Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018278.01.T01 | XP_013454608.1 | 89.354 | 263 | 5 | 1 | 1 | 263 | 1 | 240 | 5.02E-171 | 481 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018278.01.T01 | Q93VG8 | 42.408 | 191 | 87 | 1 | 27 | 217 | 26 | 193 | 3.34E-56 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018278.01.T01 | A0A072UFW2 | 89.354 | 263 | 5 | 1 | 1 | 263 | 1 | 240 | 2.40e-171 | 481 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048152.01 | MsG0480018278.01 | 0.841720 | 4.005322e-58 | 5.936561e-55 |
| MsG0080048784.01 | MsG0480018278.01 | 0.823647 | 1.237311e-53 | 1.071765e-50 |
| MsG0080048856.01 | MsG0480018278.01 | 0.810686 | 1.018899e-50 | 6.182645e-48 |
| MsG0180000038.01 | MsG0480018278.01 | 0.816883 | 4.394142e-52 | 3.151815e-49 |
| MsG0180000139.01 | MsG0480018278.01 | 0.841502 | 4.570409e-58 | 6.729191e-55 |
| MsG0180000155.01 | MsG0480018278.01 | 0.816083 | 6.639473e-52 | 4.659377e-49 |
| MsG0180000289.01 | MsG0480018278.01 | 0.808061 | 3.725654e-50 | 2.109206e-47 |
| MsG0180000331.01 | MsG0480018278.01 | 0.841665 | 4.141142e-58 | 6.127563e-55 |
| MsG0180000335.01 | MsG0480018278.01 | 0.808353 | 3.228702e-50 | 1.842085e-47 |
| MsG0180000355.01 | MsG0480018278.01 | 0.836765 | 7.726561e-57 | 9.833551e-54 |
| MsG0180000404.01 | MsG0480018278.01 | 0.821668 | 3.573111e-53 | 2.925769e-50 |
| MsG0180000442.01 | MsG0480018278.01 | 0.805446 | 1.329502e-49 | 7.035221e-47 |
| MsG0180000835.01 | MsG0480018278.01 | 0.841803 | 3.806764e-58 | 5.657127e-55 |
| MsG0180000836.01 | MsG0480018278.01 | 0.818837 | 1.591537e-52 | 1.204572e-49 |
| MsG0180000914.01 | MsG0480018278.01 | 0.805042 | 1.615788e-49 | 8.461795e-47 |
| MsG0180001153.01 | MsG0480018278.01 | 0.800611 | 1.329074e-48 | 6.215685e-46 |
| MsG0180001828.01 | MsG0480018278.01 | 0.855218 | 7.313601e-62 | 1.675983e-58 |
| MsG0180001892.01 | MsG0480018278.01 | 0.815188 | 1.050786e-51 | 7.194711e-49 |
| MsG0180002547.01 | MsG0480018278.01 | 0.812957 | 3.264652e-51 | 2.104155e-48 |
| MsG0180002901.01 | MsG0480018278.01 | 0.815804 | 7.662973e-52 | 5.336613e-49 |
| MsG0180002992.01 | MsG0480018278.01 | 0.804085 | 2.558624e-49 | 1.307331e-46 |
| MsG0180003094.01 | MsG0480018278.01 | 0.840597 | 7.900068e-58 | 1.130830e-54 |
| MsG0180003353.01 | MsG0480018278.01 | 0.801567 | 8.472956e-49 | 4.059493e-46 |
| MsG0180003493.01 | MsG0480018278.01 | 0.878769 | 2.147586e-69 | 1.135091e-65 |
| MsG0180003548.01 | MsG0480018278.01 | 0.814812 | 1.272927e-51 | 8.627920e-49 |
| MsG0180003651.01 | MsG0480018278.01 | 0.849082 | 4.062473e-60 | 7.613644e-57 |
| MsG0180003786.01 | MsG0480018278.01 | 0.806302 | 8.787407e-50 | 4.753048e-47 |
| MsG0180003793.01 | MsG0480018278.01 | 0.818538 | 1.860255e-52 | 1.396347e-49 |
| MsG0180003885.01 | MsG0480018278.01 | 0.823991 | 1.027752e-53 | 8.988295e-51 |
| MsG0180003922.01 | MsG0480018278.01 | 0.843649 | 1.230429e-58 | 1.938147e-55 |
| MsG0180003932.01 | MsG0480018278.01 | 0.851495 | 8.548645e-61 | 1.733519e-57 |
| MsG0180003951.01 | MsG0480018278.01 | 0.819908 | 9.070029e-53 | 7.072137e-50 |
| MsG0180004009.01 | MsG0480018278.01 | 0.801314 | 9.547227e-49 | 4.545186e-46 |
| MsG0180004046.01 | MsG0480018278.01 | 0.826745 | 2.291731e-54 | 2.168083e-51 |
| MsG0180004062.01 | MsG0480018278.01 | 0.859759 | 3.312357e-63 | 8.845281e-60 |
| MsG0180004249.01 | MsG0480018278.01 | 0.811439 | 6.998627e-51 | 4.332455e-48 |
| MsG0180004398.01 | MsG0480018278.01 | 0.821025 | 5.027877e-53 | 4.044152e-50 |
| MsG0180004466.01 | MsG0480018278.01 | 0.801585 | 8.398707e-49 | 4.025738e-46 |
| MsG0180004481.01 | MsG0480018278.01 | 0.807515 | 4.868586e-50 | 2.717233e-47 |
| MsG0180004482.01 | MsG0480018278.01 | 0.816324 | 5.865468e-52 | 4.143458e-49 |
| MsG0180004493.01 | MsG0480018278.01 | 0.836563 | 8.696703e-57 | 1.100018e-53 |
| MsG0180004500.01 | MsG0480018278.01 | 0.819870 | 9.255691e-53 | 7.208866e-50 |
| MsG0180004605.01 | MsG0480018278.01 | -0.829750 | 4.323355e-55 | 4.465801e-52 |
| MsG0180004743.01 | MsG0480018278.01 | 0.801459 | 8.915067e-49 | 4.259732e-46 |
| MsG0180004769.01 | MsG0480018278.01 | 0.808547 | 2.935514e-50 | 1.683252e-47 |
| MsG0180004854.01 | MsG0480018278.01 | 0.825705 | 4.053054e-54 | 3.722578e-51 |
| MsG0180004861.01 | MsG0480018278.01 | 0.809899 | 1.505955e-50 | 8.950479e-48 |
| MsG0180005153.01 | MsG0480018278.01 | 0.834094 | 3.655996e-56 | 4.294033e-53 |
| MsG0180005169.01 | MsG0480018278.01 | 0.822554 | 2.226156e-53 | 1.869644e-50 |
| MsG0180005334.01 | MsG0480018278.01 | 0.825449 | 4.659950e-54 | 4.248426e-51 |
| MsG0180005424.01 | MsG0480018278.01 | 0.806555 | 7.771700e-50 | 4.230953e-47 |
| MsG0180005524.01 | MsG0480018278.01 | 0.821733 | 3.451492e-53 | 2.831326e-50 |
| MsG0180005575.01 | MsG0480018278.01 | 0.845192 | 4.733231e-59 | 7.825570e-56 |
| MsG0180005746.01 | MsG0480018278.01 | 0.827192 | 1.791685e-54 | 1.717420e-51 |
| MsG0180005962.01 | MsG0480018278.01 | -0.859876 | 3.053815e-63 | 8.188677e-60 |
| MsG0180006017.01 | MsG0480018278.01 | 0.863769 | 1.964544e-64 | 6.026337e-61 |
| MsG0180006096.01 | MsG0480018278.01 | 0.812889 | 3.377824e-51 | 2.173354e-48 |
| MsG0180006224.01 | MsG0480018278.01 | 0.809642 | 1.710306e-50 | 1.009721e-47 |
| MsG0280006376.01 | MsG0480018278.01 | 0.802145 | 6.446820e-49 | 3.134454e-46 |
| MsG0280010776.01 | MsG0480018278.01 | 0.839396 | 1.624710e-57 | 2.240952e-54 |
| MsG0280010778.01 | MsG0480018278.01 | 0.819189 | 1.323142e-52 | 1.011166e-49 |
| MsG0280011027.01 | MsG0480018278.01 | 0.810255 | 1.262648e-50 | 7.574381e-48 |
| MsG0280011304.01 | MsG0480018278.01 | 0.819056 | 1.419087e-52 | 1.080542e-49 |
| MsG0280011339.01 | MsG0480018278.01 | 0.833832 | 4.250940e-56 | 4.954077e-53 |
| MsG0280011341.01 | MsG0480018278.01 | 0.810627 | 1.048975e-50 | 6.355219e-48 |
| MsG0280011388.01 | MsG0480018278.01 | 0.808839 | 2.543086e-50 | 1.469334e-47 |
| MsG0280011416.01 | MsG0480018278.01 | 0.804072 | 2.574447e-49 | 1.315022e-46 |
| MsG0380011516.01 | MsG0480018278.01 | 0.838257 | 3.201455e-57 | 4.264012e-54 |
| MsG0380011581.01 | MsG0480018278.01 | 0.824185 | 9.254433e-54 | 8.138415e-51 |
| MsG0380011614.01 | MsG0480018278.01 | 0.802005 | 6.888057e-49 | 3.337042e-46 |
| MsG0380012067.01 | MsG0480018278.01 | 0.818033 | 2.420344e-52 | 1.791557e-49 |
| MsG0380012122.01 | MsG0480018278.01 | 0.833885 | 4.123229e-56 | 4.812881e-53 |
| MsG0380012570.01 | MsG0480018278.01 | 0.813214 | 2.867301e-51 | 1.860946e-48 |
| MsG0380013085.01 | MsG0480018278.01 | 0.841707 | 4.034802e-58 | 5.977961e-55 |
| MsG0380013183.01 | MsG0480018278.01 | 0.825078 | 5.703819e-54 | 5.146190e-51 |
| MsG0380013475.01 | MsG0480018278.01 | 0.804679 | 1.924134e-49 | 9.982861e-47 |
| MsG0380013641.01 | MsG0480018278.01 | 0.800381 | 1.480120e-48 | 6.882124e-46 |
| MsG0380014175.01 | MsG0480018278.01 | 0.835942 | 1.250772e-56 | 1.552745e-53 |
| MsG0380014778.01 | MsG0480018278.01 | 0.837620 | 4.668127e-57 | 6.098351e-54 |
| MsG0380014875.01 | MsG0480018278.01 | 0.860012 | 2.778531e-63 | 7.485236e-60 |
| MsG0380014907.01 | MsG0480018278.01 | 0.859910 | 2.982565e-63 | 8.006687e-60 |
| MsG0380014948.01 | MsG0480018278.01 | 0.810208 | 1.292208e-50 | 7.741914e-48 |
| MsG0380015332.01 | MsG0480018278.01 | 0.832983 | 6.923070e-56 | 7.865339e-53 |
| MsG0380015435.01 | MsG0480018278.01 | 0.845689 | 3.471519e-59 | 5.832804e-56 |
| MsG0380015870.01 | MsG0480018278.01 | 0.816555 | 5.205408e-52 | 3.700239e-49 |
| MsG0380015875.01 | MsG0480018278.01 | 0.819823 | 9.484724e-53 | 7.377868e-50 |
| MsG0380015944.01 | MsG0480018278.01 | 0.803271 | 3.775285e-49 | 1.889014e-46 |
| MsG0380016005.01 | MsG0480018278.01 | 0.838762 | 2.371558e-57 | 3.208081e-54 |
| MsG0380016126.01 | MsG0480018278.01 | 0.868265 | 7.422210e-66 | 2.668265e-62 |
| MsG0380016247.01 | MsG0480018278.01 | 0.858903 | 5.982174e-63 | 1.551101e-59 |
| MsG0380016249.01 | MsG0480018278.01 | 0.817964 | 2.509542e-52 | 1.854035e-49 |
| MsG0380016290.01 | MsG0480018278.01 | 0.831195 | 1.915027e-55 | 2.063168e-52 |
| MsG0380016505.01 | MsG0480018278.01 | 0.883574 | 3.998173e-71 | 2.549065e-67 |
| MsG0380016555.01 | MsG0480018278.01 | 0.800857 | 1.183790e-48 | 5.571160e-46 |
| MsG0380016671.01 | MsG0480018278.01 | 0.869015 | 4.249074e-66 | 1.569844e-62 |
| MsG0380016970.01 | MsG0480018278.01 | 0.805084 | 1.583695e-49 | 8.302645e-47 |
| MsG0380017258.01 | MsG0480018278.01 | 0.813124 | 2.999555e-51 | 1.942024e-48 |
| MsG0380017433.01 | MsG0480018278.01 | 0.814132 | 1.800521e-51 | 1.198128e-48 |
| MsG0380017498.01 | MsG0480018278.01 | 0.810793 | 9.657691e-51 | 5.877134e-48 |
| MsG0380017947.01 | MsG0480018278.01 | 0.835423 | 1.692765e-56 | 2.069082e-53 |
| MsG0380018033.01 | MsG0480018278.01 | 0.808533 | 2.955844e-50 | 1.694281e-47 |
| MsG0480018124.01 | MsG0480018278.01 | 0.816842 | 4.489357e-52 | 3.216506e-49 |
| MsG0480018183.01 | MsG0480018278.01 | 0.801701 | 7.951294e-49 | 3.822473e-46 |
| MsG0480018278.01 | MsG0480018894.01 | 0.835817 | 1.345276e-56 | 1.663818e-53 |
| MsG0480018278.01 | MsG0480018911.01 | 0.804530 | 2.066395e-49 | 1.067933e-46 |
| MsG0480018278.01 | MsG0480019539.01 | 0.809096 | 2.240584e-50 | 1.303567e-47 |
| MsG0480018278.01 | MsG0480020675.01 | 0.801668 | 8.079184e-49 | 3.880697e-46 |
| MsG0480018278.01 | MsG0480020739.01 | 0.812150 | 4.900477e-51 | 3.091774e-48 |
| MsG0480018278.01 | MsG0480020780.01 | 0.818627 | 1.775709e-52 | 1.336085e-49 |
| MsG0480018278.01 | MsG0480021037.01 | 0.873955 | 9.840218e-68 | 4.350341e-64 |
| MsG0480018278.01 | MsG0480021056.01 | 0.843799 | 1.121826e-58 | 1.775132e-55 |
| MsG0480018278.01 | MsG0480021077.01 | -0.825999 | 3.449902e-54 | 3.195331e-51 |
| MsG0480018278.01 | MsG0480021195.01 | 0.819444 | 1.157995e-52 | 8.912666e-50 |
| MsG0480018278.01 | MsG0480021706.01 | 0.805650 | 1.204699e-49 | 6.408419e-47 |
| MsG0480018278.01 | MsG0480021768.01 | 0.828436 | 8.997890e-55 | 8.943406e-52 |
| MsG0480018278.01 | MsG0480021870.01 | 0.805168 | 1.520581e-49 | 7.989067e-47 |
| MsG0480018278.01 | MsG0480022514.01 | 0.823135 | 1.630428e-53 | 1.391974e-50 |
| MsG0480018278.01 | MsG0480022586.01 | 0.852225 | 5.309637e-61 | 1.101964e-57 |
| MsG0480018278.01 | MsG0480022672.01 | 0.820406 | 6.974814e-53 | 5.514205e-50 |
| MsG0480018278.01 | MsG0480022780.01 | 0.835442 | 1.674251e-56 | 2.047579e-53 |
| MsG0480018278.01 | MsG0480022825.01 | 0.801583 | 8.407705e-49 | 4.029835e-46 |
| MsG0480018278.01 | MsG0480022855.01 | 0.803325 | 3.678940e-49 | 1.843316e-46 |
| MsG0480018278.01 | MsG0480022877.01 | 0.829053 | 6.383835e-55 | 6.459435e-52 |
| MsG0480018278.01 | MsG0480023172.01 | 0.821519 | 3.868152e-53 | 3.153966e-50 |
| MsG0480018278.01 | MsG0480023221.01 | 0.873309 | 1.625198e-67 | 7.019897e-64 |
| MsG0480018278.01 | MsG0480023384.01 | 0.806738 | 7.111489e-50 | 3.889653e-47 |
| MsG0480018278.01 | MsG0480023387.01 | 0.850739 | 1.397144e-60 | 2.763868e-57 |
| MsG0480018278.01 | MsG0480023400.01 | -0.805181 | 1.511376e-49 | 7.943279e-47 |
| MsG0480018278.01 | MsG0480023463.01 | 0.839634 | 1.409120e-57 | 1.957658e-54 |
| MsG0480018278.01 | MsG0480023601.01 | 0.802125 | 6.506665e-49 | 3.161925e-46 |
| MsG0480018278.01 | MsG0480023639.01 | 0.845494 | 3.921713e-59 | 6.547126e-56 |
| MsG0480018278.01 | MsG0480023657.01 | 0.819669 | 1.028447e-52 | 7.965432e-50 |
| MsG0480018278.01 | MsG0580024619.01 | 0.814890 | 1.223390e-51 | 8.309250e-49 |
| MsG0480018278.01 | MsG0580025131.01 | 0.843597 | 1.270901e-58 | 1.998518e-55 |
| MsG0480018278.01 | MsG0580025268.01 | 0.824645 | 7.216449e-54 | 6.430934e-51 |
| MsG0480018278.01 | MsG0580025332.01 | 0.823196 | 1.577286e-53 | 1.348865e-50 |
| MsG0480018278.01 | MsG0580025814.01 | 0.842273 | 2.858964e-58 | 4.312466e-55 |
| MsG0480018278.01 | MsG0580025816.01 | 0.823426 | 1.394098e-53 | 1.199873e-50 |
| MsG0480018278.01 | MsG0580026059.01 | 0.805604 | 1.232142e-49 | 6.546355e-47 |
| MsG0480018278.01 | MsG0580026175.01 | 0.807002 | 6.253429e-50 | 3.443760e-47 |
| MsG0480018278.01 | MsG0580026226.01 | 0.819118 | 1.373550e-52 | 1.047654e-49 |
| MsG0480018278.01 | MsG0580027925.01 | 0.800233 | 1.586463e-48 | 7.348612e-46 |
| MsG0480018278.01 | MsG0580027999.01 | 0.826397 | 2.774553e-54 | 2.599016e-51 |
| MsG0480018278.01 | MsG0580028148.01 | 0.810394 | 1.177916e-50 | 7.091871e-48 |
| MsG0480018278.01 | MsG0580028630.01 | 0.850628 | 1.501617e-60 | 2.959731e-57 |
| MsG0480018278.01 | MsG0580028897.01 | 0.826091 | 3.281073e-54 | 3.046665e-51 |
| MsG0480018278.01 | MsG0580029127.01 | 0.836510 | 8.969142e-57 | 1.132708e-53 |
| MsG0480018278.01 | MsG0580029236.01 | 0.800132 | 1.663209e-48 | 7.684554e-46 |
| MsG0480018278.01 | MsG0580029729.01 | 0.828822 | 7.260595e-55 | 7.297440e-52 |
| MsG0480018278.01 | MsG0580029736.01 | 0.814577 | 1.435225e-51 | 9.666467e-49 |
| MsG0480018278.01 | MsG0580029919.01 | 0.802765 | 4.804298e-49 | 2.373147e-46 |
| MsG0480018278.01 | MsG0580030010.01 | 0.839050 | 1.998282e-57 | 2.726780e-54 |
| MsG0480018278.01 | MsG0680030350.01 | 0.841312 | 5.129014e-58 | 7.506064e-55 |
| MsG0480018278.01 | MsG0680030865.01 | 0.816181 | 6.311123e-52 | 4.440754e-49 |
| MsG0480018278.01 | MsG0680030881.01 | 0.802549 | 5.321508e-49 | 2.614102e-46 |
| MsG0480018278.01 | MsG0680030968.01 | 0.801510 | 8.702722e-49 | 4.163717e-46 |
| MsG0480018278.01 | MsG0680031431.01 | 0.818027 | 2.428519e-52 | 1.797305e-49 |
| MsG0480018278.01 | MsG0680031628.01 | 0.839163 | 1.867407e-57 | 2.557036e-54 |
| MsG0480018278.01 | MsG0680031762.01 | 0.831243 | 1.864617e-55 | 2.011540e-52 |
| MsG0480018278.01 | MsG0680034602.01 | 0.811987 | 5.318713e-51 | 3.340602e-48 |
| MsG0480018278.01 | MsG0680035498.01 | 0.833333 | 5.663302e-56 | 6.502187e-53 |
| MsG0480018278.01 | MsG0680035577.01 | 0.815482 | 9.037436e-52 | 6.238891e-49 |
| MsG0480018278.01 | MsG0680035876.01 | 0.815575 | 8.615783e-52 | 5.962654e-49 |
| MsG0480018278.01 | MsG0680035877.01 | 0.801359 | 9.347072e-49 | 4.454989e-46 |
| MsG0480018278.01 | MsG0680035888.01 | 0.872774 | 2.456451e-67 | 1.040637e-63 |
| MsG0480018278.01 | MsG0780036186.01 | 0.813191 | 2.899975e-51 | 1.881032e-48 |
| MsG0480018278.01 | MsG0780036297.01 | 0.804556 | 2.041411e-49 | 1.055738e-46 |
| MsG0480018278.01 | MsG0780036659.01 | 0.840391 | 8.942725e-58 | 1.272053e-54 |
| MsG0480018278.01 | MsG0780036757.01 | 0.854888 | 9.114444e-62 | 2.066016e-58 |
| MsG0480018278.01 | MsG0780037054.01 | 0.807732 | 4.377681e-50 | 2.457066e-47 |
| MsG0480018278.01 | MsG0780037093.01 | 0.897809 | 9.808529e-77 | 1.126884e-72 |
| MsG0480018278.01 | MsG0780037240.01 | 0.806073 | 9.819696e-50 | 5.280463e-47 |
| MsG0480018278.01 | MsG0780038232.01 | 0.805881 | 1.077599e-49 | 5.766426e-47 |
| MsG0480018278.01 | MsG0780038400.01 | 0.829393 | 5.279194e-55 | 5.396336e-52 |
| MsG0480018278.01 | MsG0780038603.01 | 0.826100 | 3.264774e-54 | 3.032429e-51 |
| MsG0480018278.01 | MsG0780038892.01 | 0.818039 | 2.412719e-52 | 1.786199e-49 |
| MsG0480018278.01 | MsG0780038910.01 | -0.834779 | 2.460020e-56 | 2.948950e-53 |
| MsG0480018278.01 | MsG0780039155.01 | 0.815652 | 8.282868e-52 | 5.744637e-49 |
| MsG0480018278.01 | MsG0780039170.01 | 0.808148 | 3.570211e-50 | 2.025946e-47 |
| MsG0480018278.01 | MsG0780039369.01 | 0.822745 | 2.010120e-53 | 1.697325e-50 |
| MsG0480018278.01 | MsG0780039443.01 | 0.823146 | 1.620452e-53 | 1.383903e-50 |
| MsG0480018278.01 | MsG0780040104.01 | 0.804208 | 2.411990e-49 | 1.236261e-46 |
| MsG0480018278.01 | MsG0780040529.01 | 0.836756 | 7.766674e-57 | 9.882142e-54 |
| MsG0480018278.01 | MsG0780040569.01 | 0.803417 | 3.521057e-49 | 1.768470e-46 |
| MsG0480018278.01 | MsG0780040926.01 | 0.833102 | 6.467048e-56 | 7.373646e-53 |
| MsG0480018278.01 | MsG0780041016.01 | 0.860358 | 2.184399e-63 | 5.954754e-60 |
| MsG0480018278.01 | MsG0780041223.01 | 0.823159 | 1.609595e-53 | 1.375038e-50 |
| MsG0480018278.01 | MsG0780041268.01 | 0.844726 | 6.325297e-59 | 1.030492e-55 |
| MsG0480018278.01 | MsG0780041391.01 | 0.825348 | 4.923063e-54 | 4.475729e-51 |
| MsG0480018278.01 | MsG0780041440.01 | 0.862726 | 4.130476e-64 | 1.221995e-60 |
| MsG0480018278.01 | MsG0780041584.01 | 0.809976 | 1.449472e-50 | 8.632374e-48 |
| MsG0480018278.01 | MsG0880042033.01 | 0.821204 | 4.572696e-53 | 3.696200e-50 |
| MsG0480018278.01 | MsG0880042091.01 | 0.803689 | 3.092423e-49 | 1.564067e-46 |
| MsG0480018278.01 | MsG0880042128.01 | 0.854390 | 1.270901e-61 | 2.833685e-58 |
| MsG0480018278.01 | MsG0880042129.01 | 0.834123 | 3.594790e-56 | 4.225694e-53 |
| MsG0480018278.01 | MsG0880042324.01 | 0.800985 | 1.114823e-48 | 5.263825e-46 |
| MsG0480018278.01 | MsG0880042348.01 | 0.807754 | 4.330895e-50 | 2.432179e-47 |
| MsG0480018278.01 | MsG0880042544.01 | 0.842166 | 3.052512e-58 | 4.588430e-55 |
| MsG0480018278.01 | MsG0880042760.01 | 0.811445 | 6.976617e-51 | 4.319566e-48 |
| MsG0480018278.01 | MsG0880042795.01 | 0.843559 | 1.300734e-58 | 2.042931e-55 |
| MsG0480018278.01 | MsG0880042991.01 | 0.849325 | 3.476640e-60 | 6.567546e-57 |
| MsG0480018278.01 | MsG0880043944.01 | 0.803848 | 2.866072e-49 | 1.455585e-46 |
| MsG0480018278.01 | MsG0880043985.01 | 0.804339 | 2.264756e-49 | 1.164750e-46 |
| MsG0480018278.01 | MsG0880044005.01 | 0.820801 | 5.662025e-53 | 4.525383e-50 |
| MsG0480018278.01 | MsG0880044067.01 | 0.841329 | 5.077563e-58 | 7.434669e-55 |
| MsG0480018278.01 | MsG0880044131.01 | 0.806932 | 6.468364e-50 | 3.555742e-47 |
| MsG0480018278.01 | MsG0880044142.01 | 0.828833 | 7.217763e-55 | 7.256397e-52 |
| MsG0480018278.01 | MsG0880044555.01 | 0.805866 | 1.085326e-49 | 5.805685e-47 |
| MsG0480018278.01 | MsG0880044565.01 | 0.811624 | 6.379299e-51 | 3.968099e-48 |
| MsG0480018278.01 | MsG0880044704.01 | 0.800315 | 1.526614e-48 | 7.086482e-46 |
| MsG0480018278.01 | MsG0880044782.01 | 0.817918 | 2.570333e-52 | 1.896631e-49 |
| MsG0480018278.01 | MsG0880044957.01 | 0.804665 | 1.936683e-49 | 1.004430e-46 |
| MsG0480018278.01 | MsG0880045294.01 | 0.882365 | 1.107081e-70 | 6.724482e-67 |
| MsG0480018278.01 | MsG0880045483.01 | 0.843069 | 1.757332e-58 | 2.717479e-55 |
| MsG0480018278.01 | MsG0880045656.01 | 0.800396 | 1.469664e-48 | 6.835990e-46 |
| MsG0480018278.01 | MsG0880045684.01 | 0.815623 | 8.406873e-52 | 5.826189e-49 |
| MsG0480018278.01 | MsG0880046517.01 | 0.800762 | 1.238059e-48 | 5.812137e-46 |
| MsG0480018278.01 | MsG0880047473.01 | 0.809770 | 1.605502e-50 | 9.510381e-48 |
| MsG0480018278.01 | MsG0880047703.01 | 0.800000 | 1.769352e-48 | 8.147399e-46 |
| MsG0480018278.01 | MsG0880047743.01 | 0.804389 | 2.211039e-49 | 1.138580e-46 |
| MsG0280006545.01 | MsG0480018278.01 | 0.825841 | 3.760894e-54 | 3.467883e-51 |
| MsG0280006712.01 | MsG0480018278.01 | 0.800874 | 1.174423e-48 | 5.529435e-46 |
| MsG0280006993.01 | MsG0480018278.01 | 0.848881 | 4.619891e-60 | 8.601602e-57 |
| MsG0280007067.01 | MsG0480018278.01 | 0.802791 | 4.744822e-49 | 2.345334e-46 |
| MsG0280007224.01 | MsG0480018278.01 | -0.816030 | 6.821770e-52 | 4.780285e-49 |
| MsG0280007226.01 | MsG0480018278.01 | 0.842248 | 2.903890e-58 | 4.376503e-55 |
| MsG0280007307.01 | MsG0480018278.01 | 0.819366 | 1.206246e-52 | 9.262994e-50 |
| MsG0280007452.01 | MsG0480018278.01 | 0.821921 | 3.121593e-53 | 2.574534e-50 |
| MsG0280007501.01 | MsG0480018278.01 | 0.835319 | 1.798402e-56 | 2.191602e-53 |
| MsG0280007503.01 | MsG0480018278.01 | 0.840499 | 8.381065e-58 | 1.196134e-54 |
| MsG0280007506.01 | MsG0480018278.01 | 0.804306 | 2.300949e-49 | 1.182365e-46 |
| MsG0280007527.01 | MsG0480018278.01 | 0.837582 | 4.774069e-57 | 6.229174e-54 |
| MsG0280007847.01 | MsG0480018278.01 | 0.805340 | 1.399579e-49 | 7.385792e-47 |
| MsG0280007903.01 | MsG0480018278.01 | 0.826155 | 3.167175e-54 | 2.946446e-51 |
| MsG0280007955.01 | MsG0480018278.01 | 0.804146 | 2.484539e-49 | 1.271473e-46 |
| MsG0280008118.01 | MsG0480018278.01 | 0.816690 | 4.856222e-52 | 3.464676e-49 |
| MsG0280008429.01 | MsG0480018278.01 | 0.819891 | 9.151871e-53 | 7.132557e-50 |
| MsG0280008614.01 | MsG0480018278.01 | 0.801211 | 1.001946e-48 | 4.757738e-46 |
| MsG0280008909.01 | MsG0480018278.01 | 0.810313 | 1.226827e-50 | 7.370536e-48 |
| MsG0280009794.01 | MsG0480018278.01 | 0.826785 | 2.242551e-54 | 2.123977e-51 |
| MsG0280009983.01 | MsG0480018278.01 | 0.800024 | 1.749442e-48 | 8.060673e-46 |
| MsG0280010082.01 | MsG0480018278.01 | 0.834188 | 3.461970e-56 | 4.077283e-53 |
| MsG0280010148.01 | MsG0480018278.01 | 0.807579 | 4.718102e-50 | 2.637413e-47 |
| MsG0280010184.01 | MsG0480018278.01 | 0.801859 | 7.380519e-49 | 3.562552e-46 |
| MsG0280010411.01 | MsG0480018278.01 | 0.802099 | 6.586774e-49 | 3.198798e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018278.01.T01 | MTR_4g008530 | 89.354 | 263 | 5 | 1 | 1 | 263 | 1 | 240 | 6.08e-175 | 481 |
| MsG0480018278.01.T01 | MTR_1g013110 | 62.500 | 168 | 40 | 1 | 25 | 192 | 15 | 159 | 1.11e-73 | 224 |
| MsG0480018278.01.T01 | MTR_3g106240 | 52.558 | 215 | 71 | 3 | 25 | 237 | 15 | 200 | 6.48e-73 | 222 |
| MsG0480018278.01.T01 | MTR_1g034490 | 46.479 | 213 | 87 | 3 | 4 | 215 | 18 | 204 | 5.13e-67 | 208 |
| MsG0480018278.01.T01 | MTR_1g022015 | 48.077 | 208 | 81 | 3 | 10 | 216 | 25 | 206 | 3.05e-64 | 201 |
| MsG0480018278.01.T01 | MTR_5g013040 | 50.000 | 176 | 65 | 1 | 19 | 194 | 15 | 167 | 1.05e-61 | 194 |
| MsG0480018278.01.T01 | MTR_5g013040 | 49.432 | 176 | 63 | 2 | 19 | 194 | 15 | 164 | 4.90e-58 | 184 |
| MsG0480018278.01.T01 | MTR_4g100500 | 48.795 | 166 | 62 | 1 | 29 | 194 | 24 | 166 | 7.60e-58 | 184 |
| MsG0480018278.01.T01 | MTR_4g113720 | 40.314 | 191 | 88 | 2 | 29 | 219 | 31 | 195 | 9.51e-51 | 166 |
| MsG0480018278.01.T01 | MTR_4g113720 | 40.314 | 191 | 88 | 2 | 29 | 219 | 31 | 195 | 1.09e-50 | 166 |
| MsG0480018278.01.T01 | MTR_2g054770 | 39.512 | 205 | 87 | 3 | 34 | 224 | 33 | 214 | 6.42e-50 | 164 |
| MsG0480018278.01.T01 | MTR_5g013040 | 43.529 | 170 | 66 | 3 | 31 | 199 | 20 | 160 | 2.64e-46 | 154 |
| MsG0480018278.01.T01 | MTR_1g100100 | 38.298 | 141 | 68 | 5 | 29 | 153 | 4 | 141 | 6.47e-24 | 96.7 |
| MsG0480018278.01.T01 | MTR_6g048290 | 40.566 | 106 | 61 | 2 | 49 | 153 | 38 | 142 | 2.68e-22 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480018278.01.T01 | AT1G80690 | 61.650 | 206 | 55 | 5 | 12 | 216 | 1 | 183 | 1.43e-87 | 260 |
| MsG0480018278.01.T01 | AT1G80690 | 60.680 | 206 | 53 | 5 | 12 | 216 | 1 | 179 | 9.14e-85 | 253 |
| MsG0480018278.01.T01 | AT5G25170 | 58.919 | 185 | 52 | 2 | 25 | 209 | 16 | 176 | 5.68e-75 | 228 |
| MsG0480018278.01.T01 | AT2G25190 | 59.783 | 184 | 48 | 3 | 12 | 193 | 1 | 160 | 1.94e-73 | 224 |
| MsG0480018278.01.T01 | AT4G31980 | 56.831 | 183 | 55 | 2 | 12 | 193 | 1 | 160 | 1.34e-66 | 219 |
| MsG0480018278.01.T01 | AT1G47740 | 47.393 | 211 | 84 | 2 | 4 | 214 | 46 | 229 | 5.24e-65 | 204 |
| MsG0480018278.01.T01 | AT1G47740 | 47.393 | 211 | 84 | 2 | 4 | 214 | 46 | 229 | 5.24e-65 | 204 |
| MsG0480018278.01.T01 | AT1G47740 | 47.393 | 211 | 84 | 2 | 4 | 214 | 46 | 229 | 5.24e-65 | 204 |
| MsG0480018278.01.T01 | AT5G47310 | 47.024 | 168 | 66 | 1 | 27 | 194 | 28 | 172 | 2.77e-58 | 186 |
| MsG0480018278.01.T01 | AT4G17486 | 42.408 | 191 | 87 | 1 | 27 | 217 | 26 | 193 | 3.40e-57 | 182 |
| MsG0480018278.01.T01 | AT4G17486 | 55.200 | 125 | 56 | 0 | 28 | 152 | 27 | 151 | 8.93e-54 | 173 |
| MsG0480018278.01.T01 | AT5G25170 | 57.143 | 140 | 37 | 1 | 55 | 194 | 2 | 118 | 2.11e-52 | 169 |
| MsG0480018278.01.T01 | AT4G25660 | 40.566 | 106 | 61 | 2 | 49 | 153 | 38 | 142 | 3.97e-21 | 89.7 |
| MsG0480018278.01.T01 | AT4G25680 | 40.566 | 106 | 61 | 2 | 49 | 153 | 38 | 142 | 4.52e-21 | 89.7 |
| MsG0480018278.01.T01 | AT3G07090 | 32.308 | 130 | 70 | 5 | 29 | 149 | 8 | 128 | 4.85e-11 | 62.0 |
| MsG0480018278.01.T01 | AT3G07090 | 32.308 | 130 | 70 | 5 | 29 | 149 | 8 | 128 | 4.85e-11 | 62.0 |
Find 45 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCTTGGTGTTTATCATTC+TGG | 0.204257 | 4:+2676110 | MsG0480018278.01.T01:CDS |
| TCACGAAACGGTATCGTTTC+GGG | 0.210914 | 4:+2676023 | MsG0480018278.01.T01:CDS |
| CTGAATCCTTCACATTTCTT+TGG | 0.225135 | 4:-2676960 | None:intergenic |
| AATTCAACGGTTATGCTTAC+TGG | 0.242093 | 4:+2676084 | MsG0480018278.01.T01:CDS |
| CTTGAAACATTAACCTTGTT+TGG | 0.254573 | 4:-2679050 | None:intergenic |
| AACATTGCTTATATTATTGC+AGG | 0.313691 | 4:+2678903 | MsG0480018278.01.T01:CDS |
| TTCACGAAACGGTATCGTTT+CGG | 0.332452 | 4:+2676022 | MsG0480018278.01.T01:CDS |
| AACGGTTATGCTTACTGGTT+TGG | 0.341414 | 4:+2676089 | MsG0480018278.01.T01:CDS |
| AAGCAATGTTTATCTCAATA+AGG | 0.377726 | 4:-2678890 | None:intergenic |
| TCACCAGCTTCTTCTAGCTC+TGG | 0.378536 | 4:+2679095 | MsG0480018278.01.T01:CDS |
| GTTAATCGTCTTGCTAGAAT+TGG | 0.379939 | 4:+2677161 | MsG0480018278.01.T01:CDS |
| TATGCTTACTGGTTTGGTCT+TGG | 0.389422 | 4:+2676095 | MsG0480018278.01.T01:CDS |
| CTGGAAATTCTATACCTAGT+TGG | 0.392597 | 4:+2677138 | MsG0480018278.01.T01:CDS |
| TGGAAATTCTATACCTAGTT+GGG | 0.400569 | 4:+2677139 | MsG0480018278.01.T01:CDS |
| TTTAGAAAGACAGTAATGAT+TGG | 0.412782 | 4:+2676984 | MsG0480018278.01.T01:CDS |
| CATGGTGTTGAATATGCATT+TGG | 0.429052 | 4:+2676897 | MsG0480018278.01.T01:CDS |
| GTTTATCATTCTGGTGTTCA+AGG | 0.430967 | 4:+2676119 | MsG0480018278.01.T01:CDS |
| GCACATGAGTATGCATCAAC+AGG | 0.466234 | 4:+2676921 | MsG0480018278.01.T01:CDS |
| TATCGTTTCGGGATCGGTGC+CGG | 0.475573 | 4:+2676034 | MsG0480018278.01.T01:CDS |
| CTTCTAGCTCTGGATTAAGA+AGG | 0.486970 | 4:+2679105 | MsG0480018278.01.T01:CDS |
| TTCTAGCTCTGGATTAAGAA+GGG | 0.509805 | 4:+2679106 | MsG0480018278.01.T01:CDS |
| GATGCTTGTGTTAAGCTCAC+TGG | 0.515807 | 4:+2677119 | MsG0480018278.01.T01:CDS |
| AAACGGTATCGTTTCGGGAT+CGG | 0.523967 | 4:+2676028 | MsG0480018278.01.T01:CDS |
| TTTGTTGAGTTCAATGTCAC+GGG | 0.532965 | 4:-2678948 | None:intergenic |
| GATTAAGAAGGGGAAGGAGC+AGG | 0.533323 | 4:+2679117 | MsG0480018278.01.T01:CDS |
| TGTGGAAAAGTTTCACGAAA+CGG | 0.533408 | 4:+2676011 | MsG0480018278.01.T01:CDS |
| AGCATTGAGTAACAACTAGT+AGG | 0.545705 | 4:-2677197 | None:intergenic |
| GCATCAACAGGAATATTTGA+AGG | 0.547733 | 4:+2676933 | MsG0480018278.01.T01:CDS |
| GCAATAATCAAAGGTGAAGG+TGG | 0.569859 | 4:-2679152 | None:intergenic |
| GGAGAACCAAAGAAATGTGA+AGG | 0.579927 | 4:+2676954 | MsG0480018278.01.T01:CDS |
| AATCCAGAGCTAGAAGAAGC+TGG | 0.580761 | 4:-2679098 | None:intergenic |
| TGGTGAAGTGAGAAGTGTGA+TGG | 0.589295 | 4:+2677025 | MsG0480018278.01.T01:CDS |
| TCTAGCTCTGGATTAAGAAG+GGG | 0.590101 | 4:+2679107 | MsG0480018278.01.T01:CDS |
| CGTCGGAGAATGTTACTATG+TGG | 0.607728 | 4:+2675993 | MsG0480018278.01.T01:CDS |
| TAAACATCAAGATGAAGGGG+AGG | 0.607838 | 4:-2679174 | None:intergenic |
| ATAATCAAAGGTGAAGGTGG+AGG | 0.615233 | 4:-2679149 | None:intergenic |
| ATTAACAAGTGAACCAAACA+AGG | 0.618419 | 4:+2679037 | MsG0480018278.01.T01:CDS |
| GCTGGTGAAGATGCTCTCGA+AGG | 0.625072 | 4:-2679080 | None:intergenic |
| GAACTTGCTGCTGAGTACAA+AGG | 0.625237 | 4:+2677050 | MsG0480018278.01.T01:CDS |
| GAAGGGGAGGCAATAATCAA+AGG | 0.625643 | 4:-2679161 | None:intergenic |
| GCAAGACGATTAACCCAACT+AGG | 0.629110 | 4:-2677152 | None:intergenic |
| TACGATCTGACACAATTCAA+CGG | 0.645029 | 4:+2676071 | MsG0480018278.01.T01:CDS |
| GAGGCAATAATCAAAGGTGA+AGG | 0.662473 | 4:-2679155 | None:intergenic |
| TCGTACACGTTAAGATACAC+CGG | 0.689501 | 4:-2676053 | None:intergenic |
| GCTCTGGATTAAGAAGGGGA+AGG | 0.690217 | 4:+2679111 | MsG0480018278.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATGTATAATAAAAGT+AGG | + | Chr4:2678789-2678808 | MsG0480018278.01.T01:intron | 10.0% |
| !! | AAACAAAATATTATAATATG+CGG | + | Chr4:2677401-2677420 | MsG0480018278.01.T01:intron | 10.0% |
| !! | ATAAATTGAAATAATTAGTT+AGG | + | Chr4:2677280-2677299 | MsG0480018278.01.T01:intron | 10.0% |
| !! | TCTTAAATATAAGTAAAAAT+TGG | - | Chr4:2676510-2676529 | None:intergenic | 10.0% |
| !! | TTTATATGCATTTAAATATA+TGG | + | Chr4:2678507-2678526 | MsG0480018278.01.T01:intron | 10.0% |
| !!! | TTTACATTTAATTTAAAGAA+AGG | + | Chr4:2678359-2678378 | MsG0480018278.01.T01:intron | 10.0% |
| !! | AAAATGCAATTATAAAGATA+AGG | + | Chr4:2678406-2678425 | MsG0480018278.01.T01:intron | 15.0% |
| !! | AAAATTTGAATCAAATACAT+CGG | + | Chr4:2676473-2676492 | MsG0480018278.01.T01:intron | 15.0% |
| !!! | AAAAGTATTTTACAAGTATT+AGG | - | Chr4:2678296-2678315 | None:intergenic | 15.0% |
| !!! | ACAATCTTTTGATAAATTTT+AGG | + | Chr4:2677571-2677590 | MsG0480018278.01.T01:intron | 15.0% |
| !!! | ATTTCAATTTATTTGTTTCT+TGG | - | Chr4:2677272-2677291 | None:intergenic | 15.0% |
| !!! | CAAAAAATGTATTTTTTCTT+GGG | + | Chr4:2677871-2677890 | MsG0480018278.01.T01:intron | 15.0% |
| !!! | TCAAAAAATGTATTTTTTCT+TGG | + | Chr4:2677870-2677889 | MsG0480018278.01.T01:intron | 15.0% |
| !!! | TTTTTACTTATATTTAAGAC+CGG | + | Chr4:2676511-2676530 | MsG0480018278.01.T01:intron | 15.0% |
| !! | ACAAACTATAGAAAAGAAAT+TGG | + | Chr4:2677644-2677663 | MsG0480018278.01.T01:intron | 20.0% |
| !! | ACTTTATTACTTAGATTAGT+AGG | + | Chr4:2676619-2676638 | MsG0480018278.01.T01:intron | 20.0% |
| !! | CTCTTTGTAACAAAAAAAAT+AGG | + | Chr4:2678759-2678778 | MsG0480018278.01.T01:intron | 20.0% |
| !! | CTTTATTACTTAGATTAGTA+GGG | + | Chr4:2676620-2676639 | MsG0480018278.01.T01:intron | 20.0% |
| !! | TAAAAATTACTAATCTACGT+TGG | + | Chr4:2677930-2677949 | MsG0480018278.01.T01:intron | 20.0% |
| !! | TAAAATAATACAACCAACAA+TGG | - | Chr4:2678049-2678068 | None:intergenic | 20.0% |
| !! | TTCGGAAAAATTAAGAATTA+AGG | - | Chr4:2676176-2676195 | None:intergenic | 20.0% |
| !!! | ATAAATTTTAGGCTGAATTT+TGG | + | Chr4:2677582-2677601 | MsG0480018278.01.T01:intron | 20.0% |
| !!! | CTTTAAAGATTTCAAATACA+CGG | + | Chr4:2676430-2676449 | MsG0480018278.01.T01:intron | 20.0% |
| !!! | GATCAAGTCAAATTTTTTAT+TGG | + | Chr4:2677821-2677840 | MsG0480018278.01.T01:intron | 20.0% |
| !!! | GATTGATATTTGAAATTTTG+AGG | + | Chr4:2676722-2676741 | MsG0480018278.01.T01:intron | 20.0% |
| !!! | TTTATTTGTTTTTCAGTTCA+TGG | + | Chr4:2676879-2676898 | MsG0480018278.01.T01:intron | 20.0% |
| ! | AAAATGTGAATAGATGATGT+GGG | + | Chr4:2678208-2678227 | MsG0480018278.01.T01:intron | 25.0% |
| ! | AAATGAAACATTGACCAATT+TGG | - | Chr4:2677380-2677399 | None:intergenic | 25.0% |
| ! | AACATTGCTTATATTATTGC+AGG | + | Chr4:2678903-2678922 | MsG0480018278.01.T01:CDS | 25.0% |
| ! | AAGCAATGTTTATCTCAATA+AGG | - | Chr4:2678893-2678912 | None:intergenic | 25.0% |
| ! | AATAATTAGTTAGGTGAAAG+TGG | + | Chr4:2677289-2677308 | MsG0480018278.01.T01:intron | 25.0% |
| ! | AATGATTGGAAAAACAGATA+TGG | + | Chr4:2676998-2677017 | MsG0480018278.01.T01:CDS | 25.0% |
| ! | ATAATTAGTTAGGTGAAAGT+GGG | + | Chr4:2677290-2677309 | MsG0480018278.01.T01:intron | 25.0% |
| ! | ATATCCAAAACAGGAAAAAA+AGG | - | Chr4:2677230-2677249 | None:intergenic | 25.0% |
| ! | ATTATAAGTCTTTCACCATT+TGG | + | Chr4:2678017-2678036 | MsG0480018278.01.T01:intron | 25.0% |
| ! | ATTTCGATTTCTAAACGAAA+TGG | - | Chr4:2676647-2676666 | None:intergenic | 25.0% |
| ! | TATACGCAATTAAATGACAT+TGG | + | Chr4:2678263-2678282 | MsG0480018278.01.T01:intron | 25.0% |
| ! | TCCCATGTATAAAAAAATGT+GGG | + | Chr4:2678608-2678627 | MsG0480018278.01.T01:intron | 25.0% |
| ! | TCTAGCTAAAGATGAATAAT+TGG | + | Chr4:2676554-2676573 | MsG0480018278.01.T01:intron | 25.0% |
| ! | TCTTGTACGTACAAATTATA+TGG | + | Chr4:2678638-2678657 | MsG0480018278.01.T01:intron | 25.0% |
| ! | TTCCCATGTATAAAAAAATG+TGG | + | Chr4:2678607-2678626 | MsG0480018278.01.T01:intron | 25.0% |
| ! | TTTACTCAACGTTGAATTTA+CGG | + | Chr4:2676279-2676298 | MsG0480018278.01.T01:intron | 25.0% |
| ! | TTTAGAAAGACAGTAATGAT+TGG | + | Chr4:2676984-2677003 | MsG0480018278.01.T01:CDS | 25.0% |
| !! | AATCAAATACATCGGATTTT+TGG | + | Chr4:2676481-2676500 | MsG0480018278.01.T01:intron | 25.0% |
| !! | ATGTGGAAAATTTTCATGAT+GGG | + | Chr4:2676222-2676241 | MsG0480018278.01.T01:intron | 25.0% |
| !! | TATGTGGAAAATTTTCATGA+TGG | + | Chr4:2676221-2676240 | MsG0480018278.01.T01:intron | 25.0% |
| !!! | GAGATTATAGTTGATAATGA+TGG | + | Chr4:2677786-2677805 | MsG0480018278.01.T01:intron | 25.0% |
| !!! | TAATGAGTTTCTTTTTGACT+AGG | + | Chr4:2677522-2677541 | MsG0480018278.01.T01:intron | 25.0% |
| !!! | TCCCACATTTTTTTATACAT+GGG | - | Chr4:2678612-2678631 | None:intergenic | 25.0% |
| !!! | TTCCCACATTTTTTTATACA+TGG | - | Chr4:2678613-2678632 | None:intergenic | 25.0% |
| AAGAGAAGAAAAAACATCGT+CGG | + | Chr4:2675976-2675995 | MsG0480018278.01.T01:CDS | 30.0% | |
| ACATGATCAATATCCAAAAC+AGG | - | Chr4:2677239-2677258 | None:intergenic | 30.0% | |
| ATTAACAAGTGAACCAAACA+AGG | + | Chr4:2679037-2679056 | MsG0480018278.01.T01:CDS | 30.0% | |
| CTTGAAACATTAACCTTGTT+TGG | - | Chr4:2679053-2679072 | None:intergenic | 30.0% | |
| GAAAATGTGAATAGATGATG+TGG | + | Chr4:2678207-2678226 | MsG0480018278.01.T01:intron | 30.0% | |
| GGAAAAACAGATATGGAAAT+TGG | + | Chr4:2677005-2677024 | MsG0480018278.01.T01:CDS | 30.0% | |
| GGTGATAGATATCTTAATTC+CGG | - | Chr4:2678872-2678891 | None:intergenic | 30.0% | |
| TAATACAACCAACAATGGAT+TGG | - | Chr4:2678044-2678063 | None:intergenic | 30.0% | |
| TGGAAATTCTATACCTAGTT+GGG | + | Chr4:2677139-2677158 | MsG0480018278.01.T01:CDS | 30.0% | |
| ! | ACTTGCTTTAGATCTAATCT+AGG | + | Chr4:2676195-2676214 | MsG0480018278.01.T01:intron | 30.0% |
| ! | ATTAGTCACTTTCACTAACT+TGG | - | Chr4:2677506-2677525 | None:intergenic | 30.0% |
| ! | GAACTTTTATGCTAAACTTC+CGG | + | Chr4:2678850-2678869 | MsG0480018278.01.T01:intron | 30.0% |
| ! | GATTAGATCTAAAGCAAGTT+CGG | - | Chr4:2676194-2676213 | None:intergenic | 30.0% |
| ! | TTTCTCTCTTTCTAAAAGTG+TGG | + | Chr4:2676245-2676264 | MsG0480018278.01.T01:intron | 30.0% |
| ! | TTTTGTTGAGTTCAATGTCA+CGG | - | Chr4:2678952-2678971 | None:intergenic | 30.0% |
| !! | TGTTTTGGATATTGATCATG+TGG | + | Chr4:2677238-2677257 | MsG0480018278.01.T01:intron | 30.0% |
| !!! | GACTCGAAACAATTTTTTGT+CGG | + | Chr4:2676596-2676615 | MsG0480018278.01.T01:intron | 30.0% |
| !!! | TCTTCCTTTTTTTCCTGTTT+TGG | + | Chr4:2677223-2677242 | MsG0480018278.01.T01:intron | 30.0% |
| AAATACGCCACACATATCAA+CGG | - | Chr4:2678730-2678749 | None:intergenic | 35.0% | |
| AACTTTCCTATTCCGAGAAA+AGG | - | Chr4:2677618-2677637 | None:intergenic | 35.0% | |
| AATCCTTAAACACGTGATCA+GGG | - | Chr4:2678000-2678019 | None:intergenic | 35.0% | |
| AATTCAACGGTTATGCTTAC+TGG | + | Chr4:2676084-2676103 | MsG0480018278.01.T01:CDS | 35.0% | |
| ACTTTCCTATTCCGAGAAAA+GGG | - | Chr4:2677617-2677636 | None:intergenic | 35.0% | |
| AGCTAGAATTCATCACCATT+TGG | - | Chr4:2676541-2676560 | None:intergenic | 35.0% | |
| AGCTGTTGTGAAGAAGATTT+GGG | + | Chr4:2677718-2677737 | MsG0480018278.01.T01:intron | 35.0% | |
| ATCAAAATCCTCAAGACCAT+TGG | + | Chr4:2678134-2678153 | MsG0480018278.01.T01:intron | 35.0% | |
| ATCAGAGATATCATAGTCGT+TGG | - | Chr4:2677449-2677468 | None:intergenic | 35.0% | |
| ATTAGGCAAATAGTCTCCAA+TGG | - | Chr4:2678153-2678172 | None:intergenic | 35.0% | |
| CAAATTCAACGTGTAGCATT+AGG | - | Chr4:2678170-2678189 | None:intergenic | 35.0% | |
| CACAAGCATCATTGCAAAAA+TGG | - | Chr4:2677109-2677128 | None:intergenic | 35.0% | |
| CTGAATCCTTCACATTTCTT+TGG | - | Chr4:2676963-2676982 | None:intergenic | 35.0% | |
| CTGGAAATTCTATACCTAGT+TGG | + | Chr4:2677138-2677157 | MsG0480018278.01.T01:CDS | 35.0% | |
| GCATCAACAGGAATATTTGA+AGG | + | Chr4:2676933-2676952 | MsG0480018278.01.T01:CDS | 35.0% | |
| GTTAATCGTCTTGCTAGAAT+TGG | + | Chr4:2677161-2677180 | MsG0480018278.01.T01:CDS | 35.0% | |
| GTTTATCATTCTGGTGTTCA+AGG | + | Chr4:2676119-2676138 | MsG0480018278.01.T01:CDS | 35.0% | |
| TAATCCTTAAACACGTGATC+AGG | - | Chr4:2678001-2678020 | None:intergenic | 35.0% | |
| TACGATCTGACACAATTCAA+CGG | + | Chr4:2676071-2676090 | MsG0480018278.01.T01:CDS | 35.0% | |
| TAGCTGTTGTGAAGAAGATT+TGG | + | Chr4:2677717-2677736 | MsG0480018278.01.T01:intron | 35.0% | |
| TGTGGAAAAGTTTCACGAAA+CGG | + | Chr4:2676011-2676030 | MsG0480018278.01.T01:CDS | 35.0% | |
| TTCATCACCATTTGGTTATC+CGG | - | Chr4:2676533-2676552 | None:intergenic | 35.0% | |
| TTTGTTGAGTTCAATGTCAC+GGG | - | Chr4:2678951-2678970 | None:intergenic | 35.0% | |
| ! | AGCATTGAGTAACAACTAGT+AGG | - | Chr4:2677200-2677219 | None:intergenic | 35.0% |
| ! | CATGGTGTTGAATATGCATT+TGG | + | Chr4:2676897-2676916 | MsG0480018278.01.T01:CDS | 35.0% |
| ! | GAAATCTTTAAAGATTGCCC+CGG | - | Chr4:2676423-2676442 | None:intergenic | 35.0% |
| ! | GATCTAATCTAGGATCTATG+TGG | + | Chr4:2676205-2676224 | MsG0480018278.01.T01:intron | 35.0% |
| ! | TGCTACACGTTGAATTTGTT+AGG | + | Chr4:2678172-2678191 | MsG0480018278.01.T01:intron | 35.0% |
| ! | TTTAAGACCGGATAACCAAA+TGG | + | Chr4:2676523-2676542 | MsG0480018278.01.T01:intron | 35.0% |
| !! | GGGAGAGTTACTTTAGAATT+AGG | + | Chr4:2678228-2678247 | MsG0480018278.01.T01:intron | 35.0% |
| !! | TTCTAGCTCTGGATTAAGAA+GGG | + | Chr4:2679106-2679125 | MsG0480018278.01.T01:CDS | 35.0% |
| ATAATCAAAGGTGAAGGTGG+AGG | - | Chr4:2679152-2679171 | None:intergenic | 40.0% | |
| ATCCTTAAACACGTGATCAG+GGG | - | Chr4:2677999-2678018 | None:intergenic | 40.0% | |
| CATTTGGACCAATCCATTGT+TGG | + | Chr4:2678033-2678052 | MsG0480018278.01.T01:intron | 40.0% | |
| CTTTCCTATTCCGAGAAAAG+GGG | - | Chr4:2677616-2677635 | None:intergenic | 40.0% | |
| GAGGCAATAATCAAAGGTGA+AGG | - | Chr4:2679158-2679177 | None:intergenic | 40.0% | |
| GCAATAATCAAAGGTGAAGG+TGG | - | Chr4:2679155-2679174 | None:intergenic | 40.0% | |
| GGAGAACCAAAGAAATGTGA+AGG | + | Chr4:2676954-2676973 | MsG0480018278.01.T01:CDS | 40.0% | |
| TCGTACACGTTAAGATACAC+CGG | - | Chr4:2676056-2676075 | None:intergenic | 40.0% | |
| TTCACGAAACGGTATCGTTT+CGG | + | Chr4:2676022-2676041 | MsG0480018278.01.T01:CDS | 40.0% | |
| TTCTTAGCCGTTGATATGTG+TGG | + | Chr4:2678720-2678739 | MsG0480018278.01.T01:intron | 40.0% | |
| ! | AACGGTTATGCTTACTGGTT+TGG | + | Chr4:2676089-2676108 | MsG0480018278.01.T01:CDS | 40.0% |
| ! | AATAGTCTCCAATGGTCTTG+AGG | - | Chr4:2678145-2678164 | None:intergenic | 40.0% |
| !! | CAACAATGGATTGGTCCAAA+TGG | - | Chr4:2678035-2678054 | None:intergenic | 40.0% |
| !! | CTTCTAGCTCTGGATTAAGA+AGG | + | Chr4:2679105-2679124 | MsG0480018278.01.T01:CDS | 40.0% |
| !! | GGTCTTGGTGTTTATCATTC+TGG | + | Chr4:2676110-2676129 | MsG0480018278.01.T01:CDS | 40.0% |
| !! | TATGCTTACTGGTTTGGTCT+TGG | + | Chr4:2676095-2676114 | MsG0480018278.01.T01:CDS | 40.0% |
| !! | TCTAGCTCTGGATTAAGAAG+GGG | + | Chr4:2679107-2679126 | MsG0480018278.01.T01:CDS | 40.0% |
| AAACGGTATCGTTTCGGGAT+CGG | + | Chr4:2676028-2676047 | MsG0480018278.01.T01:CDS | 45.0% | |
| AACCCCTGATCACGTGTTTA+AGG | + | Chr4:2677994-2678013 | MsG0480018278.01.T01:intron | 45.0% | |
| AAGTGGGAGCAACATGTAAG+CGG | + | Chr4:2677306-2677325 | MsG0480018278.01.T01:intron | 45.0% | |
| AATCCAGAGCTAGAAGAAGC+TGG | - | Chr4:2679101-2679120 | None:intergenic | 45.0% | |
| ACATTTGTCATGCGTGACGT+AGG | + | Chr4:2678676-2678695 | MsG0480018278.01.T01:intron | 45.0% | |
| CATAGTCGTTGGATCGAGAT+TGG | - | Chr4:2677438-2677457 | None:intergenic | 45.0% | |
| CGTCGGAGAATGTTACTATG+TGG | + | Chr4:2675993-2676012 | MsG0480018278.01.T01:CDS | 45.0% | |
| GAAGGGGAGGCAATAATCAA+AGG | - | Chr4:2679164-2679183 | None:intergenic | 45.0% | |
| GATGCTTGTGTTAAGCTCAC+TGG | + | Chr4:2677119-2677138 | MsG0480018278.01.T01:CDS | 45.0% | |
| GCAAGACGATTAACCCAACT+AGG | - | Chr4:2677155-2677174 | None:intergenic | 45.0% | |
| GCACATGAGTATGCATCAAC+AGG | + | Chr4:2676921-2676940 | MsG0480018278.01.T01:CDS | 45.0% | |
| TCACGAAACGGTATCGTTTC+GGG | + | Chr4:2676023-2676042 | MsG0480018278.01.T01:CDS | 45.0% | |
| ! | AAACACGTGATCAGGGGTTT+TGG | - | Chr4:2677993-2678012 | None:intergenic | 45.0% |
| ! | AACACGTGATCAGGGGTTTT+GGG | - | Chr4:2677992-2678011 | None:intergenic | 45.0% |
| ! | GGCATATAAGCCCCTTTTCT+CGG | + | Chr4:2677603-2677622 | MsG0480018278.01.T01:intron | 45.0% |
| ! | TAAGCCCCTTTTCTCGGAAT+AGG | + | Chr4:2677609-2677628 | MsG0480018278.01.T01:intron | 45.0% |
| ! | TGGTGAAGTGAGAAGTGTGA+TGG | + | Chr4:2677025-2677044 | MsG0480018278.01.T01:CDS | 45.0% |
| ! | TGTAAGCGGTGATGGTACAT+CGG | + | Chr4:2677320-2677339 | MsG0480018278.01.T01:intron | 45.0% |
| !! | GAACTTGCTGCTGAGTACAA+AGG | + | Chr4:2677050-2677069 | MsG0480018278.01.T01:CDS | 45.0% |
| !! | GGATCGAGATTGGTCTAGAT+TGG | - | Chr4:2677428-2677447 | None:intergenic | 45.0% |
| !!! | AATTCTTTTTTATTAAAAAA+TGG | + | Chr4:2676820-2676839 | MsG0480018278.01.T01:intron | 5.0% |
| !!! | ATTCTTTTTTATTAAAAAAT+GGG | + | Chr4:2676821-2676840 | MsG0480018278.01.T01:intron | 5.0% |
| CGAGATCAGACGGTCCAAAT+TGG | + | Chr4:2677363-2677382 | MsG0480018278.01.T01:intron | 50.0% | |
| GAGCAACATGTAAGCGGTGA+TGG | + | Chr4:2677312-2677331 | MsG0480018278.01.T01:intron | 50.0% | |
| GATTAAGAAGGGGAAGGAGC+AGG | + | Chr4:2679117-2679136 | MsG0480018278.01.T01:CDS | 50.0% | |
| ! | ACGTCTTGCTATCGAGTGTC+CGG | + | Chr4:2676401-2676420 | MsG0480018278.01.T01:intron | 50.0% |
| ! | GCTCTGGATTAAGAAGGGGA+AGG | + | Chr4:2679111-2679130 | MsG0480018278.01.T01:CDS | 50.0% |
| !! | TCACCAGCTTCTTCTAGCTC+TGG | + | Chr4:2679095-2679114 | MsG0480018278.01.T01:CDS | 50.0% |
| ATCGGAGGTTGTTGCCCACT+TGG | + | Chr4:2677338-2677357 | MsG0480018278.01.T01:intron | 55.0% | |
| CCACTTGGGTCGAGATCAGA+CGG | + | Chr4:2677353-2677372 | MsG0480018278.01.T01:intron | 55.0% | |
| CGTCTGATCTCGACCCAAGT+GGG | - | Chr4:2677355-2677374 | None:intergenic | 55.0% | |
| GCTGGTGAAGATGCTCTCGA+AGG | - | Chr4:2679083-2679102 | None:intergenic | 55.0% | |
| TATCGTTTCGGGATCGGTGC+CGG | + | Chr4:2676034-2676053 | MsG0480018278.01.T01:CDS | 55.0% | |
| TCGGAGGTTGTTGCCCACTT+GGG | + | Chr4:2677339-2677358 | MsG0480018278.01.T01:intron | 55.0% | |
| ! | AAGCGGTGATGGTACATCGG+AGG | + | Chr4:2677323-2677342 | MsG0480018278.01.T01:intron | 55.0% |
| ! | CGTCTTGCTATCGAGTGTCC+GGG | + | Chr4:2676402-2676421 | MsG0480018278.01.T01:intron | 55.0% |
| ! | GTCTTGCTATCGAGTGTCCG+GGG | + | Chr4:2676403-2676422 | MsG0480018278.01.T01:intron | 55.0% |
| CCGTCTGATCTCGACCCAAG+TGG | - | Chr4:2677356-2677375 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 2675972 | 2679190 | 2675972 | ID=MsG0480018278.01;Name=MsG0480018278.01 |
| Chr4 | mRNA | 2675972 | 2679190 | 2675972 | ID=MsG0480018278.01.T01;Parent=MsG0480018278.01;Name=MsG0480018278.01.T01;_AED=0.46;_eAED=0.50;_QI=0|0|0|1|0.5|0.33|3|0|263 |
| Chr4 | exon | 2675972 | 2676140 | 2675972 | ID=MsG0480018278.01.T01:exon:806;Parent=MsG0480018278.01.T01 |
| Chr4 | exon | 2676895 | 2677206 | 2676895 | ID=MsG0480018278.01.T01:exon:807;Parent=MsG0480018278.01.T01 |
| Chr4 | exon | 2678880 | 2679190 | 2678880 | ID=MsG0480018278.01.T01:exon:808;Parent=MsG0480018278.01.T01 |
| Chr4 | CDS | 2675972 | 2676140 | 2675972 | ID=MsG0480018278.01.T01:cds;Parent=MsG0480018278.01.T01 |
| Chr4 | CDS | 2676895 | 2677206 | 2676895 | ID=MsG0480018278.01.T01:cds;Parent=MsG0480018278.01.T01 |
| Chr4 | CDS | 2678880 | 2679190 | 2678880 | ID=MsG0480018278.01.T01:cds;Parent=MsG0480018278.01.T01 |
| Gene Sequence |
| Protein sequence |
