGAGATCCAG+TGG 0.603030 3:-62299886 None:intergenic
TTGTAGGGTGCACAAGCTGT+TGG 0.608275 3:+62300046 MsG0380014907.01.T01:intron
GATGCTGCTGATGCTACTAA+AGG 0.624615 3:+62302443 MsG0380014907.01.T01:CDS
AGACTTGTGACATACAGGGC+AGG 0.626537 3:-62301618 None:intergenic
GGAAACTATGCTGTCTCTGG+AGG 0.631276 3:+62302685 MsG0380014907.01.T01:CDS
AGATTGAGATCCAGTGGAGA+TGG 0.632101 3:-62299880 None:intergenic
GGTAGGACTGGACTCAGAGA+AGG 0.637373 3:+62302481 MsG0380014907.01.T01:CDS
TGATGCTACTAAAGGTGCCA+TGG 0.641755 3:+62302451 MsG0380014907.01.T01:CDS
AGCAAGACTTGTGACATACA+GGG 0.652472 3:-62301622 None:intergenic
ACTACCACAGATTACCTGCA+TGG 0.656968 3:-62302323 None:intergenic
GCTAAATCAAAGAGAAACAC+GGG 0.660284 3:+62303443 MsG0380014907.01.T01:three_prime_UTR
CAGTCCTACCACACTAACCA+TGG 0.663013 3:-62302468 None:intergenic
TGTATGCATTAATGGGCCGA+AGG 0.664486 3:+62300277 MsG0380014907.01.T01:CDS
GGTGCTGATATTGAAAACAT+CGG 0.665514 3:+62303320 MsG0380014907.01.T01:CDS
AGCTAAATCAAAGAGAAACA+CGG 0.666440 3:+62303442 MsG0380014907.01.T01:three_prime_UTR
CTGAAATTGGTGAAACTAAG+GGG 0.669315 3:+62302295 MsG0380014907.01.T01:CDS
AGGCATAAAAGGAATAGAAG+TGG 0.682105 3:+62302705 MsG0380014907.01.T01:CDS
ATTGTCAAAAGAATGGACAA+AGG 0.682335 3:+62303299 MsG0380014907.01.T01:CDS
ACTGAAATTGGTGAAACTAA+GGG 0.694892 3:+62302294 MsG0380014907.01.T01:CDS
GCGGAAAATATACCTGACCA+GGG 0.695587 3:-62299956 None:intergenic
TGAAGACTCTTCTATCCAAG+GGG 0.710603 3:+62303130 MsG0380014907.01.T01:CDS
ATGTGGCAGAGCATTTACGT+TGG 0.714429 3:-62302959 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAAAATATGTAATTA+TGG + Chr3:62301900-62301919 MsG0380014907.01.T01:intron 10.0%
!!! TTATTTCATCTAAAATTTAT+TGG - Chr3:62303659-62303678 None:intergenic 10.0%
!! ATAAAAAAAACTTCTACTAT+TGG + Chr3:62300788-62300807 MsG0380014907.01.T01:intron 15.0%
!! TTTATAAACAACAAATTTCA+TGG - Chr3:62301550-62301569 None:intergenic 15.0%
!!! AAATTGACTGTATTATATTT+TGG + Chr3:62302659-62302678 MsG0380014907.01.T01:intron 15.0%
!!! ATGAAATTTGTTGTTTATAA+AGG + Chr3:62301549-62301568 MsG0380014907.01.T01:intron 15.0%
!!! ATTTTAGATGAAATAATTGT+TGG + Chr3:62303663-62303682 MsG0380014907.01.T01:three_prime_UTR 15.0%
!!! GTTTAAATTACAACTATTTT+TGG + Chr3:62300193-62300212 MsG0380014907.01.T01:intron 15.0%
!!! TTTTTTTTTTTTTGGTTCAA+GGG + Chr3:62300150-62300169 MsG0380014907.01.T01:intron 15.0%
!!! TTTTTTTTTTTTTTGGTTCA+AGG + Chr3:62300149-62300168 MsG0380014907.01.T01:intron 15.0%
!! AAGTACAAAAATAATGACAT+TGG - Chr3:62300561-62300580 None:intergenic 20.0%
!! ACAAATCGAATTAAATACAT+GGG - Chr3:62302259-62302278 None:intergenic 20.0%
!! TACAAATCGAATTAAATACA+TGG - Chr3:62302260-62302279 None:intergenic 20.0%
!! TTCTTTATGATATGAAGAAA+CGG + Chr3:62300434-62300453 MsG0380014907.01.T01:intron 20.0%
!! TTTAGTATAAATGACAATCA+AGG + Chr3:62300342-62300361 MsG0380014907.01.T01:intron 20.0%
!!! AACATGGTAATCAATTTTTT+TGG - Chr3:62301810-62301829 None:intergenic 20.0%
!!! AGTTTTTTTAACTTCAAAAC+TGG - Chr3:62303516-62303535 None:intergenic 20.0%
!!! ATTTGATTTGATTTGATTGT+AGG + Chr3:62300030-62300049 MsG0380014907.01.T01:intron 20.0%
!!! CAATGAATTTTGATTGAAAT+TGG + Chr3:62299996-62300015 MsG0380014907.01.T01:intron 20.0%
!!! TTGTTTTGTATTATGTACTT+AGG + Chr3:62300240-62300259 MsG0380014907.01.T01:intron 20.0%
!!! TTTGATTTGATTTGATTGTA+GGG + Chr3:62300031-62300050 MsG0380014907.01.T01:intron 20.0%
!!! TTTTTTGGACAAAAAATACA+TGG - Chr3:62301795-62301814 None:intergenic 20.0%
!!! TTTTTTTTTTTTGGTTCAAG+GGG + Chr3:62300151-62300170 MsG0380014907.01.T01:intron 20.0%
! AAAAAACTTAATCCACCAAT+AGG + Chr3:62303528-62303547 MsG0380014907.01.T01:three_prime_UTR 25.0%
! AAACTTTAAATGACTCATAC+TGG - Chr3:62302002-62302021 None:intergenic 25.0%
! AAATTACATATATGCCTCTA+TGG - Chr3:62301575-62301594 None:intergenic 25.0%
! AATATCTTCTTTATTGTGTC+AGG - Chr3:62302991-62303010 None:intergenic 25.0%
! ACAAAAATAATGACATTGGA+TGG - Chr3:62300557-62300576 None:intergenic 25.0%
! AGATAAATGCTCTCTTATTA+GGG - Chr3:62301295-62301314 None:intergenic 25.0%
! AGTCATTACAATCTAGTAAA+TGG + Chr3:62302040-62302059 MsG0380014907.01.T01:intron 25.0%
! ATCTCAAATATTCCTAAACT+GGG - Chr3:62300586-62300605 None:intergenic 25.0%
! CAAATATTTCTTGAAACGTT+GGG - Chr3:62301878-62301897 None:intergenic 25.0%
! CATTCAAATGTTGGATTTAT+GGG - Chr3:62299697-62299716 None:intergenic 25.0%
! GGAATAAAAAGAGAATAAAG+AGG + Chr3:62301459-62301478 MsG0380014907.01.T01:intron 25.0%
! GTGATCTAACTTATTCAAAA+TGG - Chr3:62303556-62303575 None:intergenic 25.0%
! GTTAACATTATCAACGAAAT+AGG + Chr3:62301349-62301368 MsG0380014907.01.T01:intron 25.0%
! TAGAGATGGAAAAAGAATAA+GGG - Chr3:62299755-62299774 None:intergenic 25.0%
! TAGCAGAATTATAAAACTAG+AGG - Chr3:62303241-62303260 None:intergenic 25.0%
! TCAAATATTTCTTGAAACGT+TGG - Chr3:62301879-62301898 None:intergenic 25.0%
! TGACACAATAAAGAAGATAT+TGG + Chr3:62302990-62303009 MsG0380014907.01.T01:CDS 25.0%
! TGTAAATCAAGACAAAAAAG+TGG - Chr3:62302227-62302246 None:intergenic 25.0%
! TTATTCAAAATGGAACCTAT+TGG - Chr3:62303546-62303565 None:intergenic 25.0%
! TTCTTGATGTATGCATTAAT+GGG + Chr3:62300270-62300289 MsG0380014907.01.T01:CDS 25.0%
! TTGTTATAATAGTTCCAGTT+GGG - Chr3:62301210-62301229 None:intergenic 25.0%
! TTTAATGTAACAGAAGTCTA+AGG - Chr3:62300902-62300921 None:intergenic 25.0%
!! CTCTGTAATCATGATTTTAA+AGG + Chr3:62301438-62301457 MsG0380014907.01.T01:intron 25.0%
!! TAGAAACAAAATTTTGCCTA+AGG - Chr3:62302615-62302634 None:intergenic 25.0%
!! TGCAATATTGTAGTTTGTAT+TGG - Chr3:62303394-62303413 None:intergenic 25.0%
!! TGTTGGTTGAAAATTTGAAA+TGG + Chr3:62303680-62303699 MsG0380014907.01.T01:three_prime_UTR 25.0%
!! TTGAAAATTTGAAATGGCAA+TGG + Chr3:62303686-62303705 MsG0380014907.01.T01:three_prime_UTR 25.0%
!!! AATATGAGTTGGTTTGTAAT+CGG + Chr3:62301063-62301082 MsG0380014907.01.T01:intron 25.0%
!!! ATTTTGATTGAAATTGGAAC+TGG + Chr3:62300002-62300021 MsG0380014907.01.T01:intron 25.0%
!!! CTGCTAACTTTTATTTTATC+TGG + Chr3:62303255-62303274 MsG0380014907.01.T01:intron 25.0%
!!! CTTTAAAATCATGATTACAG+AGG - Chr3:62301440-62301459 None:intergenic 25.0%
!!! GACTGTATTATATTTTGGTA+GGG + Chr3:62302664-62302683 MsG0380014907.01.T01:intron 25.0%
!!! TCAAGGTTGTTATTTTATTG+AGG + Chr3:62300359-62300378 MsG0380014907.01.T01:intron 25.0%
!!! TGACTGTATTATATTTTGGT+AGG + Chr3:62302663-62302682 MsG0380014907.01.T01:intron 25.0%
!!! TTTTGATTGAAATTGGAACT+GGG + Chr3:62300003-62300022 MsG0380014907.01.T01:intron 25.0%
AATTCTACTGTCATGGTAAA+AGG - Chr3:62301935-62301954 None:intergenic 30.0%
AATTGCACTTCTAATGCAAT+TGG + Chr3:62303073-62303092 MsG0380014907.01.T01:intron 30.0%
ACAATTAGAAGTTGAATCAC+TGG + Chr3:62301113-62301132 MsG0380014907.01.T01:intron 30.0%
ACTGAAATTGGTGAAACTAA+GGG + Chr3:62302294-62302313 MsG0380014907.01.T01:CDS 30.0%
AGCTAAATCAAAGAGAAACA+CGG + Chr3:62303442-62303461 MsG0380014907.01.T01:three_prime_UTR 30.0%
ATACCATCTATGAGAAGTTT+AGG + Chr3:62302079-62302098 MsG0380014907.01.T01:intron 30.0%
ATATGTAATTATGGCGTATG+TGG + Chr3:62301909-62301928 MsG0380014907.01.T01:intron 30.0%
ATCATCTATACTTGATCAAC+AGG - Chr3:62301010-62301029 None:intergenic 30.0%
ATTGTCAAAAGAATGGACAA+AGG + Chr3:62303299-62303318 MsG0380014907.01.T01:CDS 30.0%
CAACTCATATTACACTGTTA+TGG - Chr3:62301054-62301073 None:intergenic 30.0%
CAGTTTAGGAATATTTGAGA+TGG + Chr3:62300585-62300604 MsG0380014907.01.T01:intron 30.0%
CATAACAGTGTAATATGAGT+TGG + Chr3:62301052-62301071 MsG0380014907.01.T01:intron 30.0%
CATCTCAAATATTCCTAAAC+TGG - Chr3:62300587-62300606 None:intergenic 30.0%
CTGAAGAAAAGCTATGAATT+GGG + Chr3:62303153-62303172 MsG0380014907.01.T01:CDS 30.0%
CTTCTTGATGTATGCATTAA+TGG + Chr3:62300269-62300288 MsG0380014907.01.T01:CDS 30.0%
GAAATGTTGCATTCAAATGT+TGG - Chr3:62299706-62299725 None:intergenic 30.0%
GAGATAAATGCTCTCTTATT+AGG - Chr3:62301296-62301315 None:intergenic 30.0%
GCATTCAAATGTTGGATTTA+TGG - Chr3:62299698-62299717 None:intergenic 30.0%
GGGAAAAATATGAAAAACAG+AGG - Chr3:62301858-62301877 None:intergenic 30.0%
GTAGAGATGGAAAAAGAATA+AGG - Chr3:62299756-62299775 None:intergenic 30.0%
GTTGTTATAATAGTTCCAGT+TGG - Chr3:62301211-62301230 None:intergenic 30.0%
TAAAATCATGATTACAGAGG+AGG - Chr3:62301437-62301456 None:intergenic 30.0%
TAAATACCCCAAAATCTCAT+TGG - Chr3:62300125-62300144 None:intergenic 30.0%
TATGCATTCTAGTGTAGAAA+AGG - Chr3:62301513-62301532 None:intergenic 30.0%
TCCATTTACAAACAACAGAA+AGG + Chr3:62300646-62300665 MsG0380014907.01.T01:intron 30.0%
TCTCAAATATTCCTAAACTG+GGG - Chr3:62300585-62300604 None:intergenic 30.0%
TTTACCATGACAGTAGAATT+AGG + Chr3:62301935-62301954 MsG0380014907.01.T01:intron 30.0%
! AAGAAAGCCAATGAGATTTT+GGG + Chr3:62300115-62300134 MsG0380014907.01.T01:CDS 30.0%
! AAGCCTTTTAATATTAGACG+GGG + Chr3:62301238-62301257 MsG0380014907.01.T01:intron 30.0%
! CAAGCCTTTTAATATTAGAC+GGG + Chr3:62301237-62301256 MsG0380014907.01.T01:intron 30.0%
! CCAAGCCTTTTAATATTAGA+CGG + Chr3:62301236-62301255 MsG0380014907.01.T01:intron 30.0%
! TCCTTTCTGTTGTTTGTAAA+TGG - Chr3:62300650-62300669 None:intergenic 30.0%
! TGGAAAAAGAATAAGGGTTT+TGG - Chr3:62299749-62299768 None:intergenic 30.0%
! TTAGTGTTATCGATTGTGAA+TGG + Chr3:62300479-62300498 MsG0380014907.01.T01:intron 30.0%
! TTTTCCTAATTCTACTGTCA+TGG - Chr3:62301942-62301961 None:intergenic 30.0%
!! GTTATTTTATTGAGGTGGAA+GGG + Chr3:62300367-62300386 MsG0380014907.01.T01:intron 30.0%
!! TATTTTAAGTGACCCAACTA+CGG + Chr3:62301971-62301990 MsG0380014907.01.T01:intron 30.0%
!! TTATTTTATCTGGACTCTTC+AGG + Chr3:62303265-62303284 MsG0380014907.01.T01:intron 30.0%
!!! AGGTTGTTATTTTATTGAGG+TGG + Chr3:62300362-62300381 MsG0380014907.01.T01:intron 30.0%
!!! TGTTATTTTATTGAGGTGGA+AGG + Chr3:62300366-62300385 MsG0380014907.01.T01:intron 30.0%
AAAGAAGATATTGGCACAAC+AGG + Chr3:62302999-62303018 MsG0380014907.01.T01:CDS 35.0%
ACTCTCAAGTCTCAAATTTC+TGG - Chr3:62300975-62300994 None:intergenic 35.0%
AGAAAGCAAAGAATCTGCAA+TGG + Chr3:62300503-62300522 MsG0380014907.01.T01:intron 35.0%
AGAAGAAGACATTGTAGAGA+TGG - Chr3:62299769-62299788 None:intergenic 35.0%
AGGCATAAAAGGAATAGAAG+TGG + Chr3:62302705-62302724 MsG0380014907.01.T01:CDS 35.0%
AGGCATTATTACTTTGCGAA+AGG - Chr3:62302807-62302826 None:intergenic 35.0%
ATAACATATCCTCAGTGTGT+TGG + Chr3:62300699-62300718 MsG0380014907.01.T01:intron 35.0%
ATTTATGTGCAAAACCACAC+AGG - Chr3:62302161-62302180 None:intergenic 35.0%
CAGGTTCCATAAAACTAGTA+TGG - Chr3:62302873-62302892 None:intergenic 35.0%
CATAAAAGGAATAGAAGTGG+TGG + Chr3:62302708-62302727 MsG0380014907.01.T01:CDS 35.0%
CATTATTACTTTGCGAAAGG+TGG - Chr3:62302804-62302823 None:intergenic 35.0%
CCACAATTTCCCTAAATCTA+GGG + Chr3:62299848-62299867 MsG0380014907.01.T01:CDS 35.0%
CCGTCTAATATTAAAAGGCT+TGG - Chr3:62301239-62301258 None:intergenic 35.0%
CCTAGATTTAGGGAAATTGT+GGG - Chr3:62299850-62299869 None:intergenic 35.0%
CTGAAATTGGTGAAACTAAG+GGG + Chr3:62302295-62302314 MsG0380014907.01.T01:CDS 35.0%
CTGCATGATGAAAAAATCAG+TGG - Chr3:62300625-62300644 None:intergenic 35.0%
GAATTCAACAGTTATCAGTC+AGG + Chr3:62300307-62300326 MsG0380014907.01.T01:CDS 35.0%
GACTGAAATTGGTGAAACTA+AGG + Chr3:62302293-62302312 MsG0380014907.01.T01:CDS 35.0%
GAGAAGCAGTAGAAAAAACA+TGG - Chr3:62301826-62301845 None:intergenic 35.0%
GATTCTGTTGATGTTTCATG+TGG + Chr3:62301690-62301709 MsG0380014907.01.T01:CDS 35.0%
GCTAAATCAAAGAGAAACAC+GGG + Chr3:62303443-62303462 MsG0380014907.01.T01:three_prime_UTR 35.0%
GCTATTATATTTCACCCAAC+TGG + Chr3:62301193-62301212 MsG0380014907.01.T01:intron 35.0%
GCTGAAGAAAAGCTATGAAT+TGG + Chr3:62303152-62303171 MsG0380014907.01.T01:CDS 35.0%
GGTCACTTAAAATATCCACT+TGG - Chr3:62301965-62301984 None:intergenic 35.0%
GTAACCATTGTTCTTTATCC+AGG + Chr3:62302421-62302440 MsG0380014907.01.T01:intron 35.0%
GTAGAATTAGGAAAACCAAG+TGG + Chr3:62301947-62301966 MsG0380014907.01.T01:intron 35.0%
GTTGTTTATAAAGGCCATAG+AGG + Chr3:62301558-62301577 MsG0380014907.01.T01:intron 35.0%
TAATGACATTGGATGGAATG+TGG - Chr3:62300550-62300569 None:intergenic 35.0%
TCCATTGAGATTCAAGAACA+CGG - Chr3:62303216-62303235 None:intergenic 35.0%
TGAAAAACAGAGGCAATGAA+AGG - Chr3:62301848-62301867 None:intergenic 35.0%
TGCTGGAATTGTCAAAAGAA+TGG + Chr3:62303292-62303311 MsG0380014907.01.T01:CDS 35.0%
TGGAAATGACTGGTATTCTT+GGG - Chr3:62302942-62302961 None:intergenic 35.0%
TGTTTATTCGCAATGCAATG+CGG - Chr3:62299978-62299997 None:intergenic 35.0%
TTCAAAATGGAACCTATTGG+TGG - Chr3:62303543-62303562 None:intergenic 35.0%
TTCAAGAACACGGATAGTAT+AGG - Chr3:62303206-62303225 None:intergenic 35.0%
TTGGAAATGACTGGTATTCT+TGG - Chr3:62302943-62302962 None:intergenic 35.0%
TTTATGTGCAAAACCACACA+GGG - Chr3:62302160-62302179 None:intergenic 35.0%
! AGAAAGCCAATGAGATTTTG+GGG + Chr3:62300116-62300135 MsG0380014907.01.T01:CDS 35.0%
! CAAGAAAGCCAATGAGATTT+TGG + Chr3:62300114-62300133 MsG0380014907.01.T01:CDS 35.0%
! CACACATTTTCTCGTGAAAA+AGG - Chr3:62303420-62303439 None:intergenic 35.0%
! GTAATAATGCCTTTTCCTCA+TGG + Chr3:62302815-62302834 MsG0380014907.01.T01:intron 35.0%
! GTTGAATTCAGCTTTTCCTT+CGG - Chr3:62300296-62300315 None:intergenic 35.0%
! TTTTGTACTTTCCCCAGTTT+AGG + Chr3:62300571-62300590 MsG0380014907.01.T01:intron 35.0%
!! ATTTTAAGTGACCCAACTAC+GGG + Chr3:62301972-62301991 MsG0380014907.01.T01:intron 35.0%
!! CGATTTGTAAGCTTTGAAGA+TGG + Chr3:62302271-62302290 MsG0380014907.01.T01:intron 35.0%
!! CTTTGAAGATGGACTGAAAT+TGG + Chr3:62302282-62302301 MsG0380014907.01.T01:CDS 35.0%
!! GGTGCTGATATTGAAAACAT+CGG + Chr3:62303320-62303339 MsG0380014907.01.T01:CDS 35.0%
!! GTGTGGTTTTGCACATAAAT+TGG + Chr3:62302161-62302180 MsG0380014907.01.T01:intron 35.0%
!! TTCGATTTGGGAAGAAGATA+GGG - Chr3:62299812-62299831 None:intergenic 35.0%
!!! AATTGTGGGTTTTAAGAGTG+TGG - Chr3:62299836-62299855 None:intergenic 35.0%
!!! ATCTGGCTTTTAACAACCTT+AGG + Chr3:62302596-62302615 MsG0380014907.01.T01:intron 35.0%
!!! ATTGTGGGTTTTAAGAGTGT+GGG - Chr3:62299835-62299854 None:intergenic 35.0%
!!! CGCTTTCCATACTAGTTTTA+TGG + Chr3:62302864-62302883 MsG0380014907.01.T01:CDS 35.0%
AAAAGCTATGAATTGGGACC+TGG + Chr3:62303159-62303178 MsG0380014907.01.T01:CDS 40.0%
AAGAAGATAGGGGAAAAGGA+GGG - Chr3:62299801-62299820 None:intergenic 40.0%
AAGGGTGGAGTGAAATTTAG+TGG + Chr3:62300385-62300404 MsG0380014907.01.T01:intron 40.0%
AATGGAAGATTGAGATCCAG+TGG - Chr3:62299889-62299908 None:intergenic 40.0%
AGCAAGACTTGTGACATACA+GGG - Chr3:62301625-62301644 None:intergenic 40.0%
AGCTACAGAAGCTTCATGAA+TGG - Chr3:62299907-62299926 None:intergenic 40.0%
AGGCCTAAACTTCTCATAGA+TGG - Chr3:62302085-62302104 None:intergenic 40.0%
AGGTTACTTACCCTGTTCAA+TGG + Chr3:62303097-62303116 MsG0380014907.01.T01:intron 40.0%
AGTGAAGACTCTTCTATCCA+AGG + Chr3:62303128-62303147 MsG0380014907.01.T01:CDS 40.0%
ATCATTCATCCAACACACTG+AGG - Chr3:62300711-62300730 None:intergenic 40.0%
ATGATTACAGAGGAGGTCTA+AGG - Chr3:62301430-62301449 None:intergenic 40.0%
ATGCTCTCTTATTAGGGAAC+TGG - Chr3:62301289-62301308 None:intergenic 40.0%
ATTGTGTCAGGATCTGTATG+TGG - Chr3:62302979-62302998 None:intergenic 40.0%
CAGCCCCGTCTAATATTAAA+AGG - Chr3:62301244-62301263 None:intergenic 40.0%
CCAATTACCTATGTCCAGTA+AGG + Chr3:62302564-62302583 MsG0380014907.01.T01:intron 40.0%
CCCACAATTTCCCTAAATCT+AGG + Chr3:62299847-62299866 MsG0380014907.01.T01:CDS 40.0%
CCCTAGATTTAGGGAAATTG+TGG - Chr3:62299851-62299870 None:intergenic 40.0%
CCTTACTGGACATAGGTAAT+TGG - Chr3:62302567-62302586 None:intergenic 40.0%
CGTAAACTTTCTACCTTTCC+AGG - Chr3:62303180-62303199 None:intergenic 40.0%
CTGACAAGCTGAAAACAAAC+AGG - Chr3:62302105-62302124 None:intergenic 40.0%
GAATCACTGGAAATCACTTC+TGG + Chr3:62301126-62301145 MsG0380014907.01.T01:intron 40.0%
GCATCCTGGATAAAGAACAA+TGG - Chr3:62302428-62302447 None:intergenic 40.0%
GCATTTACGTTGGAAATGAC+TGG - Chr3:62302952-62302971 None:intergenic 40.0%
GGAAATGACTGGTATTCTTG+GGG - Chr3:62302941-62302960 None:intergenic 40.0%
GGTTACTTACCCTGTTCAAT+GGG + Chr3:62303098-62303117 MsG0380014907.01.T01:intron 40.0%
GTGAAGACTCTTCTATCCAA+GGG + Chr3:62303129-62303148 MsG0380014907.01.T01:CDS 40.0%
GTTTCATGTGGTTTGAGCTT+AGG + Chr3:62301702-62301721 MsG0380014907.01.T01:CDS 40.0%
TATGTCCAGTAAGGTTCTTG+AGG + Chr3:62302573-62302592 MsG0380014907.01.T01:intron 40.0%
TCAAGAACCTTACTGGACAT+AGG - Chr3:62302574-62302593 None:intergenic 40.0%
TCCAACGCAAAAGACATAAG+TGG + Chr3:62303045-62303064 MsG0380014907.01.T01:intron 40.0%
TCCGTGTTCTTGAATCTCAA+TGG + Chr3:62303212-62303231 MsG0380014907.01.T01:intron 40.0%
TGAAGACTCTTCTATCCAAG+GGG + Chr3:62303130-62303149 MsG0380014907.01.T01:CDS 40.0%
TGGCGAAAACCCTAGATTTA+GGG - Chr3:62299860-62299879 None:intergenic 40.0%
TTGTACAAAACTGCAGCAGA+AGG - Chr3:62300097-62300116 None:intergenic 40.0%
! ACCACTTATGTCTTTTGCGT+TGG - Chr3:62303049-62303068 None:intergenic 40.0%
! ATAATGCCTTTTCCTCATGG+TGG + Chr3:62302818-62302837 MsG0380014907.01.T01:intron 40.0%
! ATTTTATTGAGGTGGAAGGG+TGG + Chr3:62300370-62300389 MsG0380014907.01.T01:intron 40.0%
! CTTTTAATATTAGACGGGGC+TGG + Chr3:62301242-62301261 MsG0380014907.01.T01:intron 40.0%
! TAAGAGTGTGGGTTCGATTT+GGG - Chr3:62299824-62299843 None:intergenic 40.0%
! TTAAGAGTGTGGGTTCGATT+TGG - Chr3:62299825-62299844 None:intergenic 40.0%
!! ACTGTTGTTTCCCATTGAAC+AGG - Chr3:62303111-62303130 None:intergenic 40.0%
!! CTGTTGTTTCCCATTGAACA+GGG - Chr3:62303110-62303129 None:intergenic 40.0%
!! GTTCGATTTGGGAAGAAGAT+AGG - Chr3:62299813-62299832 None:intergenic 40.0%
!! TCGATTTGGGAAGAAGATAG+GGG - Chr3:62299811-62299830 None:intergenic 40.0%
!! TTTTAAGTGACCCAACTACG+GGG + Chr3:62301973-62301992 MsG0380014907.01.T01:intron 40.0%
!!! GGGTTTTGTTACAGTGATGA+CGG - Chr3:62299677-62299696 None:intergenic 40.0%
!!! TTTTGTTACAGTGATGACGG+AGG - Chr3:62299674-62299693 None:intergenic 40.0%
ACTACCACAGATTACCTGCA+TGG - Chr3:62302326-62302345 None:intergenic 45.0%
AGATTGAGATCCAGTGGAGA+TGG - Chr3:62299883-62299902 None:intergenic 45.0%
AGCCAAAGCGAAGTCTTTCA+AGG + Chr3:62302732-62302751 MsG0380014907.01.T01:CDS 45.0%
AGCCTTGAAAGACTTCGCTT+TGG - Chr3:62302737-62302756 None:intergenic 45.0%
ATACTGGAAACCCCGTAGTT+GGG - Chr3:62301986-62302005 None:intergenic 45.0%
ATCTGAACCTTCTCAGCTTC+AGG - Chr3:62302542-62302561 None:intergenic 45.0%
ATTGGATGGAATGTGGTGCA+GGG - Chr3:62300543-62300562 None:intergenic 45.0%
CAGATCCTCAAGAACCTTAC+TGG - Chr3:62302581-62302600 None:intergenic 45.0%
CAGCAAGACTTGTGACATAC+AGG - Chr3:62301626-62301645 None:intergenic 45.0%
CAGTAAGGTTCTTGAGGATC+TGG + Chr3:62302579-62302598 MsG0380014907.01.T01:intron 45.0%
CTATGAATTGGGACCTGGAA+AGG + Chr3:62303164-62303183 MsG0380014907.01.T01:CDS 45.0%
GAAGAAGATAGGGGAAAAGG+AGG - Chr3:62299802-62299821 None:intergenic 45.0%
GAAGTCTTTCAAGGCTCGAA+TGG + Chr3:62302741-62302760 MsG0380014907.01.T01:CDS 45.0%
GATGCTGCTGATGCTACTAA+AGG + Chr3:62302443-62302462 MsG0380014907.01.T01:CDS 45.0%
GCACTTCTAATGCAATTGGC+AGG + Chr3:62303077-62303096 MsG0380014907.01.T01:intron 45.0%
GCGGAAAATATACCTGACCA+GGG - Chr3:62299959-62299978 None:intergenic 45.0%
GCTTCTAATCTTGACACTGC+AGG - Chr3:62302892-62302911 None:intergenic 45.0%
GCTTGTCAGCTTGTAGCATA+TGG + Chr3:62302116-62302135 MsG0380014907.01.T01:intron 45.0%
GGCTGAAGCAGAGAATTAGA+TGG - Chr3:62301600-62301619 None:intergenic 45.0%
GTGGCGAAAACCCTAGATTT+AGG - Chr3:62299861-62299880 None:intergenic 45.0%
GTTTGTATTGGAAGCCACAC+AGG - Chr3:62303382-62303401 None:intergenic 45.0%
TAGGGAAACTATGCTGTCTC+TGG + Chr3:62302682-62302701 MsG0380014907.01.T01:intron 45.0%
TATTGGCACAACAGGTATGC+AGG + Chr3:62303007-62303026 MsG0380014907.01.T01:intron 45.0%
TCACTGGAAATCACTTCTGG+TGG + Chr3:62301129-62301148 MsG0380014907.01.T01:intron 45.0%
TCGGAGCTTAAGAAGTTTGC+AGG + Chr3:62303339-62303358 MsG0380014907.01.T01:exon 45.0%
TGCGGAAAATATACCTGACC+AGG - Chr3:62299960-62299979 None:intergenic 45.0%
TGGGAAGAAGATAGGGGAAA+AGG - Chr3:62299805-62299824 None:intergenic 45.0%
TTGCTGCTGTTGAGCTACTT+CGG + Chr3:62301640-62301659 MsG0380014907.01.T01:CDS 45.0%
! ATAGCTTTTCTTCAGCCCCT+TGG - Chr3:62303148-62303167 None:intergenic 45.0%
! ATGTGGCAGAGCATTTACGT+TGG - Chr3:62302962-62302981 None:intergenic 45.0%
! CTTAGGAGAGTATACTGCTC+TGG + Chr3:62301719-62301738 MsG0380014907.01.T01:CDS 45.0%
! TCTTGGGGTTCTAATGTCTG+TGG - Chr3:62302926-62302945 None:intergenic 45.0%
! TGGACTCTTCAGGTTATTGC+TGG + Chr3:62303275-62303294 MsG0380014907.01.T01:intron 45.0%
! TGTATGCATTAATGGGCCGA+AGG + Chr3:62300277-62300296 MsG0380014907.01.T01:CDS 45.0%
!! GAAGAAGTATCTTCCCTGTG+TGG + Chr3:62302144-62302163 MsG0380014907.01.T01:intron 45.0%
!! TAAAGGTGCCATGGTTAGTG+TGG + Chr3:62302460-62302479 MsG0380014907.01.T01:CDS 45.0%
!! TGATGCTACTAAAGGTGCCA+TGG + Chr3:62302451-62302470 MsG0380014907.01.T01:CDS 45.0%
!!! GGTTTTGGAGAATGCGAGAA+TGG - Chr3:62299734-62299753 None:intergenic 45.0%
!!! TTAGTATTTTTTTTTTTTTT+TGG + Chr3:62300142-62300161 MsG0380014907.01.T01:intron 5.0%
ACCAGGGAAGAGAAACGCAT+TGG - Chr3:62299943-62299962 None:intergenic 50.0%
AGACTTGTGACATACAGGGC+AGG - Chr3:62301621-62301640 None:intergenic 50.0%
AGCTTCAGGCACTTCCTGAT+TGG - Chr3:62302528-62302547 None:intergenic 50.0%
ATACTGCTCTGGCGTTTGCT+GGG + Chr3:62301730-62301749 MsG0380014907.01.T01:CDS 50.0%
CAGTCCTACCACACTAACCA+TGG - Chr3:62302471-62302490 None:intergenic 50.0%
CATACTGGAAACCCCGTAGT+TGG - Chr3:62301987-62302006 None:intergenic 50.0%
CATGGTTAGTGTGGTAGGAC+TGG + Chr3:62302469-62302488 MsG0380014907.01.T01:CDS 50.0%
CATTGGATGGAATGTGGTGC+AGG - Chr3:62300544-62300563 None:intergenic 50.0%
GAAGCCATGCAGGTAATCTG+TGG + Chr3:62302319-62302338 MsG0380014907.01.T01:intron 50.0%
GGAAACTATGCTGTCTCTGG+AGG + Chr3:62302685-62302704 MsG0380014907.01.T01:CDS 50.0%
GGTGCACAAGCTGTTGGAAT+GGG + Chr3:62300052-62300071 MsG0380014907.01.T01:CDS 50.0%
GTGCTCAAGTGCAGACAATG+CGG - Chr3:62301387-62301406 None:intergenic 50.0%
GTTGTGTGATGCAGCCAATC+AGG + Chr3:62302511-62302530 MsG0380014907.01.T01:CDS 50.0%
TAGTAGCATCAGCAGCATCC+TGG - Chr3:62302442-62302461 None:intergenic 50.0%
TATACTGCTCTGGCGTTTGC+TGG + Chr3:62301729-62301748 MsG0380014907.01.T01:CDS 50.0%
TCCAATGCGTTTCTCTTCCC+TGG + Chr3:62299939-62299958 MsG0380014907.01.T01:CDS 50.0%
TGCTGCTGTTGAGCTACTTC+GGG + Chr3:62301641-62301660 MsG0380014907.01.T01:CDS 50.0%
TTGAGATCCAGTGGAGATGG+TGG - Chr3:62299880-62299899 None:intergenic 50.0%
TTGCTATGTGTGTGCCTGTG+TGG + Chr3:62303365-62303384 MsG0380014907.01.T01:three_prime_UTR 50.0%
TTGTAGGGTGCACAAGCTGT+TGG + Chr3:62300046-62300065 MsG0380014907.01.T01:intron 50.0%
! GCTGTCTCTGGAGGCATAAA+AGG + Chr3:62302694-62302713 MsG0380014907.01.T01:CDS 50.0%
! TACAGAGGAGGTCTAAGGTC+TGG - Chr3:62301425-62301444 None:intergenic 50.0%
AAGGTCTGGTGAGGAGGGAA+TGG - Chr3:62301411-62301430 None:intergenic 55.0%
ACTAAGGGGTGAAGCCATGC+AGG + Chr3:62302309-62302328 MsG0380014907.01.T01:CDS 55.0%
CACCTGCCACCATGAGGAAA+AGG - Chr3:62302827-62302846 None:intergenic 55.0%
GGGTGCACAAGCTGTTGGAA+TGG + Chr3:62300051-62300070 MsG0380014907.01.T01:intron 55.0%
GGTAGGACTGGACTCAGAGA+AGG + Chr3:62302481-62302500 MsG0380014907.01.T01:CDS 55.0%
TGCGTTTCTCTTCCCTGGTC+AGG + Chr3:62299944-62299963 MsG0380014907.01.T01:CDS 55.0%
TGGCTGCATCACACAACTGC+TGG - Chr3:62302508-62302527 None:intergenic 55.0%
! AGGAGGTCTAAGGTCTGGTG+AGG - Chr3:62301420-62301439 None:intergenic 55.0%
! AGGTCTAAGGTCTGGTGAGG+AGG - Chr3:62301417-62301436 None:intergenic 55.0%
! GGTCTAAGGTCTGGTGAGGA+GGG - Chr3:62301416-62301435 None:intergenic 55.0%
! GGTGCCATGGTTAGTGTGGT+AGG + Chr3:62302464-62302483 MsG0380014907.01.T01:CDS 55.0%
! GTTTTCGCCACCATCTCCAC+TGG + Chr3:62299870-62299889 MsG0380014907.01.T01:CDS 55.0%
! TACTGCTCTGGCGTTTGCTG+GGG + Chr3:62301731-62301750 MsG0380014907.01.T01:CDS 55.0%
! TGCCTTTTCCTCATGGTGGC+AGG + Chr3:62302822-62302841 MsG0380014907.01.T01:intron 55.0%
!! ATTAGACGGGGCTGGCTACA+TGG + Chr3:62301250-62301269 MsG0380014907.01.T01:intron 55.0%
!! GGAAGTGCCTGAAGCTGAGA+AGG + Chr3:62302532-62302551 MsG0380014907.01.T01:CDS 55.0%
GAGCTACTTCGGGCACGTGA+GGG + Chr3:62301651-62301670 MsG0380014907.01.T01:CDS 60.0%
TGAGCTACTTCGGGCACGTG+AGG + Chr3:62301650-62301669 MsG0380014907.01.T01:CDS 60.0%
! TGGCGTTTGCTGGGGCTTTC+AGG + Chr3:62301739-62301758 MsG0380014907.01.T01:CDS 60.0%
CTACTTCGGGCACGTGAGGG+AGG + Chr3:62301654-62301673 MsG0380014907.01.T01:CDS 65.0%
!! GGAAAGCGCCTGCAACAGCC+AGG - Chr3:62302852-62302871 None:intergenic 65.0%
CAGGCGCACCTGCCACCATG+AGG - Chr3:62302833-62302852 None:intergenic 70.0%
CAGGTGCGCCTGGCTGTTGC+AGG + Chr3:62302841-62302860 MsG0380014907.01.T01:intron 70.0%
CTCATGGTGGCAGGTGCGCC+TGG + Chr3:62302831-62302850 MsG0380014907.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr3 gene 62299652 62303729 62299652 ID=MsG0380014907.01;Name=MsG0380014907.01
Chr3 mRNA 62299652 62303729 62299652 ID=MsG0380014907.01.T01;Parent=MsG0380014907.01;Name=MsG0380014907.01.T01;_AED=0.46;_eAED=0.46;_QI=62|1|1|1|1|1|10|380|380
Chr3 exon 62299652 62299965 62299652 ID=MsG0380014907.01.T01:exon:29448;Parent=MsG0380014907.01.T01
Chr3 exon 62300052 62300137 62300052 ID=MsG0380014907.01.T01:exon:29449;Parent=MsG0380014907.01.T01
Chr3 exon 62300262 62300328 62300262 ID=MsG0380014907.01.T01:exon:29450;Parent=MsG0380014907.01.T01
Chr3 exon 62301618 62301760 62301618 ID=MsG0380014907.01.T01:exon:29451;Parent=MsG0380014907.01.T01
Chr3 exon 62302282 62302330 62302282 ID=MsG0380014907.01.T01:exon:29452;Parent=MsG0380014907.01.T01
Chr3 exon 62302443 62302580 62302443 ID=MsG0380014907.01.T01:exon:29453;Parent=MsG0380014907.01.T01
Chr3 exon 62302685 62302765 62302685 ID=MsG0380014907.01.T01:exon:29454;Parent=MsG0380014907.01.T01
Chr3 exon 62302844 62303020 62302844 ID=MsG0380014907.01.T01:exon:29455;Parent=MsG0380014907.01.T01
Chr3 exon 62303099 62303185 62303099 ID=MsG0380014907.01.T01:exon:29456;Parent=MsG0380014907.01.T01
Chr3 exon 62303287 62303729 62303287 ID=MsG0380014907.01.T01:exon:29457;Parent=MsG0380014907.01.T01
Chr3 five_prime_UTR 62299652 62299713 62299652 ID=MsG0380014907.01.T01:five_prime_utr;Parent=MsG0380014907.01.T01
Chr3 CDS 62299714 62299965 62299714 ID=MsG0380014907.01.T01:cds;Parent=MsG0380014907.01.T01
Chr3 CDS 62300052 62300137 62300052 ID=MsG0380014907.01.T01:cds;Parent=MsG0380014907.01.T01
Chr3 CDS 62300262 62300328 62300262 ID=MsG0380014907.01.T01:cds;Parent=MsG0380014907.01.T01
Chr3 CDS 62301618 62301760 62301618 ID=MsG0380014907.01.T01:cds;Parent=MsG0380014907.01.T01
Chr3 CDS 62302282 62302330 62302282 ID=MsG0380014907.01.T01:cds;Parent=MsG0380014907.01.T01
Chr3 CDS 62302443 62302580 62302443 ID=MsG0380014907.01.T01:cds;Parent=MsG0380014907.01.T01
Chr3 CDS 62302685 62302765 62302685 ID=MsG0380014907.01.T01:cds;Parent=MsG0380014907.01.T01
Chr3 CDS 62302844 62303020 62302844 ID=MsG0380014907.01.T01:cds;Parent=MsG0380014907.01.T01
Chr3 CDS 62303099 62303185 62303099 ID=MsG0380014907.01.T01:cds;Parent=MsG0380014907.01.T01
Chr3 CDS 62303287 62303349 62303287 ID=MsG0380014907.01.T01:cds;Parent=MsG0380014907.01.T01
Chr3 three_prime_UTR 62303350 62303729 62303350 ID=MsG0380014907.01.T01:three_prime_utr;Parent=MsG0380014907.01.T01
Gene Sequence

>MsG0380014907.01.T01

ATGCAACATTTCTTTCACCATTCTCGCATTCTCCAAAACCCTTATTCTTTTTCCATCTCTACAATGTCTTCTTCTCTCACTCTTCCCTCCTTTTCCCCTATCTTCTTCCCAAATCGAACCCACACTCTTAAAACCCACAATTTCCCTAAATCTAGGGTTTTCGCCACCATCTCCACTGGATCTCAATCTTCCATTCATGAAGCTTCTGTAGCTGATTATAAAGTATCCAATGCGTTTCTCTTCCCTGGTCAGGGTGCACAAGCTGTTGGAATGGGAAAAGAAGCTCAGAGTGTTCCTTCTGCTGCAGTTTTGTACAAGAAAGCCAATGAGATTTTGGGGTTTGATCTTCTTGATGTATGCATTAATGGGCCGAAGGAAAAGCTGAATTCAACAGTTATCAGTCAGCCTGCCCTGTATGTCACAAGTCTTGCTGCTGTTGAGCTACTTCGGGCACGTGAGGGAGGTGAGCAGATTATTGATTCTGTTGATGTTTCATGTGGTTTGAGCTTAGGAGAGTATACTGCTCTGGCGTTTGCTGGGGCTTTCAGCTTTGAAGATGGACTGAAATTGGTGAAACTAAGGGGTGAAGCCATGCAGGATGCTGCTGATGCTACTAAAGGTGCCATGGTTAGTGTGGTAGGACTGGACTCAGAGAAGGTCCAGCAGTTGTGTGATGCAGCCAATCAGGAAGTGCCTGAAGCTGAGAAGGTTCAGATTGCCAATTACCTATGTCCAGGAAACTATGCTGTCTCTGGAGGCATAAAAGGAATAGAAGTGGTGGAAGCCAAAGCGAAGTCTTTCAAGGCTCGAATGGCTGTGCGCCTGGCTGTTGCAGGCGCTTTCCATACTAGTTTTATGGAACCTGCAGTGTCAAGATTAGAAGCAGCATTAGCATCCACAGACATTAGAACCCCAAGAATACCAGTCATTTCCAACGTAAATGCTCTGCCACATACAGATCCTGACACAATAAAGAAGATATTGGCACAACAGGTTACTTACCCTGTTCAATGGGAAACAACAGTGAAGACTCTTCTATCCAAGGGGCTGAAGAAAAGCTATGAATTGGGACCTGGAAAGGTTATTGCTGGAATTGTCAAAAGAATGGACAAAGGTGCTGATATTGAAAACATCGGAGCTTAA
Protein sequence

>MsG0380014907.01.T01

MQHFFHHSRILQNPYSFSISTMSSSLTLPSFSPIFFPNRTHTLKTHNFPKSRVFATISTGSQSSIHEASVADYKVSNAFLFPGQGAQAVGMGKEAQSVPSAAVLYKKANEILGFDLLDVCINGPKEKLNSTVISQPALYVTSLAAVELLRAREGGEQIIDSVDVSCGLSLGEYTALAFAGAFSFEDGLKLVKLRGEAMQDAADATKGAMVSVVGLDSEKVQQLCDAANQEVPEAEKVQIANYLCPGNYAVSGGIKGIEVVEAKAKSFKARMAVRLAVAGAFHTSFMEPAVSRLEAALASTDIRTPRIPVISNVNALPHTDPDTIKKILAQQVTYPVQWETTVKTLLSKGLKKSYELGPGKVIAGIVKRMDKGADIENIGA*