AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047500.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047500.01.T01 MTR_4g128670 96.857 350 10 1 1 349 1 350 0.0 689
MsG0880047500.01.T01 MTR_5g014990 87.313 134 17 0 1 134 1 134 2.89e-84 258
MsG0880047500.01.T01 MTR_1g017140 72.832 173 39 1 1 165 1 173 1.07e-83 257
MsG0880047500.01.T01 MTR_3g103570 68.156 179 49 3 1 173 1 177 2.24e-80 249
MsG0880047500.01.T01 MTR_4g057635 80.645 124 24 0 1 124 1 124 4.63e-73 229
MsG0880047500.01.T01 MTR_4g097570 88.182 110 13 0 1 110 1 110 3.53e-71 224
MsG0880047500.01.T01 MTR_7g102110 79.661 118 24 0 1 118 1 118 2.32e-70 221
MsG0880047500.01.T01 MTR_2g095520 57.477 214 81 3 1 209 1 209 5.54e-70 221
MsG0880047500.01.T01 MTR_1g017000 73.881 134 32 1 1 131 1 134 6.30e-70 219
MsG0880047500.01.T01 MTR_4g097570 87.387 111 13 1 1 110 1 111 2.23e-69 219
MsG0880047500.01.T01 MTR_6g090405 59.524 168 60 1 1 168 1 160 9.34e-66 208
MsG0880047500.01.T01 MTR_6g009430 64.407 118 41 1 1 118 1 117 1.89e-53 179
MsG0880047500.01.T01 MTR_7g010210 62.879 132 46 2 1 132 1 129 1.26e-52 177
MsG0880047500.01.T01 MTR_7g010210 54.268 164 63 4 1 164 1 152 1.52e-52 175
MsG0880047500.01.T01 MTR_7g076740 62.393 117 44 0 1 117 1 117 2.91e-51 172
MsG0880047500.01.T01 MTR_3g461490 63.866 119 42 1 1 119 1 118 1.29e-50 171
MsG0880047500.01.T01 MTR_4g478180 63.559 118 42 1 1 118 2 118 1.69e-50 172
MsG0880047500.01.T01 MTR_0140s0030 48.901 182 77 5 1 179 2 170 8.51e-50 170
MsG0880047500.01.T01 MTR_0489s0020 48.901 182 77 5 1 179 2 170 8.51e-50 170
MsG0880047500.01.T01 MTR_5g029840 49.457 184 81 5 1 175 1 181 1.56e-49 169
MsG0880047500.01.T01 MTR_1g100653 62.393 117 43 1 1 117 1 116 2.38e-49 167
MsG0880047500.01.T01 MTR_7g096930 57.353 136 56 2 1 136 1 134 2.58e-49 167
MsG0880047500.01.T01 MTR_3g074520 61.017 118 45 1 1 118 1 117 3.17e-49 169
MsG0880047500.01.T01 MTR_8g027345 61.538 117 44 1 1 117 1 116 3.26e-49 167
MsG0880047500.01.T01 MTR_6g012690 62.393 117 43 1 1 117 1 116 5.64e-49 168
MsG0880047500.01.T01 MTR_1g076150 64.957 117 40 1 1 117 1 116 6.82e-49 165
MsG0880047500.01.T01 MTR_4g082230 45.411 207 91 4 1 186 1 206 8.74e-49 169
MsG0880047500.01.T01 MTR_7g117730 60.684 117 45 1 1 117 1 116 9.17e-49 164
MsG0880047500.01.T01 MTR_4g073420 49.697 165 63 3 1 163 1 147 1.10e-48 165
MsG0880047500.01.T01 MTR_1g043080 62.712 118 43 1 1 118 1 117 1.82e-48 164
MsG0880047500.01.T01 MTR_4g082290 45.894 207 90 5 1 186 1 206 1.82e-48 168
MsG0880047500.01.T01 MTR_7g011170 62.393 117 43 1 1 117 1 116 1.85e-48 166
MsG0880047500.01.T01 MTR_7g115650 46.328 177 84 4 1 173 1 170 3.01e-48 162
MsG0880047500.01.T01 MTR_2g089620 62.712 118 43 1 1 118 1 117 3.45e-48 165
MsG0880047500.01.T01 MTR_1g043050 51.299 154 72 2 1 152 1 153 5.49e-48 162
MsG0880047500.01.T01 MTR_8g031360 60.504 119 46 1 1 118 1 119 8.13e-48 163
MsG0880047500.01.T01 MTR_3g039990 48.876 178 77 5 1 176 2 167 2.14e-47 163
MsG0880047500.01.T01 MTR_3g097450 58.333 120 49 1 1 120 1 119 7.10e-47 161
MsG0880047500.01.T01 MTR_7g087130 61.538 117 44 1 1 117 1 116 1.21e-46 161
MsG0880047500.01.T01 MTR_6g012180 52.326 172 71 4 1 169 1 164 1.53e-46 160
MsG0880047500.01.T01 MTR_4g091490 60.504 119 45 2 1 118 1 118 1.92e-46 161
MsG0880047500.01.T01 MTR_4g102380 60.169 118 46 1 1 118 1 117 2.64e-46 159
MsG0880047500.01.T01 MTR_2g011660 60.504 119 45 2 1 118 1 118 3.06e-46 160
MsG0880047500.01.T01 MTR_4g125520 52.985 134 62 1 1 134 1 133 1.06e-45 158
MsG0880047500.01.T01 MTR_8g095390 59.167 120 48 1 1 120 1 119 1.48e-45 158
MsG0880047500.01.T01 MTR_5g007370 47.541 183 86 4 1 175 1 181 1.73e-45 157
MsG0880047500.01.T01 MTR_2g034790 58.120 117 48 1 1 117 1 116 2.83e-45 158
MsG0880047500.01.T01 MTR_4g121460 55.200 125 55 1 1 125 1 124 5.66e-45 157
MsG0880047500.01.T01 MTR_4g105130 58.475 118 48 1 1 118 1 117 1.05e-44 157
MsG0880047500.01.T01 MTR_5g078140 58.974 117 47 1 1 117 1 116 1.37e-44 155
MsG0880047500.01.T01 MTR_8g098860 58.120 117 48 1 1 117 1 116 1.55e-44 155
MsG0880047500.01.T01 MTR_5g079670 52.800 125 58 1 3 127 2 125 2.10e-44 152
MsG0880047500.01.T01 MTR_1g085040 58.974 117 47 1 1 117 1 116 2.18e-44 156
MsG0880047500.01.T01 MTR_3g065440 58.974 117 47 1 1 117 1 116 2.53e-44 155
MsG0880047500.01.T01 MTR_1g085640 58.333 120 49 1 1 120 1 119 2.90e-44 157
MsG0880047500.01.T01 MTR_2g067420 59.459 111 44 1 2 112 4 113 5.91e-44 154
MsG0880047500.01.T01 MTR_7g110830 59.167 120 48 1 1 120 1 119 6.22e-44 155
MsG0880047500.01.T01 MTR_2g089450 51.825 137 63 2 1 137 1 134 8.03e-44 152
MsG0880047500.01.T01 MTR_3g083540 56.140 114 49 1 5 118 34 146 1.87e-43 152
MsG0880047500.01.T01 MTR_0251s0050 57.627 118 48 2 1 117 1 117 2.54e-43 151
MsG0880047500.01.T01 MTR_3g077110 56.780 118 50 1 1 118 1 117 2.78e-43 153
MsG0880047500.01.T01 MTR_5g010020 59.459 111 44 1 1 111 1 110 9.25e-43 151
MsG0880047500.01.T01 MTR_0008s0390 56.303 119 50 2 1 118 1 118 1.75e-42 149
MsG0880047500.01.T01 MTR_2g099740 55.000 120 53 1 1 120 1 119 5.34e-42 151
MsG0880047500.01.T01 MTR_0063s0090 58.772 114 46 1 1 114 1 113 5.83e-42 146
MsG0880047500.01.T01 MTR_1g112760 55.172 116 51 1 3 118 4 118 1.18e-41 145
MsG0880047500.01.T01 MTR_2g064160 54.472 123 53 2 6 126 5 126 1.37e-41 147
MsG0880047500.01.T01 MTR_8g017540 55.085 118 52 1 1 118 47 163 1.85e-41 149
MsG0880047500.01.T01 MTR_8g017440 54.701 117 52 1 1 117 1 116 2.08e-41 148
MsG0880047500.01.T01 MTR_7g111290 60.000 110 43 1 1 110 1 109 4.68e-41 148
MsG0880047500.01.T01 MTR_8g017390 52.941 119 56 0 1 119 1 119 4.71e-41 150
MsG0880047500.01.T01 MTR_8g017340 54.622 119 54 0 1 119 1 119 6.97e-41 150
MsG0880047500.01.T01 MTR_0008s0470 53.782 119 53 2 1 118 1 118 1.25e-40 144
MsG0880047500.01.T01 MTR_8g017350 53.782 119 55 0 1 119 1 119 5.37e-40 149
MsG0880047500.01.T01 MTR_8g017500 52.991 117 54 1 1 117 1 116 1.11e-39 143
MsG0880047500.01.T01 MTR_3g052450 57.798 109 45 1 8 116 36 143 2.86e-39 146
MsG0880047500.01.T01 MTR_0008s0280 55.652 115 50 1 1 115 1 114 3.14e-39 139
MsG0880047500.01.T01 MTR_4g485530 50.376 133 62 3 3 134 2 131 3.65e-39 137
MsG0880047500.01.T01 MTR_8g042410 58.095 105 43 1 12 116 37 140 3.49e-38 143
MsG0880047500.01.T01 MTR_2g089420 50.000 122 59 2 1 122 1 120 2.49e-37 139
MsG0880047500.01.T01 MTR_3g052430 56.075 107 46 1 10 116 39 144 4.61e-37 140
MsG0880047500.01.T01 MTR_3g028740 55.046 109 48 1 9 117 19 126 5.95e-37 136
MsG0880047500.01.T01 MTR_3g011610 57.143 105 44 1 12 116 37 140 7.19e-37 139
MsG0880047500.01.T01 MTR_5g079290 55.046 109 48 1 12 120 17 124 1.77e-36 133
MsG0880047500.01.T01 MTR_2g097910 54.717 106 47 1 12 117 20 124 2.16e-36 134
MsG0880047500.01.T01 MTR_1g100667 52.542 118 54 2 1 117 1 117 3.17e-36 132
MsG0880047500.01.T01 MTR_8g020490 54.701 117 48 2 1 117 1 112 3.51e-36 132
MsG0880047500.01.T01 MTR_5g042030 54.206 107 48 1 12 118 7 112 3.85e-36 132
MsG0880047500.01.T01 MTR_7g109320 30.114 352 201 9 1 335 1 324 8.57e-36 133
MsG0880047500.01.T01 MTR_5g079220 51.754 114 54 1 7 120 16 128 1.50e-35 130
MsG0880047500.01.T01 MTR_4g065017 54.717 106 47 1 12 117 17 121 1.54e-35 132
MsG0880047500.01.T01 MTR_5g079120 51.695 118 56 1 8 125 57 173 1.56e-35 131
MsG0880047500.01.T01 MTR_6g006030 52.101 119 54 2 1 117 1 118 1.61e-35 129
MsG0880047500.01.T01 MTR_7g035075 56.075 107 46 1 11 117 13 118 2.10e-35 128
MsG0880047500.01.T01 MTR_1g086530 55.046 109 48 1 8 116 29 136 2.41e-35 130
MsG0880047500.01.T01 MTR_6g055910 53.097 113 52 1 4 116 6 117 6.86e-35 129
MsG0880047500.01.T01 MTR_0197s0010 58.824 102 41 1 16 117 5 105 1.21e-34 127
MsG0880047500.01.T01 MTR_0001s0360 54.128 109 49 1 12 120 7 114 2.66e-34 127
MsG0880047500.01.T01 MTR_4g100720 53.704 108 49 1 9 116 10 116 3.30e-34 124
MsG0880047500.01.T01 MTR_7g017260 53.509 114 50 2 12 123 25 137 3.84e-34 127
MsG0880047500.01.T01 MTR_1g110460 35.242 227 127 6 12 229 26 241 5.53e-34 127
MsG0880047500.01.T01 MTR_1g073170 54.808 104 46 1 13 116 21 123 5.66e-34 126
MsG0880047500.01.T01 MTR_1g045610 55.769 104 45 1 13 116 22 124 5.80e-34 126
MsG0880047500.01.T01 MTR_5g078910 53.271 107 49 1 12 118 7 112 5.90e-34 127
MsG0880047500.01.T01 MTR_5g078950 57.282 103 43 1 12 114 7 108 9.19e-34 125
MsG0880047500.01.T01 MTR_5g088080 53.271 107 48 2 10 115 10 115 2.31e-33 124
MsG0880047500.01.T01 MTR_5g088150 53.271 107 48 2 10 115 10 115 2.31e-33 124
MsG0880047500.01.T01 MTR_5g488210 53.271 107 48 2 10 115 10 115 2.31e-33 124
MsG0880047500.01.T01 MTR_5g088640 53.271 107 48 2 10 115 10 115 2.31e-33 125
MsG0880047500.01.T01 MTR_1g086510 53.704 108 49 1 9 116 18 124 2.45e-33 124
MsG0880047500.01.T01 MTR_8g060940 56.863 102 43 1 12 113 7 107 2.91e-33 124
MsG0880047500.01.T01 MTR_0247s0040 52.381 105 49 1 10 114 5 108 3.29e-33 122
MsG0880047500.01.T01 MTR_5g488170 53.271 107 48 2 10 115 10 115 4.37e-33 123
MsG0880047500.01.T01 MTR_1g062940 53.704 108 49 1 10 117 4 110 4.43e-33 122
MsG0880047500.01.T01 MTR_3g045430 51.695 118 55 2 1 117 1 117 6.75e-33 124
MsG0880047500.01.T01 MTR_2g088170 54.630 108 48 1 9 116 26 132 1.12e-32 127
MsG0880047500.01.T01 MTR_5g062790 52.336 107 49 2 10 115 7 112 1.23e-32 124
MsG0880047500.01.T01 MTR_0193s0090 49.138 116 57 2 10 124 5 119 1.47e-32 120
MsG0880047500.01.T01 MTR_5g078860 51.376 109 52 1 12 120 7 114 3.40e-32 122
MsG0880047500.01.T01 MTR_5g078930 48.000 125 63 2 6 129 2 125 4.01e-32 120
MsG0880047500.01.T01 MTR_1g083630 52.294 109 51 1 8 116 8 115 4.40e-32 127
MsG0880047500.01.T01 MTR_1g021230 51.429 105 50 1 12 116 57 160 8.03e-32 124
MsG0880047500.01.T01 MTR_5g078800 50.459 109 53 1 12 120 7 114 8.43e-32 120
MsG0880047500.01.T01 MTR_2g096380 39.597 149 87 2 12 158 6 153 3.09e-31 118
MsG0880047500.01.T01 MTR_4g123040 54.630 108 48 1 8 115 20 126 2.33e-30 118
MsG0880047500.01.T01 MTR_5g088610 51.402 107 50 2 10 115 7 112 4.47e-30 118
MsG0880047500.01.T01 MTR_2g033170 53.704 108 49 1 8 115 20 126 7.47e-30 117
MsG0880047500.01.T01 MTR_4g063100 45.536 112 60 1 13 124 8 118 2.72e-29 113
MsG0880047500.01.T01 MTR_8g006470 48.624 109 54 2 8 115 6 113 2.00e-28 112
MsG0880047500.01.T01 MTR_4g019370 48.214 112 56 2 14 125 38 147 2.83e-27 110
MsG0880047500.01.T01 MTR_5g016510 50.485 103 49 2 14 116 5 105 4.08e-27 109
MsG0880047500.01.T01 MTR_4g094982 50.485 103 49 2 14 116 5 105 1.16e-26 107
MsG0880047500.01.T01 MTR_7g111290 69.231 65 20 0 46 110 3 67 2.81e-26 107
MsG0880047500.01.T01 MTR_4g029540 45.872 109 57 2 8 115 6 113 8.18e-26 105
MsG0880047500.01.T01 MTR_4g128190 47.619 105 40 2 12 115 11 101 9.04e-26 103
MsG0880047500.01.T01 MTR_2g096380 41.379 116 66 1 45 158 19 134 3.63e-25 101
MsG0880047500.01.T01 MTR_3g101290 47.573 103 52 2 14 116 37 137 4.37e-25 101
MsG0880047500.01.T01 MTR_6g055910 60.563 71 28 0 46 116 18 88 8.83e-25 101
MsG0880047500.01.T01 MTR_4g063100 52.500 80 38 0 45 124 10 89 9.87e-25 100
MsG0880047500.01.T01 MTR_1g085880 50.000 106 50 3 12 115 11 115 1.53e-24 99.4
MsG0880047500.01.T01 MTR_6g015455 49.515 103 50 2 14 116 5 105 2.34e-24 105
MsG0880047500.01.T01 MTR_1g085770 50.000 106 50 3 12 115 11 115 1.27e-23 99.4
MsG0880047500.01.T01 MTR_5g007300 49.438 89 44 1 1 89 53 140 2.42e-23 94.4
MsG0880047500.01.T01 MTR_6g074860 27.897 233 146 7 14 246 4 214 4.45e-23 96.7
MsG0880047500.01.T01 MTR_5g070020 39.535 129 75 3 14 142 122 247 5.97e-22 95.5
MsG0880047500.01.T01 MTR_5g082910 48.000 100 50 2 14 113 19 116 1.07e-21 94.0
MsG0880047500.01.T01 MTR_5g049190 44.554 101 54 2 9 109 14 112 1.85e-21 92.0
MsG0880047500.01.T01 MTR_4g105660 43.363 113 61 3 9 121 175 284 3.31e-21 94.4
MsG0880047500.01.T01 MTR_3g077650 42.982 114 62 3 9 122 176 286 1.09e-20 93.2
MsG0880047500.01.T01 MTR_5g041570 41.071 112 61 3 14 125 134 240 1.44e-20 92.4
MsG0880047500.01.T01 MTR_1g057980 39.831 118 67 2 11 128 77 190 3.92e-20 89.7
MsG0880047500.01.T01 MTR_3g089045 37.342 158 82 5 8 150 10 165 4.48e-20 89.4
MsG0880047500.01.T01 MTR_3g463400 38.462 130 74 4 1 126 119 246 1.01e-19 90.1
MsG0880047500.01.T01 MTR_6g027340 39.815 108 60 3 14 118 16 121 1.09e-19 86.3
MsG0880047500.01.T01 MTR_7g061550 36.957 138 76 4 17 152 10 138 1.18e-19 89.4
MsG0880047500.01.T01 MTR_7g061330 42.748 131 62 4 14 136 113 238 4.67e-19 88.6
MsG0880047500.01.T01 MTR_7g461410 42.748 131 62 4 14 136 113 238 4.67e-19 88.6
MsG0880047500.01.T01 MTR_7g035350 38.333 120 70 3 11 130 222 337 5.34e-19 88.2
MsG0880047500.01.T01 MTR_3g110028 43.269 104 57 2 14 117 85 186 6.18e-19 88.6
MsG0880047500.01.T01 MTR_7g061330 42.748 131 62 4 14 136 77 202 7.01e-19 88.2
MsG0880047500.01.T01 MTR_7g037260 38.261 115 69 2 11 125 142 254 9.10e-19 86.7
MsG0880047500.01.T01 MTR_4g082040 39.806 103 60 2 14 116 105 205 1.04e-18 87.0
MsG0880047500.01.T01 MTR_7g451170 43.119 109 59 3 14 122 191 296 1.09e-18 87.0
MsG0880047500.01.T01 MTR_6g027360 37.500 112 65 3 10 118 74 183 4.50e-18 84.0
MsG0880047500.01.T01 MTR_6g027370 40.777 103 59 2 14 116 99 199 5.53e-18 84.3
MsG0880047500.01.T01 MTR_7g450950 36.975 119 72 3 10 128 153 268 1.77e-17 82.8
MsG0880047500.01.T01 MTR_4g088015 40.517 116 66 3 11 126 218 330 1.92e-17 83.6
MsG0880047500.01.T01 MTR_1g026870 41.346 104 59 2 14 117 85 186 3.24e-17 83.6
MsG0880047500.01.T01 MTR_5g010650 44.000 100 54 2 11 110 107 204 5.93e-17 82.0
MsG0880047500.01.T01 MTR_7g086960 41.748 103 58 2 14 116 89 189 1.45e-16 80.1
MsG0880047500.01.T01 MTR_0023s0210 49.315 73 36 1 10 82 5 76 5.31e-16 72.8
MsG0880047500.01.T01 MTR_7g037130 37.931 116 69 3 11 126 142 254 5.53e-16 78.6
MsG0880047500.01.T01 MTR_5g038910 40.000 100 58 2 17 116 29 126 1.04e-15 77.8
MsG0880047500.01.T01 MTR_5g038910 39.000 100 59 2 17 116 29 126 1.40e-15 77.8
MsG0880047500.01.T01 MTR_8g468380 41.000 100 57 2 17 116 25 122 2.18e-15 77.4
MsG0880047500.01.T01 MTR_2g096380 34.444 90 57 1 71 158 1 90 2.29e-11 62.4
MsG0880047500.01.T01 MTR_8g017480 52.830 53 24 1 1 53 1 52 3.29e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047500.01.T01 AT5G57620 64.315 241 73 4 1 239 1 230 4.50e-100 299
MsG0880047500.01.T01 AT3G49690 90.244 123 12 0 1 123 1 123 1.15e-81 251
MsG0880047500.01.T01 AT5G65790 89.431 123 13 0 1 123 1 123 2.60e-80 250
MsG0880047500.01.T01 AT4G37780 85.950 121 17 0 1 121 1 121 3.01e-76 237
MsG0880047500.01.T01 AT2G36890 84.034 119 19 0 1 119 1 119 8.43e-72 225
MsG0880047500.01.T01 AT2G36890 84.034 119 19 0 1 119 42 160 1.16e-71 226
MsG0880047500.01.T01 AT5G23000 78.814 118 25 0 1 118 1 118 1.27e-66 213
MsG0880047500.01.T01 AT5G56110 65.546 119 40 1 1 119 1 118 8.65e-53 177
MsG0880047500.01.T01 AT2G31180 58.042 143 53 2 1 143 1 136 1.05e-51 172
MsG0880047500.01.T01 AT3G01140 64.407 118 41 1 1 118 1 117 2.36e-51 174
MsG0880047500.01.T01 AT3G47600 50.000 192 87 5 1 184 1 191 7.08e-51 172
MsG0880047500.01.T01 AT5G15310 62.712 118 43 1 1 118 1 117 2.77e-50 168
MsG0880047500.01.T01 AT3G61250 62.712 118 43 1 1 118 1 117 4.39e-50 169
MsG0880047500.01.T01 AT3G23250 63.248 117 42 1 1 117 1 116 5.02e-50 169
MsG0880047500.01.T01 AT5G15310 62.712 118 43 1 1 118 1 117 8.62e-50 169
MsG0880047500.01.T01 AT5G15310 62.712 118 43 1 1 118 1 117 1.15e-49 169
MsG0880047500.01.T01 AT1G22640 57.143 133 55 2 1 133 1 131 3.15e-49 166
MsG0880047500.01.T01 AT5G62470 50.610 164 72 3 1 164 1 155 3.57e-49 169
MsG0880047500.01.T01 AT3G02940 61.017 118 45 1 1 118 1 117 3.99e-49 167
MsG0880047500.01.T01 AT5G16770 62.712 118 43 1 1 118 1 117 5.87e-49 167
MsG0880047500.01.T01 AT5G16770 62.712 118 43 1 1 118 1 117 5.87e-49 167
MsG0880047500.01.T01 AT1G74650 56.643 143 57 2 1 143 1 138 5.92e-49 167
MsG0880047500.01.T01 AT3G02940 61.017 118 45 1 1 118 1 117 8.45e-49 167
MsG0880047500.01.T01 AT3G02940 61.017 118 45 1 1 118 1 117 8.45e-49 167
MsG0880047500.01.T01 AT3G62610 56.818 132 56 1 1 132 1 131 9.10e-49 167
MsG0880047500.01.T01 AT5G16770 62.712 118 43 1 1 118 1 117 1.30e-48 167
MsG0880047500.01.T01 AT5G16770 62.712 118 43 1 1 118 1 117 1.30e-48 167
MsG0880047500.01.T01 AT2G16720 60.000 120 47 1 1 120 1 119 1.69e-48 164
MsG0880047500.01.T01 AT4G28110 61.017 118 45 1 1 118 1 117 3.61e-48 164
MsG0880047500.01.T01 AT4G21440 48.276 174 83 3 1 168 1 173 4.23e-48 166
MsG0880047500.01.T01 AT3G01140 63.478 115 41 1 4 118 47 160 4.26e-48 167
MsG0880047500.01.T01 AT1G16490 52.667 150 67 2 2 151 4 149 4.60e-48 163
MsG0880047500.01.T01 AT1G79180 62.931 116 42 1 2 117 4 118 5.03e-48 164
MsG0880047500.01.T01 AT4G05100 62.185 119 43 2 1 118 1 118 5.14e-48 165
MsG0880047500.01.T01 AT1G35515 52.555 137 64 1 1 137 1 136 6.24e-48 161
MsG0880047500.01.T01 AT3G28910 64.103 117 41 1 1 117 1 116 8.34e-48 164
MsG0880047500.01.T01 AT1G06180 60.800 125 48 1 1 125 1 124 8.62e-48 162
MsG0880047500.01.T01 AT4G38620 59.322 118 47 1 1 118 1 117 9.62e-48 163
MsG0880047500.01.T01 AT4G09460 60.169 118 46 1 1 118 1 117 1.19e-47 161
MsG0880047500.01.T01 AT1G08810 62.393 117 43 1 1 117 1 116 1.46e-47 162
MsG0880047500.01.T01 AT4G34990 60.000 120 47 1 1 120 1 119 3.75e-47 161
MsG0880047500.01.T01 AT5G62470 50.610 164 71 4 1 164 1 154 4.11e-47 163
MsG0880047500.01.T01 AT4G17785 61.345 119 44 2 1 118 1 118 1.04e-46 162
MsG0880047500.01.T01 AT5G49330 50.000 152 68 2 1 152 1 144 1.27e-46 162
MsG0880047500.01.T01 AT4G17785 61.345 119 44 2 1 118 1 118 1.59e-46 162
MsG0880047500.01.T01 AT1G56160 59.483 116 46 1 2 117 4 118 1.79e-46 160
MsG0880047500.01.T01 AT3G28470 61.261 111 42 1 1 111 1 110 1.92e-46 160
MsG0880047500.01.T01 AT5G61420 61.017 118 45 1 1 118 1 117 2.58e-46 161
MsG0880047500.01.T01 AT4G12350 61.017 118 45 1 1 118 1 117 2.86e-46 159
MsG0880047500.01.T01 AT5G07690 60.833 120 46 1 1 120 1 119 3.33e-46 160
MsG0880047500.01.T01 AT1G34670 60.169 118 46 1 1 118 1 117 5.11e-46 160
MsG0880047500.01.T01 AT5G65230 59.322 118 47 1 1 118 1 117 9.52e-46 158
MsG0880047500.01.T01 AT5G60890 59.829 117 46 1 1 117 1 116 1.21e-45 158
MsG0880047500.01.T01 AT2G47460 58.120 117 48 1 1 117 1 116 1.49e-45 159
MsG0880047500.01.T01 AT4G22680 59.322 118 47 1 1 118 1 117 1.70e-45 156
MsG0880047500.01.T01 AT3G13540 58.261 115 47 1 4 118 15 128 1.82e-45 156
MsG0880047500.01.T01 AT4G01680 59.829 117 46 1 1 117 1 116 3.26e-45 155
MsG0880047500.01.T01 AT1G57560 51.333 150 69 2 1 150 1 146 3.42e-45 156
MsG0880047500.01.T01 AT3G12820 59.322 118 47 1 3 120 5 121 5.78e-45 154
MsG0880047500.01.T01 AT5G10280 57.627 118 49 1 1 118 1 117 5.79e-45 157
MsG0880047500.01.T01 AT1G18570 61.157 121 45 2 1 120 1 120 6.44e-45 157
MsG0880047500.01.T01 AT4G01680 59.829 117 46 1 1 117 1 116 1.02e-44 156
MsG0880047500.01.T01 AT1G63910 58.120 117 48 1 1 117 1 116 2.60e-44 156
MsG0880047500.01.T01 AT5G26660 56.667 120 51 1 1 120 1 119 2.93e-44 155
MsG0880047500.01.T01 AT5G16600 59.829 117 46 1 1 117 1 116 4.83e-44 154
MsG0880047500.01.T01 AT1G57560 50.667 150 73 1 1 150 1 149 5.85e-44 154
MsG0880047500.01.T01 AT5G62320 50.360 139 63 1 2 134 3 141 1.08e-43 151
MsG0880047500.01.T01 AT5G54230 59.322 118 47 1 1 118 1 117 1.80e-43 153
MsG0880047500.01.T01 AT1G66230 58.120 117 48 1 1 117 1 116 2.10e-43 151
MsG0880047500.01.T01 AT5G14340 52.143 140 63 3 1 137 13 151 2.40e-43 151
MsG0880047500.01.T01 AT5G07700 57.627 118 49 1 1 118 1 117 5.09e-43 152
MsG0880047500.01.T01 AT5G07700 57.627 118 49 1 1 118 1 117 5.09e-43 152
MsG0880047500.01.T01 AT1G09540 58.120 117 48 1 1 117 1 116 6.54e-43 152
MsG0880047500.01.T01 AT3G13890 54.237 118 53 1 1 118 1 117 7.69e-42 149
MsG0880047500.01.T01 AT1G74080 55.000 120 53 1 1 120 1 119 1.10e-41 148
MsG0880047500.01.T01 AT4G01680 54.264 129 46 2 1 117 1 128 1.40e-41 149
MsG0880047500.01.T01 AT3G12720 50.388 129 63 1 6 134 16 143 1.97e-41 147
MsG0880047500.01.T01 AT1G79180 48.993 149 42 2 2 117 4 151 2.35e-41 147
MsG0880047500.01.T01 AT5G14750 55.172 116 51 1 13 128 17 131 1.70e-40 141
MsG0880047500.01.T01 AT3G27920 41.885 191 99 3 13 203 15 193 2.36e-40 142
MsG0880047500.01.T01 AT5G52600 57.018 114 48 1 9 122 9 121 8.07e-40 140
MsG0880047500.01.T01 AT3G13890 50.394 127 53 2 1 118 1 126 8.62e-39 142
MsG0880047500.01.T01 AT5G40330 57.143 105 44 1 13 117 13 116 1.58e-38 137
MsG0880047500.01.T01 AT1G74430 54.167 120 54 1 1 120 1 119 3.66e-38 137
MsG0880047500.01.T01 AT5G55020 58.491 106 43 1 12 117 26 130 4.94e-38 142
MsG0880047500.01.T01 AT2G32460 57.143 105 44 1 12 116 6 109 3.12e-37 139
MsG0880047500.01.T01 AT2G32460 57.143 105 44 1 12 116 18 121 3.59e-37 140
MsG0880047500.01.T01 AT4G26930 57.692 104 43 1 12 115 19 121 4.74e-37 137
MsG0880047500.01.T01 AT5G12870 55.660 106 46 1 12 117 18 122 7.07e-37 134
MsG0880047500.01.T01 AT5G06100 55.046 109 48 1 8 116 28 135 2.53e-36 137
MsG0880047500.01.T01 AT1G18710 51.282 117 56 1 1 117 1 116 4.29e-36 132
MsG0880047500.01.T01 AT3G27810 55.963 109 47 1 9 117 17 124 4.37e-36 130
MsG0880047500.01.T01 AT5G35550 53.211 109 50 1 9 117 11 118 6.13e-36 131
MsG0880047500.01.T01 AT5G06100 55.046 109 48 1 8 116 28 135 6.38e-36 137
MsG0880047500.01.T01 AT5G06100 55.046 109 48 1 8 116 28 135 6.38e-36 137
MsG0880047500.01.T01 AT5G06100 55.046 109 48 1 8 116 28 135 6.38e-36 137
MsG0880047500.01.T01 AT5G06100 55.046 109 48 1 8 116 28 135 6.38e-36 137
MsG0880047500.01.T01 AT3G01530 51.818 110 52 1 8 117 21 129 8.77e-36 129
MsG0880047500.01.T01 AT3G08500 55.046 109 48 1 9 117 27 134 1.10e-35 133
MsG0880047500.01.T01 AT1G25340 46.405 153 75 2 10 156 16 167 1.55e-35 131
MsG0880047500.01.T01 AT3G11440 50.926 108 52 1 9 116 38 144 2.71e-35 134
MsG0880047500.01.T01 AT5G40350 54.128 109 49 1 10 118 15 122 3.51e-35 128
MsG0880047500.01.T01 AT3G11440 50.926 108 52 1 9 116 38 144 1.20e-34 134
MsG0880047500.01.T01 AT3G11440 50.926 108 52 1 9 116 38 144 1.20e-34 134
MsG0880047500.01.T01 AT3G11440 50.926 108 52 1 9 116 38 144 1.20e-34 134
MsG0880047500.01.T01 AT5G52260 54.783 115 51 1 9 123 9 122 5.35e-34 126
MsG0880047500.01.T01 AT3G48920 49.167 120 60 1 9 128 15 133 8.48e-34 125
MsG0880047500.01.T01 AT2G47190 50.000 120 59 1 8 127 16 134 9.82e-34 126
MsG0880047500.01.T01 AT2G26960 43.243 148 81 3 9 154 17 163 1.58e-33 129
MsG0880047500.01.T01 AT4G13480 53.913 115 48 2 13 127 7 116 2.26e-33 124
MsG0880047500.01.T01 AT4G25560 54.717 106 47 1 13 118 11 115 2.53e-33 125
MsG0880047500.01.T01 AT1G48000 55.963 109 45 2 12 118 32 139 2.54e-33 124
MsG0880047500.01.T01 AT3G24310 55.769 104 45 1 13 116 19 121 5.32e-33 124
MsG0880047500.01.T01 AT1G66370 50.000 116 53 2 1 116 1 111 6.12e-33 123
MsG0880047500.01.T01 AT1G68320 54.286 105 47 1 12 116 19 122 2.89e-32 122
MsG0880047500.01.T01 AT3G06490 56.481 108 46 1 8 115 15 121 9.91e-32 122
MsG0880047500.01.T01 AT3G30210 48.739 119 60 1 12 130 27 144 2.34e-31 119
MsG0880047500.01.T01 AT1G66380 53.333 105 48 1 12 116 8 111 5.56e-31 114
MsG0880047500.01.T01 AT1G25340 44.444 153 73 3 10 156 16 162 6.74e-31 118
MsG0880047500.01.T01 AT1G25340 44.444 153 73 3 10 156 16 162 1.09e-30 119
MsG0880047500.01.T01 AT5G14750 56.667 90 36 1 39 128 11 97 1.23e-30 114
MsG0880047500.01.T01 AT5G26660 58.537 82 34 0 39 120 7 88 3.26e-30 117
MsG0880047500.01.T01 AT1G66390 52.381 105 49 1 12 116 8 111 8.52e-30 115
MsG0880047500.01.T01 AT5G49620 49.612 129 60 2 8 136 22 145 1.48e-29 115
MsG0880047500.01.T01 AT1G56650 52.381 105 49 1 12 116 8 111 1.61e-29 114
MsG0880047500.01.T01 AT5G59780 46.364 110 58 1 13 122 9 117 5.30e-29 112
MsG0880047500.01.T01 AT3G46130 46.364 110 58 1 13 122 10 118 5.69e-29 113
MsG0880047500.01.T01 AT3G47600 46.622 148 71 4 45 184 38 185 8.29e-29 114
MsG0880047500.01.T01 AT3G53200 51.429 105 50 1 12 116 9 112 2.32e-28 110
MsG0880047500.01.T01 AT2G26950 43.750 112 61 2 9 120 13 122 2.48e-27 111
MsG0880047500.01.T01 AT3G27810 63.014 73 27 0 45 117 3 75 5.00e-27 105
MsG0880047500.01.T01 AT1G18960 46.154 104 52 2 14 117 10 109 6.83e-27 108
MsG0880047500.01.T01 AT5G35550 59.494 79 32 0 39 117 43 121 1.07e-26 107
MsG0880047500.01.T01 AT3G60460 46.296 108 56 2 9 115 8 114 1.75e-26 107
MsG0880047500.01.T01 AT2G23290 51.456 103 48 2 14 116 13 113 3.08e-26 106
MsG0880047500.01.T01 AT3G12820 61.111 72 28 0 49 120 2 73 3.09e-26 103
MsG0880047500.01.T01 AT5G49620 44.755 143 60 3 8 136 22 159 4.36e-26 106
MsG0880047500.01.T01 AT5G40350 59.459 74 30 0 45 118 4 77 5.76e-26 102
MsG0880047500.01.T01 AT3G53200 60.274 73 29 0 44 116 7 79 9.26e-25 100
MsG0880047500.01.T01 AT3G27785 47.222 108 55 2 9 116 184 289 1.10e-24 104
MsG0880047500.01.T01 AT5G67300 46.364 110 57 2 10 119 2 109 1.17e-24 102
MsG0880047500.01.T01 AT5G59780 54.430 79 36 0 44 122 18 96 1.36e-24 100
MsG0880047500.01.T01 AT3G50060 47.273 110 56 2 10 119 2 109 1.90e-24 101
MsG0880047500.01.T01 AT3G46130 54.430 79 36 0 44 122 18 96 2.22e-24 100
MsG0880047500.01.T01 AT4G37260 47.573 103 52 2 14 116 13 113 3.07e-24 101
MsG0880047500.01.T01 AT1G66380 61.111 72 28 0 45 116 7 78 6.09e-24 95.1
MsG0880047500.01.T01 AT5G40360 33.333 189 100 5 12 181 156 337 8.89e-24 100
MsG0880047500.01.T01 AT3G46130 54.545 77 35 0 46 122 10 86 9.42e-24 98.2
MsG0880047500.01.T01 AT3G09230 38.298 141 79 3 14 154 55 187 1.23e-23 100
MsG0880047500.01.T01 AT2G39880 47.573 103 52 2 14 116 50 150 5.45e-23 99.0
MsG0880047500.01.T01 AT3G55730 48.544 103 51 2 14 116 56 156 7.44e-23 99.0
MsG0880047500.01.T01 AT1G69560 31.050 219 104 7 9 219 102 281 1.30e-22 97.1
MsG0880047500.01.T01 AT1G69560 42.202 109 61 2 9 117 118 224 2.08e-22 97.1
MsG0880047500.01.T01 AT5G58850 39.683 126 73 3 11 136 102 224 2.27e-22 97.8
MsG0880047500.01.T01 AT1G17950 44.660 103 55 2 14 116 5 105 2.87e-22 94.7
MsG0880047500.01.T01 AT4G18770 42.982 114 62 3 9 122 212 322 3.11e-22 97.4
MsG0880047500.01.T01 AT2G25230 43.220 118 64 3 9 126 21 135 3.49e-22 94.0
MsG0880047500.01.T01 AT1G22640 56.000 75 32 1 59 133 1 74 9.57e-22 92.0
MsG0880047500.01.T01 AT1G26780 38.525 122 68 3 14 130 98 217 1.41e-20 90.5
MsG0880047500.01.T01 AT5G14750 54.286 70 32 0 59 128 1 70 2.32e-20 86.7
MsG0880047500.01.T01 AT5G14750 54.286 70 32 0 59 128 1 70 2.32e-20 86.7
MsG0880047500.01.T01 AT1G26780 38.525 122 68 3 14 130 98 217 2.68e-20 91.3
MsG0880047500.01.T01 AT5G17800 39.091 110 65 2 14 123 93 200 4.99e-20 89.7
MsG0880047500.01.T01 AT4G33450 33.714 175 96 6 9 182 14 169 7.24e-20 88.2
MsG0880047500.01.T01 AT5G11050 34.395 157 90 4 11 167 102 245 8.86e-20 90.1
MsG0880047500.01.T01 AT3G23250 62.712 59 22 0 59 117 1 59 1.43e-19 86.7
MsG0880047500.01.T01 AT1G73410 45.631 103 54 2 14 116 6 106 1.68e-19 86.7
MsG0880047500.01.T01 AT3G09370 44.660 103 55 2 14 116 135 235 1.80e-19 89.7
MsG0880047500.01.T01 AT3G09370 28.492 179 113 4 14 179 83 259 3.80e-12 67.8
MsG0880047500.01.T01 AT3G09370 44.660 103 55 2 14 116 130 230 2.24e-19 89.4
MsG0880047500.01.T01 AT3G09370 28.492 179 113 4 14 179 78 254 4.64e-12 67.4
MsG0880047500.01.T01 AT3G09370 44.660 103 55 2 14 116 143 243 2.60e-19 89.4
MsG0880047500.01.T01 AT3G09370 28.492 179 113 4 14 179 91 267 3.71e-12 67.8
MsG0880047500.01.T01 AT1G73410 45.631 103 54 2 14 116 6 106 4.15e-19 84.7
MsG0880047500.01.T01 AT1G71030 50.746 67 33 0 52 118 5 71 4.36e-19 84.3
MsG0880047500.01.T01 AT1G71030 50.746 67 33 0 52 118 19 85 4.87e-19 84.3
MsG0880047500.01.T01 AT5G02320 42.308 104 58 2 14 117 67 168 1.51e-18 87.0
MsG0880047500.01.T01 AT5G02320 29.070 172 107 4 14 172 15 184 3.81e-13 70.9
MsG0880047500.01.T01 AT5G02320 42.308 104 58 2 14 117 127 228 1.52e-18 87.0
MsG0880047500.01.T01 AT5G02320 29.070 172 107 4 14 172 75 244 4.06e-13 70.9
MsG0880047500.01.T01 AT5G02320 42.308 104 58 2 14 117 127 228 1.52e-18 87.0
MsG0880047500.01.T01 AT5G02320 29.070 172 107 4 14 172 75 244 4.06e-13 70.9
MsG0880047500.01.T01 AT2G37630 36.232 138 76 4 17 152 7 134 4.59e-18 84.7
MsG0880047500.01.T01 AT4G32730 42.308 104 58 2 14 117 87 188 4.86e-18 85.9
MsG0880047500.01.T01 AT4G32730 42.308 104 58 2 14 117 87 188 5.50e-18 85.9
MsG0880047500.01.T01 AT4G32730 42.308 104 58 2 14 117 87 188 5.50e-18 85.9
MsG0880047500.01.T01 AT4G32730 42.308 104 58 2 14 117 87 188 5.50e-18 85.9
MsG0880047500.01.T01 AT4G32730 42.308 104 58 2 14 117 87 188 5.50e-18 85.9
MsG0880047500.01.T01 AT2G02820 42.000 100 56 2 17 116 33 130 8.02e-18 83.6
MsG0880047500.01.T01 AT5G40430 36.000 125 74 4 9 131 49 169 1.16e-17 82.0
MsG0880047500.01.T01 AT2G02820 42.000 100 56 2 17 116 33 130 1.57e-17 84.0
MsG0880047500.01.T01 AT2G02820 42.000 100 56 2 17 116 33 130 2.23e-17 83.6
MsG0880047500.01.T01 AT5G11510 40.385 104 60 2 14 117 81 182 3.23e-17 83.6
MsG0880047500.01.T01 AT5G11510 40.385 104 60 2 14 117 81 182 3.37e-17 83.6
MsG0880047500.01.T01 AT5G11510 40.385 104 60 2 14 117 81 182 3.37e-17 83.6
MsG0880047500.01.T01 AT5G11510 40.385 104 60 2 14 117 81 182 3.37e-17 83.6
MsG0880047500.01.T01 AT5G11510 40.385 104 60 2 14 117 81 182 3.49e-17 83.2
MsG0880047500.01.T01 AT1G14350 36.585 123 76 2 17 139 28 148 1.13e-16 81.3
MsG0880047500.01.T01 AT1G14350 36.585 123 76 2 17 139 28 148 1.13e-16 81.3
MsG0880047500.01.T01 AT3G29020 35.577 104 65 2 14 117 65 166 1.39e-16 78.6
MsG0880047500.01.T01 AT3G29020 30.151 199 110 8 14 187 67 261 1.68e-16 79.3
MsG0880047500.01.T01 AT1G66380 43.902 82 45 1 12 93 8 88 2.75e-16 74.3
MsG0880047500.01.T01 AT4G00540 35.417 144 70 4 11 136 100 238 1.75e-15 77.4
MsG0880047500.01.T01 AT4G00540 35.417 144 70 4 11 136 98 236 2.42e-15 77.0
MsG0880047500.01.T01 AT5G39700 34.483 116 71 3 9 124 51 161 4.41e-13 67.4
MsG0880047500.01.T01 AT1G74650 51.667 60 25 1 78 137 1 56 9.35e-11 62.0
MsG0880047500.01.T01 AT5G59780 48.077 52 27 0 71 122 1 52 9.96e-11 60.5

Find 60 sgRNAs with CRISPR-Local

Find 85 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACCACAGGTTGATCTTT+TGG 0.226254 8:+87205264 MsG0880047500.01.T01:CDS
AATCCACCATGTTTGATATT+AGG 0.227994 8:-87204689 None:intergenic
TCAGTTACCTTCAATGCTTC+TGG 0.240988 8:+87205319 MsG0880047500.01.T01:CDS
GAGAAAGCACTTTGCATCAT+AGG 0.280556 8:-87205241 None:intergenic
ATGTCATTGTCTGTTCTTCC+AGG 0.285868 8:-87204926 None:intergenic
TTTGGAGACTATTATTCCTT+TGG 0.323714 8:+87205282 MsG0880047500.01.T01:CDS
CAAATGGAACTGGAGGAAAT+TGG 0.340815 8:+87204303 MsG0880047500.01.T01:CDS
TTCTCAACAGCTTCTCCTCT+TGG 0.342126 8:-87205388 None:intergenic
CAAAGGATCAAAACTTGATA+TGG 0.348542 8:+87205548 MsG0880047500.01.T01:CDS
AGGTAACTGAGCAGCAATAA+TGG 0.351596 8:-87204906 None:intergenic
TTGAGTGTAGCATCTTCTTC+AGG 0.353099 8:-87204266 None:intergenic
TACTAACAATGAAGGAATTC+AGG 0.353154 8:+87205414 MsG0880047500.01.T01:CDS
CAAGATTATGAACTAGGTTA+TGG 0.365764 8:+87205655 MsG0880047500.01.T01:CDS
TACATTGAAACAAATGGAAC+TGG 0.413107 8:+87204293 MsG0880047500.01.T01:CDS
GCTATTTCCAGAAGCATTGA+AGG 0.415074 8:-87205326 None:intergenic
TCTTGAGAAGGATGCAACTT+TGG 0.415428 8:-87205178 None:intergenic
AAATCCTACATTGAAACAAA+TGG 0.425709 8:+87204287 MsG0880047500.01.T01:CDS
CATAACCTAGTTCATAATCT+TGG 0.426322 8:-87205654 None:intergenic
TGATGAATCCCATGAGTTTG+AGG 0.428809 8:-87205605 None:intergenic
ATATGGTGGTCAAATGATTC+AGG 0.431167 8:+87205565 MsG0880047500.01.T01:CDS
ATAACCCTGCTGCACTACTT+TGG 0.432914 8:+87205155 MsG0880047500.01.T01:CDS
ATTATTGCTGCTCAGTTACC+TGG 0.434957 8:+87204908 MsG0880047500.01.T01:CDS
AGTTCCATTTGTTTCAATGT+AGG 0.437388 8:-87204291 None:intergenic
GATTCAGGTGATACTAAATC+AGG 0.438934 8:+87205580 MsG0880047500.01.T01:CDS
ATGAATCAAAAGGACACAAA+TGG 0.442409 8:+87205025 MsG0880047500.01.T01:CDS
CAATGAAGGAATTCAGGAAC+TGG 0.460259 8:+87205420 MsG0880047500.01.T01:CDS
ATGTTCCAAGATTATGAACT+AGG 0.478325 8:+87205649 MsG0880047500.01.T01:CDS
TTTGGCCAAAGTAGTGCAGC+AGG 0.478344 8:-87205160 None:intergenic
AATCAGGATCCTCAAACTCA+TGG 0.482426 8:+87205596 MsG0880047500.01.T01:CDS
CAACAACTTGATGAATCAAA+AGG 0.482715 8:+87205015 MsG0880047500.01.T01:CDS
AAGTGCTTTCTCTTCACCAC+AGG 0.493710 8:+87205252 MsG0880047500.01.T01:CDS
TGCAGCCTTTACATAAGCAT+TGG 0.498062 8:+87204737 MsG0880047500.01.T01:CDS
TTTACATAAGCATTGGAAGC+AGG 0.498797 8:+87204744 MsG0880047500.01.T01:CDS
TCAACTAATCTTATGCAAGA+AGG 0.503672 8:+87205625 MsG0880047500.01.T01:CDS
AGATTGAAGAAGAAATTACT+TGG 0.505847 8:+87204968 MsG0880047500.01.T01:CDS
CAACTAATCTTATGCAAGAA+GGG 0.511092 8:+87205626 MsG0880047500.01.T01:CDS
AGAAAGCACTTTGCATCATA+GGG 0.517317 8:-87205240 None:intergenic
TGCTTCCAATGCTTATGTAA+AGG 0.518624 8:-87204742 None:intergenic
TATGAATAACAATGGTTCAA+AGG 0.518828 8:+87205531 MsG0880047500.01.T01:CDS
GTGGAAAGAGTTGCAGACTT+AGG 0.527362 8:+87204648 MsG0880047500.01.T01:CDS
GAGAAGAGTACTAACAATGA+AGG 0.532789 8:+87205406 MsG0880047500.01.T01:CDS
GAAGTATTGTTATTCTCCAA+AGG 0.545661 8:-87205298 None:intergenic
ACGTTAGCCTTGTCACAACA+TGG 0.569415 8:-87204224 None:intergenic
ATCAGGATCCTCAAACTCAT+GGG 0.570771 8:+87205597 MsG0880047500.01.T01:CDS
GACAAGGCTAACGTGAAGAA+AGG 0.571971 8:+87204233 MsG0880047500.01.T01:CDS
AGGATCAAAACTTGATATGG+TGG 0.573580 8:+87205551 MsG0880047500.01.T01:CDS
TTCACAGGGCTCAAGAGATG+TGG 0.576710 8:+87204629 MsG0880047500.01.T01:intron
TAACAGAAATATAATTACAC+TGG 0.576922 8:+87205468 MsG0880047500.01.T01:CDS
TTCAGAGATATGAATAACAA+TGG 0.582081 8:+87205523 MsG0880047500.01.T01:CDS
CTAACGTGAAGAAAGGACCT+TGG 0.601182 8:+87204240 MsG0880047500.01.T01:CDS
GAAAGAGTTGCAGACTTAGG+TGG 0.603750 8:+87204651 MsG0880047500.01.T01:CDS
ATTGAAACAAATGGAACTGG+AGG 0.607543 8:+87204296 MsG0880047500.01.T01:CDS
CATTCAAGTGTTGCACCAAG+AGG 0.626324 8:+87205373 MsG0880047500.01.T01:CDS
TAGAGCTCCATGTTGTGACA+AGG 0.654472 8:+87204217 MsG0880047500.01.T01:CDS
TTGGCCAAAGTAGTGCAGCA+GGG 0.664453 8:-87205159 None:intergenic
GCATCTTCTTCAGGAGACCA+AGG 0.668102 8:-87204257 None:intergenic
GTCTCCAAAAGATCAACCTG+TGG 0.671421 8:-87205268 None:intergenic
TTGAGACCTAATATCAAACA+TGG 0.684201 8:+87204683 MsG0880047500.01.T01:CDS
AGACCTAATATCAAACATGG+TGG 0.691846 8:+87204686 MsG0880047500.01.T01:CDS
ACTGGAAGATGAATATCGTG+TGG 0.783497 8:+87205486 MsG0880047500.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATTATTTATCTCTTTG+TGG + Chr8:87204425-87204444 MsG0880047500.01.T01:intron 15.0%
!! AATTGTATCTATATAACTAT+AGG + Chr8:87204879-87204898 MsG0880047500.01.T01:intron 15.0%
!! ATAATTACAAAAAATTCACA+GGG + Chr8:87204615-87204634 MsG0880047500.01.T01:intron 15.0%
!! TATTATTGTAAAAAGACAAA+GGG - Chr8:87205138-87205157 None:intergenic 15.0%
!! TTATTATTGTAAAAAGACAA+AGG - Chr8:87205139-87205158 None:intergenic 15.0%
!! ATTAGTGCAAACTAATTAAT+GGG + Chr8:87204592-87204611 MsG0880047500.01.T01:intron 20.0%
!! GATAATTACAAAAAATTCAC+AGG + Chr8:87204614-87204633 MsG0880047500.01.T01:intron 20.0%
!! TAACAGAAATATAATTACAC+TGG + Chr8:87205468-87205487 MsG0880047500.01.T01:CDS 20.0%
!!! AAGTAATTACCAATTTTTTG+AGG - Chr8:87204338-87204357 None:intergenic 20.0%
! AAATCCTACATTGAAACAAA+TGG + Chr8:87204287-87204306 MsG0880047500.01.T01:CDS 25.0%
! ACAATGACATCAAAAACTAT+TGG + Chr8:87204939-87204958 MsG0880047500.01.T01:CDS 25.0%
! AGATTGAAGAAGAAATTACT+TGG + Chr8:87204968-87204987 MsG0880047500.01.T01:CDS 25.0%
! GATTAGTGCAAACTAATTAA+TGG + Chr8:87204591-87204610 MsG0880047500.01.T01:intron 25.0%
! TATGAATAACAATGGTTCAA+AGG + Chr8:87205531-87205550 MsG0880047500.01.T01:CDS 25.0%
! TGTATCTATATAACTATAGG+TGG + Chr8:87204882-87204901 MsG0880047500.01.T01:intron 25.0%
! TTCAGAGATATGAATAACAA+TGG + Chr8:87205523-87205542 MsG0880047500.01.T01:CDS 25.0%
!!! TCTATCTCTAGTTTTGTATT+TGG + Chr8:87204545-87204564 MsG0880047500.01.T01:intron 25.0%
AATCCACCATGTTTGATATT+AGG - Chr8:87204692-87204711 None:intergenic 30.0%
AGTTCCATTTGTTTCAATGT+AGG - Chr8:87204294-87204313 None:intergenic 30.0%
ATGAATCAAAAGGACACAAA+TGG + Chr8:87205025-87205044 MsG0880047500.01.T01:CDS 30.0%
ATGTTCCAAGATTATGAACT+AGG + Chr8:87205649-87205668 MsG0880047500.01.T01:CDS 30.0%
ATTGCTCTTCCTCAAAAAAT+TGG + Chr8:87204326-87204345 MsG0880047500.01.T01:CDS 30.0%
CAAAGGATCAAAACTTGATA+TGG + Chr8:87205548-87205567 MsG0880047500.01.T01:CDS 30.0%
CAACAACTTGATGAATCAAA+AGG + Chr8:87205015-87205034 MsG0880047500.01.T01:CDS 30.0%
CAACTAATCTTATGCAAGAA+GGG + Chr8:87205626-87205645 MsG0880047500.01.T01:CDS 30.0%
CAAGATTATGAACTAGGTTA+TGG + Chr8:87205655-87205674 MsG0880047500.01.T01:CDS 30.0%
CATAACCTAGTTCATAATCT+TGG - Chr8:87205657-87205676 None:intergenic 30.0%
GAGAAGAAACAATTCTAACA+TGG - Chr8:87204846-87204865 None:intergenic 30.0%
TACATTGAAACAAATGGAAC+TGG + Chr8:87204293-87204312 MsG0880047500.01.T01:CDS 30.0%
TACTAACAATGAAGGAATTC+AGG + Chr8:87205414-87205433 MsG0880047500.01.T01:CDS 30.0%
TCAACTAATCTTATGCAAGA+AGG + Chr8:87205625-87205644 MsG0880047500.01.T01:CDS 30.0%
TTGAGACCTAATATCAAACA+TGG + Chr8:87204683-87204702 MsG0880047500.01.T01:CDS 30.0%
TTTGGAGACTATTATTCCTT+TGG + Chr8:87205282-87205301 MsG0880047500.01.T01:CDS 30.0%
! ATATGTATGTATTGATCACG+AGG + Chr8:87204401-87204420 MsG0880047500.01.T01:intron 30.0%
!! GAAGTATTGTTATTCTCCAA+AGG - Chr8:87205301-87205320 None:intergenic 30.0%
!! GGTTGTTATTAGAGTTTTGA+AGG - Chr8:87205222-87205241 None:intergenic 30.0%
!!! ACCTCTTGTACTTTTTTCAT+CGG + Chr8:87204455-87204474 MsG0880047500.01.T01:intron 30.0%
!!! TAGAGTTTTGAAGGCTAATT+TGG - Chr8:87205213-87205232 None:intergenic 30.0%
!!! TGGATCATTTTTTCTTGAGA+AGG - Chr8:87205193-87205212 None:intergenic 30.0%
ACAGTAGTATGTTGTAGAGA+TGG - Chr8:87204793-87204812 None:intergenic 35.0%
AGACCTAATATCAAACATGG+TGG + Chr8:87204686-87204705 MsG0880047500.01.T01:CDS 35.0%
AGGATCAAAACTTGATATGG+TGG + Chr8:87205551-87205570 MsG0880047500.01.T01:CDS 35.0%
ATATGGTGGTCAAATGATTC+AGG + Chr8:87205565-87205584 MsG0880047500.01.T01:CDS 35.0%
ATTGAAACAAATGGAACTGG+AGG + Chr8:87204296-87204315 MsG0880047500.01.T01:CDS 35.0%
GAGAAATTTGAGGATAGACA+AGG - Chr8:87204771-87204790 None:intergenic 35.0%
GATTCAGGTGATACTAAATC+AGG + Chr8:87205580-87205599 MsG0880047500.01.T01:CDS 35.0%
TGCTTCCAATGCTTATGTAA+AGG - Chr8:87204745-87204764 None:intergenic 35.0%
TGTAGAGATGGAGAAATTTG+AGG - Chr8:87204781-87204800 None:intergenic 35.0%
!! AGAAAGCACTTTGCATCATA+GGG - Chr8:87205243-87205262 None:intergenic 35.0%
!! GAGAAGAGTACTAACAATGA+AGG + Chr8:87205406-87205425 MsG0880047500.01.T01:CDS 35.0%
!! TTTACATAAGCATTGGAAGC+AGG + Chr8:87204744-87204763 MsG0880047500.01.T01:CDS 35.0%
!!! CCTCTTGTACTTTTTTCATC+GGG + Chr8:87204456-87204475 MsG0880047500.01.T01:intron 35.0%
!!! CTCTTGTACTTTTTTCATCG+GGG + Chr8:87204457-87204476 MsG0880047500.01.T01:intron 35.0%
AATCAGGATCCTCAAACTCA+TGG + Chr8:87205596-87205615 MsG0880047500.01.T01:CDS 40.0%
ACTGGAAGATGAATATCGTG+TGG + Chr8:87205486-87205505 MsG0880047500.01.T01:CDS 40.0%
AGGTAACTGAGCAGCAATAA+TGG - Chr8:87204909-87204928 None:intergenic 40.0%
ATCAGGATCCTCAAACTCAT+GGG + Chr8:87205597-87205616 MsG0880047500.01.T01:CDS 40.0%
ATGTCATTGTCTGTTCTTCC+AGG - Chr8:87204929-87204948 None:intergenic 40.0%
ATTATTGCTGCTCAGTTACC+TGG + Chr8:87204908-87204927 MsG0880047500.01.T01:CDS 40.0%
CAAATGGAACTGGAGGAAAT+TGG + Chr8:87204303-87204322 MsG0880047500.01.T01:CDS 40.0%
CAATGAAGGAATTCAGGAAC+TGG + Chr8:87205420-87205439 MsG0880047500.01.T01:CDS 40.0%
TCAGTTACCTTCAATGCTTC+TGG + Chr8:87205319-87205338 MsG0880047500.01.T01:CDS 40.0%
TCTTGAGAAGGATGCAACTT+TGG - Chr8:87205181-87205200 None:intergenic 40.0%
TGATGAATCCCATGAGTTTG+AGG - Chr8:87205608-87205627 None:intergenic 40.0%
TGCAGCCTTTACATAAGCAT+TGG + Chr8:87204737-87204756 MsG0880047500.01.T01:CDS 40.0%
TTGAGTGTAGCATCTTCTTC+AGG - Chr8:87204269-87204288 None:intergenic 40.0%
! CCCGATGAAAAAAGTACAAG+AGG - Chr8:87204459-87204478 None:intergenic 40.0%
!! GAGAAAGCACTTTGCATCAT+AGG - Chr8:87205244-87205263 None:intergenic 40.0%
!! GCTATTTCCAGAAGCATTGA+AGG - Chr8:87205329-87205348 None:intergenic 40.0%
!!! TTCACCACAGGTTGATCTTT+TGG + Chr8:87205264-87205283 MsG0880047500.01.T01:CDS 40.0%
AAGTGCTTTCTCTTCACCAC+AGG + Chr8:87205252-87205271 MsG0880047500.01.T01:CDS 45.0%
ATAACCCTGCTGCACTACTT+TGG + Chr8:87205155-87205174 MsG0880047500.01.T01:CDS 45.0%
CTAACGTGAAGAAAGGACCT+TGG + Chr8:87204240-87204259 MsG0880047500.01.T01:CDS 45.0%
GAAAGAGTTGCAGACTTAGG+TGG + Chr8:87204651-87204670 MsG0880047500.01.T01:CDS 45.0%
GACAAGGCTAACGTGAAGAA+AGG + Chr8:87204233-87204252 MsG0880047500.01.T01:CDS 45.0%
GTCTCCAAAAGATCAACCTG+TGG - Chr8:87205271-87205290 None:intergenic 45.0%
GTGGAAAGAGTTGCAGACTT+AGG + Chr8:87204648-87204667 MsG0880047500.01.T01:CDS 45.0%
TAGAGCTCCATGTTGTGACA+AGG + Chr8:87204217-87204236 MsG0880047500.01.T01:CDS 45.0%
TTCTCAACAGCTTCTCCTCT+TGG - Chr8:87205391-87205410 None:intergenic 45.0%
! CATTCAAGTGTTGCACCAAG+AGG + Chr8:87205373-87205392 MsG0880047500.01.T01:CDS 45.0%
!! ACGTTAGCCTTGTCACAACA+TGG - Chr8:87204227-87204246 None:intergenic 45.0%
GCATCTTCTTCAGGAGACCA+AGG - Chr8:87204260-87204279 None:intergenic 50.0%
TTCACAGGGCTCAAGAGATG+TGG + Chr8:87204629-87204648 MsG0880047500.01.T01:intron 50.0%
TTGGCCAAAGTAGTGCAGCA+GGG - Chr8:87205162-87205181 None:intergenic 50.0%
TTTGGCCAAAGTAGTGCAGC+AGG - Chr8:87205163-87205182 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
Chr8 gene 87204212 87205684 87204212 ID=MsG0880047500.01;Name=MsG0880047500.01
Chr8 mRNA 87204212 87205684 87204212 ID=MsG0880047500.01.T01;Parent=MsG0880047500.01;Name=MsG0880047500.01.T01;_AED=0.23;_eAED=0.27;_QI=0|0|0|1|1|1|3|0|349
Chr8 exon 87204212 87204347 87204212 ID=MsG0880047500.01.T01:exon:18037;Parent=MsG0880047500.01.T01
Chr8 exon 87204636 87204765 87204636 ID=MsG0880047500.01.T01:exon:18038;Parent=MsG0880047500.01.T01
Chr8 exon 87204901 87205684 87204901 ID=MsG0880047500.01.T01:exon:18039;Parent=MsG0880047500.01.T01
Chr8 CDS 87204212 87204347 87204212 ID=MsG0880047500.01.T01:cds;Parent=MsG0880047500.01.T01
Chr8 CDS 87204636 87204765 87204636 ID=MsG0880047500.01.T01:cds;Parent=MsG0880047500.01.T01
Chr8 CDS 87204901 87205684 87204901 ID=MsG0880047500.01.T01:cds;Parent=MsG0880047500.01.T01
Gene Sequence

>MsG0880047500.01.T01

ATGGGTAGAGCTCCATGTTGTGACAAGGCTAACGTGAAGAAAGGACCTTGGTCTCCTGAAGAAGATGCTACACTCAAATCCTACATTGAAACAAATGGAACTGGAGGAAATTGGATTGCTCTTCCTCAAAAAATTGGGCTCAAGAGATGTGGAAAGAGTTGCAGACTTAGGTGGTTAAATTACTTGAGACCTAATATCAAACATGGTGGATTTACTGAAGAAGAAGACAACATCATTTGCAGCCTTTACATAAGCATTGGAAGCAGGTGGTCCATTATTGCTGCTCAGTTACCTGGAAGAACAGACAATGACATCAAAAACTATTGGAACACAAGATTGAAGAAGAAATTACTTGGAAAGCGAAAACAAACGAATAACAACAACAACTTGATGAATCAAAAGGACACAAATGGAATAGATGATAATTCTTATTCAAATTCATTAAGTAGCTCAGCTCTTGAGAGACTTCAACTTCATATGCAACTTCAAAGTCTTCAAAACCCTTTGTCTTTTTACAATAATAACCCTGCTGCACTACTTTGGCCAAAGTTGCATCCTTCTCAAGAAAAAATGATCCAAATTAGCCTTCAAAACTCTAATAACAACCCTATGATGCAAAGTGCTTTCTCTTCACCACAGGTTGATCTTTTGGAGACTATTATTCCTTTGGAGAATAACAATACTTCAGTTACCTTCAATGCTTCTGGAAATAGCAGTAATAATAATAATTCAATCATGCATTCAAGTGTTGCACCAAGAGGAGAAGCTGTTGAGAAGAGTACTAACAATGAAGGAATTCAGGAACTGGAAAGTGAACTAGATGAAATTCTCAATAACAGAAATATAATTACACTGGAAGATGAATATCGTGTGGCTGAATTTGATTGTTTCAGAGATATGAATAACAATGGTTCAAAGGATCAAAACTTGATATGGTGGTCAAATGATTCAGGTGATACTAAATCAGGATCCTCAAACTCATGGGATTCATCAACTAATCTTATGCAAGAAGGGATGTTCCAAGATTATGAACTAGGTTATGGTCTGTAG

Protein sequence

>MsG0880047500.01.T01

MGRAPCCDKANVKKGPWSPEEDATLKSYIETNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGKRKQTNNNNNLMNQKDTNGIDDNSYSNSLSSSALERLQLHMQLQSLQNPLSFYNNNPAALLWPKLHPSQEKMIQISLQNSNNNPMMQSAFSSPQVDLLETIIPLENNNTSVTFNASGNSSNNNNSIMHSSVAPRGEAVEKSTNNEGIQELESELDEILNNRNIITLEDEYRVAEFDCFRDMNNNGSKDQNLIWWSNDSGDTKSGSSNSWDSSTNLMQEGMFQDYELGYGL*