AlfalfaGEDB | MsG0380017565.01

M. sativa cultivar ZhongmuNo.1 / MsG0380017565.01

KEGG: K14488
GO: GO:0009733
PFAM: PF02519

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017565.01.T01	XP_003603566.1	98.246	171	3	0	1	171	1	171	1.68E-121	350

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017565.01.T01	Q9LTV3	33.913	115	72	2	16	130	1	111	2.01E-17	77

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017565.01.T01	G7J2U8	98.246	171	3	0	1	171	1	171	8.03e-122	350

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048889.01	MsG0380017565.01	0.806585	7.660601e-50	4.173495e-47
MsG0080048980.01	MsG0380017565.01	0.854393	1.268135e-61	2.827834e-58
MsG0180000497.01	MsG0380017565.01	0.805268	1.449084e-49	7.632742e-47
MsG0180001027.01	MsG0380017565.01	0.811477	6.866180e-51	4.254649e-48
MsG0180001513.01	MsG0380017565.01	0.826759	2.274150e-54	2.152283e-51
MsG0180005417.01	MsG0380017565.01	0.803262	3.790711e-49	1.896298e-46
MsG0280010936.01	MsG0380017565.01	0.802697	4.960162e-49	2.445903e-46
MsG0280011236.01	MsG0380017565.01	0.827356	1.636822e-54	1.576634e-51
MsG0280011238.01	MsG0380017565.01	0.821703	3.507447e-53	2.874871e-50
MsG0280011267.01	MsG0380017565.01	0.806163	9.399584e-50	5.066374e-47
MsG0280011269.01	MsG0380017565.01	0.803732	3.029039e-49	1.533722e-46
MsG0380011635.01	MsG0380017565.01	0.803098	4.099111e-49	2.041896e-46
MsG0380011968.01	MsG0380017565.01	0.829308	5.536012e-55	5.645458e-52
MsG0380011974.01	MsG0380017565.01	0.828885	7.011633e-55	7.059636e-52
MsG0380012889.01	MsG0380017565.01	0.814927	1.200655e-51	8.162796e-49
MsG0380015323.01	MsG0380017565.01	0.808859	2.518157e-50	1.455739e-47
MsG0380015660.01	MsG0380017565.01	0.807150	5.818226e-50	3.216405e-47
MsG0380015711.01	MsG0380017565.01	0.807697	4.453699e-50	2.497325e-47
MsG0380017030.01	MsG0380017565.01	0.804591	2.007544e-49	1.039169e-46
MsG0380017565.01	MsG0380017901.01	0.801773	7.685562e-49	3.701516e-46
MsG0380017565.01	MsG0480018563.01	0.825459	4.633519e-54	4.225644e-51
MsG0380017565.01	MsG0480019146.01	0.814474	1.512263e-51	1.015774e-48
MsG0380017565.01	MsG0480019842.01	0.818725	1.687209e-52	1.272958e-49
MsG0380017565.01	MsG0480021360.01	0.811795	5.855672e-51	3.659014e-48
MsG0380017565.01	MsG0480021361.01	0.833116	6.413726e-56	7.316247e-53
MsG0380017565.01	MsG0480021396.01	0.806280	8.880500e-50	4.800739e-47
MsG0380017565.01	MsG0480021433.01	0.824539	7.643276e-54	6.789841e-51
MsG0380017565.01	MsG0480022428.01	0.846037	2.792382e-59	4.744552e-56
MsG0380017565.01	MsG0480022833.01	0.820886	5.411330e-53	4.335525e-50
MsG0380017565.01	MsG0480023100.01	0.828394	9.210495e-55	9.143668e-52
MsG0380017565.01	MsG0580025431.01	0.805640	1.210543e-49	6.437866e-47
MsG0380017565.01	MsG0580025432.01	0.814435	1.542586e-51	1.035027e-48
MsG0380017565.01	MsG0580025590.01	0.816765	4.670807e-52	3.339450e-49
MsG0380017565.01	MsG0580028490.01	0.808684	2.744123e-50	1.579066e-47
MsG0380017565.01	MsG0580029240.01	0.813081	3.065770e-51	1.982618e-48
MsG0380017565.01	MsG0580029296.01	0.805624	1.220263e-49	6.486759e-47
MsG0380017565.01	MsG0680030296.01	0.807487	4.936126e-50	2.752842e-47
MsG0380017565.01	MsG0680030613.01	0.802827	4.662756e-49	2.307036e-46
MsG0380017565.01	MsG0680030635.01	-0.802223	6.212506e-49	3.026535e-46
MsG0380017565.01	MsG0680031684.01	0.807413	5.117356e-50	2.848498e-47
MsG0380017565.01	MsG0680034945.01	0.805516	1.285514e-49	6.814473e-47
MsG0380017565.01	MsG0680035584.01	-0.802954	4.389858e-49	2.178781e-46
MsG0380017565.01	MsG0780036367.01	0.811151	8.079634e-51	4.963643e-48
MsG0380017565.01	MsG0780036480.01	0.808629	2.819813e-50	1.620270e-47
MsG0380017565.01	MsG0780036839.01	0.823816	1.129637e-53	9.831931e-51
MsG0380017565.01	MsG0780038305.01	0.813615	2.340078e-51	1.535559e-48
MsG0380017565.01	MsG0780038519.01	0.811833	5.744866e-51	3.593366e-48
MsG0380017565.01	MsG0780039979.01	0.826539	2.565851e-54	2.413177e-51
MsG0380017565.01	MsG0780040498.01	0.820328	7.268345e-53	5.733279e-50
MsG0380017565.01	MsG0780040784.01	0.809500	1.835019e-50	1.079168e-47
MsG0380017565.01	MsG0780040977.01	0.812158	4.880101e-51	3.079579e-48
MsG0380017565.01	MsG0780041180.01	0.805724	1.162689e-49	6.197066e-47
MsG0380017565.01	MsG0880042122.01	0.811426	7.043273e-51	4.358577e-48
MsG0380017565.01	MsG0880043212.01	0.813690	2.253044e-51	1.481437e-48
MsG0380017565.01	MsG0880043217.01	0.821249	4.464721e-53	3.613102e-50
MsG0380017565.01	MsG0880043481.01	0.804961	1.680163e-49	8.781108e-47
MsG0380017565.01	MsG0880045852.01	0.804357	2.245394e-49	1.155352e-46
MsG0380017565.01	MsG0880046271.01	0.828277	9.833353e-55	9.727957e-52
MsG0380017565.01	MsG0880047500.01	0.818239	2.174620e-52	1.618748e-49
MsG0380017565.01	MsG0880047714.01	0.813779	2.153935e-51	1.419623e-48
MsG0280006546.01	MsG0380017565.01	0.823473	1.359380e-53	1.171591e-50
MsG0280006559.01	MsG0380017565.01	0.839080	1.962367e-57	2.680295e-54
MsG0280007786.01	MsG0380017565.01	0.806756	7.049535e-50	3.857490e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017565.01.T01	MTR_3g109160	98.246	171	3	0	1	171	1	171	2.04e-125	350
MsG0380017565.01.T01	MTR_1g009150	70.056	177	40	5	5	171	6	179	9.82e-80	234
MsG0380017565.01.T01	MTR_4g005320	61.029	136	45	2	5	135	4	136	2.56e-45	147
MsG0380017565.01.T01	MTR_4g021810	71.287	101	22	3	48	141	1	101	2.68e-41	134
MsG0380017565.01.T01	MTR_2g043960	43.609	133	70	2	10	137	12	144	3.10e-30	108
MsG0380017565.01.T01	MTR_4g124750	38.710	124	71	2	14	133	11	133	3.68e-23	90.1
MsG0380017565.01.T01	MTR_1g024085	34.615	156	64	3	6	153	4	129	5.28e-23	89.4
MsG0380017565.01.T01	MTR_4g072160	36.567	134	49	2	8	140	11	109	1.83e-18	77.4
MsG0380017565.01.T01	MTR_2g066830	33.613	119	75	1	16	130	1	119	2.77e-17	74.3
MsG0380017565.01.T01	MTR_4g072570	47.500	80	41	1	56	134	12	91	5.21e-17	72.4
MsG0380017565.01.T01	MTR_3g084240	55.224	67	29	1	69	134	25	91	1.52e-16	71.2
MsG0380017565.01.T01	MTR_4g072910	54.430	79	34	2	51	128	18	95	1.72e-16	71.2
MsG0380017565.01.T01	MTR_3g084170	55.224	67	29	1	69	134	25	91	2.01e-16	70.9
MsG0380017565.01.T01	MTR_4g050700	53.731	67	30	1	69	134	26	92	3.13e-16	70.5
MsG0380017565.01.T01	MTR_2g012410	53.731	67	30	1	69	134	26	92	3.13e-16	70.5
MsG0380017565.01.T01	MTR_7g405740	32.576	132	85	2	15	146	15	142	4.57e-16	71.6
MsG0380017565.01.T01	MTR_3g098970	30.061	163	92	5	10	167	4	149	7.54e-16	70.9
MsG0380017565.01.T01	MTR_8g461210	48.485	66	34	0	67	132	33	98	8.71e-16	69.7
MsG0380017565.01.T01	MTR_4g072190	41.667	84	46	1	49	132	19	99	9.60e-16	69.3
MsG0380017565.01.T01	MTR_4g072370	55.738	61	26	1	69	128	23	83	1.06e-15	68.9
MsG0380017565.01.T01	MTR_4g072330	55.738	61	26	1	69	128	23	83	1.09e-15	68.9
MsG0380017565.01.T01	MTR_3g084150	45.882	85	44	2	51	134	8	91	1.19e-15	68.9
MsG0380017565.01.T01	MTR_3g084180	45.882	85	44	2	51	134	8	91	1.29e-15	68.6
MsG0380017565.01.T01	MTR_8g461410	50.746	67	32	1	69	134	25	91	4.19e-15	67.4
MsG0380017565.01.T01	MTR_4g072690	54.839	62	27	1	68	128	19	80	4.44e-15	67.0
MsG0380017565.01.T01	MTR_3g117610	46.875	64	34	0	69	132	45	108	4.50e-15	67.8
MsG0380017565.01.T01	MTR_5g008370	42.857	91	48	2	48	134	1	91	5.13e-15	68.6
MsG0380017565.01.T01	MTR_3g110042	57.377	61	25	1	69	128	25	85	5.25e-15	67.4
MsG0380017565.01.T01	MTR_4g072240	44.304	79	43	1	51	128	8	86	6.20e-15	67.0
MsG0380017565.01.T01	MTR_3g092220	38.000	100	56	2	36	133	4	99	6.66e-15	67.4
MsG0380017565.01.T01	MTR_4g072740	48.052	77	39	1	53	128	4	80	6.80e-15	66.6
MsG0380017565.01.T01	MTR_3g084220	52.239	67	31	1	69	134	25	91	7.87e-15	66.6
MsG0380017565.01.T01	MTR_3g113310	39.326	89	49	1	49	132	17	105	9.32e-15	67.0
MsG0380017565.01.T01	MTR_4g072880	49.254	67	33	1	69	134	26	92	1.04e-14	66.2
MsG0380017565.01.T01	MTR_8g026730	44.118	68	36	1	68	133	26	93	1.14e-14	66.6
MsG0380017565.01.T01	MTR_4g072870	47.368	76	38	2	51	125	9	83	1.49e-14	65.9
MsG0380017565.01.T01	MTR_5g021820	40.230	87	49	1	49	132	17	103	1.51e-14	66.2
MsG0380017565.01.T01	MTR_4g072500	43.373	83	46	1	53	134	9	91	1.63e-14	65.9
MsG0380017565.01.T01	MTR_4g072610	55.738	61	26	1	69	128	19	79	1.73e-14	65.5
MsG0380017565.01.T01	MTR_4g072220	45.570	79	42	1	51	128	8	86	1.88e-14	65.9
MsG0380017565.01.T01	MTR_4g072470	45.455	77	41	1	53	128	4	80	1.98e-14	65.5
MsG0380017565.01.T01	MTR_4g072250	53.731	67	29	2	69	134	26	91	2.01e-14	65.5
MsG0380017565.01.T01	MTR_4g072940	55.738	61	26	1	69	128	57	117	2.09e-14	66.6
MsG0380017565.01.T01	MTR_4g072640	45.455	77	41	1	53	128	9	85	2.15e-14	65.5
MsG0380017565.01.T01	MTR_4g072480	43.750	80	44	1	56	134	12	91	2.31e-14	65.5
MsG0380017565.01.T01	MTR_1g059770	42.029	69	40	0	65	133	45	113	2.32e-14	66.6
MsG0380017565.01.T01	MTR_4g072650	54.098	61	27	1	69	128	19	79	2.49e-14	65.1
MsG0380017565.01.T01	MTR_3g084250	56.897	58	24	1	69	125	25	82	2.80e-14	65.1
MsG0380017565.01.T01	MTR_4g072300	42.683	82	46	1	48	128	5	86	3.38e-14	65.1
MsG0380017565.01.T01	MTR_3g110032	44.578	83	45	1	53	134	10	92	4.49e-14	64.7
MsG0380017565.01.T01	MTR_4g072680	42.500	80	45	1	56	134	12	91	4.57e-14	64.7
MsG0380017565.01.T01	MTR_4g072460	42.500	80	45	1	56	134	12	91	4.77e-14	64.7
MsG0380017565.01.T01	MTR_4g072260	46.053	76	40	1	51	125	8	83	4.94e-14	64.7
MsG0380017565.01.T01	MTR_4g072660	50.746	67	32	1	69	134	20	86	5.32e-14	64.3
MsG0380017565.01.T01	MTR_7g118010	47.059	68	34	1	68	133	22	89	7.64e-14	64.3
MsG0380017565.01.T01	MTR_4g072310	43.373	83	46	1	53	134	10	92	7.65e-14	64.3
MsG0380017565.01.T01	MTR_4g072720	54.098	61	27	1	69	128	21	81	7.94e-14	63.9
MsG0380017565.01.T01	MTR_4g072890	47.887	71	36	1	51	120	8	78	8.27e-14	63.9
MsG0380017565.01.T01	MTR_8g101520	32.540	126	65	2	5	130	6	111	8.76e-14	65.9
MsG0380017565.01.T01	MTR_3g110038	54.098	61	27	1	69	128	25	85	8.94e-14	63.9
MsG0380017565.01.T01	MTR_4g072530	44.156	77	42	1	53	128	9	85	8.97e-14	63.9
MsG0380017565.01.T01	MTR_4g072620	42.500	80	45	1	56	134	12	91	9.23e-14	63.9
MsG0380017565.01.T01	MTR_4g072490	44.156	77	42	1	53	128	4	80	9.69e-14	63.5
MsG0380017565.01.T01	MTR_4g072560	45.349	86	43	3	50	133	15	98	1.09e-13	63.9
MsG0380017565.01.T01	MTR_4g072270	42.169	83	47	1	53	134	10	92	1.09e-13	63.9
MsG0380017565.01.T01	MTR_4g072820	53.333	60	27	1	67	125	18	77	1.19e-13	63.5
MsG0380017565.01.T01	MTR_3g084260	55.172	58	25	1	69	125	26	83	1.20e-13	63.5
MsG0380017565.01.T01	MTR_4g072630	51.613	62	29	1	69	129	21	82	1.43e-13	63.2
MsG0380017565.01.T01	MTR_1g061570	46.970	66	35	0	69	134	19	84	1.66e-13	64.3
MsG0380017565.01.T01	MTR_4g072510	52.459	61	28	1	69	128	21	81	1.69e-13	63.2
MsG0380017565.01.T01	MTR_3g117630	55.738	61	26	1	69	128	25	85	2.05e-13	63.2
MsG0380017565.01.T01	MTR_7g104940	45.161	62	34	0	72	133	53	114	2.28e-13	63.9
MsG0380017565.01.T01	MTR_4g072730	47.761	67	34	1	69	134	25	91	2.28e-13	62.8
MsG0380017565.01.T01	MTR_4g072540	52.459	61	28	1	69	128	21	81	3.27e-13	62.4
MsG0380017565.01.T01	MTR_8g101530	45.714	70	38	0	67	136	38	107	3.42e-13	63.9
MsG0380017565.01.T01	MTR_4g072450	51.613	62	29	1	68	128	19	80	4.44e-13	62.0
MsG0380017565.01.T01	MTR_8g076040	36.782	87	52	1	49	132	18	104	5.67e-13	62.4
MsG0380017565.01.T01	MTR_4g072850	54.098	61	27	1	69	128	27	87	6.64e-13	61.6
MsG0380017565.01.T01	MTR_7g104950	43.548	62	35	0	72	133	53	114	7.58e-13	62.4
MsG0380017565.01.T01	MTR_4g072670	52.459	61	28	1	69	128	21	81	7.91e-13	61.2
MsG0380017565.01.T01	MTR_4g072465	52.459	61	28	1	69	128	21	81	7.99e-13	61.2
MsG0380017565.01.T01	MTR_4g072580	50.820	61	29	1	69	128	20	80	8.11e-13	61.2
MsG0380017565.01.T01	MTR_4g072590	51.724	58	27	1	69	125	20	77	9.74e-13	61.2
MsG0380017565.01.T01	MTR_4g072830	44.872	78	32	2	69	145	23	90	1.08e-12	61.2
MsG0380017565.01.T01	MTR_3g084200	61.364	44	17	0	69	112	25	68	1.35e-12	61.2
MsG0380017565.01.T01	MTR_4g072230	54.098	61	25	2	69	128	26	84	1.88e-12	60.5
MsG0380017565.01.T01	MTR_4g072860	50.746	67	32	1	69	134	26	92	2.57e-12	60.1
MsG0380017565.01.T01	MTR_4g025830	42.105	76	40	2	65	136	75	150	2.89e-12	61.6
MsG0380017565.01.T01	MTR_3g110045	55.172	58	25	1	69	125	84	141	3.08e-12	61.6
MsG0380017565.01.T01	MTR_4g072600	52.459	61	28	1	69	128	20	80	3.40e-12	59.7
MsG0380017565.01.T01	MTR_5g008360	41.975	81	46	1	55	134	2	82	4.01e-12	59.3
MsG0380017565.01.T01	MTR_4g072280	51.667	60	29	0	51	110	8	67	5.70e-12	58.9
MsG0380017565.01.T01	MTR_1g094750	52.459	61	29	0	69	129	50	110	6.32e-12	59.7
MsG0380017565.01.T01	MTR_5g008350	53.846	52	23	1	70	120	21	72	1.01e-11	58.2
MsG0380017565.01.T01	MTR_4g072770	47.059	68	35	1	67	133	13	80	1.13e-11	58.2
MsG0380017565.01.T01	MTR_4g005310	38.824	85	45	2	52	129	40	124	1.29e-11	59.7
MsG0380017565.01.T01	MTR_3g084210	46.269	67	35	1	69	134	25	91	1.70e-11	58.2
MsG0380017565.01.T01	MTR_6g077850	38.554	83	48	2	52	133	19	99	2.04e-11	58.2
MsG0380017565.01.T01	MTR_8g461420	51.724	58	27	1	69	125	25	82	2.04e-11	57.8
MsG0380017565.01.T01	MTR_1g063310	41.975	81	42	2	66	144	23	100	2.07e-11	58.2
MsG0380017565.01.T01	MTR_7g101920	42.105	76	42	1	57	130	23	98	4.05e-11	57.4
MsG0380017565.01.T01	MTR_4g072380	50.000	60	29	1	67	125	19	78	4.48e-11	57.0
MsG0380017565.01.T01	MTR_3g084190	50.000	58	28	1	69	125	25	82	4.50e-11	57.0
MsG0380017565.01.T01	MTR_3g117640	54.237	59	25	2	69	125	34	92	7.67e-11	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380017565.01.T01	AT4G31320	54.167	192	57	5	5	171	4	189	2.44e-57	178
MsG0380017565.01.T01	AT2G24400	54.545	187	53	6	5	171	4	178	2.09e-56	175
MsG0380017565.01.T01	AT3G43120	40.288	139	75	1	10	140	12	150	1.07e-29	107
MsG0380017565.01.T01	AT5G20810	44.697	132	65	3	10	133	12	143	7.34e-28	102
MsG0380017565.01.T01	AT5G20810	44.697	132	65	3	10	133	12	143	7.63e-28	103
MsG0380017565.01.T01	AT1G19840	37.795	127	50	1	6	132	7	104	2.22e-20	82.8
MsG0380017565.01.T01	AT5G10990	36.567	134	56	1	6	139	7	111	1.86e-19	80.5
MsG0380017565.01.T01	AT4G34750	36.220	127	52	2	6	132	3	100	3.74e-19	79.7
MsG0380017565.01.T01	AT4G34750	36.220	127	52	2	6	132	3	100	3.74e-19	79.7
MsG0380017565.01.T01	AT3G12830	33.913	115	72	2	16	130	1	111	2.05e-18	77.0
MsG0380017565.01.T01	AT1G56150	33.913	115	60	1	16	130	1	99	1.16e-17	74.7
MsG0380017565.01.T01	AT1G79130	35.593	118	64	2	16	130	1	109	1.33e-17	75.1
MsG0380017565.01.T01	AT1G75590	37.795	127	51	2	6	132	7	105	1.37e-17	75.5
MsG0380017565.01.T01	AT4G34760	39.326	89	49	1	49	132	18	106	6.85e-17	72.4
MsG0380017565.01.T01	AT4G36110	42.268	97	54	2	37	131	6	102	1.40e-16	71.6
MsG0380017565.01.T01	AT3G20220	40.404	99	57	2	32	129	11	108	2.66e-16	71.2
MsG0380017565.01.T01	AT3G61900	52.239	67	29	1	69	132	30	96	4.14e-16	71.2
MsG0380017565.01.T01	AT1G75580	35.156	128	59	3	5	132	4	107	2.98e-15	68.2
MsG0380017565.01.T01	AT2G21210	48.193	83	35	3	46	125	10	87	4.13e-15	67.8
MsG0380017565.01.T01	AT2G16580	33.333	120	59	2	19	132	3	107	5.53e-15	67.8
MsG0380017565.01.T01	AT5G66260	40.000	85	50	1	49	132	13	97	1.30e-14	66.2
MsG0380017565.01.T01	AT2G21210	42.308	104	48	5	33	125	52	154	1.45e-14	67.8
MsG0380017565.01.T01	AT4G38840	57.627	59	23	2	69	125	33	91	2.26e-14	65.9
MsG0380017565.01.T01	AT2G18010	46.032	63	34	0	69	131	48	110	2.98e-14	65.9
MsG0380017565.01.T01	AT2G21220	40.230	87	49	1	49	132	17	103	4.00e-14	65.1
MsG0380017565.01.T01	AT4G38860	39.806	103	56	3	34	132	4	104	4.91e-14	65.1
MsG0380017565.01.T01	AT2G46690	42.857	70	37	1	69	135	24	93	6.82e-14	65.1
MsG0380017565.01.T01	AT4G34770	46.667	90	41	4	51	134	15	103	7.64e-14	64.7
MsG0380017565.01.T01	AT1G19830	31.967	122	63	2	8	129	7	108	9.00e-14	64.7
MsG0380017565.01.T01	AT3G60690	42.683	82	40	2	67	145	86	163	1.46e-13	65.5
MsG0380017565.01.T01	AT4G00880	47.887	71	35	1	65	133	24	94	1.51e-13	64.3
MsG0380017565.01.T01	AT1G16510	30.833	120	77	2	16	132	1	117	3.98e-13	63.9
MsG0380017565.01.T01	AT4G34800	50.769	65	28	2	69	129	21	85	2.31e-12	60.5
MsG0380017565.01.T01	AT4G12410	42.667	75	40	1	65	136	72	146	4.10e-12	61.2
MsG0380017565.01.T01	AT5G18080	46.875	64	32	2	64	125	19	82	6.85e-12	58.9
MsG0380017565.01.T01	AT4G13790	44.118	68	35	2	68	132	24	91	7.66e-12	58.9
MsG0380017565.01.T01	AT4G38825	44.444	63	33	2	68	128	22	84	8.00e-12	58.9
MsG0380017565.01.T01	AT4G22620	43.056	72	38	1	68	136	78	149	1.54e-11	59.7
MsG0380017565.01.T01	AT3G51200	46.154	65	34	1	69	132	39	103	1.61e-11	58.5
MsG0380017565.01.T01	AT5G53590	41.429	70	36	1	69	133	46	115	2.23e-11	58.9
MsG0380017565.01.T01	AT5G18010	44.737	76	36	3	52	125	11	82	2.26e-11	57.8
MsG0380017565.01.T01	AT5G18030	46.032	63	32	2	65	125	18	80	3.12e-11	57.4
MsG0380017565.01.T01	AT4G34780	51.562	64	27	2	69	128	28	91	4.43e-11	57.4
MsG0380017565.01.T01	AT4G34810	41.975	81	42	2	54	129	33	113	6.50e-11	57.4
MsG0380017565.01.T01	AT2G36210	31.200	125	75	4	11	133	4	119	7.60e-11	57.4
MsG0380017565.01.T01	AT5G18020	46.032	63	32	2	65	125	20	82	9.63e-11	56.2

Find 35 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAGAAGCTGAAGAAGAATT+TGG	0.168030	3:+97939544	MsG0380017565.01.T01:CDS
TGTTATACCAACCGAGTATT+TGG	0.205141	3:+97939495	MsG0380017565.01.T01:CDS
CTACTCTTCTCCATTTCTTA+AGG	0.303486	3:-97939297	None:intergenic
TCTACTCAGAAATGTAGATT+TGG	0.343922	3:+97939655	MsG0380017565.01.T01:CDS
GAGAAGCTGAAGAAGAATTT+GGG	0.377927	3:+97939545	MsG0380017565.01.T01:CDS
TTCAACAGATCCTTAAGAAA+TGG	0.395955	3:+97939287	MsG0380017565.01.T01:CDS
GAATTTGGGTTTGAACAAAC+TGG	0.403966	3:+97939559	MsG0380017565.01.T01:CDS
TGATCCTCCTCCTTCCCGTT+CGG	0.422045	3:-97939413	None:intergenic
TTGGTATAACAAACCTCTTA+AGG	0.430949	3:-97939483	None:intergenic
ATTTGGCATTGAAAAGATGA+TGG	0.461164	3:+97939672	MsG0380017565.01.T01:CDS
GTGTTGGTGTAGACCTTAAG+AGG	0.467583	3:+97939470	MsG0380017565.01.T01:CDS
ATAATAACCAAGTTGGTTTG+AGG	0.468390	3:-97939704	None:intergenic
AACACTTTCAATGTCCGAAC+GGG	0.473602	3:+97939399	MsG0380017565.01.T01:CDS
CTTGAAGATGGTTGAAGGAA+AGG	0.483489	3:+97939624	MsG0380017565.01.T01:CDS
TACTGTTCCTCAAACCAACT+TGG	0.509698	3:+97939697	MsG0380017565.01.T01:CDS
GGCTACCTAGCCGTTTGTGT+TGG	0.517754	3:+97939454	MsG0380017565.01.T01:CDS
GTTGATGATAATAACCAAGT+TGG	0.520248	3:-97939711	None:intergenic
CAAACGGCTAGGTAGCCTTT+CGG	0.521166	3:-97939448	None:intergenic
TATCTGCACATTGGACTATG+AGG	0.522020	3:-97939733	None:intergenic
AGTATCTTGAAGATGGTTGA+AGG	0.527345	3:+97939619	MsG0380017565.01.T01:CDS
AAGGTCTACACCAACACAAA+CGG	0.542797	3:-97939464	None:intergenic
GTTTGAGAGTATCTTGAAGA+TGG	0.543069	3:+97939612	MsG0380017565.01.T01:CDS
TTTGGCATTGAAAAGATGAT+GGG	0.560948	3:+97939673	MsG0380017565.01.T01:CDS
ATGTCCGAACGGGAAGGAGG+AGG	0.563260	3:+97939409	MsG0380017565.01.T01:CDS
TCAAACAACGCGGTTCCGAA+AGG	0.566250	3:+97939433	MsG0380017565.01.T01:CDS
TTCTCTGAGTAATATATGAA+AGG	0.569528	3:-97939527	None:intergenic
TGATGAGCCAAATACTCGGT+TGG	0.591052	3:-97939502	None:intergenic
GGCTTGATGAGCCAAATACT+CGG	0.601541	3:-97939506	None:intergenic
ATGACAAACTATCTGCACAT+TGG	0.610970	3:-97939742	None:intergenic
GAACACTTTCAATGTCCGAA+CGG	0.618386	3:+97939398	MsG0380017565.01.T01:CDS
TCAATGTCCGAACGGGAAGG+AGG	0.628171	3:+97939406	MsG0380017565.01.T01:CDS
CTACACCAACACAAACGGCT+AGG	0.632675	3:-97939459	None:intergenic
CTTTCAATGTCCGAACGGGA+AGG	0.652936	3:+97939403	MsG0380017565.01.T01:CDS
TCAAACACTGAAACTTCACA+AGG	0.665855	3:-97939595	None:intergenic
AGGAGGAGGATCAAACAACG+CGG	0.824181	3:+97939423	MsG0380017565.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	97939241	97939756	97939241	ID=MsG0380017565.01;Name=MsG0380017565.01
Chr3	mRNA	97939241	97939756	97939241	ID=MsG0380017565.01.T01;Parent=MsG0380017565.01;Name=MsG0380017565.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|171
Chr3	exon	97939241	97939756	97939241	ID=MsG0380017565.01.T01:exon:31925;Parent=MsG0380017565.01.T01
Chr3	CDS	97939241	97939756	97939241	ID=MsG0380017565.01.T01:cds;Parent=MsG0380017565.01.T01

Gene Sequence

>MsG0380017565.01.T01

ATGGATCCACCAAAGAAACCTAACAAAATCAGAGAAATTGTTAGACTTCAACAGATCCTTAAGAAATGGAGAAGAGTAGCCAATACTTCAAAAACAAACAGAAGCAGCAGCAACAATAACAACAGTACTACTAGTAAAAGTATAAAGTTTCTTAAAAGAACACTTTCAATGTCCGAACGGGAAGGAGGAGGATCAAACAACGCGGTTCCGAAAGGCTACCTAGCCGTTTGTGTTGGTGTAGACCTTAAGAGGTTTGTTATACCAACCGAGTATTTGGCTCATCAAGCCTTTCATATATTACTCAGAGAAGCTGAAGAAGAATTTGGGTTTGAACAAACTGGTGTTCTGAGAATTCCTTGTGAAGTTTCAGTGTTTGAGAGTATCTTGAAGATGGTTGAAGGAAAGGATAGATTTTCTACTCAGAAATGTAGATTTGGCATTGAAAAGATGATGGGATACTGTTCCTCAAACCAACTTGGTTATTATCATCAACCTCATAGTCCAATGTGCAGATAG

Protein sequence

>MsG0380017565.01.T01

MDPPKKPNKIREIVRLQQILKKWRRVANTSKTNRSSSNNNNSTTSKSIKFLKRTLSMSEREGGGSNNAVPKGYLAVCVGVDLKRFVIPTEYLAHQAFHILLREAEEEFGFEQTGVLRIPCEVSVFESILKMVEGKDRFSTQKCRFGIEKMMGYCSSNQLGYYHQPHSPMCR*